Pregenerated sensors for FGB (Mus musculus)
Ensembl gene IDs: ENSMUSG00000033831Ensembl transcript IDs: ENSMUST00000048246.5
Found 116 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ACACAGGAATGCAGATGGCTCCTTAAGACCTTAACGTCACGTGTTTaGGCATGGTTTTTCAGGAGTGGGATGGTTGGATCACCAAATCAG | + |
|
Preference number: 1 (lower is better) Translates to: TQECRWLLKTLTSRV*AWFFRSGMVGSPNQ Trigger: CTGATTTGGTGATCCAACCATCCCACTCCTGAAAAACCATGCCCAAACACGTGACGTTAAGGTCTTAAGGAGCCATCTGCATTCCTGTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048246.5 |
||
| 3UTR CCA 90 bp | TCTGGCCTTGTTGTCTTCTTGGAAGGTAGAGCAGTTGCTTTCCCATaGAACAGCAGAACATTTGACACTTCAAATGGCTCACTAGACATT | + |
|
Preference number: 1 (lower is better) Translates to: SGLVVFLEGRAVAFP*NSRTFDTSNGSLDI Trigger: AATGTCTAGTGAGCCATTTGAAGTGTCAAATGTTCTGCTGTTCCATGGGAAAGCAACTGCTCTACCTTCCAAGAAGACAACAAGGCCAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048246.5 |
||
| 3UTR TCA 90 bp | GCACTTAAAAATGACCTCGTGGCAAGTGTTGGTACTGTAAGACAATaGAACAAACAAATAAACAAAGGGGCACTAGAGAGTTTAGGAGGT | + |
|
Preference number: 1 (lower is better) Translates to: ALKNDLVASVGTVRQ*NKQINKGALESLGG Trigger: ACCTCCTAAACTCTCTAGTGCCCCTTTGTTTATTTGTTTGTTTCATTGTCTTACAGTACCAACACTTGCCACGAGGTCATTTTTAAGTGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048246.5 |
||
| 3UTR-3UTR TCA 90 bp | AGCAGGGCAGGAACACTGACTGAGCTGGGGCTCGCCGAAGAAGTAAGGGTTGCACTGACTTCCCTTCCCTaGAACCACATCAGGAGGCTC | + |
|
Preference number: 2 (lower is better) Translates to: SRAGTLTELGLAEEVRVALTSLP*NHIRRL Trigger: GAGCCTCCTGATGTGGTTTCAGGGAAGGGAAGTCAG...TGCAACCCTTACTTCTTCGGCGAGCCCCAGCTCAGTCAGTGTTCCTGCCCTGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048246.5 |
||
| 3UTR-3UTR TCA 90 bp | TGTTTGGGCATGGTTTTTCAGGAGTGGGATGGTTGGATCACCAAATCAGTTCTGGGCAGGAACACTGACTaGGCTGGGGCTCGCCGAAGA | + |
|
Preference number: 2 (lower is better) Translates to: CLGMVFQEWDGWITKSVLGRNTD*AGARRR Trigger: TCTTCGGCGAGCCCCAGCTCAGTCAGTGTTCCTGCC...CAGAACTGATTTGGTGATCCAACCATCCCACTCCTGAAAAACCATGCCCAAACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048246.5 |
||
| 3UTR-3UTR GCA 90 bp | CACGTGTTTGGGCATGGTTTTTCAGGAGTGGGATGGTTGGATCACCAAATCAGTGGACTCAGGACACTGTaGAGTGCACACAGGCAGCCA | + |
|
Preference number: 2 (lower is better) Translates to: HVFGHGFSGVGWLDHQISGLRTL*SAHRQP Trigger: TGGCTGCCTGTGTGCACTGCACAGTGTCCTGAGTCC...ACTGATTTGGTGATCCAACCATCCCACTCCTGAAAAACCATGCCCAAACACGTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048246.5 |
||
| 3UTR-3UTR GCA 90 bp | CACGTGTTTGGGCATGGTTTTTCAGGAGTGGGATGGTTGGATCACCAAATCAGTCAGGACACTGTGCAGTaGACACAGGCAGCCATGACA | + |
|
Preference number: 2 (lower is better) Translates to: HVFGHGFSGVGWLDHQISQDTVQ*TQAAMT Trigger: TGTCATGGCTGCCTGTGTGCACTGCACAGTGTCCTG...ACTGATTTGGTGATCCAACCATCCCACTCCTGAAAAACCATGCCCAAACACGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048246.5 |
||
| 3UTR-3UTR CCA 90 bp | CACGTGTTTGGGCATGGTTTTTCAGGAGTGGGATGGTTGGATCACCAAATCAGTTTGCAGGGGGTGCCATaGGGAGAGGTAGAAAGGACA | + |
|
Preference number: 2 (lower is better) Translates to: HVFGHGFSGVGWLDHQISLQGVP*GEVERT Trigger: TGTCCTTTCTACCTCTCCCCATGGCACCCCCTGCAA...ACTGATTTGGTGATCCAACCATCCCACTCCTGAAAAACCATGCCCAAACACGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000048246.5 |
||
| 3UTR-3UTR TCA 90 bp | TGTTTGGGCATGGTTTTTCAGGAGTGGGATGGTTGGATCACCAAATCAGTTCTGACAAGGCCATGTGGGTaGGGGGCATGTTTGTGCATG | + |
|
Preference number: 2 (lower is better) Translates to: CLGMVFQEWDGWITKSVLTRPCG*GACLCM Trigger: CATGCACAAACATGCCCCTCACCCACATGGCCTTGT...CAGAACTGATTTGGTGATCCAACCATCCCACTCCTGAAAAACCATGCCCAAACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000048246.5 |
||
| 3UTR-3UTR GCA 90 bp | GTGTGGTATAGACTGTCCAATAGACAGAATCCATGGCTACAAGGCCAGGCAAAAGCTCCTGCACTTGTGTaGATGGATCCACACGTGCTC | + |
|
Preference number: 2 (lower is better) Translates to: VWYRLSNRQNPWLQGQAKAPALV*MDPHVL Trigger: GAGCACGTGTGGATCCATGCACACAAGTGCAGGAGC...TTTTGCCTGGCCTTGTAGCCATGGATTCTGTCTATTGGACAGTCTATACCACAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048246.5 |
||
| 3UTR-3UTR GCA 90 bp | GTGTGGTATAGACTGTCCAATAGACAGAATCCATGGCTACAAGGCCAGGCAAAAGACCCCTCTGGTTTCTaGAGGCTCCTGCACTTGTGT | + |
|
Preference number: 2 (lower is better) Translates to: VWYRLSNRQNPWLQGQAKDPSGF*RLLHLC Trigger: ACACAAGTGCAGGAGCCTGCAGAAACCAGAGGGGTC...TTTTGCCTGGCCTTGTAGCCATGGATTCTGTCTATTGGACAGTCTATACCACAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048246.5 |
||
| 3UTR-3UTR TCA 90 bp | GTGTGGTATAGACTGTCCAATAGACAGAATCCATGGCTACAAGGCCAGGCAAAAAGCTCTGGGAAAATCTaGCCCCTCTGGTTTCTGCAG | + |
|
Preference number: 2 (lower is better) Translates to: VWYRLSNRQNPWLQGQAKSSGKI*PLWFLQ Trigger: CTGCAGAAACCAGAGGGGTCAGATTTTCCCAGAGCT...TTTTGCCTGGCCTTGTAGCCATGGATTCTGTCTATTGGACAGTCTATACCACAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000048246.5 |
||
| 3UTR-3UTR TCA 90 bp | CACGTGTTTGGGCATGGTTTTTCAGGAGTGGGATGGTTGGATCACCAAATCAGTATAGCAAGTGTGGGATaGAGTAGGGGAGAAGGGGAA | + |
|
Preference number: 2 (lower is better) Translates to: HVFGHGFSGVGWLDHQISIASVG*SRGEGE Trigger: TTCCCCTTCTCCCCTACTTCATCCCACACTTGCTAT...ACTGATTTGGTGATCCAACCATCCCACTCCTGAAAAACCATGCCCAAACACGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000048246.5 |
||
| 3UTR-3UTR GCA 90 bp | GTGTGGTATAGACTGTCCAATAGACAGAATCCATGGCTACAAGGCCAGGCAAAAGTTTCTGCAGGCTCCTaGACTTGTGTGCATGGATCC | + |
|
Preference number: 2 (lower is better) Translates to: VWYRLSNRQNPWLQGQAKVSAGS*TCVHGS Trigger: GGATCCATGCACACAAGTGCAGGAGCCTGCAGAAAC...TTTTGCCTGGCCTTGTAGCCATGGATTCTGTCTATTGGACAGTCTATACCACAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048246.5 |
||
| 3UTR-3UTR TCA 90 bp | CACGTGTTTGGGCATGGTTTTTCAGGAGTGGGATGGTTGGATCACCAAATCAGTTCTCCAGGAAGCACATaGCAAGGGCTTCATCTAATG | + |
|
Preference number: 2 (lower is better) Translates to: HVFGHGFSGVGWLDHQISSPGST*QGLHLM Trigger: CATTAGATGAAGCCCTTGTCATGTGCTTCCTGGAGA...ACTGATTTGGTGATCCAACCATCCCACTCCTGAAAAACCATGCCCAAACACGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048246.5 |
||
| 3UTR-3UTR TCA 90 bp | GATAAAGTAGAAGATATCAGCATGTGTGGTATAGACTGTCCAATAGACAGAATCGCACACAGGCAGCCATaGCAACAGCAGGGCAGGAAC | + |
|
Preference number: 2 (lower is better) Translates to: DKVEDISMCGIDCPIDRIAHRQP*QQQGRN Trigger: GTTCCTGCCCTGCTGTTGTCATGGCTGCCTGTGTGC...GATTCTGTCTATTGGACAGTCTATACCACACATGCTGATATCTTCTACTTTATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048246.5 |
||
| 3UTR-3UTR CCA 90 bp | CACGTGTTTGGGCATGGTTTTTCAGGAGTGGGATGGTTGGATCACCAAATCAGTGCAGTTGCTTTCCCATaGAACAGCAGAACATTTGAC | + |
|
Preference number: 2 (lower is better) Translates to: HVFGHGFSGVGWLDHQISAVAFP*NSRTFD Trigger: GTCAAATGTTCTGCTGTTCCATGGGAAAGCAACTGC...ACTGATTTGGTGATCCAACCATCCCACTCCTGAAAAACCATGCCCAAACACGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048246.5 |
||
| 3UTR-3UTR CCA 90 bp | CACGTGTTTGGGCATGGTTTTTCAGGAGTGGGATGGTTGGATCACCAAATCAGTAGCAGGAGACAGTCATaGGAGCCATTCATGATCATT | + |
|
Preference number: 2 (lower is better) Translates to: HVFGHGFSGVGWLDHQISSRRQS*EPFMII Trigger: AATGATCATGAATGGCTCCCATGACTGTCTCCTGCT...ACTGATTTGGTGATCCAACCATCCCACTCCTGAAAAACCATGCCCAAACACGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048246.5 |
||
| 3UTR-3UTR GCA 90 bp | TGTTTGGGCATGGTTTTTCAGGAGTGGGATGGTTGGATCACCAAATCAGTTCTGGTGCTTAGCCTGAAATaGTCCACATTCAGATGGAAC | + |
|
Preference number: 2 (lower is better) Translates to: CLGMVFQEWDGWITKSVLVLSLK*STFRWN Trigger: GTTCCATCTGAATGTGGAGCATTTCAGGCTAAGCAC...CAGAACTGATTTGGTGATCCAACCATCCCACTCCTGAAAAACCATGCCCAAACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048246.5 |
||
| 3UTR-3UTR GCA 90 bp | GATAAAGTAGAAGATATCAGCATGTGTGGTATAGACTGTCCAATAGACAGAATCCGAAGAAGTAAGGGTTaGAGGGGGTGCCATGGGGAG | + |
|
Preference number: 2 (lower is better) Translates to: DKVEDISMCGIDCPIDRIRRSKG*RGCHGE Trigger: CTCCCCATGGCACCCCCTGCAACCCTTACTTCTTCG...GATTCTGTCTATTGGACAGTCTATACCACACATGCTGATATCTTCTACTTTATC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048246.5 |
||
| 3UTR-3UTR CCA 90 bp | GTGTGGTATAGACTGTCCAATAGACAGAATCCATGGCTACAAGGCCAGGCAAAAGCCTTGTTGTCTTCTTaGAAGGTAGAGCAGTTGCTT | + |
|
Preference number: 2 (lower is better) Translates to: VWYRLSNRQNPWLQGQAKALLSS*KVEQLL Trigger: AAGCAACTGCTCTACCTTCCAAGAAGACAACAAGGC...TTTTGCCTGGCCTTGTAGCCATGGATTCTGTCTATTGGACAGTCTATACCACAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048246.5 |
||
| 3UTR-3UTR TCA 90 bp | CACGTGTTTGGGCATGGTTTTTCAGGAGTGGGATGGTTGGATCACCAAATCAGTGATTTGGGTTTAGTGTaGTTAATGCAAACACATGGA | + |
|
Preference number: 2 (lower is better) Translates to: HVFGHGFSGVGWLDHQISDLGLV*LMQTHG Trigger: TCCATGTGTTTGCATTAATCACACTAAACCCAAATC...ACTGATTTGGTGATCCAACCATCCCACTCCTGAAAAACCATGCCCAAACACGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048246.5 |
||
| 3UTR-3UTR TCA 90 bp | TGTTTGGGCATGGTTTTTCAGGAGTGGGATGGTTGGATCACCAAATCAGTTCTGGGCTCACTAGACATTTaGAATTGTAAATACCTTCCT | + |
|
Preference number: 2 (lower is better) Translates to: CLGMVFQEWDGWITKSVLGSLDI*NCKYLP Trigger: AGGAAGGTATTTACAATTTCAAATGTCTAGTGAGCC...CAGAACTGATTTGGTGATCCAACCATCCCACTCCTGAAAAACCATGCCCAAACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048246.5 |
||
| 3UTR-3UTR CCA 90 bp | TGTTTGGGCATGGTTTTTCAGGAGTGGGATGGTTGGATCACCAAATCAGTTCTGAACAGTAATTTACAATaGCAGAGATGGGCTTATGTA | + |
|
Preference number: 2 (lower is better) Translates to: CLGMVFQEWDGWITKSVLNSNLQ*QRWAYV Trigger: TACATAAGCCCATCTCTGCCATTGTAAATTACTGTT...CAGAACTGATTTGGTGATCCAACCATCCCACTCCTGAAAAACCATGCCCAAACA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048246.5 |
||
| 3UTR-3UTR CCA 90 bp | GATAAAGTAGAAGATATCAGCATGTGTGGTATAGACTGTCCAATAGACAGAATCTGCTCCACATTCAGATaGAACCAACCAACCATTTAT | + |
|
Preference number: 2 (lower is better) Translates to: DKVEDISMCGIDCPIDRICSTFR*NQPTIY Trigger: ATAAATGGTTGGTTGGTTCCATCTGAATGTGGAGCA...GATTCTGTCTATTGGACAGTCTATACCACACATGCTGATATCTTCTACTTTATC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048246.5 |
||
| 3UTR-3UTR CAA 90 bp | AGCAGGGCAGGAACACTGACTGAGCTGGGGCTCGCCGAAGAAGTAAGGGTTGCATGGAAGGTAGAGCAGTaGCTTTCCCATGGAACAGCA | + |
|
Preference number: 3 (lower is better) Translates to: SRAGTLTELGLAEEVRVAWKVEQ*LSHGTA Trigger: TGCTGTTCCATGGGAAAGCAACTGCTCTACCTTCCA...TGCAACCCTTACTTCTTCGGCGAGCCCCAGCTCAGTCAGTGTTCCTGCCCTGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048246.5 |
||
| 3UTR-3UTR CAA 90 bp | AGCAGGGCAGGAACACTGACTGAGCTGGGGCTCGCCGAAGAAGTAAGGGTTGCAGGCCTTGTTGTCTTCTaGGAAGGTAGAGCAGTTGCT | + |
|
Preference number: 3 (lower is better) Translates to: SRAGTLTELGLAEEVRVAGLVVF*EGRAVA Trigger: AGCAACTGCTCTACCTTCCAAGAAGACAACAAGGCC...TGCAACCCTTACTTCTTCGGCGAGCCCCAGCTCAGTCAGTGTTCCTGCCCTGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048246.5 |
||
| 3UTR GCA 72 bp | TGGGAAAATCTGACCCCTCTGGTTTCTGCAGGCTCCTaGACTTGTGTGCATGGATCCACACGTGCTCACATA | + |
|
Preference number: 3 (lower is better) Translates to: WENLTPLVSAGS*TCVHGSTRAHI Trigger: TATGTGAGCACGTGTGGATCCATGCACACAAGTGCAGGAGCCTGCAGAAACCAGAGGGGTCAGATTTTCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048246.5 |
||
| 3UTR TCA 72 bp | GGCCATGTGGGTGAGGGGCATGTTTGTGCATGCCTGTaGGCATATACGCAGTGTAGAGATTTGGGTTTAGTG | + |
|
Preference number: 3 (lower is better) Translates to: GHVGEGHVCACL*AYTQCRDLGLV Trigger: CACTAAACCCAAATCTCTACACTGCGTATATGCTCACAGGCATGCACAAACATGCCCCTCACCCACATGGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048246.5 |
||
| 3UTR TCA 72 bp | GTAGGGGAAACACACTGCTTGGCCTGGCCATTGAGGTaGACACAGGAATGCAGATGGCTCCTTAAGACCTTA | + |
|
Preference number: 3 (lower is better) Translates to: VGETHCLAWPLR*TQECRWLLKTL Trigger: TAAGGTCTTAAGGAGCCATCTGCATTCCTGTGTTCACCTCAATGGCCAGGCCAAGCAGTGTGTTTCCCCTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048246.5 |
||
| 3UTR CCA 72 bp | TGCAGATGGCTCCTTAAGACCTTAACGTCACGTGTTTaGGCATGGTTTTTCAGGAGTGGGATGGTTGGATCA | + |
|
Preference number: 3 (lower is better) Translates to: CRWLLKTLTSRV*AWFFRSGMVGS Trigger: TGATCCAACCATCCCACTCCTGAAAAACCATGCCCAAACACGTGACGTTAAGGTCTTAAGGAGCCATCTGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048246.5 |
||
| 3UTR CCA 72 bp | GAGGGGGTGCTTAGCCTGAAATGCTCCACATTCAGATaGAACCAACCAACCATTTATTACCATCCTTTTTGT | + |
|
Preference number: 3 (lower is better) Translates to: EGVLSLKCSTFR*NQPTIYYHPFC Trigger: ACAAAAAGGATGGTAATAAATGGTTGGTTGGTTCCATCTGAATGTGGAGCATTTCAGGCTAAGCACCCCCTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000048246.5 |
||
| 3UTR CCA 72 bp | CTTAACGTCACGTGTTTGGGCATGGTTTTTCAGGAGTaGGATGGTTGGATCACCAAATCAGTTCTGTTTTTC | + |
|
Preference number: 3 (lower is better) Translates to: LNVTCLGMVFQE*DGWITKSVLFF Trigger: GAAAAACAGAACTGATTTGGTGATCCAACCATCCCACTCCTGAAAAACCATGCCCAAACACGTGACGTTAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000048246.5 |
||
| 3UTR-3UTR CAA 90 bp | CACGTGTTTGGGCATGGTTTTTCAGGAGTGGGATGGTTGGATCACCAAATCAGTAGAGTTGGCTGTCTTTaGGATAAAGTAGAAGATATC | + |
|
Preference number: 3 (lower is better) Translates to: HVFGHGFSGVGWLDHQISRVGCL*DKVEDI Trigger: GATATCTTCTACTTTATCCAAAAGACAGCCAACTCT...ACTGATTTGGTGATCCAACCATCCCACTCCTGAAAAACCATGCCCAAACACGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048246.5 |
||
| 3UTR TCA 72 bp | TCCAAGAAGCAAATTAATCTTCACTTAAGTGAACGTTaGGAATCTGGGACTCAGGACACTGTGCAGTGCACA | + |
|
Preference number: 3 (lower is better) Translates to: SKKQINLHLSER*ESGTQDTVQCT Trigger: TGTGCACTGCACAGTGTCCTGAGTCCCAGATTCTCAACGTTCACTTAAGTGAAGATTAATTTGCTTCTTGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048246.5 |
||
| 3UTR CCA 72 bp | CGTCACGTGTTTGGGCATGGTTTTTCAGGAGTGGGATaGTTGGATCACCAAATCAGTTCTGTTTTTCATTTT | + |
|
Preference number: 3 (lower is better) Translates to: RHVFGHGFSGVG*LDHQISSVFHF Trigger: AAAATGAAAAACAGAACTGATTTGGTGATCCAACCATCCCACTCCTGAAAAACCATGCCCAAACACGTGACG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000048246.5 |
||
| 3UTR-3UTR CAA 90 bp | GATAAAGTAGAAGATATCAGCATGTGTGGTATAGACTGTCCAATAGACAGAATCGCTTGGACTCTGGCCTaGTTGTCTTCTTGGAAGGTA | + |
|
Preference number: 3 (lower is better) Translates to: DKVEDISMCGIDCPIDRIAWTLA*LSSWKV Trigger: TACCTTCCAAGAAGACAACAAGGCCAGAGTCCAAGC...GATTCTGTCTATTGGACAGTCTATACCACACATGCTGATATCTTCTACTTTATC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048246.5 |
||
| 3UTR-3UTR CAA 90 bp | GATAAAGTAGAAGATATCAGCATGTGTGGTATAGACTGTCCAATAGACAGAATCGGAACAGCAGAACATTaGACACTTCAAATGGCTCAC | + |
|
Preference number: 3 (lower is better) Translates to: DKVEDISMCGIDCPIDRIGTAEH*TLQMAH Trigger: GTGAGCCATTTGAAGTGTCAAATGTTCTGCTGTTCC...GATTCTGTCTATTGGACAGTCTATACCACACATGCTGATATCTTCTACTTTATC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048246.5 |
||
| CDS-3UTR TCA 90 bp | AGCAGGGCAGGAACACTGACTGAGCTGGGGCTCGCCGAAGAAGTAAGGGTTGCATTCTCCCCCACCAGTTaGGAGGCCCCGTCCATGAGG | + |
|
Preference number: 4 (lower is better) Translates to: SRAGTLTELGLAEEVRVAFSPTS*EAPSMR Trigger: CCTCATGGACGGGGCCTCTCAACTGGTGGGGGAGAA...TGCAACCCTTACTTCTTCGGCGAGCCCCAGCTCAGTCAGTGTTCCTGCCCTGCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000048246.5 |
||
| CDS-3UTR GCA 90 bp | AGCAGGGCAGGAACACTGACTGAGCTGGGGCTCGCCGAAGAAGTAAGGGTTGCACCATCATCTGTGCCGTaGTTGGACATGTCCCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SRAGTLTELGLAEEVRVAPSSVP*LDMSQL Trigger: CAGCTGGGACATGTCCAAGCACGGCACAGATGATGG...TGCAACCCTTACTTCTTCGGCGAGCCCCAGCTCAGTCAGTGTTCCTGCCCTGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048246.5 |
||
| CDS-3UTR TCA 90 bp | AGCAGGGCAGGAACACTGACTGAGCTGGGGCTCGCCGAAGAAGTAAGGGTTGCATCAGGTACTGAAAGGTaGCTGAGGAGGTATCGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: SRAGTLTELGLAEEVRVASGTER*LRRYRK Trigger: TTTCCGATACCTCCTCAGTCACCTTTCAGTACCTGA...TGCAACCCTTACTTCTTCGGCGAGCCCCAGCTCAGTCAGTGTTCCTGCCCTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048246.5 |
||
| CDS-3UTR CCA 90 bp | AGCAGGGCAGGAACACTGACTGAGCTGGGGCTCGCCGAAGAAGTAAGGGTTGCACCCATCCTGGTGAGCTaGCTAATCTTATCATTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: SRAGTLTELGLAEEVRVAPILVS*LILSLP Trigger: TGGCAATGATAAGATTAGCCAGCTCACCAGGATGGG...TGCAACCCTTACTTCTTCGGCGAGCCCCAGCTCAGTCAGTGTTCCTGCCCTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048246.5 |
||
| CDS-3UTR GCA 90 bp | AGCAGGGCAGGAACACTGACTGAGCTGGGGCTCGCCGAAGAAGTAAGGGTTGCAGCCATTTGGATTGGCTaGATGGCATCTGTTATACCA | + |
|
Preference number: 4 (lower is better) Translates to: SRAGTLTELGLAEEVRVAAIWIG*MASVIP Trigger: TGGTATAACAGATGCCATGCAGCCAATCCAAATGGC...TGCAACCCTTACTTCTTCGGCGAGCCCCAGCTCAGTCAGTGTTCCTGCCCTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048246.5 |
||
| CDS-3UTR CCA 90 bp | AGCAGGGCAGGAACACTGACTGAGCTGGGGCTCGCCGAAGAAGTAAGGGTTGCATTGTTCACTGAGACTTaGTATTTGCTGGCCTCGTTC | + |
|
Preference number: 4 (lower is better) Translates to: SRAGTLTELGLAEEVRVALFTET*YLLASF Trigger: GAACGAGGCCAGCAAATACCAAGTCTCAGTGAACAA...TGCAACCCTTACTTCTTCGGCGAGCCCCAGCTCAGTCAGTGTTCCTGCCCTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048246.5 |
||
| CDS-3UTR CCA 90 bp | AGCAGGGCAGGAACACTGACTGAGCTGGGGCTCGCCGAAGAAGTAAGGGTTGCAATCTGCCATTTGGATTaGCTGCATGGCATCTGTTAT | + |
|
Preference number: 4 (lower is better) Translates to: SRAGTLTELGLAEEVRVAICHLD*LHGICY Trigger: ATAACAGATGCCATGCAGCCAATCCAAATGGCAGAT...TGCAACCCTTACTTCTTCGGCGAGCCCCAGCTCAGTCAGTGTTCCTGCCCTGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048246.5 |
||
| CDS-3UTR TCA 90 bp | AGCAGGGCAGGAACACTGACTGAGCTGGGGCTCGCCGAAGAAGTAAGGGTTGCATTTGTATTTGTTCACTaGGACTTGGTATTTGCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: SRAGTLTELGLAEEVRVAFVFVH*DLVFAG Trigger: GCCAGCAAATACCAAGTCTCAGTGAACAAATACAAA...TGCAACCCTTACTTCTTCGGCGAGCCCCAGCTCAGTCAGTGTTCCTGCCCTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048246.5 |
||
| 3UTR CAA 72 bp | CTAATGGCTTGCTTGGACTCTGGCCTTGTTGTCTTCTaGGAAGGTAGAGCAGTTGCTTTCCCATGGAACAGC | + |
|
Preference number: 4 (lower is better) Translates to: LMACLDSGLVVF*EGRAVAFPWNS Trigger: GCTGTTCCATGGGAAAGCAACTGCTCTACCTTCCAAGAAGACAACAAGGCCAGAGTCCAAGCAAGCCATTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048246.5 |
||
| CDS-3UTR GCA 90 bp | GTGTGGTATAGACTGTCCAATAGACAGAATCCATGGCTACAAGGCCAGGCAAAATGCCAAAGTCGACGCTaGCATCCTGACGGTTCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: VWYRLSNRQNPWLQGQAKCQSRR*HPDGSV Trigger: TACAGAACCGTCAGGATGGCAGCGTCGACTTTGGCA...TTTTGCCTGGCCTTGTAGCCATGGATTCTGTCTATTGGACAGTCTATACCACAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048246.5 |
||
| CDS-3UTR CCA 90 bp | GTGTGGTATAGACTGTCCAATAGACAGAATCCATGGCTACAAGGCCAGGCAAAAGCAGCTGACAGTGCATaGAGTGCGGCAGTATTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: VWYRLSNRQNPWLQGQAKAADSA*SAAVFH Trigger: ATGGAATACTGCCGCACTCCATGCACTGTCAGCTGC...TTTTGCCTGGCCTTGTAGCCATGGATTCTGTCTATTGGACAGTCTATACCACAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048246.5 |
||
| CDS-3UTR TCA 90 bp | CACGTGTTTGGGCATGGTTTTTCAGGAGTGGGATGGTTGGATCACCAAATCAGTCGGCAGTATTCCATTTaGGCTGAGATGTCAGACTCT | + |
|
Preference number: 4 (lower is better) Translates to: HVFGHGFSGVGWLDHQISRQYSI*AEMSDS Trigger: AGAGTCTGACATCTCAGCTCAAATGGAATACTGCCG...ACTGATTTGGTGATCCAACCATCCCACTCCTGAAAAACCATGCCCAAACACGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048246.5 |
||
| CDS-3UTR TCA 90 bp | TGTTTGGGCATGGTTTTTCAGGAGTGGGATGGTTGGATCACCAAATCAGTTCTGCCTGACGGTTCTGTATaGCTGTCCATCCTCCGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: CLGMVFQEWDGWITKSVLPDGSV*LSILRF Trigger: AAAACGGAGGATGGACAGTCATACAGAACCGTCAGG...CAGAACTGATTTGGTGATCCAACCATCCCACTCCTGAAAAACCATGCCCAAACA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048246.5 |
||
| CDS-3UTR TCA 90 bp | CACGTGTTTGGGCATGGTTTTTCAGGAGTGGGATGGTTGGATCACCAAATCAGTAGTCCTCCATTTCAATaGGAAGTTCTGTGGGTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: HVFGHGFSGVGWLDHQISSPPFQ*EVLWVP Trigger: TGGGACCCACAGAACTTCTCATTGAAATGGAGGACT...ACTGATTTGGTGATCCAACCATCCCACTCCTGAAAAACCATGCCCAAACACGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048246.5 |
||
| CDS-3UTR GCA 90 bp | CACGTGTTTGGGCATGGTTTTTCAGGAGTGGGATGGTTGGATCACCAAATCAGTCACCCCAGTAGTATCTaGCATTTGGATTGGCTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: HVFGHGFSGVGWLDHQISHPSSI*HLDWLH Trigger: ATGCAGCCAATCCAAATGGCAGATACTACTGGGGTG...ACTGATTTGGTGATCCAACCATCCCACTCCTGAAAAACCATGCCCAAACACGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048246.5 |
||
| CDS-3UTR CCA 90 bp | CACGTGTTTGGGCATGGTTTTTCAGGAGTGGGATGGTTGGATCACCAAATCAGTTTTCCCAGACACCACTaGAATGTTGCAGCTGACAGT | + |
|
Preference number: 4 (lower is better) Translates to: HVFGHGFSGVGWLDHQISFPRHH*NVAADS Trigger: ACTGTCAGCTGCAACATTCCAGTGGTGTCTGGGAAA...ACTGATTTGGTGATCCAACCATCCCACTCCTGAAAAACCATGCCCAAACACGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048246.5 |
||
| CDS-3UTR CCA 90 bp | GTGTGGTATAGACTGTCCAATAGACAGAATCCATGGCTACAAGGCCAGGCAAAAACATGCCGTTGTGGATaGTCATGGTTCTGTTCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: VWYRLSNRQNPWLQGQAKTCRCG*SWFCSP Trigger: GGGAGAACAGAACCATGACCATCCACAACGGCATGT...TTTTGCCTGGCCTTGTAGCCATGGATTCTGTCTATTGGACAGTCTATACCACAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048246.5 |
||
| CDS-3UTR TCA 90 bp | TGTTTGGGCATGGTTTTTCAGGAGTGGGATGGTTGGATCACCAAATCAGTTCTGGTACTGAAAGGTGACTaGGGAGGTATCGGAAACAGA | + |
|
Preference number: 4 (lower is better) Translates to: CLGMVFQEWDGWITKSVLVLKGD*GGIGNR Trigger: TCTGTTTCCGATACCTCCTCAGTCACCTTTCAGTAC...CAGAACTGATTTGGTGATCCAACCATCCCACTCCTGAAAAACCATGCCCAAACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048246.5 |
||
| CDS-3UTR CCA 90 bp | GTGTGGTATAGACTGTCCAATAGACAGAATCCATGGCTACAAGGCCAGGCAAAACGTTCTACTTTCTTCTaGTTGGCAGTAGCCTTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: VWYRLSNRQNPWLQGQAKRSTFF*LAVALA Trigger: AGCCAAGGCTACTGCCAACCAGAAGAAAGTAGAACG...TTTTGCCTGGCCTTGTAGCCATGGATTCTGTCTATTGGACAGTCTATACCACAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048246.5 |
||
| CDS-3UTR GCA 90 bp | TGTTTGGGCATGGTTTTTCAGGAGTGGGATGGTTGGATCACCAAATCAGTTCTGGAAGCCTCCATAATGTaGCTTCACCTTGTCTCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: CLGMVFQEWDGWITKSVLEASIM*LHLVSF Trigger: AAAGGAGACAAGGTGAAGGCACATTATGGAGGCTTC...CAGAACTGATTTGGTGATCCAACCATCCCACTCCTGAAAAACCATGCCCAAACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048246.5 |
||
| CDS-3UTR CCA 90 bp | TGTTTGGGCATGGTTTTTCAGGAGTGGGATGGTTGGATCACCAAATCAGTTCTGATGGAGGTGTCAGGCTaGATGAGATACATTTCGGAT | + |
|
Preference number: 4 (lower is better) Translates to: CLGMVFQEWDGWITKSVLMEVSG*MRYISD Trigger: ATCCGAAATGTATCTCATCCAGCCTGACACCTCCAT...CAGAACTGATTTGGTGATCCAACCATCCCACTCCTGAAAAACCATGCCCAAACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048246.5 |
||
| CDS-3UTR CCA 90 bp | TGTTTGGGCATGGTTTTTCAGGAGTGGGATGGTTGGATCACCAAATCAGTTCTGAAGAACATGCCGTTGTaGATGGTCATGGTTCTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: CLGMVFQEWDGWITKSVLKNMPL*MVMVLF Trigger: GAACAGAACCATGACCATCCACAACGGCATGTTCTT...CAGAACTGATTTGGTGATCCAACCATCCCACTCCTGAAAAACCATGCCCAAACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048246.5 |
||
| 3UTR CAA 72 bp | ACTCTGGCCTTGTTGTCTTCTTGGAAGGTAGAGCAGTaGCTTTCCCATGGAACAGCAGAACATTTGACACTT | + |
|
Preference number: 4 (lower is better) Translates to: TLALLSSWKVEQ*LSHGTAEHLTL Trigger: AAGTGTCAAATGTTCTGCTGTTCCATGGGAAAGCAACTGCTCTACCTTCCAAGAAGACAACAAGGCCAGAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048246.5 |
||
| CDS-3UTR TCA 90 bp | GTGTGGTATAGACTGTCCAATAGACAGAATCCATGGCTACAAGGCCAGGCAAAACAGCAATACTACTCTTaGTTGGCCTTTCCTGGTTTA | + |
|
Preference number: 4 (lower is better) Translates to: VWYRLSNRQNPWLQGQAKQQYYS*LAFPGL Trigger: TAAACCAGGAAAGGCCAATCAAGAGTAGTATTGCTG...TTTTGCCTGGCCTTGTAGCCATGGATTCTGTCTATTGGACAGTCTATACCACAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048246.5 |
||
| CDS-3UTR GCA 90 bp | GATAAAGTAGAAGATATCAGCATGTGTGGTATAGACTGTCCAATAGACAGAATCCCACACCATCATCTGTaGCGTGCTTGGACATGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: DKVEDISMCGIDCPIDRIPHHHL*RAWTCP Trigger: GGGACATGTCCAAGCACGGCACAGATGATGGTGTGG...GATTCTGTCTATTGGACAGTCTATACCACACATGCTGATATCTTCTACTTTATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048246.5 |
||
| CDS-3UTR CCA 90 bp | GTGTGGTATAGACTGTCCAATAGACAGAATCCATGGCTACAAGGCCAGGCAAAACACCACCATCTTCTTTaGAGCACTGTTTTCTTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: VWYRLSNRQNPWLQGQAKHHHLL*STVFLD Trigger: ATCCAAGAAAACAGTGCTCCAAAGAAGATGGTGGTG...TTTTGCCTGGCCTTGTAGCCATGGATTCTGTCTATTGGACAGTCTATACCACAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048246.5 |
||
| CDS-3UTR TCA 90 bp | GATAAAGTAGAAGATATCAGCATGTGTGGTATAGACTGTCCAATAGACAGAATCATGTCTGTGTCAGCATaGAGACAGCCTCCTGCATCG | + |
|
Preference number: 4 (lower is better) Translates to: DKVEDISMCGIDCPIDRIMSVSA*RQPPAS Trigger: CGATGCAGGAGGCTGTCTTCATGCTGACACAGACAT...GATTCTGTCTATTGGACAGTCTATACCACACATGCTGATATCTTCTACTTTATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048246.5 |
||
| CDS-3UTR TCA 90 bp | GTGTGGTATAGACTGTCCAATAGACAGAATCCATGGCTACAAGGCCAGGCAAAATCAATATATAATCTCTaGTCTTCCAGGATGGAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: VWYRLSNRQNPWLQGQAKSIYNL*SSRMEE Trigger: CTCCTCCATCCTGGAAGATCAGAGATTATATATTGA...TTTTGCCTGGCCTTGTAGCCATGGATTCTGTCTATTGGACAGTCTATACCACAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048246.5 |
||
| CDS-3UTR GCA 90 bp | GATAAAGTAGAAGATATCAGCATGTGTGGTATAGACTGTCCAATAGACAGAATCATGGGTCCCATTTCCTaGCAAAGTCGACGCTGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: DKVEDISMCGIDCPIDRIMGPIS*QSRRCH Trigger: ATGGCAGCGTCGACTTTGGCAGGAAATGGGACCCAT...GATTCTGTCTATTGGACAGTCTATACCACACATGCTGATATCTTCTACTTTATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048246.5 |
||
| CDS-3UTR CCA 90 bp | GATAAAGTAGAAGATATCAGCATGTGTGGTATAGACTGTCCAATAGACAGAATCAAGCCAATATTCACCTaGCAAGCCACAGTACTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: DKVEDISMCGIDCPIDRIKPIFT*QATVLL Trigger: AAGAAGTACTGTGGCTTGCCAGGTGAATATTGGCTT...GATTCTGTCTATTGGACAGTCTATACCACACATGCTGATATCTTCTACTTTATC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048246.5 |
||
| CDS-3UTR GCA 90 bp | GATAAAGTAGAAGATATCAGCATGTGTGGTATAGACTGTCCAATAGACAGAATCTTTAACAACGTTTGTTaGAATGTACATCCCGTAGGA | + |
|
Preference number: 4 (lower is better) Translates to: DKVEDISMCGIDCPIDRIFNNVC*NVHPVG Trigger: TCCTACGGGATGTACATTGCAACAAACGTTGTTAAA...GATTCTGTCTATTGGACAGTCTATACCACACATGCTGATATCTTCTACTTTATC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048246.5 |
||
| 3UTR CAA 72 bp | CAGATGGAACCAACCAACCATTTATTACCATCCTTTTaGTTAGTTCTCTGCAGGAAACGTAAACAAAGAATA | + |
|
Preference number: 4 (lower is better) Translates to: QMEPTNHLLPSF*LVLCRKRKQRI Trigger: TATTCTTTGTTTACGTTTCCTGCAGAGAACTAACAAAAAGGATGGTAATAAATGGTTGGTTGGTTCCATCTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048246.5 |
||
| CDS TCA 90 bp | AACATGCCGTTGTGGATGGTCATGGTTCTGTTCTCCCCCACCAGTTaGGAGGCCCCGTCCATGAGGGCGTTGCCAGCCGTCCCTTTGTAT | + |
|
Preference number: 5 (lower is better) Translates to: NMPLWMVMVLFSPTS*EAPSMRALPAVPLY Trigger: ATACAAAGGGACGGCTGGCAACGCCCTCATGGACGGGGCCTCTCAACTGGTGGGGGAGAACAGAACCATGACCATCCACAACGGCATGTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048246.5 |
||
| CDS-3UTR CAA 90 bp | AGCAGGGCAGGAACACTGACTGAGCTGGGGCTCGCCGAAGAAGTAAGGGTTGCAGACACCACTGGAATGTaGCAGCTGACAGTGCATGGA | + |
|
Preference number: 5 (lower is better) Translates to: SRAGTLTELGLAEEVRVADTTGM*QLTVHG Trigger: TCCATGCACTGTCAGCTGCAACATTCCAGTGGTGTC...TGCAACCCTTACTTCTTCGGCGAGCCCCAGCTCAGTCAGTGTTCCTGCCCTGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048246.5 |
||
| CDS-3UTR CAA 90 bp | AGCAGGGCAGGAACACTGACTGAGCTGGGGCTCGCCGAAGAAGTAAGGGTTGCATATACTCTGTACGGCTaGATGGAGGTGTCAGGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: SRAGTLTELGLAEEVRVAYTLYG*MEVSGW Trigger: CCAGCCTGACACCTCCATCAAGCCGTACAGAGTATA...TGCAACCCTTACTTCTTCGGCGAGCCCCAGCTCAGTCAGTGTTCCTGCCCTGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048246.5 |
||
| CDS TCA 90 bp | CCCGTCCATGAGGGCGTTGCCAGCCGTCCCTTTGTATTTGTTCACTaGGACTTGGTATTTGCTGGCCTCGTTCTGTACCGTGAAGCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: PVHEGVASRPFVFVH*DLVFAGLVLYREAS Trigger: GGAGGCTTCACGGTACAGAACGAGGCCAGCAAATACCAAGTCTCAGTGAACAAATACAAAGGGACGGCTGGCAACGCCCTCATGGACGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048246.5 |
||
| CDS-3UTR CAA 90 bp | AGCAGGGCAGGAACACTGACTGAGCTGGGGCTCGCCGAAGAAGTAAGGGTTGCATCTACTTTCTTCTGGTaGGCAGTAGCCTTGGCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: SRAGTLTELGLAEEVRVASTFFW*AVALAG Trigger: TCCAGCCAAGGCTACTGCCAACCAGAAGAAAGTAGA...TGCAACCCTTACTTCTTCGGCGAGCCCCAGCTCAGTCAGTGTTCCTGCCCTGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048246.5 |
||
| CDS-3UTR CAA 90 bp | AGCAGGGCAGGAACACTGACTGAGCTGGGGCTCGCCGAAGAAGTAAGGGTTGCACTGAAGAACATGCCGTaGTGGATGGTCATGGTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: SRAGTLTELGLAEEVRVALKNMP*WMVMVL Trigger: CAGAACCATGACCATCCACAACGGCATGTTCTTCAG...TGCAACCCTTACTTCTTCGGCGAGCCCCAGCTCAGTCAGTGTTCCTGCCCTGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048246.5 |
||
| CDS GCA 90 bp | AGTACCACGATCCCTTCCAGTTCATCCACACCACACCATCATCTGTaGCGTGCTTGGACATGTCCCAGCTGTAAAGGCCACCCCAGTAGT | + |
|
Preference number: 5 (lower is better) Translates to: STTIPSSSSTPHHHL*RAWTCPSCKGHPSS Trigger: ACTACTGGGGTGGCCTTTACAGCTGGGACATGTCCAAGCACGGCACAGATGATGGTGTGGTGTGGATGAACTGGAAGGGATCGTGGTACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048246.5 |
||
| CDS-3UTR CAA 90 bp | TGTTTGGGCATGGTTTTTCAGGAGTGGGATGGTTGGATCACCAAATCAGTTCTGGTTCTCCCCCACCAGTaGAGAGGCCCCGTCCATGAG | + |
|
Preference number: 5 (lower is better) Translates to: CLGMVFQEWDGWITKSVLVLPHQ*RGPVHE Trigger: CTCATGGACGGGGCCTCTCAACTGGTGGGGGAGAAC...CAGAACTGATTTGGTGATCCAACCATCCCACTCCTGAAAAACCATGCCCAAACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000048246.5 |
||
| CDS CCA 90 bp | GTTATACCACCAGCCACCACCATCTTCTTTGGAGCACTGTTTTCTTaGATCCGTAGTTACCCAGCCGTCGTTGTCCCTGTCGTACGTGCT | + |
|
Preference number: 5 (lower is better) Translates to: VIPPATTIFFGALFS*IRSYPAVVVPVVRA Trigger: AGCACGTACGACAGGGACAACGACGGCTGGGTAACTACGGATCCAAGAAAACAGTGCTCCAAAGAAGATGGTGGTGGCTGGTGGTATAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048246.5 |
||
| CDS-3UTR CAA 90 bp | AGCAGGGCAGGAACACTGACTGAGCTGGGGCTCGCCGAAGAAGTAAGGGTTGCATTTCCGAATCCTTTTTaGTATGGGTCCCATTTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: SRAGTLTELGLAEEVRVAFPNPF*YGSHFL Trigger: CAGGAAATGGGACCCATACAAAAAAGGATTCGGAAA...TGCAACCCTTACTTCTTCGGCGAGCCCCAGCTCAGTCAGTGTTCCTGCCCTGCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048246.5 |
||
| CDS-3UTR CAA 90 bp | TGTTTGGGCATGGTTTTTCAGGAGTGGGATGGTTGGATCACCAAATCAGTTCTGTCAGGTCCTCCAGGATaGAGCGGAGCACACGAAGAT | + |
|
Preference number: 5 (lower is better) Translates to: CLGMVFQEWDGWITKSVLSGPPG*SGAHED Trigger: ATCTTCGTGTGCTCCGCTCAATCCTGGAGGACCTGA...CAGAACTGATTTGGTGATCCAACCATCCCACTCCTGAAAAACCATGCCCAAACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048246.5 |
||
| CDS TCA 90 bp | ATTTGTTCACTGAGACTTGGTATTTGCTGGCCTCGTTCTGTACCGTaGAGCCTCCATAATGTGCCTTCACCTTGTCTCCTTTCCAGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: ICSLRLGICWPRSVP*SLHNVPSPCLLSSP Trigger: AGGACTGGAAAGGAGACAAGGTGAAGGCACATTATGGAGGCTTCACGGTACAGAACGAGGCCAGCAAATACCAAGTCTCAGTGAACAAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048246.5 |
||
| CDS CCA 90 bp | TCCTCCATTTCAATGAGAAGTTCTGTGGGTCCCATCCTGGTGAGCTaGCTAATCTTATCATTGCCAAGCCAATATTCACCTGGCAAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: SSISMRSSVGPILVS*LILSLPSQYSPGKP Trigger: TGGCTTGCCAGGTGAATATTGGCTTGGCAATGATAAGATTAGCCAGCTCACCAGGATGGGACCCACAGAACTTCTCATTGAAATGGAGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048246.5 |
||
| CDS-3UTR CAA 90 bp | CACGTGTTTGGGCATGGTTTTTCAGGAGTGGGATGGTTGGATCACCAAATCAGTCCACCACCATCTTCTTaGGAGCACTGTTTTCTTGGA | + |
|
Preference number: 5 (lower is better) Translates to: HVFGHGFSGVGWLDHQISPPPSS*EHCFLG Trigger: TCCAAGAAAACAGTGCTCCAAAGAAGATGGTGGTGG...ACTGATTTGGTGATCCAACCATCCCACTCCTGAAAAACCATGCCCAAACACGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048246.5 |
||
| CDS CCA 90 bp | TTCATGTCACAGTATACTCTGTACGGCTTGATGGAGGTGTCAGGCTaGATGAGATACATTTCGGATGTCTCACCTCCCTTCCTAATGATC | + |
|
Preference number: 5 (lower is better) Translates to: FMSQYTLYGLMEVSG*MRYISDVSPPFLMI Trigger: GATCATTAGGAAGGGAGGTGAGACATCCGAAATGTATCTCATCCAGCCTGACACCTCCATCAAGCCGTACAGAGTATACTGTGACATGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048246.5 |
||
| CDS CCA 90 bp | CCTGGTGAGCTGGCTAATCTTATCATTGCCAAGCCAATATTCACCTaGCAAGCCACAGTACTTCTTCGCGTCTTCATTGGTGGCAATATT | + |
|
Preference number: 5 (lower is better) Translates to: PGELANLIIAKPIFT*QATVLLRVFIGGNI Trigger: AATATTGCCACCAATGAAGACGCGAAGAAGTACTGTGGCTTGCCAGGTGAATATTGGCTTGGCAATGATAAGATTAGCCAGCTCACCAGG 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048246.5 |
||
| CDS-3UTR CAA 90 bp | GTGTGGTATAGACTGTCCAATAGACAGAATCCATGGCTACAAGGCCAGGCAAAATTGCCAGCCGTCCCTTaGTATTTGTTCACTGAGACT | + |
|
Preference number: 5 (lower is better) Translates to: VWYRLSNRQNPWLQGQAKLPAVP*YLFTET Trigger: AGTCTCAGTGAACAAATACAAAGGGACGGCTGGCAA...TTTTGCCTGGCCTTGTAGCCATGGATTCTGTCTATTGGACAGTCTATACCACAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048246.5 |
||
| CDS-3UTR CAA 90 bp | TGTTTGGGCATGGTTTTTCAGGAGTGGGATGGTTGGATCACCAAATCAGTTCTGAGTAGTATCTGCCATTaGGATTGGCTGCATGGCATC | + |
|
Preference number: 5 (lower is better) Translates to: CLGMVFQEWDGWITKSVLSSICH*DWLHGI Trigger: GATGCCATGCAGCCAATCCAAATGGCAGATACTACT...CAGAACTGATTTGGTGATCCAACCATCCCACTCCTGAAAAACCATGCCCAAACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048246.5 |
||
| CDS TCA 90 bp | GGAATGTTGCAGCTGACAGTGCATGGAGTGCGGCAGTATTCCATTTaGGCTGAGATGTCAGACTCTAATTTTTGTATTTTGCTTCTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: GMLQLTVHGVRQYSI*AEMSDSNFCILLLR Trigger: CCTGAGAAGCAAAATACAAAAATTAGAGTCTGACATCTCAGCTCAAATGGAATACTGCCGCACTCCATGCACTGTCAGCTGCAACATTCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048246.5 |
||
| CDS GCA 90 bp | GCAATACTACTCTTGATTGGCCTTTCCTGGTTTAACAACGTTTGTTaGAATGTACATCCCGTAGGACACAACACTCCCATGTCTGTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: AILLLIGLSWFNNVC*NVHPVGHNTPMSVS Trigger: TGACACAGACATGGGAGTGTTGTGTCCTACGGGATGTACATTGCAACAAACGTTGTTAAACCAGGAAAGGCCAATCAAGAGTAGTATTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048246.5 |
||
| CDS-3UTR CAA 90 bp | CACGTGTTTGGGCATGGTTTTTCAGGAGTGGGATGGTTGGATCACCAAATCAGTCTCTTTAACTTGAGCTaGCTTCTTTTTCCACATGTC | + |
|
Preference number: 5 (lower is better) Translates to: HVFGHGFSGVGWLDHQISLFNLS*LLFPHV Trigger: GACATGTGGAAAAAGAAGCAAGCTCAAGTTAAAGAG...ACTGATTTGGTGATCCAACCATCCCACTCCTGAAAAACCATGCCCAAACACGTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000048246.5 |
||
| CDS TCA 90 bp | GCTTCTTTTTCCACATGTCCTTTAGCAGAGTCAGGTACTGAAAGGTaGCTGAGGAGGTATCGGAAACAGACTGTATGTTGTTATTTAACT | + |
|
Preference number: 5 (lower is better) Translates to: ASFSTCPLAESGTER*LRRYRKQTVCCYLT Trigger: AGTTAAATAACAACATACAGTCTGTTTCCGATACCTCCTCAGTCACCTTTCAGTACCTGACTCTGCTAAAGGACATGTGGAAAAAGAAGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048246.5 |
||
| CDS-3UTR CAA 90 bp | GATAAAGTAGAAGATATCAGCATGTGTGGTATAGACTGTCCAATAGACAGAATCGCCGTCCCTTTGTATTaGTTCACTGAGACTTGGTAT | + |
|
Preference number: 5 (lower is better) Translates to: DKVEDISMCGIDCPIDRIAVPLY*FTETWY Trigger: ATACCAAGTCTCAGTGAACAAATACAAAGGGACGGC...GATTCTGTCTATTGGACAGTCTATACCACACATGCTGATATCTTCTACTTTATC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048246.5 |
||
| CDS CCA 90 bp | ATGTTGTTATTTAACTCAGCAATACTACTCTTGATTGGCCTTTCCTaGTTTAACAACGTTTGTTGCAATGTACATCCCGTAGGACACAAC | + |
|
Preference number: 5 (lower is better) Translates to: MLLFNSAILLLIGLS*FNNVCCNVHPVGHN Trigger: GTTGTGTCCTACGGGATGTACATTGCAACAAACGTTGTTAAACCAGGAAAGGCCAATCAAGAGTAGTATTGCTGAGTTAAATAACAACAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048246.5 |
||
| CDS-3UTR CAA 90 bp | GATAAAGTAGAAGATATCAGCATGTGTGGTATAGACTGTCCAATAGACAGAATCTGGCTAATCTTATCATaGCCAAGCCAATATTCACCT | + |
|
Preference number: 5 (lower is better) Translates to: DKVEDISMCGIDCPIDRIWLILS*PSQYSP Trigger: AGGTGAATATTGGCTTGGCAATGATAAGATTAGCCA...GATTCTGTCTATTGGACAGTCTATACCACACATGCTGATATCTTCTACTTTATC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048246.5 |
||
| CDS CCA 72 bp | CCGTTCTACTTTCTTCTGGTTGGCAGTAGCCTTGGCTaGACGGGCTCGATAGCCCCCTCCACTGATAGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: PFYFLLVGSSLG*TGSIAPSTDRR Trigger: CCTCCTATCAGTGGAGGGGGCTATCGAGCCCGTCCAGCCAAGGCTACTGCCAACCAGAAGAAAGTAGAACGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048246.5 |
||
| CDS CAA 72 bp | GAGGCCCCGTCCATGAGGGCGTTGCCAGCCGTCCCTTaGTATTTGTTCACTGAGACTTGGTATTTGCTGGCC | + |
|
Preference number: 6 (lower is better) Translates to: EAPSMRALPAVP*YLFTETWYLLA Trigger: GGCCAGCAAATACCAAGTCTCAGTGAACAAATACAAAGGGACGGCTGGCAACGCCCTCATGGACGGGGCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048246.5 |
||
| CDS TCA 72 bp | GGGTCCCATTTCCTGCCAAAGTCGACGCTGCCATCCTaGCGGTTCTGTATGACTGTCCATCCTCCGTTTTCT | + |
|
Preference number: 6 (lower is better) Translates to: GSHFLPKSTLPS*RFCMTVHPPFS Trigger: AGAAAACGGAGGATGGACAGTCATACAGAACCGTCAGGATGGCAGCGTCGACTTTGGCAGGAAATGGGACCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048246.5 |
||
| CDS GCA 72 bp | ATCCCTTCCAGTTCATCCACACCACACCATCATCTGTaGCGTGCTTGGACATGTCCCAGCTGTAAAGGCCAC | + |
|
Preference number: 6 (lower is better) Translates to: IPSSSSTPHHHL*RAWTCPSCKGH Trigger: GTGGCCTTTACAGCTGGGACATGTCCAAGCACGGCACAGATGATGGTGTGGTGTGGATGAACTGGAAGGGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048246.5 |
||
| CDS CAA 72 bp | CCGTCCATGAGGGCGTTGCCAGCCGTCCCTTTGTATTaGTTCACTGAGACTTGGTATTTGCTGGCCTCGTTC | + |
|
Preference number: 6 (lower is better) Translates to: PSMRALPAVPLY*FTETWYLLASF Trigger: GAACGAGGCCAGCAAATACCAAGTCTCAGTGAACAAATACAAAGGGACGGCTGGCAACGCCCTCATGGACGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048246.5 |
||
| CDS CAA 72 bp | TCGTTGTCCCTGTCGTACGTGCTGAAGAACATGCCGTaGTGGATGGTCATGGTTCTGTTCTCCCCCACCAGT | + |
|
Preference number: 6 (lower is better) Translates to: SLSLSYVLKNMP*WMVMVLFSPTS Trigger: ACTGGTGGGGGAGAACAGAACCATGACCATCCACAACGGCATGTTCTTCAGCACGTACGACAGGGACAACGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048246.5 |
||
| CDS CAA 72 bp | CACTGTTTTCTTGGATCCGTAGTTACCCAGCCGTCGTaGTCCCTGTCGTACGTGCTGAAGAACATGCCGTTG | + |
|
Preference number: 6 (lower is better) Translates to: HCFLGSVVTQPS*SLSYVLKNMPL Trigger: CAACGGCATGTTCTTCAGCACGTACGACAGGGACAACGACGGCTGGGTAACTACGGATCCAAGAAAACAGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048246.5 |
||
| CDS CAA 90 bp | TCTTTGGAGCACTGTTTTCTTGGATCCGTAGTTACCCAGCCGTCGTaGTCCCTGTCGTACGTGCTGAAGAACATGCCGTTGTGGATGGTC | + |
|
Preference number: 6 (lower is better) Translates to: SLEHCFLGSVVTQPS*SLSYVLKNMPLWMV Trigger: GACCATCCACAACGGCATGTTCTTCAGCACGTACGACAGGGACAACGACGGCTGGGTAACTACGGATCCAAGAAAACAGTGCTCCAAAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048246.5 |
||
| CDS TCA 72 bp | CACACTCTTTCCCAGACACCACTGGAATGTTGCAGCTaGCAGTGCATGGAGTGCGGCAGTATTCCATTTGAG | + |
|
Preference number: 6 (lower is better) Translates to: HTLSQTPLECCS*QCMECGSIPFE Trigger: CTCAAATGGAATACTGCCGCACTCCATGCACTGTCAGCTGCAACATTCCAGTGGTGTCTGGGAAAGAGTGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048246.5 |
||
| CDS CCA 72 bp | CAGTATACTCTGTACGGCTTGATGGAGGTGTCAGGCTaGATGAGATACATTTCGGATGTCTCACCTCCCTTC | + |
|
Preference number: 6 (lower is better) Translates to: QYTLYGLMEVSG*MRYISDVSPPF Trigger: GAAGGGAGGTGAGACATCCGAAATGTATCTCATCCAGCCTGACACCTCCATCAAGCCGTACAGAGTATACTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048246.5 |
||
| CDS CAA 72 bp | GCGTCTTCATTGGTGGCAATATTTCCGAATCCTTTTTaGTATGGGTCCCATTTCCTGCCAAAGTCGACGCTG | + |
|
Preference number: 6 (lower is better) Translates to: ASSLVAIFPNPF*YGSHFLPKSTL Trigger: CAGCGTCGACTTTGGCAGGAAATGGGACCCATACAAAAAAGGATTCGGAAATATTGCCACCAATGAAGACGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048246.5 |
||
| CDS CAA 90 bp | CATCCTCCGTTTTCTGTTTTCATGTCACAGTATACTCTGTACGGCTaGATGGAGGTGTCAGGCTGGATGAGATACATTTCGGATGTCTCA | + |
|
Preference number: 6 (lower is better) Translates to: HPPFSVFMSQYTLYG*MEVSGWMRYISDVS Trigger: TGAGACATCCGAAATGTATCTCATCCAGCCTGACACCTCCATCAAGCCGTACAGAGTATACTGTGACATGAAAACAGAAAACGGAGGATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048246.5 |
||
| CDS TCA 72 bp | TCCACATGTCCTTTAGCAGAGTCAGGTACTGAAAGGTaGCTGAGGAGGTATCGGAAACAGACTGTATGTTGT | + |
|
Preference number: 6 (lower is better) Translates to: STCPLAESGTER*LRRYRKQTVCC Trigger: ACAACATACAGTCTGTTTCCGATACCTCCTCAGTCACCTTTCAGTACCTGACTCTGCTAAAGGACATGTGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048246.5 |
||
| CDS GCA 72 bp | CTCTTGATTGGCCTTTCCTGGTTTAACAACGTTTGTTaGAATGTACATCCCGTAGGACACAACACTCCCATG | + |
|
Preference number: 6 (lower is better) Translates to: LLIGLSWFNNVC*NVHPVGHNTPM Trigger: CATGGGAGTGTTGTGTCCTACGGGATGTACATTGCAACAAACGTTGTTAAACCAGGAAAGGCCAATCAAGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048246.5 |
||
| CDS CCA 72 bp | CTGGCTAATCTTATCATTGCCAAGCCAATATTCACCTaGCAAGCCACAGTACTTCTTCGCGTCTTCATTGGT | + |
|
Preference number: 6 (lower is better) Translates to: LANLIIAKPIFT*QATVLLRVFIG Trigger: ACCAATGAAGACGCGAAGAAGTACTGTGGCTTGCCAGGTGAATATTGGCTTGGCAATGATAAGATTAGCCAG 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048246.5 |
||
| CDS CCA 72 bp | TCAATGAGAAGTTCTGTGGGTCCCATCCTGGTGAGCTaGCTAATCTTATCATTGCCAAGCCAATATTCACCT | + |
|
Preference number: 6 (lower is better) Translates to: SMRSSVGPILVS*LILSLPSQYSP Trigger: AGGTGAATATTGGCTTGGCAATGATAAGATTAGCCAGCTCACCAGGATGGGACCCACAGAACTTCTCATTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048246.5 |
||
| CDS TCA 72 bp | CAGCTGACAGTGCATGGAGTGCGGCAGTATTCCATTTaGGCTGAGATGTCAGACTCTAATTTTTGTATTTTG | + |
|
Preference number: 6 (lower is better) Translates to: QLTVHGVRQYSI*AEMSDSNFCIL Trigger: CAAAATACAAAAATTAGAGTCTGACATCTCAGCTCAAATGGAATACTGCCGCACTCCATGCACTGTCAGCTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048246.5 |
||
| CDS CAA 72 bp | AAGGTGACTGAGGAGGTATCGGAAACAGACTGTATGTaGTTATTTAACTCAGCAATACTACTCTTGATTGGC | + |
|
Preference number: 6 (lower is better) Translates to: KVTEEVSETDCM*LFNSAILLLIG Trigger: GCCAATCAAGAGTAGTATTGCTGAGTTAAATAACAACATACAGTCTGTTTCCGATACCTCCTCAGTCACCTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048246.5 |
||
| CDS CCA 72 bp | TTTAACTCAGCAATACTACTCTTGATTGGCCTTTCCTaGTTTAACAACGTTTGTTGCAATGTACATCCCGTA | + |
|
Preference number: 6 (lower is better) Translates to: FNSAILLLIGLS*FNNVCCNVHPV Trigger: TACGGGATGTACATTGCAACAAACGTTGTTAAACCAGGAAAGGCCAATCAAGAGTAGTATTGCTGAGTTAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048246.5 |
||
| CDS CAA 72 bp | GACTGTATGTTGTTATTTAACTCAGCAATACTACTCTaGATTGGCCTTTCCTGGTTTAACAACGTTTGTTGC | + |
|
Preference number: 6 (lower is better) Translates to: DCMLLFNSAILL*IGLSWFNNVCC Trigger: GCAACAAACGTTGTTAAACCAGGAAAGGCCAATCAAGAGTAGTATTGCTGAGTTAAATAACAACATACAGTC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048246.5 |
||
| CDS CAA 90 bp | TCGGAAACAGACTGTATGTTGTTATTTAACTCAGCAATACTACTCTaGATTGGCCTTTCCTGGTTTAACAACGTTTGTTGCAATGTACAT | + |
|
Preference number: 6 (lower is better) Translates to: SETDCMLLFNSAILL*IGLSWFNNVCCNVH Trigger: ATGTACATTGCAACAAACGTTGTTAAACCAGGAAAGGCCAATCAAGAGTAGTATTGCTGAGTTAAATAACAACATACAGTCTGTTTCCGA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048246.5 |
||