Pregenerated sensors for FFAR2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000051314Ensembl transcript IDs: ENSMUST00000053156.10, ENSMUST00000163504.8, ENSMUST00000168528.8, ENSMUST00000186059.2, ENSMUST00000186339.7, ENSMUST00000186534.2
Found 83 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ATGCTTCTCTGGGCAGGAAAATTCAGTCAAGTGGTTCTGCTGAGCTaGGAGGGCAGTGGCAGATGGGTGGAGGTGTCTTTCTTTCTTTCT | + |
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Preference number: 1 (lower is better) Translates to: MLLWAGKFSQVVLLS*EGSGRWVEVSFFLS Trigger: AGAAAGAAAGAAAGACACCTCCACCCATCTGCCACTGCCCTCTCAGCTCAGCAGAACCACTTGACTGAATTTTCCTGCCCAGAGAAGCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053156.10 ENSMUST00000163504.8 |
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| 3UTR CCA 90 bp | GGCAGGAAAATTCAGTCAAGTGGTTCTGCTGAGCTGAGAGGGCAGTaGCAGATGGGTGGAGGTGTCTTTCTTTCTTTCTTTCTTTCTTTC | + |
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Preference number: 1 (lower is better) Translates to: GRKIQSSGSAELRGQ*QMGGGVFLSFFLSF Trigger: GAAAGAAAGAAAGAAAGAAAGAAAGACACCTCCACCCATCTGCCACTGCCCTCTCAGCTCAGCAGAACCACTTGACTGAATTTTCCTGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053156.10 ENSMUST00000163504.8 |
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| 3UTR-3UTR TCA 90 bp | CCAAGATCACCAGAGATGGGAGCCCTGTGTGTTGCCCGCCCTCAGCCCCTGCCTCCCCTGACCCCACTGTaGAAATACAGTGTAAGGGTG | + |
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Preference number: 2 (lower is better) Translates to: PRSPEMGALCVARPQPLPPLTPL*KYSVRV Trigger: CACCCTTACACTGTATTTTCACAGTGGGGTCAGGGG...AGGCAGGGGCTGAGGGCGGGCAACACACAGGGCTCCCATCTCTGGTGATCTTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000053156.10 ENSMUST00000163504.8 |
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| 3UTR-3UTR CCA 90 bp | CCAAGATCACCAGAGATGGGAGCCCTGTGTGTTGCCCGCCCTCAGCCCCTGCCTTTCCTTCTTGTATCCTaGAGCTATGCTTCTCTGGGC | + |
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Preference number: 2 (lower is better) Translates to: PRSPEMGALCVARPQPLPFLLVS*SYASLG Trigger: GCCCAGAGAAGCATAGCTCCAGGATACAAGAAGGAA...AGGCAGGGGCTGAGGGCGGGCAACACACAGGGCTCCCATCTCTGGTGATCTTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053156.10 ENSMUST00000163504.8 |
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| 3UTR-3UTR TCA 90 bp | CATCTCCTAGACCCAGTGACTGGTGACACAGAGGATAAGCATGTGACCCAGATCGTGGTTCTGCTGAGCTaGGAGGGCAGTGGCAGATGG | + |
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Preference number: 2 (lower is better) Translates to: HLLDPVTGDTEDKHVTQIVVLLS*EGSGRW Trigger: CCATCTGCCACTGCCCTCTCAGCTCAGCAGAACCAC...GATCTGGGTCACATGCTTATCCTCTGTGTCACCAGTCACTGGGTCTAGGAGATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053156.10 ENSMUST00000163504.8 |
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| 3UTR-3UTR CCA 90 bp | AAGGGTGTAGCCATTCCTTCTTGTATCCTGGAGCTATGCTTCTCTGGGCAGGAAGAGCTGAGAGGGCAGTaGCAGATGGGTGGAGGTGTC | + |
|
Preference number: 2 (lower is better) Translates to: KGVAIPSCILELCFSGQEELRGQ*QMGGGV Trigger: GACACCTCCACCCATCTGCCACTGCCCTCTCAGCTC...TTCCTGCCCAGAGAAGCATAGCTCCAGGATACAAGAAGGAATGGCTACACCCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053156.10 ENSMUST00000163504.8 |
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| 3UTR-3UTR CCA 90 bp | TCAGCCCCTGCCTCAAGGCTGTGGCTTAGAGCTTTCCCGGCATTCCTCTTCTTCCCCCATCTTTTCCATTaGCTTCTTTCCAGCATCACC | + |
|
Preference number: 2 (lower is better) Translates to: SAPASRLWLRAFPAFLFFPHLFH*LLSSIT Trigger: GGTGATGCTGGAAAGAAGCCAATGGAAAAGATGGGG...GAAGAAGAGGAATGCCGGGAAAGCTCTAAGCCACAGCCTTGAGGCAGGGGCTGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000053156.10 ENSMUST00000163504.8 |
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| 3UTR-3UTR CCA 90 bp | CATCTCCTAGACCCAGTGACTGGTGACACAGAGGATAAGCATGTGACCCAGATCCAAGATCACCAGAGATaGGAGCCCTGTGTGTTGCCC | + |
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Preference number: 2 (lower is better) Translates to: HLLDPVTGDTEDKHVTQIQDHQR*EPCVLP Trigger: GGGCAACACACAGGGCTCCCATCTCTGGTGATCTTG...GATCTGGGTCACATGCTTATCCTCTGTGTCACCAGTCACTGGGTCTAGGAGATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053156.10 ENSMUST00000163504.8 |
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| 3UTR-3UTR TCA 90 bp | ATCTTTTCCATTGGCTTCTTTCCAGCATCACCAGCCAGATCACTGTCTCTAGGTGTGGTTCTGCTGAGCTaGGAGGGCAGTGGCAGATGG | + |
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Preference number: 2 (lower is better) Translates to: IFSIGFFPASPARSLSLGVVLLS*EGSGRW Trigger: CCATCTGCCACTGCCCTCTCAGCTCAGCAGAACCAC...ACCTAGAGACAGTGATCTGGCTGGTGATGCTGGAAAGAAGCCAATGGAAAAGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053156.10 ENSMUST00000163504.8 |
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| 3UTR-3UTR TCA 90 bp | ATCTTTTCCATTGGCTTCTTTCCAGCATCACCAGCCAGATCACTGTCTCTAGGTGTCAAGTGGTTCTGCTaGGCTGAGAGGGCAGTGGCA | + |
|
Preference number: 2 (lower is better) Translates to: IFSIGFFPASPARSLSLGVKWFC*AERAVA Trigger: TGCCACTGCCCTCTCAGCTCAGCAGAACCACTTGAC...ACCTAGAGACAGTGATCTGGCTGGTGATGCTGGAAAGAAGCCAATGGAAAAGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053156.10 ENSMUST00000163504.8 |
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| 3UTR-3UTR CCA 90 bp | CATCTCCTAGACCCAGTGACTGGTGACACAGAGGATAAGCATGTGACCCAGATCGCAGTGGCAGATGGGTaGAGGTGTCTTTCTTTCTTT | + |
|
Preference number: 2 (lower is better) Translates to: HLLDPVTGDTEDKHVTQIAVADG*RCLSFF Trigger: AAAGAAAGAAAGACACCTCCACCCATCTGCCACTGC...GATCTGGGTCACATGCTTATCCTCTGTGTCACCAGTCACTGGGTCTAGGAGATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053156.10 ENSMUST00000163504.8 |
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| 3UTR-3UTR CCA 90 bp | ATCTTTTCCATTGGCTTCTTTCCAGCATCACCAGCCAGATCACTGTCTCTAGGTTTCCTTCTTGTATCCTaGAGCTATGCTTCTCTGGGC | + |
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Preference number: 2 (lower is better) Translates to: IFSIGFFPASPARSLSLGFLLVS*SYASLG Trigger: GCCCAGAGAAGCATAGCTCCAGGATACAAGAAGGAA...ACCTAGAGACAGTGATCTGGCTGGTGATGCTGGAAAGAAGCCAATGGAAAAGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053156.10 ENSMUST00000163504.8 |
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| 3UTR CAA 90 bp | TACCTGCCAAACCAGATTTTCTTTTTAATCCTTCCTTTCAGGTCATaGTCAATGTCAGACAGACGGGTACCAAGACATCTCCTAGACCCA | + |
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Preference number: 2 (lower is better) Translates to: YLPNQIFFLILPFRS*SMSDRRVPRHLLDP Trigger: TGGGTCTAGGAGATGTCTTGGTACCCGTCTGTCTGACATTGACAATGACCTGAAAGGAAGGATTAAAAAGAAAATCTGGTTTGGCAGGTA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053156.10 ENSMUST00000163504.8 |
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| 3UTR CCA 72 bp | GTGTGTTGCCCGCCCTCAGCCCCTGCCTCAAGGCTGTaGCTTAGAGCTTTCCCGGCATTCCTCTTCTTCCCC | + |
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Preference number: 3 (lower is better) Translates to: VCCPPSAPASRL*LRAFPAFLFFP Trigger: GGGGAAGAAGAGGAATGCCGGGAAAGCTCTAAGCCACAGCCTTGAGGCAGGGGCTGAGGGCGGGCAACACAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053156.10 ENSMUST00000163504.8 |
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| 3UTR CCA 72 bp | ATTCAGTCAAGTGGTTCTGCTGAGCTGAGAGGGCAGTaGCAGATGGGTGGAGGTGTCTTTCTTTCTTTCTTT | + |
|
Preference number: 3 (lower is better) Translates to: IQSSGSAELRGQ*QMGGGVFLSFF Trigger: AAAGAAAGAAAGAAAGACACCTCCACCCATCTGCCACTGCCCTCTCAGCTCAGCAGAACCACTTGACTGAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053156.10 ENSMUST00000163504.8 |
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| 3UTR CCA 72 bp | AGCCATTCCTTCTTGTATCCTGGAGCTATGCTTCTCTaGGCAGGAAAATTCAGTCAAGTGGTTCTGCTGAGC | + |
|
Preference number: 3 (lower is better) Translates to: SHSFLYPGAMLL*AGKFSQVVLLS Trigger: GCTCAGCAGAACCACTTGACTGAATTTTCCTGCCCAGAGAAGCATAGCTCCAGGATACAAGAAGGAATGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053156.10 ENSMUST00000163504.8 |
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| 3UTR GCA 72 bp | AAGGGTGTAGCCATTCCTTCTTGTATCCTGGAGCTATaGTTCTCTGGGCAGGAAAATTCAGTCAAGTGGTTC | + |
|
Preference number: 3 (lower is better) Translates to: KGVAIPSCILEL*FSGQENSVKWF Trigger: GAACCACTTGACTGAATTTTCCTGCCCAGAGAAGCATAGCTCCAGGATACAAGAAGGAATGGCTACACCCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053156.10 ENSMUST00000163504.8 |
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| 3UTR-3UTR CAA 90 bp | ATAACAGTGGAGACAAGACCAAAATATGAAAATCAGCGGAGCACATGTACAAAGCCCCCATCTTTTCCATaGGCTTCTTTCCAGCATCAC | + |
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Preference number: 3 (lower is better) Translates to: ITVETRPKYENQRSTCTKPPSFP*ASFQHH Trigger: GTGATGCTGGAAAGAAGCCAATGGAAAAGATGGGGG...CTTTGTACATGTGCTCCGCTGATTTTCATATTTTGGTCTTGTCTCCACTGTTAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000053156.10 ENSMUST00000163504.8 |
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| CDS-3UTR TCA 90 bp | CCAAGATCACCAGAGATGGGAGCCCTGTGTGTTGCCCGCCCTCAGCCCCTGCCTGGCGAACCCGGCCCATaGAGGCCCGCAGGGCCAGCA | + |
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Preference number: 4 (lower is better) Translates to: PRSPEMGALCVARPQPLPGEPGP*RPAGPA Trigger: TGCTGGCCCTGCGGGCCTTCATGGGCCGGGTTCGCC...AGGCAGGGGCTGAGGGCGGGCAACACACAGGGCTCCCATCTCTGGTGATCTTGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053156.10 ENSMUST00000163504.8 |
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| CDS-3UTR TCA 90 bp | CCAAGATCACCAGAGATGGGAGCCCTGTGTGTTGCCCGCCCTCAGCCCCTGCCTTGCACAGGGGCAGGCTaGGGCTGGCGAACCCGGCCC | + |
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Preference number: 4 (lower is better) Translates to: PRSPEMGALCVARPQPLPCTGAG*GWRTRP Trigger: GGGCCGGGTTCGCCAGCCTCAGCCTGCCCCTGTGCA...AGGCAGGGGCTGAGGGCGGGCAACACACAGGGCTCCCATCTCTGGTGATCTTGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053156.10 ENSMUST00000163504.8 |
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| CDS-3UTR GCA 90 bp | CCAAGATCACCAGAGATGGGAGCCCTGTGTGTTGCCCGCCCTCAGCCCCTGCCTCCAGCGGAAGTTGGATaGTGCTTCCACGATCCGGAA | + |
|
Preference number: 4 (lower is better) Translates to: PRSPEMGALCVARPQPLPPAEVG*CFHDPE Trigger: TTCCGGATCGTGGAAGCAGCATCCAACTTCCGCTGG...AGGCAGGGGCTGAGGGCGGGCAACACACAGGGCTCCCATCTCTGGTGATCTTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053156.10 ENSMUST00000163504.8 |
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| CDS-3UTR CCA 90 bp | CCAAGATCACCAGAGATGGGAGCCCTGTGTGTTGCCCGCCCTCAGCCCCTGCCTCACCCCTGTCCATCTTaGTCCCCTCCACTGTCTCTT | + |
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Preference number: 4 (lower is better) Translates to: PRSPEMGALCVARPQPLPHPCPS*SPPLSL Trigger: AAGAGACAGTGGAGGGGACCAAGATGGACAGGGGTG...AGGCAGGGGCTGAGGGCGGGCAACACACAGGGCTCCCATCTCTGGTGATCTTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000053156.10 ENSMUST00000163504.8 |
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| CDS-3UTR TCA 90 bp | CCAAGATCACCAGAGATGGGAGCCCTGTGTGTTGCCCGCCCTCAGCCCCTGCCTGCCCACCTGCTCAGTTaGGTTCAGGTACTGAACGAT | + |
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Preference number: 4 (lower is better) Translates to: PRSPEMGALCVARPQPLPAHLLS*VQVLND Trigger: ATCGTTCAGTACCTGAACTCAACTGAGCAGGTGGGC...AGGCAGGGGCTGAGGGCGGGCAACACACAGGGCTCCCATCTCTGGTGATCTTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053156.10 ENSMUST00000163504.8 |
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| CDS-3UTR GCA 90 bp | CCAAGATCACCAGAGATGGGAGCCCTGTGTGTTGCCCGCCCTCAGCCCCTGCCTACGTGCTGCAGTAGATaGTGCTGTAGAAGCCGAAGC | + |
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Preference number: 4 (lower is better) Translates to: PRSPEMGALCVARPQPLPTCCSR*CCRSRS Trigger: GCTTCGGCTTCTACAGCAGCATCTACTGCAGCACGT...AGGCAGGGGCTGAGGGCGGGCAACACACAGGGCTCCCATCTCTGGTGATCTTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053156.10 ENSMUST00000163504.8 |
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| CDS-3UTR GCA 90 bp | TCAGCCCCTGCCTCAAGGCTGTGGCTTAGAGCTTTCCCGGCATTCCTCTTCTTCCCGCCAGCAGCCACGTaGTGCAGTAGATGCTGCTGT | + |
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Preference number: 4 (lower is better) Translates to: SAPASRLWLRAFPAFLFFPPAAT*CSRCCC Trigger: ACAGCAGCATCTACTGCAGCACGTGGCTGCTGGCGG...GAAGAAGAGGAATGCCGGGAAAGCTCTAAGCCACAGCCTTGAGGCAGGGGCTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053156.10 ENSMUST00000163504.8 |
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| CDS-3UTR TCA 90 bp | CCCGGCATAACAGTGGAGACAAGACCAAAATATGAAAATCAGCGGAGCACATGTGGCGAACCCGGCCCATaGAGGCCCGCAGGGCCAGCA | + |
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Preference number: 4 (lower is better) Translates to: PGITVETRPKYENQRSTCGEPGP*RPAGPA Trigger: TGCTGGCCCTGCGGGCCTTCATGGGCCGGGTTCGCC...ACATGTGCTCCGCTGATTTTCATATTTTGGTCTTGTCTCCACTGTTATGCCGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053156.10 ENSMUST00000163504.8 |
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| CDS-3UTR TCA 90 bp | TCAGCCCCTGCCTCAAGGCTGTGGCTTAGAGCTTTCCCGGCATTCCTCTTCTTCCCAGCTGCTCTTGGGTaGAGTTCTCGTAGCAGGTTA | + |
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Preference number: 4 (lower is better) Translates to: SAPASRLWLRAFPAFLFFPAALG*SSRSRL Trigger: TAACCTGCTACGAGAACTTCACCCAAGAGCAGCTGG...GAAGAAGAGGAATGCCGGGAAAGCTCTAAGCCACAGCCTTGAGGCAGGGGCTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053156.10 ENSMUST00000163504.8 |
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| CDS-3UTR TCA 90 bp | CATCTCCTAGACCCAGTGACTGGTGACACAGAGGATAAGCATGTGACCCAGATCAGTGGCCAAAGGACATaGTCCAGGCCACCAGAGCAG | + |
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Preference number: 4 (lower is better) Translates to: HLLDPVTGDTEDKHVTQISGQRT*SRPPEQ Trigger: CTGCTCTGGTGGCCTGGATCATGTCCTTTGGCCACT...GATCTGGGTCACATGCTTATCCTCTGTGTCACCAGTCACTGGGTCTAGGAGATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053156.10 ENSMUST00000163504.8 |
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| CDS-3UTR GCA 90 bp | AAGGGTGTAGCCATTCCTTCTTGTATCCTGGAGCTATGCTTCTCTGGGCAGGAACCGCCAGCAGCCACGTaGTGCAGTAGATGCTGCTGT | + |
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Preference number: 4 (lower is better) Translates to: KGVAIPSCILELCFSGQEPPAAT*CSRCCC Trigger: ACAGCAGCATCTACTGCAGCACGTGGCTGCTGGCGG...TTCCTGCCCAGAGAAGCATAGCTCCAGGATACAAGAAGGAATGGCTACACCCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053156.10 ENSMUST00000163504.8 |
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| CDS-3UTR TCA 90 bp | ATAACAGTGGAGACAAGACCAAAATATGAAAATCAGCGGAGCACATGTACAAAGTGCACAGGGGCAGGCTaGGGCTGGCGAACCCGGCCC | + |
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Preference number: 4 (lower is better) Translates to: ITVETRPKYENQRSTCTKCTGAG*GWRTRP Trigger: GGGCCGGGTTCGCCAGCCTCAGCCTGCCCCTGTGCA...CTTTGTACATGTGCTCCGCTGATTTTCATATTTTGGTCTTGTCTCCACTGTTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000053156.10 ENSMUST00000163504.8 |
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| CDS-3UTR TCA 90 bp | AGGGCAGTGGCAGATGGGTGGAGGTGTCTTTCTTTCTTTCTTTCTTTCTTTCTTGGTAGCGTTCCATGCTaGTGCCCGCCAGCAGCCACG | + |
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Preference number: 4 (lower is better) Translates to: RAVADGWRCLSFFLSFFLGSVPC*CPPAAT Trigger: CGTGGCTGCTGGCGGGCATCAGCATGGAACGCTACC...AAGAAAGAAAGAAAGAAAGAAAGAAAGACACCTCCACCCATCTGCCACTGCCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053156.10 ENSMUST00000163504.8 |
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| CDS-3UTR GCA 90 bp | ATCTTTTCCATTGGCTTCTTTCCAGCATCACCAGCCAGATCACTGTCTCTAGGTGCCCCAACGTGGGGCTaGGTGAGCATGATCCACACG | + |
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Preference number: 4 (lower is better) Translates to: IFSIGFFPASPARSLSLGAPTWG*VSMIHT Trigger: CGTGTGGATCATGCTCACGCAGCCCCACGTTGGGGC...ACCTAGAGACAGTGATCTGGCTGGTGATGCTGGAAAGAAGCCAATGGAAAAGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000053156.10 ENSMUST00000163504.8 |
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| CDS-3UTR CCA 90 bp | CATCTCCTAGACCCAGTGACTGGTGACACAGAGGATAAGCATGTGACCCAGATCGGTACCAGCGGAAGTTaGATGCTGCTTCCACGATCC | + |
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Preference number: 4 (lower is better) Translates to: HLLDPVTGDTEDKHVTQIGTSGS*MLLPRS Trigger: GGATCGTGGAAGCAGCATCCAACTTCCGCTGGTACC...GATCTGGGTCACATGCTTATCCTCTGTGTCACCAGTCACTGGGTCTAGGAGATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053156.10 ENSMUST00000163504.8 |
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| CDS-3UTR GCA 90 bp | AAGGGTGTAGCCATTCCTTCTTGTATCCTGGAGCTATGCTTCTCTGGGCAGGAACCAGCGGAAGTTGGATaGTGCTTCCACGATCCGGAA | + |
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Preference number: 4 (lower is better) Translates to: KGVAIPSCILELCFSGQEPAEVG*CFHDPE Trigger: TTCCGGATCGTGGAAGCAGCATCCAACTTCCGCTGG...TTCCTGCCCAGAGAAGCATAGCTCCAGGATACAAGAAGGAATGGCTACACCCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053156.10 ENSMUST00000163504.8 |
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| CDS-3UTR GCA 90 bp | CATCTCCTAGACCCAGTGACTGGTGACACAGAGGATAAGCATGTGACCCAGATCTGCTGCAGTAGATGCTaGTGTAGAAGCCGAAGCCTG | + |
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Preference number: 4 (lower is better) Translates to: HLLDPVTGDTEDKHVTQICCSRC*CRSRSL Trigger: CAGGCTTCGGCTTCTACAGCAGCATCTACTGCAGCA...GATCTGGGTCACATGCTTATCCTCTGTGTCACCAGTCACTGGGTCTAGGAGATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053156.10 ENSMUST00000163504.8 |
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| CDS-3UTR GCA 90 bp | AAGGGTGTAGCCATTCCTTCTTGTATCCTGGAGCTATGCTTCTCTGGGCAGGAACCAGCAGCCACGTGCTaGAGTAGATGCTGCTGTAGA | + |
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Preference number: 4 (lower is better) Translates to: KGVAIPSCILELCFSGQEPAATC*SRCCCR Trigger: TCTACAGCAGCATCTACTGCAGCACGTGGCTGCTGG...TTCCTGCCCAGAGAAGCATAGCTCCAGGATACAAGAAGGAATGGCTACACCCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053156.10 ENSMUST00000163504.8 |
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| CDS-3UTR GCA 90 bp | TCTTTTATCTTTTACCAAGTCTCAGGAGCTCTGCTAACCAGACCAACTTCTGGGGCCCCAACGTGGGGCTaGGTGAGCATGATCCACACG | + |
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Preference number: 4 (lower is better) Translates to: SFIFYQVSGALLTRPTSGAPTWG*VSMIHT Trigger: CGTGTGGATCATGCTCACGCAGCCCCACGTTGGGGC...CCCAGAAGTTGGTCTGGTTAGCAGAGCTCCTGAGACTTGGTAAAAGATAAAAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt. Matches the following 2 transcripts: ENSMUST00000053156.10 ENSMUST00000163504.8 |
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| CDS-3UTR GCA 90 bp | AAGGGTGTAGCCATTCCTTCTTGTATCCTGGAGCTATGCTTCTCTGGGCAGGAACTTTCCCAAAAGCTCTaGGCACCACGGAGGAGGAGA | + |
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Preference number: 4 (lower is better) Translates to: KGVAIPSCILELCFSGQELSQKL*APRRRR Trigger: TCTCCTCCTCCGTGGTGCGCAGAGCTTTTGGGAAAG...TTCCTGCCCAGAGAAGCATAGCTCCAGGATACAAGAAGGAATGGCTACACCCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053156.10 ENSMUST00000163504.8 |
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| CDS-3UTR TCA 90 bp | GATCCCGGCATAACAGTGGAGACAAGACCAAAATATGAAAATCAGCGGAGCACAAGTGGCCAAAGGACATaGTCCAGGCCACCAGAGCAG | + |
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Preference number: 4 (lower is better) Translates to: DPGITVETRPKYENQRSTSGQRT*SRPPEQ Trigger: CTGCTCTGGTGGCCTGGATCATGTCCTTTGGCCACT...TGTGCTCCGCTGATTTTCATATTTTGGTCTTGTCTCCACTGTTATGCCGGGATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053156.10 ENSMUST00000163504.8 |
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| CDS-3UTR GCA 90 bp | ATCTTTTCCATTGGCTTCTTTCCAGCATCACCAGCCAGATCACTGTCTCTAGGTCCAGCAGCCACGTGCTaGAGTAGATGCTGCTGTAGA | + |
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Preference number: 4 (lower is better) Translates to: IFSIGFFPASPARSLSLGPAATC*SRCCCR Trigger: TCTACAGCAGCATCTACTGCAGCACGTGGCTGCTGG...ACCTAGAGACAGTGATCTGGCTGGTGATGCTGGAAAGAAGCCAATGGAAAAGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053156.10 ENSMUST00000163504.8 |
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| CDS-3UTR GCA 90 bp | GATCCCGGCATAACAGTGGAGACAAGACCAAAATATGAAAATCAGCGGAGCACACTTTCCCAAAAGCTCTaGGCACCACGGAGGAGGAGA | + |
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Preference number: 4 (lower is better) Translates to: DPGITVETRPKYENQRSTLSQKL*APRRRR Trigger: TCTCCTCCTCCGTGGTGCGCAGAGCTTTTGGGAAAG...TGTGCTCCGCTGATTTTCATATTTTGGTCTTGTCTCCACTGTTATGCCGGGATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000053156.10 ENSMUST00000163504.8 |
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| CDS-3UTR CCA 90 bp | AAGGGTGTAGCCATTCCTTCTTGTATCCTGGAGCTATGCTTCTCTGGGCAGGAAATGACGATGGTGCAGTaGCCAAAGGACATGATCCAG | + |
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Preference number: 4 (lower is better) Translates to: KGVAIPSCILELCFSGQEMTMVQ*PKDMIQ Trigger: CTGGATCATGTCCTTTGGCCACTGCACCATCGTCAT...TTCCTGCCCAGAGAAGCATAGCTCCAGGATACAAGAAGGAATGGCTACACCCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053156.10 ENSMUST00000163504.8 |
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| CDS-3UTR TCA 90 bp | GATCCCGGCATAACAGTGGAGACAAGACCAAAATATGAAAATCAGCGGAGCACACCAGCTGCTCTTGGGTaGAGTTCTCGTAGCAGGTTA | + |
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Preference number: 4 (lower is better) Translates to: DPGITVETRPKYENQRSTPAALG*SSRSRL Trigger: TAACCTGCTACGAGAACTTCACCCAAGAGCAGCTGG...TGTGCTCCGCTGATTTTCATATTTTGGTCTTGTCTCCACTGTTATGCCGGGATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053156.10 ENSMUST00000163504.8 |
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| CDS-3UTR GCA 90 bp | ATCTTTTCCATTGGCTTCTTTCCAGCATCACCAGCCAGATCACTGTCTCTAGGTACGTGCTGCAGTAGATaGTGCTGTAGAAGCCGAAGC | + |
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Preference number: 4 (lower is better) Translates to: IFSIGFFPASPARSLSLGTCCSR*CCRSRS Trigger: GCTTCGGCTTCTACAGCAGCATCTACTGCAGCACGT...ACCTAGAGACAGTGATCTGGCTGGTGATGCTGGAAAGAAGCCAATGGAAAAGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053156.10 ENSMUST00000163504.8 |
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| CDS-3UTR GCA 90 bp | CATCTCCTAGACCCAGTGACTGGTGACACAGAGGATAAGCATGTGACCCAGATCACAGAAGATGGTGACTaGCATGGGAACGAAAAACAG | + |
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Preference number: 4 (lower is better) Translates to: HLLDPVTGDTEDKHVTQITEDGD*HGNEKQ Trigger: CTGTTTTTCGTTCCCATGGCAGTCACCATCTTCTGT...GATCTGGGTCACATGCTTATCCTCTGTGTCACCAGTCACTGGGTCTAGGAGATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053156.10 ENSMUST00000163504.8 |
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| CDS-3UTR CCA 90 bp | AGGGCAGTGGCAGATGGGTGGAGGTGTCTTTCTTTCTTTCTTTCTTTCTTTCTTGGTACCAGCGGAAGTTaGATGCTGCTTCCACGATCC | + |
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Preference number: 4 (lower is better) Translates to: RAVADGWRCLSFFLSFFLGTSGS*MLLPRS Trigger: GGATCGTGGAAGCAGCATCCAACTTCCGCTGGTACC...AAGAAAGAAAGAAAGAAAGAAAGAAAGACACCTCCACCCATCTGCCACTGCCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053156.10 ENSMUST00000163504.8 |
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| CDS-3UTR GCA 90 bp | CCCGGCATAACAGTGGAGACAAGACCAAAATATGAAAATCAGCGGAGCACATGTTTATTTGGTTCTCAGTaGCCACCTGCTCAGTTGAGT | + |
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Preference number: 4 (lower is better) Translates to: PGITVETRPKYENQRSTCLFGSQ*PPAQLS Trigger: ACTCAACTGAGCAGGTGGGCACTGAGAACCAAATAA...ACATGTGCTCCGCTGATTTTCATATTTTGGTCTTGTCTCCACTGTTATGCCGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053156.10 ENSMUST00000163504.8 |
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| CDS-3UTR GCA 90 bp | CCCGGCATAACAGTGGAGACAAGACCAAAATATGAAAATCAGCGGAGCACATGTACAGAAGATGGTGACTaGCATGGGAACGAAAAACAG | + |
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Preference number: 4 (lower is better) Translates to: PGITVETRPKYENQRSTCTEDGD*HGNEKQ Trigger: CTGTTTTTCGTTCCCATGGCAGTCACCATCTTCTGT...ACATGTGCTCCGCTGATTTTCATATTTTGGTCTTGTCTCCACTGTTATGCCGGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000053156.10 ENSMUST00000163504.8 |
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| CDS-3UTR TCA 90 bp | ATAACAGTGGAGACAAGACCAAAATATGAAAATCAGCGGAGCACATGTACAAAGGCCCACCTGCTCAGTTaGGTTCAGGTACTGAACGAT | + |
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Preference number: 4 (lower is better) Translates to: ITVETRPKYENQRSTCTKAHLLS*VQVLND Trigger: ATCGTTCAGTACCTGAACTCAACTGAGCAGGTGGGC...CTTTGTACATGTGCTCCGCTGATTTTCATATTTTGGTCTTGTCTCCACTGTTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053156.10 ENSMUST00000163504.8 |
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| CDS-3UTR TCA 90 bp | GATCCCGGCATAACAGTGGAGACAAGACCAAAATATGAAAATCAGCGGAGCACAAATAACAGAAGATGGTaGCTGCCATGGGAACGAAAA | + |
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Preference number: 4 (lower is better) Translates to: DPGITVETRPKYENQRSTNNRRW*LPWERK Trigger: TTTTCGTTCCCATGGCAGTCACCATCTTCTGTTATT...TGTGCTCCGCTGATTTTCATATTTTGGTCTTGTCTCCACTGTTATGCCGGGATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053156.10 ENSMUST00000163504.8 |
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| CDS-3UTR CCA 90 bp | ATAACAGTGGAGACAAGACCAAAATATGAAAATCAGCGGAGCACATGTACAAAGATGACGATGGTGCAGTaGCCAAAGGACATGATCCAG | + |
|
Preference number: 4 (lower is better) Translates to: ITVETRPKYENQRSTCTKMTMVQ*PKDMIQ Trigger: CTGGATCATGTCCTTTGGCCACTGCACCATCGTCAT...CTTTGTACATGTGCTCCGCTGATTTTCATATTTTGGTCTTGTCTCCACTGTTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053156.10 ENSMUST00000163504.8 |
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| CDS-3UTR TCA 90 bp | ATAACAGTGGAGACAAGACCAAAATATGAAAATCAGCGGAGCACATGTACAAAGAATAACAGAAGATGGTaGCTGCCATGGGAACGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: ITVETRPKYENQRSTCTKNNRRW*LPWERK Trigger: TTTTCGTTCCCATGGCAGTCACCATCTTCTGTTATT...CTTTGTACATGTGCTCCGCTGATTTTCATATTTTGGTCTTGTCTCCACTGTTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053156.10 ENSMUST00000163504.8 |
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| CDS TCA 90 bp | TTAAGAAGCGTCACAACAGCCAGGCCCACTGCCCGGCGTCGCCTCTaGGCCCCAACGTGGGGCTGCGTGAGCATGATCCACACGAAGCGC | + |
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Preference number: 5 (lower is better) Translates to: LRSVTTARPTARRRL*APTWGCVSMIHTKR Trigger: GCGCTTCGTGTGGATCATGCTCACGCAGCCCCACGTTGGGGCTCAGAGGCGACGCCGGGCAGTGGGCCTGGCTGTTGTGACGCTTCTTAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000053156.10 ENSMUST00000163504.8 ENSMUST00000168528.8 |
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| CDS GCA 90 bp | AAAGCACACCAGGAAATTAAGAAGCGTCACAACAGCCAGGCCCACTaGCCGGCGTCGCCTCTGAGCCCCAACGTGGGGCTGCGTGAGCAT | + |
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Preference number: 5 (lower is better) Translates to: KAHQEIKKRHNSQAH*PASPLSPNVGLREH Trigger: ATGCTCACGCAGCCCCACGTTGGGGCTCAGAGGCGACGCCGGGCAGTGGGCCTGGCTGTTGTGACGCTTCTTAATTTCCTGGTGTGCTTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000053156.10 ENSMUST00000163504.8 ENSMUST00000168528.8 |
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| CDS-3UTR CAA 90 bp | TCAGCCCCTGCCTCAAGGCTGTGGCTTAGAGCTTTCCCGGCATTCCTCTTCTTCGGCCGGCGGGATAACTaGTACTGCACCGGGAAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: SAPASRLWLRAFPAFLFFGRRDN*YCTGKA Trigger: GGCCTTCCCGGTGCAGTACAAGTTATCCCGCCGGCC...GAAGAAGAGGAATGCCGGGAAAGCTCTAAGCCACAGCCTTGAGGCAGGGGCTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053156.10 ENSMUST00000163504.8 |
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| CDS-3UTR CAA 90 bp | CCAAGATCACCAGAGATGGGAGCCCTGTGTGTTGCCCGCCCTCAGCCCCTGCCTTGCCCACCTGCTCAGTaGAGTTCAGGTACTGAACGA | + |
|
Preference number: 5 (lower is better) Translates to: PRSPEMGALCVARPQPLPCPPAQ*SSGTER Trigger: TCGTTCAGTACCTGAACTCAACTGAGCAGGTGGGCA...AGGCAGGGGCTGAGGGCGGGCAACACACAGGGCTCCCATCTCTGGTGATCTTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053156.10 ENSMUST00000163504.8 |
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| CDS-3UTR CAA 90 bp | CCAAGATCACCAGAGATGGGAGCCCTGTGTGTTGCCCGCCCTCAGCCCCTGCCTATAGAGGAGGCAGGATaGCGGATCAGTAGCAAACCT | + |
|
Preference number: 5 (lower is better) Translates to: PRSPEMGALCVARPQPLPIEEAG*RISSKP Trigger: AGGTTTGCTACTGATCCGCAATCCTGCCTCCTCTAT...AGGCAGGGGCTGAGGGCGGGCAACACACAGGGCTCCCATCTCTGGTGATCTTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053156.10 ENSMUST00000163504.8 |
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| CDS-3UTR CAA 90 bp | CATCTCCTAGACCCAGTGACTGGTGACACAGAGGATAAGCATGTGACCCAGATCTGCCCACCTGCTCAGTaGAGTTCAGGTACTGAACGA | + |
|
Preference number: 5 (lower is better) Translates to: HLLDPVTGDTEDKHVTQICPPAQ*SSGTER Trigger: TCGTTCAGTACCTGAACTCAACTGAGCAGGTGGGCA...GATCTGGGTCACATGCTTATCCTCTGTGTCACCAGTCACTGGGTCTAGGAGATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053156.10 ENSMUST00000163504.8 |
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| CDS-3UTR CAA 90 bp | CCCGGCATAACAGTGGAGACAAGACCAAAATATGAAAATCAGCGGAGCACATGTCCCTCCACTGTCTCTTaGGCTCCCCTGCCCAGCATA | + |
|
Preference number: 5 (lower is better) Translates to: PGITVETRPKYENQRSTCPSTVS*APLPSI Trigger: TATGCTGGGCAGGGGAGCCAAAGAGACAGTGGAGGG...ACATGTGCTCCGCTGATTTTCATATTTTGGTCTTGTCTCCACTGTTATGCCGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000053156.10 ENSMUST00000163504.8 |
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| CDS-3UTR CAA 90 bp | GATCCCGGCATAACAGTGGAGACAAGACCAAAATATGAAAATCAGCGGAGCACACCCTCCACTGTCTCTTaGGCTCCCCTGCCCAGCATA | + |
|
Preference number: 5 (lower is better) Translates to: DPGITVETRPKYENQRSTPSTVS*APLPSI Trigger: TATGCTGGGCAGGGGAGCCAAAGAGACAGTGGAGGG...TGTGCTCCGCTGATTTTCATATTTTGGTCTTGTCTCCACTGTTATGCCGGGATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000053156.10 ENSMUST00000163504.8 |
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| CDS TCA 90 bp | GTTATTTGGTTCTCAGTGCCCACCTGCTCAGTTGAGTTCAGGTACTaGACGATGATGACGATGGTGCAGTGGCCAAAGGACATGATCCAG | + |
|
Preference number: 5 (lower is better) Translates to: VIWFSVPTCSVEFRY*TMMTMVQWPKDMIQ Trigger: CTGGATCATGTCCTTTGGCCACTGCACCATCGTCATCATCGTTCAGTACCTGAACTCAACTGAGCAGGTGGGCACTGAGAACCAAATAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000053156.10 ENSMUST00000163504.8 ENSMUST00000168528.8 ENSMUST00000186339.7 |
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| CDS TCA 90 bp | GTTCTCGTAGCAGGTTATTTGGTTCTCAGTGCCCACCTGCTCAGTTaGGTTCAGGTACTGAACGATGATGACGATGGTGCAGTGGCCAAA | + |
|
Preference number: 5 (lower is better) Translates to: VLVAGYLVLSAHLLS*VQVLNDDDDGAVAK Trigger: TTTGGCCACTGCACCATCGTCATCATCGTTCAGTACCTGAACTCAACTGAGCAGGTGGGCACTGAGAACCAAATAACCTGCTACGAGAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000053156.10 ENSMUST00000163504.8 ENSMUST00000168528.8 ENSMUST00000186339.7 |
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| CDS-3UTR CAA 90 bp | TCTTTTATCTTTTACCAAGTCTCAGGAGCTCTGCTAACCAGACCAACTTCTGGGGCGCGCACACGATCTTaGGTAGGTACCAGCGGAAGT | + |
|
Preference number: 5 (lower is better) Translates to: SFIFYQVSGALLTRPTSGARTRS*VGTSGS Trigger: ACTTCCGCTGGTACCTACCAAAGATCGTGTGCGCGC...CCCAGAAGTTGGTCTGGTTAGCAGAGCTCCTGAGACTTGGTAAAAGATAAAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000053156.10 ENSMUST00000163504.8 |
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| CDS-3UTR CAA 90 bp | CCCGGCATAACAGTGGAGACAAGACCAAAATATGAAAATCAGCGGAGCACATGTGGATCCAGGCTGGCATaGAGGGAACTGAACACCACA | + |
|
Preference number: 5 (lower is better) Translates to: PGITVETRPKYENQRSTCGSRLA*RELNTT Trigger: TGTGGTGTTCAGTTCCCTCAATGCCAGCCTGGATCC...ACATGTGCTCCGCTGATTTTCATATTTTGGTCTTGTCTCCACTGTTATGCCGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053156.10 ENSMUST00000163504.8 |
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| CDS-3UTR CAA 90 bp | ATCTTTTCCATTGGCTTCTTTCCAGCATCACCAGCCAGATCACTGTCTCTAGGTGGATCCAGGCTGGCATaGAGGGAACTGAACACCACA | + |
|
Preference number: 5 (lower is better) Translates to: IFSIGFFPASPARSLSLGGSRLA*RELNTT Trigger: TGTGGTGTTCAGTTCCCTCAATGCCAGCCTGGATCC...ACCTAGAGACAGTGATCTGGCTGGTGATGCTGGAAAGAAGCCAATGGAAAAGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053156.10 ENSMUST00000163504.8 |
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| CDS-3UTR CAA 90 bp | AGGGCAGTGGCAGATGGGTGGAGGTGTCTTTCTTTCTTTCTTTCTTTCTTTCTTAGGTACCAGCGGAAGTaGGATGCTGCTTCCACGATC | + |
|
Preference number: 5 (lower is better) Translates to: RAVADGWRCLSFFLSFFLRYQRK*DAASTI Trigger: GATCGTGGAAGCAGCATCCAACTTCCGCTGGTACCT...AAGAAAGAAAGAAAGAAAGAAAGAAAGACACCTCCACCCATCTGCCACTGCCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053156.10 ENSMUST00000163504.8 |
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| CDS-3UTR CAA 90 bp | ATCTTTTCCATTGGCTTCTTTCCAGCATCACCAGCCAGATCACTGTCTCTAGGTCACATCCAGCTGCTCTaGGGTGAAGTTCTCGTAGCA | + |
|
Preference number: 5 (lower is better) Translates to: IFSIGFFPASPARSLSLGHIQLL*GEVLVA Trigger: TGCTACGAGAACTTCACCCAAGAGCAGCTGGATGTG...ACCTAGAGACAGTGATCTGGCTGGTGATGCTGGAAAGAAGCCAATGGAAAAGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053156.10 ENSMUST00000163504.8 |
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| CDS-3UTR CAA 90 bp | AGGGCAGTGGCAGATGGGTGGAGGTGTCTTTCTTTCTTTCTTTCTTTCTTTCTTCTCGTAGCAGGTTATTaGGTTCTCAGTGCCCACCTG | + |
|
Preference number: 5 (lower is better) Translates to: RAVADGWRCLSFFLSFFLLVAGY*VLSAHL Trigger: CAGGTGGGCACTGAGAACCAAATAACCTGCTACGAG...AAGAAAGAAAGAAAGAAAGAAAGAAAGACACCTCCACCCATCTGCCACTGCCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053156.10 ENSMUST00000163504.8 |
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| CDS-3UTR CAA 90 bp | ATAACAGTGGAGACAAGACCAAAATATGAAAATCAGCGGAGCACATGTACAAAGGCGCGCACACGATCTTaGGTAGGTACCAGCGGAAGT | + |
|
Preference number: 5 (lower is better) Translates to: ITVETRPKYENQRSTCTKARTRS*VGTSGS Trigger: ACTTCCGCTGGTACCTACCAAAGATCGTGTGCGCGC...CTTTGTACATGTGCTCCGCTGATTTTCATATTTTGGTCTTGTCTCCACTGTTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053156.10 ENSMUST00000163504.8 |
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| CDS-3UTR CAA 90 bp | AGGGCAGTGGCAGATGGGTGGAGGTGTCTTTCTTTCTTTCTTTCTTTCTTTCTTATAGAGGAGGCAGGATaGCGGATCAGTAGCAAACCT | + |
|
Preference number: 5 (lower is better) Translates to: RAVADGWRCLSFFLSFFLIEEAG*RISSKP Trigger: AGGTTTGCTACTGATCCGCAATCCTGCCTCCTCTAT...AAGAAAGAAAGAAAGAAAGAAAGAAAGACACCTCCACCCATCTGCCACTGCCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053156.10 ENSMUST00000163504.8 |
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| CDS-3UTR CAA 90 bp | ATAACAGTGGAGACAAGACCAAAATATGAAAATCAGCGGAGCACATGTACAAAGAGGTACCAGCGGAAGTaGGATGCTGCTTCCACGATC | + |
|
Preference number: 5 (lower is better) Translates to: ITVETRPKYENQRSTCTKRYQRK*DAASTI Trigger: GATCGTGGAAGCAGCATCCAACTTCCGCTGGTACCT...CTTTGTACATGTGCTCCGCTGATTTTCATATTTTGGTCTTGTCTCCACTGTTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053156.10 ENSMUST00000163504.8 |
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| CDS-3UTR CAA 90 bp | ATAACAGTGGAGACAAGACCAAAATATGAAAATCAGCGGAGCACATGTACAAAGCTCGTAGCAGGTTATTaGGTTCTCAGTGCCCACCTG | + |
|
Preference number: 5 (lower is better) Translates to: ITVETRPKYENQRSTCTKLVAGY*VLSAHL Trigger: CAGGTGGGCACTGAGAACCAAATAACCTGCTACGAG...CTTTGTACATGTGCTCCGCTGATTTTCATATTTTGGTCTTGTCTCCACTGTTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053156.10 ENSMUST00000163504.8 |
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| CDS-3UTR CAA 90 bp | ATAACAGTGGAGACAAGACCAAAATATGAAAATCAGCGGAGCACATGTACAAAGCACATCCAGCTGCTCTaGGGTGAAGTTCTCGTAGCA | + |
|
Preference number: 5 (lower is better) Translates to: ITVETRPKYENQRSTCTKHIQLL*GEVLVA Trigger: TGCTACGAGAACTTCACCCAAGAGCAGCTGGATGTG...CTTTGTACATGTGCTCCGCTGATTTTCATATTTTGGTCTTGTCTCCACTGTTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053156.10 ENSMUST00000163504.8 |
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| CDS TCA 72 bp | GCACAGGGGCAGGCTGAGGCTGGCGAACCCGGCCCATaGAGGCCCGCAGGGCCAGCAGGTTGGCAGGGAGCC | + |
|
Preference number: 6 (lower is better) Translates to: AQGQAEAGEPGP*RPAGPAGWQGA Trigger: GGCTCCCTGCCAACCTGCTGGCCCTGCGGGCCTTCATGGGCCGGGTTCGCCAGCCTCAGCCTGCCCCTGTGC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000053156.10 ENSMUST00000163504.8 ENSMUST00000168528.8 ENSMUST00000186059.2 ENSMUST00000186339.7 ENSMUST00000186534.2 |
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| CDS TCA 72 bp | GTCACAACAGCCAGGCCCACTGCCCGGCGTCGCCTCTaGGCCCCAACGTGGGGCTGCGTGAGCATGATCCAC | + |
|
Preference number: 6 (lower is better) Translates to: VTTARPTARRRL*APTWGCVSMIH Trigger: GTGGATCATGCTCACGCAGCCCCACGTTGGGGCTCAGAGGCGACGCCGGGCAGTGGGCCTGGCTGTTGTGAC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000053156.10 ENSMUST00000163504.8 ENSMUST00000168528.8 |
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| CDS CCA 72 bp | GCGCGCACACGATCTTTGGTAGGTACCAGCGGAAGTTaGATGCTGCTTCCACGATCCGGAAGGGCAGCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: ARTRSLVGTSGS*MLLPRSGRAAA Trigger: TGCTGCTGCCCTTCCGGATCGTGGAAGCAGCATCCAACTTCCGCTGGTACCTACCAAAGATCGTGTGCGCGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000053156.10 ENSMUST00000163504.8 ENSMUST00000168528.8 ENSMUST00000186059.2 ENSMUST00000186339.7 ENSMUST00000186534.2 |
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| CDS CAA 72 bp | AGCGCGCACACGATCTTTGGTAGGTACCAGCGGAAGTaGGATGCTGCTTCCACGATCCGGAAGGGCAGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: SAHTIFGRYQRK*DAASTIRKGSS Trigger: GCTGCTGCCCTTCCGGATCGTGGAAGCAGCATCCAACTTCCGCTGGTACCTACCAAAGATCGTGTGCGCGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000053156.10 ENSMUST00000163504.8 ENSMUST00000168528.8 ENSMUST00000186059.2 ENSMUST00000186339.7 ENSMUST00000186534.2 |
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| CDS CAA 90 bp | AGATGCTGCTGTAGAAGCCGAAGCCTGTCAGCGCGCACACGATCTTaGGTAGGTACCAGCGGAAGTTGGATGCTGCTTCCACGATCCGGA | + |
|
Preference number: 6 (lower is better) Translates to: RCCCRSRSLSARTRS*VGTSGSWMLLPRSG Trigger: TCCGGATCGTGGAAGCAGCATCCAACTTCCGCTGGTACCTACCAAAGATCGTGTGCGCGCTGACAGGCTTCGGCTTCTACAGCAGCATCT 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000053156.10 ENSMUST00000163504.8 ENSMUST00000168528.8 ENSMUST00000186059.2 ENSMUST00000186339.7 ENSMUST00000186534.2 |
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| CDS CAA 90 bp | TCCACTGTCTCTTTGGCTCCCCTGCCCAGCATAGAGGAGGCAGGATaGCGGATCAGTAGCAAACCTTTCCCAAAAGCTCTGCGCACCACG | + |
|
Preference number: 6 (lower is better) Translates to: STVSLAPLPSIEEAG*RISSKPFPKALRTT Trigger: CGTGGTGCGCAGAGCTTTTGGGAAAGGTTTGCTACTGATCCGCAATCCTGCCTCCTCTATGCTGGGCAGGGGAGCCAAAGAGACAGTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000053156.10 ENSMUST00000163504.8 ENSMUST00000168528.8 |
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| CDS CAA 72 bp | TCTTTGGCTCCCCTGCCCAGCATAGAGGAGGCAGGATaGCGGATCAGTAGCAAACCTTTCCCAAAAGCTCTG | + |
|
Preference number: 6 (lower is better) Translates to: SLAPLPSIEEAG*RISSKPFPKAL Trigger: CAGAGCTTTTGGGAAAGGTTTGCTACTGATCCGCAATCCTGCCTCCTCTATGCTGGGCAGGGGAGCCAAAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000053156.10 ENSMUST00000163504.8 ENSMUST00000168528.8 |
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| CDS TCA 72 bp | TTCTCAGTGCCCACCTGCTCAGTTGAGTTCAGGTACTaGACGATGATGACGATGGTGCAGTGGCCAAAGGAC | + |
|
Preference number: 6 (lower is better) Translates to: FSVPTCSVEFRY*TMMTMVQWPKD Trigger: GTCCTTTGGCCACTGCACCATCGTCATCATCGTTCAGTACCTGAACTCAACTGAGCAGGTGGGCACTGAGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000053156.10 ENSMUST00000163504.8 ENSMUST00000168528.8 ENSMUST00000186339.7 |
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| CDS GCA 72 bp | GATCCACACGAAGCGCCAATAACAGAAGATGGTGACTaGCATGGGAACGAAAAACAGGACCAGGCACAGCTC | + |
|
Preference number: 6 (lower is better) Translates to: DPHEAPITEDGD*HGNEKQDQAQL Trigger: GAGCTGTGCCTGGTCCTGTTTTTCGTTCCCATGGCAGTCACCATCTTCTGTTATTGGCGCTTCGTGTGGATC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000053156.10 ENSMUST00000163504.8 ENSMUST00000168528.8 |
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| CDS TCA 72 bp | GCAGGTTATTTGGTTCTCAGTGCCCACCTGCTCAGTTaGGTTCAGGTACTGAACGATGATGACGATGGTGCA | + |
|
Preference number: 6 (lower is better) Translates to: AGYLVLSAHLLS*VQVLNDDDDGA Trigger: TGCACCATCGTCATCATCGTTCAGTACCTGAACTCAACTGAGCAGGTGGGCACTGAGAACCAAATAACCTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000053156.10 ENSMUST00000163504.8 ENSMUST00000168528.8 ENSMUST00000186339.7 |
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