Pregenerated sensors for FFAR1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000044453Ensembl transcript IDs: ENSMUST00000052700.6
Found 109 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGAGGGAAGAGAGAGTCCAGGCTGACGGTGGCCAGCGGACTAAACTaGACAGTGAGAGGAGAGAGCGGGAGGGGAGCAAGAGAAGAGCCC | + |
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Preference number: 1 (lower is better) Translates to: RGKRESRLTVASGLN*TVRGESGRGAREEP Trigger: GGGCTCTTCTCTTGCTCCCCTCCCGCTCTCTCCTCTCACTGTCCAGTTTAGTCCGCTGGCCACCGTCAGCCTGGACTCTCTCTTCCCTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052700.6 |
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| 3UTR GCA 90 bp | AGGACGCTGTCCTCTCCAGGTGGAACCCTTCCCATGAGTGGTTTCTaGGATGGCTTTGGGCCAGGCCTCCTGAGTTGTGGTGGATCTGCC | + |
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Preference number: 1 (lower is better) Translates to: RTLSSPGGTLPMSGF*DGFGPGLLSCGGSA Trigger: GGCAGATCCACCACAACTCAGGAGGCCTGGCCCAAAGCCATCGCAGAAACCACTCATGGGAAGGGTTCCACCTGGAGAGGACAGCGTCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052700.6 |
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| 3UTR CCA 90 bp | CTCTCCAGGTGGAACCCTTCCCATGAGTGGTTTCTGCGATGGCTTTaGGCCAGGCCTCCTGAGTTGTGGTGGATCTGCCCTCTTGGGAGC | + |
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Preference number: 1 (lower is better) Translates to: LSRWNPSHEWFLRWL*ARPPELWWICPLGS Trigger: GCTCCCAAGAGGGCAGATCCACCACAACTCAGGAGGCCTGGCCCAAAGCCATCGCAGAAACCACTCATGGGAAGGGTTCCACCTGGAGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052700.6 |
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| 3UTR CCA 90 bp | CATGAGTGGTTTCTGCGATGGCTTTGGGCCAGGCCTCCTGAGTTGTaGTGGATCTGCCCTCTTGGGAGCCTGGCAGAGTCAGAGTCATCC | + |
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Preference number: 1 (lower is better) Translates to: HEWFLRWLWARPPEL*WICPLGSLAESESS Trigger: GGATGACTCTGACTCTGCCAGGCTCCCAAGAGGGCAGATCCACCACAACTCAGGAGGCCTGGCCCAAAGCCATCGCAGAAACCACTCATG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052700.6 |
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| 3UTR CCA 90 bp | CAAGCAAACATGCTACAGAATGGCATGGGTGTTGGCTCCCCCTGCTaGGCACTGAGTCTGGCTCACAACCTGCCCATTTGGGCACCTGGC | + |
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Preference number: 1 (lower is better) Translates to: QANMLQNGMGVGSPC*ALSLAHNLPIWAPG Trigger: GCCAGGTGCCCAAATGGGCAGGTTGTGAGCCAGACTCAGTGCCCAGCAGGGGGAGCCAACACCCATGCCATTCTGTAGCATGTTTGCTTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052700.6 |
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| 3UTR TCA 90 bp | ACATGCTACAGAATGGCATGGGTGTTGGCTCCCCCTGCTGGGCACTaGGTCTGGCTCACAACCTGCCCATTTGGGCACCTGGCTGAAATC | + |
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Preference number: 1 (lower is better) Translates to: TCYRMAWVLAPPAGH*VWLTTCPFGHLAEI Trigger: GATTTCAGCCAGGTGCCCAAATGGGCAGGTTGTGAGCCAGACTCAGTGCCCAGCAGGGGGAGCCAACACCCATGCCATTCTGTAGCATGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052700.6 |
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| 3UTR GCA 90 bp | TTTCTGCGATGGCTTTGGGCCAGGCCTCCTGAGTTGTGGTGGATCTaGCCTCTTGGGAGCCTGGCAGAGTCAGAGTCATCCAATTCCACG | + |
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Preference number: 1 (lower is better) Translates to: FLRWLWARPPELWWI*PLGSLAESESSNST Trigger: CGTGGAATTGGATGACTCTGACTCTGCCAGGCTCCCAAGAGGGCAGATCCACCACAACTCAGGAGGCCTGGCCCAAAGCCATCGCAGAAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052700.6 |
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| 3UTR GCA 90 bp | GGACAAGCAAACATGCTACAGAATGGCATGGGTGTTGGCTCCCCCTaGTGGGCACTGAGTCTGGCTCACAACCTGCCCATTTGGGCACCT | + |
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Preference number: 1 (lower is better) Translates to: GQANMLQNGMGVGSP*WALSLAHNLPIWAP Trigger: AGGTGCCCAAATGGGCAGGTTGTGAGCCAGACTCAGTGCCCAGCAGGGGGAGCCAACACCCATGCCATTCTGTAGCATGTTTGCTTGTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052700.6 |
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| 3UTR CCA 90 bp | GAGTGGTTTCTGCGATGGCTTTGGGCCAGGCCTCCTGAGTTGTGGTaGATCTGCCCTCTTGGGAGCCTGGCAGAGTCAGAGTCATCCAAT | + |
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Preference number: 1 (lower is better) Translates to: EWFLRWLWARPPELW*ICPLGSLAESESSN Trigger: ATTGGATGACTCTGACTCTGCCAGGCTCCCAAGAGGGCAGATCCACCACAACTCAGGAGGCCTGGCCCAAAGCCATCGCAGAAACCACTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052700.6 |
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| 3UTR CCA 90 bp | GATGCTCCCTGGACAAGCAAACATGCTACAGAATGGCATGGGTGTTaGCTCCCCCTGCTGGGCACTGAGTCTGGCTCACAACCTGCCCAT | + |
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Preference number: 1 (lower is better) Translates to: DAPWTSKHATEWHGC*LPLLGTESGSQPAH Trigger: ATGGGCAGGTTGTGAGCCAGACTCAGTGCCCAGCAGGGGGAGCCAACACCCATGCCATTCTGTAGCATGTTTGCTTGTCCAGGGAGCATC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052700.6 |
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| 3UTR TCA 90 bp | TCTGAGTGGTACCGGCAACTACCTACTCCTCTCCGCAGTTGCCTCTaGTGGAGCTCAGGCCGGCAAAGCCCTTTCTTTCCCTGTTTCAAG | + |
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Preference number: 1 (lower is better) Translates to: SEWYRQLPTPLRSCL*WSSGRQSPFFPCFK Trigger: CTTGAAACAGGGAAAGAAAGGGCTTTGCCGGCCTGAGCTCCATCAGAGGCAACTGCGGAGAGGAGTAGGTAGTTGCCGGTACCACTCAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052700.6 |
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| 3UTR GCA 90 bp | CATGAGAAGAACAAACTTGATTCTGATACCTGGCCTCCCCGGAGATaGCCAAGTGTCTGTCTCCTTCATGGCCACTCTCCTCTGGCCTCC | + |
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Preference number: 1 (lower is better) Translates to: HEKNKLDSDTWPPRR*PSVCLLHGHSPLAS Trigger: GGAGGCCAGAGGAGAGTGGCCATGAAGGAGACAGACACTTGGGCATCTCCGGGGAGGCCAGGTATCAGAATCAAGTTTGTTCTTCTCATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052700.6 |
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| 3UTR TCA 90 bp | GTCATCCTCATCCCAGACCTAGTGACCTTGGCTCACAGGCGGAAATaGCCCCTCAACAGACAGATGCATCGGGATAATGGCATAATCAGG | + |
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Preference number: 1 (lower is better) Translates to: VILIPDLVTLAHRRK*PLNRQMHRDNGIIR Trigger: CCTGATTATGCCATTATCCCGATGCATCTGTCTGTTGAGGGGTCATTTCCGCCTGTGAGCCAAGGTCACTAGGTCTGGGATGAGGATGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052700.6 |
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| 3UTR CCA 90 bp | TCGCTGAAGCTGAACGTTCAGTGCTGTCCCCTAGTGGATTCAGCGTaGTATGGCAGGGCCATGATGCTGCCTCTTTTCTTCAGACATGAA | + |
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Preference number: 1 (lower is better) Translates to: SLKLNVQCCPLVDSA*YGRAMMLPLFFRHE Trigger: TTCATGTCTGAAGAAAAGAGGCAGCATCATGGCCCTGCCATACCACGCTGAATCCACTAGGGGACAGCACTGAACGTTCAGCTTCAGCGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052700.6 |
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| 3UTR GCA 90 bp | AGGAGTCACAGGTACAGAGGGATGCTGGGAGAGCTGGCCAGCATCTaGCTTGATATGTTAAATAGTCACCCCAGCCATTACTACAGTCCT | + |
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Preference number: 1 (lower is better) Translates to: RSHRYRGMLGELASI*LDMLNSHPSHYYSP Trigger: AGGACTGTAGTAATGGCTGGGGTGACTATTTAACATATCAAGGCAGATGCTGGCCAGCTCTCCCAGCATCCCTCTGTACCTGTGACTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052700.6 |
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| 3UTR TCA 90 bp | TACACAGAAGGGTTGTTTGACGATGAAATGAGACACCCTGAAGGATaGGACTCTGAGTGGTACCGGCAACTACCTACTCCTCTCCGCAGT | + |
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Preference number: 1 (lower is better) Translates to: YTEGLFDDEMRHPEG*DSEWYRQLPTPLRS Trigger: ACTGCGGAGAGGAGTAGGTAGTTGCCGGTACCACTCAGAGTCTCATCCTTCAGGGTGTCTCATTTCATCGTCAAACAACCCTTCTGTGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052700.6 |
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| 3UTR GCA 90 bp | CAGTTAGCTGAAGGAGTGTGTGGTGTCAGCTCAAATCTGAAAAGATaGTCCCTGGACAAGCAAACATGCTACAGAATGGCATGGGTGTTG | + |
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Preference number: 1 (lower is better) Translates to: QLAEGVCGVSSNLKR*SLDKQTCYRMAWVL Trigger: CAACACCCATGCCATTCTGTAGCATGTTTGCTTGTCCAGGGAGCATCTTTTCAGATTTGAGCTGACACCACACACTCCTTCAGCTAACTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052700.6 |
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| 3UTR CCA 90 bp | GAATATTTATTGAAGAGGCTTGAACACGCGCACATTCTCAAACACTaGCTCATGCGTCATCCTCATCCCAGACCTAGTGACCTTGGCTCA | + |
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Preference number: 1 (lower is better) Translates to: EYLLKRLEHAHILKH*LMRHPHPRPSDLGS Trigger: TGAGCCAAGGTCACTAGGTCTGGGATGAGGATGACGCATGAGCCAGTGTTTGAGAATGTGCGCGTGTTCAAGCCTCTTCAATAAATATTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052700.6 |
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| 3UTR TCA 90 bp | AGCGTGGTATGGCAGGGCCATGATGCTGCCTCTTTTCTTCAGACATaGAAATGTTCTTATCTCAGGGAAACACTCCAAAACTGGGTCATG | + |
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Preference number: 1 (lower is better) Translates to: SVVWQGHDAASFLQT*KCSYLRETLQNWVM Trigger: CATGACCCAGTTTTGGAGTGTTTCCCTGAGATAAGAACATTTTCATGTCTGAAGAAAAGAGGCAGCATCATGGCCCTGCCATACCACGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052700.6 |
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| 3UTR TCA 90 bp | TATGGAGTGGTGGTGGTGAAGTACCTGGATAAAGATCAGGGCTGCTaGATAAAGAATAAAGTCAGTGGCTGCATTGAGCACTTGCCTAGG | + |
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Preference number: 1 (lower is better) Translates to: YGVVVVKYLDKDQGC*IKNKVSGCIEHLPR Trigger: CCTAGGCAAGTGCTCAATGCAGCCACTGACTTTATTCTTTATTCAGCAGCCCTGATCTTTATCCAGGTACTTCACCACCACCACTCCATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052700.6 |
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| 3UTR TCA 90 bp | GTGAGCCAAGCAGTCTTTATTGCTTTGGGGCTTGCATTAAGTGAATaGCTAAATAATAAAGATGTAGATGCTAAAAGGAGGCTCTGTCTC | + |
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Preference number: 1 (lower is better) Translates to: VSQAVFIALGLALSE*LNNKDVDAKRRLCL Trigger: GAGACAGAGCCTCCTTTTAGCATCTACATCTTTATTATTTAGTCATTCACTTAATGCAAGCCCCAAAGCAATAAAGACTGCTTGGCTCAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052700.6 |
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| 3UTR-3UTR TCA 90 bp | CACTGGCTCATGCGTCATCCTCATCCCAGACCTAGTGACCTTGGCTCACAGGCGCCCCCTGCTGGGCACTaGGTCTGGCTCACAACCTGC | + |
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Preference number: 2 (lower is better) Translates to: HWLMRHPHPRPSDLGSQAPPAGH*VWLTTC Trigger: GCAGGTTGTGAGCCAGACTCAGTGCCCAGCAGGGGG...CGCCTGTGAGCCAAGGTCACTAGGTCTGGGATGAGGATGACGCATGAGCCAGTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052700.6 |
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| 3UTR CAA 90 bp | GATGGCTTTGGGCCAGGCCTCCTGAGTTGTGGTGGATCTGCCCTCTaGGGAGCCTGGCAGAGTCAGAGTCATCCAATTCCACGCAGTGCC | + |
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Preference number: 2 (lower is better) Translates to: DGFGPGLLSCGGSAL*GAWQSQSHPIPRSA Trigger: GGCACTGCGTGGAATTGGATGACTCTGACTCTGCCAGGCTCCCAAGAGGGCAGATCCACCACAACTCAGGAGGCCTGGCCCAAAGCCATC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052700.6 |
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| 3UTR CAA 90 bp | TCCCATGAGTGGTTTCTGCGATGGCTTTGGGCCAGGCCTCCTGAGTaGTGGTGGATCTGCCCTCTTGGGAGCCTGGCAGAGTCAGAGTCA | + |
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Preference number: 2 (lower is better) Translates to: SHEWFLRWLWARPPE*WWICPLGSLAESES Trigger: TGACTCTGACTCTGCCAGGCTCCCAAGAGGGCAGATCCACCACAACTCAGGAGGCCTGGCCCAAAGCCATCGCAGAAACCACTCATGGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052700.6 |
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| 3UTR-3UTR CCA 90 bp | CACTGGCTCATGCGTCATCCTCATCCCAGACCTAGTGACCTTGGCTCACAGGCGGTGGATCTGCCCTCTTaGGAGCCTGGCAGAGTCAGA | + |
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Preference number: 2 (lower is better) Translates to: HWLMRHPHPRPSDLGSQAVDLPS*EPGRVR Trigger: TCTGACTCTGCCAGGCTCCCAAGAGGGCAGATCCAC...CGCCTGTGAGCCAAGGTCACTAGGTCTGGGATGAGGATGACGCATGAGCCAGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052700.6 |
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| 3UTR-3UTR CCA 90 bp | CACTGGCTCATGCGTCATCCTCATCCCAGACCTAGTGACCTTGGCTCACAGGCGGGATGCTGGGAGAGCTaGCCAGCATCTGCCTTGATA | + |
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Preference number: 2 (lower is better) Translates to: HWLMRHPHPRPSDLGSQAGCWES*PASALI Trigger: TATCAAGGCAGATGCTGGCCAGCTCTCCCAGCATCC...CGCCTGTGAGCCAAGGTCACTAGGTCTGGGATGAGGATGACGCATGAGCCAGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052700.6 |
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| 3UTR-3UTR GCA 90 bp | CACTGGCTCATGCGTCATCCTCATCCCAGACCTAGTGACCTTGGCTCACAGGCGCTGAGTGAATCACTCTaGTCTCATGGGCCCCAGGAA | + |
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Preference number: 2 (lower is better) Translates to: HWLMRHPHPRPSDLGSQALSESL*SHGPQE Trigger: TTCCTGGGGCCCATGAGAGCAGAGTGATTCACTCAG...CGCCTGTGAGCCAAGGTCACTAGGTCTGGGATGAGGATGACGCATGAGCCAGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052700.6 |
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| 3UTR-3UTR CCA 90 bp | GGCTGTCCTAGAACTCACCAAGTAGACCAGGATGGCTTTGACCTCACAGAGGTCGCTGTCCTCTCCAGGTaGAACCCTTCCCATGAGTGG | + |
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Preference number: 2 (lower is better) Translates to: GCPRTHQVDQDGFDLTEVAVLSR*NPSHEW Trigger: CCACTCATGGGAAGGGTTCCACCTGGAGAGGACAGC...GACCTCTGTGAGGTCAAAGCCATCCTGGTCTACTTGGTGAGTTCTAGGACAGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052700.6 |
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| 3UTR-3UTR CCA 90 bp | GAGGTTAGGGTAGGGGCAGGCCGAGAAGTGCTAGAGGAGTCACAGGTACAGAGGAAACATGCTACAGAATaGCATGGGTGTTGGCTCCCC | + |
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Preference number: 2 (lower is better) Translates to: EVRVGAGREVLEESQVQRKHATE*HGCWLP Trigger: GGGGAGCCAACACCCATGCCATTCTGTAGCATGTTT...CCTCTGTACCTGTGACTCCTCTAGCACTTCTCGGCCTGCCCCTACCCTAACCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052700.6 |
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| 3UTR-3UTR GCA 90 bp | AGAGGCCAAAAGACTGGTGTAGCCAGGTGGCTGAGCTATATAGGGATCAGGCTAGAGTTGTGGTGGATCTaGCCTCTTGGGAGCCTGGCA | + |
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Preference number: 2 (lower is better) Translates to: RGQKTGVARWLSYIGIRLELWWI*PLGSLA Trigger: TGCCAGGCTCCCAAGAGGGCAGATCCACCACAACTC...TAGCCTGATCCCTATATAGCTCAGCCACCTGGCTACACCAGTCTTTTGGCCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052700.6 |
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| 3UTR-3UTR GCA 90 bp | CACTGGCTCATGCGTCATCCTCATCCCAGACCTAGTGACCTTGGCTCACAGGCGCTGGACAAGCAAACATaGTACAGAATGGCATGGGTG | + |
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Preference number: 2 (lower is better) Translates to: HWLMRHPHPRPSDLGSQALDKQT*YRMAWV Trigger: CACCCATGCCATTCTGTAGCATGTTTGCTTGTCCAG...CGCCTGTGAGCCAAGGTCACTAGGTCTGGGATGAGGATGACGCATGAGCCAGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052700.6 |
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| 3UTR-3UTR CCA 90 bp | GGCTGTCCTAGAACTCACCAAGTAGACCAGGATGGCTTTGACCTCACAGAGGTCTGCTACAGAATGGCATaGGTGTTGGCTCCCCCTGCT | + |
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Preference number: 2 (lower is better) Translates to: GCPRTHQVDQDGFDLTEVCYRMA*VLAPPA Trigger: AGCAGGGGGAGCCAACACCCATGCCATTCTGTAGCA...GACCTCTGTGAGGTCAAAGCCATCCTGGTCTACTTGGTGAGTTCTAGGACAGCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052700.6 |
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| 3UTR-3UTR TCA 90 bp | ATAGGACATCAAGAAAGCTTCCTACCATCTCCAAAACGAAGGTGGTCAGCACCATTGGGCCAGGCCTCCTaGGTTGTGGTGGATCTGCCC | + |
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Preference number: 2 (lower is better) Translates to: IGHQESFLPSPKRRWSAPLGQAS*VVVDLP Trigger: GGGCAGATCCACCACAACTCAGGAGGCCTGGCCCAA...TGGTGCTGACCACCTTCGTTTTGGAGATGGTAGGAAGCTTTCTTGATGTCCTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052700.6 |
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| 3UTR-3UTR TCA 90 bp | AGAGGCCAAAAGACTGGTGTAGCCAGGTGGCTGAGCTATATAGGGATCAGGCTAGTGGAACCCTTCCCATaGGTGGTTTCTGCGATGGCT | + |
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Preference number: 2 (lower is better) Translates to: RGQKTGVARWLSYIGIRLVEPFP*VVSAMA Trigger: AGCCATCGCAGAAACCACTCATGGGAAGGGTTCCAC...TAGCCTGATCCCTATATAGCTCAGCCACCTGGCTACACCAGTCTTTTGGCCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052700.6 |
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| 3UTR-3UTR TCA 90 bp | CACTGGCTCATGCGTCATCCTCATCCCAGACCTAGTGACCTTGGCTCACAGGCGTGTTTGACGATGAAATaGGACACCCTGAAGGATGAG | + |
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Preference number: 2 (lower is better) Translates to: HWLMRHPHPRPSDLGSQACLTMK*DTLKDE Trigger: CTCATCCTTCAGGGTGTCTCATTTCATCGTCAAACA...CGCCTGTGAGCCAAGGTCACTAGGTCTGGGATGAGGATGACGCATGAGCCAGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052700.6 |
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| 3UTR CAA 90 bp | GTCTCCTGGGGGAGTTGGATATCAAGAGATCTAGTTGGAAGTGGGTaGGCTCCACTCAGCAGAGGAAGCCTGAGTGAATCACTCTGCTCT | + |
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Preference number: 2 (lower is better) Translates to: VSWGSWISRDLVGSG*APLSRGSLSESLCS Trigger: AGAGCAGAGTGATTCACTCAGGCTTCCTCTGCTGAGTGGAGCCAACCCACTTCCAACTAGATCTCTTGATATCCAACTCCCCCAGGAGAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052700.6 |
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| 3UTR-3UTR TCA 90 bp | GAAGAGCCCCTGTCAAAGAGGATCCAGTCAAGAGGCCAAAAGACTGGTGTAGCCGTGTCAGCTCAAATCTaGAAAGATGCTCCCTGGACA | + |
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Preference number: 2 (lower is better) Translates to: EEPLSKRIQSRGQKTGVAVSAQI*KDAPWT Trigger: TGTCCAGGGAGCATCTTTTCAGATTTGAGCTGACAC...GGCTACACCAGTCTTTTGGCCTCTTGACTGGATCCTCTTTGACAGGGGCTCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052700.6 |
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| 3UTR-3UTR GCA 90 bp | CACTGGCTCATGCGTCATCCTCATCCCAGACCTAGTGACCTTGGCTCACAGGCGCTACTACATGCTGATTaGAGAATGCCTACTATGTGT | + |
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Preference number: 2 (lower is better) Translates to: HWLMRHPHPRPSDLGSQALLHAD*RMPTMC Trigger: ACACATAGTAGGCATTCTGCAATCAGCATGTAGTAG...CGCCTGTGAGCCAAGGTCACTAGGTCTGGGATGAGGATGACGCATGAGCCAGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052700.6 |
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| 3UTR-3UTR CCA 90 bp | AGAGGCCAAAAGACTGGTGTAGCCAGGTGGCTGAGCTATATAGGGATCAGGCTAGTGTGTGTGTGTGTGTaGTATGTATGGAGTGGTGGT | + |
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Preference number: 2 (lower is better) Translates to: RGQKTGVARWLSYIGIRLVCVCV*YVWSGG Trigger: ACCACCACTCCATACATACCACACACACACACACAC...TAGCCTGATCCCTATATAGCTCAGCCACCTGGCTACACCAGTCTTTTGGCCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052700.6 |
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| 3UTR-3UTR CCA 90 bp | CTTCTCCTCCTTCTCCAAATGATGACCAATATAGCTGACACCACTAGTTTTTCTGTTGGCTCCCCCTGCTaGGCACTGAGTCTGGCTCAC | + |
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Preference number: 2 (lower is better) Translates to: LLLLLQMMTNIADTTSFSVGSPC*ALSLAH Trigger: GTGAGCCAGACTCAGTGCCCAGCAGGGGGAGCCAAC...AGAAAAACTAGTGGTGTCAGCTATATTGGTCATCATTTGGAGAAGGAGGAGAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000052700.6 |
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| 3UTR-3UTR GCA 90 bp | CTTCTCCTCCTTCTCCAAATGATGACCAATATAGCTGACACCACTAGTTTTTCTCCCATGAGTGGTTTCTaGGATGGCTTTGGGCCAGGC | + |
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Preference number: 2 (lower is better) Translates to: LLLLLQMMTNIADTTSFSPMSGF*DGFGPG Trigger: GCCTGGCCCAAAGCCATCGCAGAAACCACTCATGGG...AGAAAAACTAGTGGTGTCAGCTATATTGGTCATCATTTGGAGAAGGAGGAGAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052700.6 |
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| 3UTR-3UTR GCA 90 bp | AGCCATTACTACAGTCCTGCTCTCTACAGAATACCAAATAAGCAACACAGAACTTGGCCTCCCCGGAGATaGCCAAGTGTCTGTCTCCTT | + |
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Preference number: 2 (lower is better) Translates to: SHYYSPALYRIPNKQHRTWPPRR*PSVCLL Trigger: AAGGAGACAGACACTTGGGCATCTCCGGGGAGGCCA...AGTTCTGTGTTGCTTATTTGGTATTCTGTAGAGAGCAGGACTGTAGTAATGGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052700.6 |
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| 3UTR-3UTR TCA 90 bp | ATAGGACATCAAGAAAGCTTCCTACCATCTCCAAAACGAAGGTGGTCAGCACCATCCAAAACTGGGTCATaGTGGTGGTATTCCTCCAGA | + |
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Preference number: 2 (lower is better) Translates to: IGHQESFLPSPKRRWSAPSKTGS*WWYSSR Trigger: TCTGGAGGAATACCACCATCATGACCCAGTTTTGGA...TGGTGCTGACCACCTTCGTTTTGGAGATGGTAGGAAGCTTTCTTGATGTCCTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052700.6 |
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| 3UTR-3UTR CCA 90 bp | AGCCATTACTACAGTCCTGCTCTCTACAGAATACCAAATAAGCAACACAGAACTCTCCCTTTCATGGGCTaGGGTGTGCTTCTCCTCCTT | + |
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Preference number: 2 (lower is better) Translates to: SHYYSPALYRIPNKQHRTLPFMG*GVLLLL Trigger: AAGGAGGAGAAGCACACCCCAGCCCATGAAAGGGAG...AGTTCTGTGTTGCTTATTTGGTATTCTGTAGAGAGCAGGACTGTAGTAATGGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052700.6 |
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| 3UTR-3UTR GCA 90 bp | AGCCATTACTACAGTCCTGCTCTCTACAGAATACCAAATAAGCAACACAGAACTGCTCTGTTTCCTAAGTaGTGTGGATCTACTGCTCAA | + |
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Preference number: 2 (lower is better) Translates to: SHYYSPALYRIPNKQHRTALFPK*CGSTAQ Trigger: TTGAGCAGTAGATCCACAGCACTTAGGAAACAGAGC...AGTTCTGTGTTGCTTATTTGGTATTCTGTAGAGAGCAGGACTGTAGTAATGGCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052700.6 |
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| 3UTR CCA 72 bp | CTGCGATGGCTTTGGGCCAGGCCTCCTGAGTTGTGGTaGATCTGCCCTCTTGGGAGCCTGGCAGAGTCAGAG | + |
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Preference number: 3 (lower is better) Translates to: LRWLWARPPELW*ICPLGSLAESE Trigger: CTCTGACTCTGCCAGGCTCCCAAGAGGGCAGATCCACCACAACTCAGGAGGCCTGGCCCAAAGCCATCGCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052700.6 |
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| 3UTR-3UTR CAA 90 bp | CACTGGCTCATGCGTCATCCTCATCCCAGACCTAGTGACCTTGGCTCACAGGCGAGAATGGCATGGGTGTaGGCTCCCCCTGCTGGGCAC | + |
|
Preference number: 3 (lower is better) Translates to: HWLMRHPHPRPSDLGSQARMAWV*APPAGH Trigger: GTGCCCAGCAGGGGGAGCCAACACCCATGCCATTCT...CGCCTGTGAGCCAAGGTCACTAGGTCTGGGATGAGGATGACGCATGAGCCAGTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052700.6 |
||
| 3UTR TCA 72 bp | CAAGGACGCTGTCCTCTCCAGGTGGAACCCTTCCCATaGGTGGTTTCTGCGATGGCTTTGGGCCAGGCCTCC | + |
|
Preference number: 3 (lower is better) Translates to: QGRCPLQVEPFP*VVSAMALGQAS Trigger: GGAGGCCTGGCCCAAAGCCATCGCAGAAACCACTCATGGGAAGGGTTCCACCTGGAGAGGACAGCGTCCTTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052700.6 |
||
| 3UTR TCA 72 bp | AGAATGGCATGGGTGTTGGCTCCCCCTGCTGGGCACTaGGTCTGGCTCACAACCTGCCCATTTGGGCACCTG | + |
|
Preference number: 3 (lower is better) Translates to: RMAWVLAPPAGH*VWLTTCPFGHL Trigger: CAGGTGCCCAAATGGGCAGGTTGTGAGCCAGACTCAGTGCCCAGCAGGGGGAGCCAACACCCATGCCATTCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052700.6 |
||
| 3UTR GCA 72 bp | TGGCTTTGGGCCAGGCCTCCTGAGTTGTGGTGGATCTaGCCTCTTGGGAGCCTGGCAGAGTCAGAGTCATCC | + |
|
Preference number: 3 (lower is better) Translates to: WLWARPPELWWI*PLGSLAESESS Trigger: GGATGACTCTGACTCTGCCAGGCTCCCAAGAGGGCAGATCCACCACAACTCAGGAGGCCTGGCCCAAAGCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052700.6 |
||
| 3UTR CCA 72 bp | TTTCTGCGATGGCTTTGGGCCAGGCCTCCTGAGTTGTaGTGGATCTGCCCTCTTGGGAGCCTGGCAGAGTCA | + |
|
Preference number: 3 (lower is better) Translates to: FLRWLWARPPEL*WICPLGSLAES Trigger: TGACTCTGCCAGGCTCCCAAGAGGGCAGATCCACCACAACTCAGGAGGCCTGGCCCAAAGCCATCGCAGAAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052700.6 |
||
| 3UTR TCA 72 bp | TACCGGCAACTACCTACTCCTCTCCGCAGTTGCCTCTaGTGGAGCTCAGGCCGGCAAAGCCCTTTCTTTCCC | + |
|
Preference number: 3 (lower is better) Translates to: YRQLPTPLRSCL*WSSGRQSPFFP Trigger: GGGAAAGAAAGGGCTTTGCCGGCCTGAGCTCCATCAGAGGCAACTGCGGAGAGGAGTAGGTAGTTGCCGGTA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052700.6 |
||
| 3UTR CCA 72 bp | TGGAACCCTTCCCATGAGTGGTTTCTGCGATGGCTTTaGGCCAGGCCTCCTGAGTTGTGGTGGATCTGCCCT | + |
|
Preference number: 3 (lower is better) Translates to: WNPSHEWFLRWL*ARPPELWWICP Trigger: AGGGCAGATCCACCACAACTCAGGAGGCCTGGCCCAAAGCCATCGCAGAAACCACTCATGGGAAGGGTTCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052700.6 |
||
| 3UTR-3UTR CAA 90 bp | AGAGGCCAAAAGACTGGTGTAGCCAGGTGGCTGAGCTATATAGGGATCAGGCTAGGTGGATCTGCCCTCTaGGGAGCCTGGCAGAGTCAG | + |
|
Preference number: 3 (lower is better) Translates to: RGQKTGVARWLSYIGIRLGGSAL*GAWQSQ Trigger: CTGACTCTGCCAGGCTCCCAAGAGGGCAGATCCACC...TAGCCTGATCCCTATATAGCTCAGCCACCTGGCTACACCAGTCTTTTGGCCTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052700.6 |
||
| 3UTR TCA 72 bp | TTGGAAGTGGGTTGGCTCCACTCAGCAGAGGAAGCCTaGGTGAATCACTCTGCTCTCATGGGCCCCAGGAAG | + |
|
Preference number: 3 (lower is better) Translates to: LEVGWLHSAEEA*VNHSALMGPRK Trigger: CTTCCTGGGGCCCATGAGAGCAGAGTGATTCACTCAGGCTTCCTCTGCTGAGTGGAGCCAACCCACTTCCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052700.6 |
||
| 3UTR GCA 72 bp | AACATGCTACAGAATGGCATGGGTGTTGGCTCCCCCTaGTGGGCACTGAGTCTGGCTCACAACCTGCCCATT | + |
|
Preference number: 3 (lower is better) Translates to: NMLQNGMGVGSP*WALSLAHNLPI Trigger: AATGGGCAGGTTGTGAGCCAGACTCAGTGCCCAGCAGGGGGAGCCAACACCCATGCCATTCTGTAGCATGTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052700.6 |
||
| 3UTR GCA 72 bp | GCTCCACTCAGCAGAGGAAGCCTGAGTGAATCACTCTaGTCTCATGGGCCCCAGGAAGGAAGTGGATTGTCC | + |
|
Preference number: 3 (lower is better) Translates to: APLSRGSLSESL*SHGPQEGSGLS Trigger: GGACAATCCACTTCCTTCCTGGGGCCCATGAGAGCAGAGTGATTCACTCAGGCTTCCTCTGCTGAGTGGAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052700.6 |
||
| 3UTR GCA 72 bp | CCGAGAAGTGCTAGAGGAGTCACAGGTACAGAGGGATaGTGGGAGAGCTGGCCAGCATCTGCCTTGATATGT | + |
|
Preference number: 3 (lower is better) Translates to: PRSARGVTGTEG*WESWPASALIC Trigger: ACATATCAAGGCAGATGCTGGCCAGCTCTCCCAGCATCCCTCTGTACCTGTGACTCCTCTAGCACTTCTCGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052700.6 |
||
| 3UTR CCA 72 bp | GGGGACTGTGTCCTGTGCCAACAGTCTCAGGTTGTCTaGATGCTGAGGCAGAAGAATCACTTGGGCTCAGGA | + |
|
Preference number: 3 (lower is better) Translates to: GDCVLCQQSQVV*MLRQKNHLGSG Trigger: TCCTGAGCCCAAGTGATTCTTCTGCCTCAGCATCCAGACAACCTGAGACTGTTGGCACAGGACACAGTCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052700.6 |
||
| 3UTR-3UTR CAA 90 bp | AGAGGCCAAAAGACTGGTGTAGCCAGGTGGCTGAGCTATATAGGGATCAGGCTATACTCCTCTCCGCAGTaGCCTCTGATGGAGCTCAGG | + |
|
Preference number: 3 (lower is better) Translates to: RGQKTGVARWLSYIGIRLYSSPQ*PLMELR Trigger: CCTGAGCTCCATCAGAGGCAACTGCGGAGAGGAGTA...TAGCCTGATCCCTATATAGCTCAGCCACCTGGCTACACCAGTCTTTTGGCCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052700.6 |
||
| 3UTR TCA 72 bp | ATCCCAGACCTAGTGACCTTGGCTCACAGGCGGAAATaGCCCCTCAACAGACAGATGCATCGGGATAATGGC | + |
|
Preference number: 3 (lower is better) Translates to: IPDLVTLAHRRK*PLNRQMHRDNG Trigger: GCCATTATCCCGATGCATCTGTCTGTTGAGGGGTCATTTCCGCCTGTGAGCCAAGGTCACTAGGTCTGGGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052700.6 |
||
| 3UTR GCA 72 bp | GGCTTGAACACGCGCACATTCTCAAACACTGGCTCATaGGTCATCCTCATCCCAGACCTAGTGACCTTGGCT | + |
|
Preference number: 3 (lower is better) Translates to: GLNTRTFSNTGS*VILIPDLVTLA Trigger: AGCCAAGGTCACTAGGTCTGGGATGAGGATGACGCATGAGCCAGTGTTTGAGAATGTGCGCGTGTTCAAGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052700.6 |
||
| 3UTR CCA 72 bp | CGTTCAGTGCTGTCCCCTAGTGGATTCAGCGTGGTATaGCAGGGCCATGATGCTGCCTCTTTTCTTCAGACA | + |
|
Preference number: 3 (lower is better) Translates to: RSVLSPSGFSVV*QGHDAASFLQT Trigger: TGTCTGAAGAAAAGAGGCAGCATCATGGCCCTGCCATACCACGCTGAATCCACTAGGGGACAGCACTGAACG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052700.6 |
||
| 3UTR CCA 72 bp | CTGAACGTTCAGTGCTGTCCCCTAGTGGATTCAGCGTaGTATGGCAGGGCCATGATGCTGCCTCTTTTCTTC | + |
|
Preference number: 3 (lower is better) Translates to: LNVQCCPLVDSA*YGRAMMLPLFF Trigger: GAAGAAAAGAGGCAGCATCATGGCCCTGCCATACCACGCTGAATCCACTAGGGGACAGCACTGAACGTTCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052700.6 |
||
| 3UTR GCA 72 bp | AACAAACTTGATTCTGATACCTGGCCTCCCCGGAGATaGCCAAGTGTCTGTCTCCTTCATGGCCACTCTCCT | + |
|
Preference number: 3 (lower is better) Translates to: NKLDSDTWPPRR*PSVCLLHGHSP Trigger: AGGAGAGTGGCCATGAAGGAGACAGACACTTGGGCATCTCCGGGGAGGCCAGGTATCAGAATCAAGTTTGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052700.6 |
||
| 3UTR CCA 72 bp | TGTCTCCTGGGGGAGTTGGATATCAAGAGATCTAGTTaGAAGTGGGTTGGCTCCACTCAGCAGAGGAAGCCT | + |
|
Preference number: 3 (lower is better) Translates to: CLLGELDIKRSS*KWVGSTQQRKP Trigger: AGGCTTCCTCTGCTGAGTGGAGCCAACCCACTTCCAACTAGATCTCTTGATATCCAACTCCCCCAGGAGACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052700.6 |
||
| 3UTR GCA 72 bp | AGGTACAGAGGGATGCTGGGAGAGCTGGCCAGCATCTaGCTTGATATGTTAAATAGTCACCCCAGCCATTAC | + |
|
Preference number: 3 (lower is better) Translates to: RYRGMLGELASI*LDMLNSHPSHY Trigger: GTAATGGCTGGGGTGACTATTTAACATATCAAGGCAGATGCTGGCCAGCTCTCCCAGCATCCCTCTGTACCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052700.6 |
||
| 3UTR CCA 72 bp | TTGGGCACCTGGCTGAAATCAACAGTTTTAGTGAGATaGGGGGACTGTGTCCTGTGCCAACAGTCTCAGGTT | + |
|
Preference number: 3 (lower is better) Translates to: LGTWLKSTVLVR*GDCVLCQQSQV Trigger: AACCTGAGACTGTTGGCACAGGACACAGTCCCCCCATCTCACTAAAACTGTTGATTTCAGCCAGGTGCCCAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052700.6 |
||
| 3UTR CCA 72 bp | CCTGTCAAAGAGGATCCAGTCAAGAGGCCAAAAGACTaGTGTAGCCAGGTGGCTGAGCTATATAGGGATCAG | + |
|
Preference number: 3 (lower is better) Translates to: PVKEDPVKRPKD*CSQVAELYRDQ Trigger: CTGATCCCTATATAGCTCAGCCACCTGGCTACACCAGTCTTTTGGCCTCTTGACTGGATCCTCTTTGACAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052700.6 |
||
| 3UTR GCA 72 bp | TCAAATCTGAAAAGATGCTCCCTGGACAAGCAAACATaGTACAGAATGGCATGGGTGTTGGCTCCCCCTGCT | + |
|
Preference number: 3 (lower is better) Translates to: SNLKRCSLDKQT*YRMAWVLAPPA Trigger: AGCAGGGGGAGCCAACACCCATGCCATTCTGTAGCATGTTTGCTTGTCCAGGGAGCATCTTTTCAGATTTGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052700.6 |
||
| 3UTR CCA 72 bp | AAGTCAGTGGCTGCATTGAGCACTTGCCTAGGGCTCTaGACTCTATCTCCAATAACACACACACACACACAC | + |
|
Preference number: 3 (lower is better) Translates to: KSVAALSTCLGL*TLSPITHTHTH Trigger: GTGTGTGTGTGTGTGTGTTATTGGAGATAGAGTCCAGAGCCCTAGGCAAGTGCTCAATGCAGCCACTGACTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052700.6 |
||
| 3UTR-3UTR CAA 90 bp | AGCCATTACTACAGTCCTGCTCTCTACAGAATACCAAATAAGCAACACAGAACTGCCAGGCCTCCTGAGTaGTGGTGGATCTGCCCTCTT | + |
|
Preference number: 3 (lower is better) Translates to: SHYYSPALYRIPNKQHRTARPPE*WWICPL Trigger: AAGAGGGCAGATCCACCACAACTCAGGAGGCCTGGC...AGTTCTGTGTTGCTTATTTGGTATTCTGTAGAGAGCAGGACTGTAGTAATGGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052700.6 |
||
| 3UTR CCA 72 bp | AAGGTGGTCAGCACCATAGCTAATTCACACTGTATTTaGGGGAAGGCATCCCTTGTCTGGGAGTACTGCTTT | + |
|
Preference number: 3 (lower is better) Translates to: KVVSTIANSHCI*GKASLVWEYCF Trigger: AAAGCAGTACTCCCAGACAAGGGATGCCTTCCCCCAAATACAGTGTGAATTAGCTATGGTGCTGACCACCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052700.6 |
||
| 3UTR-3UTR CAA 90 bp | AGAGGCCAAAAGACTGGTGTAGCCAGGTGGCTGAGCTATATAGGGATCAGGCTAATGAGAAGAACAAACTaGATTCTGATACCTGGCCTC | + |
|
Preference number: 3 (lower is better) Translates to: RGQKTGVARWLSYIGIRLMRRTN*ILIPGL Trigger: GAGGCCAGGTATCAGAATCAAGTTTGTTCTTCTCAT...TAGCCTGATCCCTATATAGCTCAGCCACCTGGCTACACCAGTCTTTTGGCCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052700.6 |
||
| 3UTR-3UTR CAA 90 bp | AGCCATTACTACAGTCCTGCTCTCTACAGAATACCAAATAAGCAACACAGAACTAAGTCAGTGGCTGCATaGAGCACTTGCCTAGGGCTC | + |
|
Preference number: 3 (lower is better) Translates to: SHYYSPALYRIPNKQHRTKSVAA*STCLGL Trigger: GAGCCCTAGGCAAGTGCTCAATGCAGCCACTGACTT...AGTTCTGTGTTGCTTATTTGGTATTCTGTAGAGAGCAGGACTGTAGTAATGGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052700.6 |
||
| 3UTR GCA 72 bp | GAAGGAGTGTGTGGTGTCAGCTCAAATCTGAAAAGATaGTCCCTGGACAAGCAAACATGCTACAGAATGGCA | + |
|
Preference number: 3 (lower is better) Translates to: EGVCGVSSNLKR*SLDKQTCYRMA Trigger: TGCCATTCTGTAGCATGTTTGCTTGTCCAGGGAGCATCTTTTCAGATTTGAGCTGACACCACACACTCCTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052700.6 |
||
| 3UTR CCA 72 bp | TATTCTCATGAGAAGAACAAACTTGATTCTGATACCTaGCCTCCCCGGAGATGCCCAAGTGTCTGTCTCCTT | + |
|
Preference number: 3 (lower is better) Translates to: YSHEKNKLDSDT*PPRRCPSVCLL Trigger: AAGGAGACAGACACTTGGGCATCTCCGGGGAGGCCAGGTATCAGAATCAAGTTTGTTCTTCTCATGAGAATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052700.6 |
||
| 3UTR TCA 72 bp | GTTCTTATCTCAGGGAAACACTCCAAAACTGGGTCATaGTGGTGGTATTCCTCCAGATCAGAACTGAGCTTC | + |
|
Preference number: 3 (lower is better) Translates to: VLISGKHSKTGS*WWYSSRSELSF Trigger: GAAGCTCAGTTCTGATCTGGAGGAATACCACCATCATGACCCAGTTTTGGAGTGTTTCCCTGAGATAAGAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052700.6 |
||
| 3UTR TCA 72 bp | GTGGTGGTGAAGTACCTGGATAAAGATCAGGGCTGCTaGATAAAGAATAAAGTCAGTGGCTGCATTGAGCAC | + |
|
Preference number: 3 (lower is better) Translates to: VVVKYLDKDQGC*IKNKVSGCIEH Trigger: GTGCTCAATGCAGCCACTGACTTTATTCTTTATTCAGCAGCCCTGATCTTTATCCAGGTACTTCACCACCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052700.6 |
||
| 3UTR GCA 72 bp | GAACTGCTGAGCACCTACTACATGCTGATTGCAGAATaGCTACTATGTGTTGCTCTGTTTCCTAAGTGCTGT | + |
|
Preference number: 3 (lower is better) Translates to: ELLSTYYMLIAE*LLCVALFPKCC Trigger: ACAGCACTTAGGAAACAGAGCAACACATAGTAGGCATTCTGCAATCAGCATGTAGTAGGTGCTCAGCAGTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052700.6 |
||
| 3UTR TCA 72 bp | TGGCAGGGCCATGATGCTGCCTCTTTTCTTCAGACATaGAAATGTTCTTATCTCAGGGAAACACTCCAAAAC | + |
|
Preference number: 3 (lower is better) Translates to: WQGHDAASFLQT*KCSYLRETLQN Trigger: GTTTTGGAGTGTTTCCCTGAGATAAGAACATTTTCATGTCTGAAGAAAAGAGGCAGCATCATGGCCCTGCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052700.6 |
||
| 3UTR TCA 72 bp | TGGATAAATTTCCTGACGTTGTTAAAGGTGCTACTGTaGGCCAAGCAGTCTTTATTGCTTTGGGGCTTGCAT | + |
|
Preference number: 3 (lower is better) Translates to: WINFLTLLKVLL*AKQSLLLWGLH Trigger: ATGCAAGCCCCAAAGCAATAAAGACTGCTTGGCTCACAGTAGCACCTTTAACAACGTCAGGAAATTTATCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052700.6 |
||
| 3UTR GCA 72 bp | GCAGAATGCCTACTATGTGTTGCTCTGTTTCCTAAGTaGTGTGGATCTACTGCTCAAAAACCCTACATTCAA | + |
|
Preference number: 3 (lower is better) Translates to: AECLLCVALFPK*CGSTAQKPYIQ Trigger: TTGAATGTAGGGTTTTTGAGCAGTAGATCCACAGCACTTAGGAAACAGAGCAACACATAGTAGGCATTCTGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052700.6 |
||
| 3UTR GCA 72 bp | GGGGCCATGTCTATTACTTCTGGCTTTCATGGTGAATaGAAACATGAACTTAAAGAAGGAGGACATGACTAC | + |
|
Preference number: 3 (lower is better) Translates to: GAMSITSGFHGE*KHELKEGGHDY Trigger: GTAGTCATGTCCTCCTTCTTTAAGTTCATGTTTGCATTCACCATGAAAGCCAGAAGTAATAGACATGGCCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052700.6 |
||
| CDS-3UTR CCA 90 bp | GACAGAGGGAAGAGAGAGTCCAGGCTGACGGTGGCCAGCGGACTAAACTGGACAAGGGCCAGCCCCAGGTaGCAGAGGACAAGGGCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: DRGKRESRLTVASGLNWTRASPR*QRTRAH Trigger: ATGGGCCCTTGTCCTCTGCCACCTGGGGCTGGCCCT...TGTCCAGTTTAGTCCGCTGGCCACCGTCAGCCTGGACTCTCTCTTCCCTCTGTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052700.6 |
||
| 3UTR CAA 72 bp | TGGTTTCTGCGATGGCTTTGGGCCAGGCCTCCTGAGTaGTGGTGGATCTGCCCTCTTGGGAGCCTGGCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: WFLRWLWARPPE*WWICPLGSLAE Trigger: CTCTGCCAGGCTCCCAAGAGGGCAGATCCACCACAACTCAGGAGGCCTGGCCCAAAGCCATCGCAGAAACCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052700.6 |
||
| 3UTR CAA 72 bp | GGGCCAGGCCTCCTGAGTTGTGGTGGATCTGCCCTCTaGGGAGCCTGGCAGAGTCAGAGTCATCCAATTCCA | + |
|
Preference number: 4 (lower is better) Translates to: GPGLLSCGGSAL*GAWQSQSHPIP Trigger: TGGAATTGGATGACTCTGACTCTGCCAGGCTCCCAAGAGGGCAGATCCACCACAACTCAGGAGGCCTGGCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052700.6 |
||
| CDS-3UTR CCA 90 bp | GAGTTGTGGTGGATCTGCCCTCTTGGGAGCCTGGCAGAGTCAGAGTCATCCAATGGCCTCCGGATGGCTTaGTACCCGAAGGGGAAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: ELWWICPLGSLAESESSNGLRMA*YPKGKA Trigger: TGCCTTCCCCTTCGGGTACCAAGCCATCCGGAGGCC...ATTGGATGACTCTGACTCTGCCAGGCTCCCAAGAGGGCAGATCCACCACAACTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052700.6 |
||
| CDS-3UTR TCA 90 bp | AAGGCAGACGTACTGTCTCTTGTTGTCCAGCACTTGCCCTCCACTTTCTTCGTACCTTCAGGGGCAGAGTaGTGGCCAGTAGGAGATCAG | + |
|
Preference number: 4 (lower is better) Translates to: KADVLSLVVQHLPSTFFVPSGAE*WPVGDQ Trigger: CTGATCTCCTACTGGCCATCACTCTGCCCCTGAAGG...TACGAAGAAAGTGGAGGGCAAGTGCTGGACAACAAGAGACAGTACGTCTGCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052700.6 |
||
| CDS-3UTR CCA 90 bp | GGCTGTCCTAGAACTCACCAAGTAGACCAGGATGGCTTTGACCTCACAGAGGTCGTAGCCAGTGACCAGTaGGTTGAGTACCACACTCCA | + |
|
Preference number: 4 (lower is better) Translates to: GCPRTHQVDQDGFDLTEVVASDQ*VEYHTP Trigger: TGGAGTGTGGTACTCAACCCACTGGTCACTGGCTAC...GACCTCTGTGAGGTCAAAGCCATCCTGGTCTACTTGGTGAGTTCTAGGACAGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052700.6 |
||
| 3UTR CAA 72 bp | CTGCTGGGCACTGAGTCTGGCTCACAACCTGCCCATTaGGGCACCTGGCTGAAATCAACAGTTTTAGTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: LLGTESGSQPAH*GTWLKSTVLVR Trigger: TCTCACTAAAACTGTTGATTTCAGCCAGGTGCCCAAATGGGCAGGTTGTGAGCCAGACTCAGTGCCCAGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052700.6 |
||
| 3UTR CAA 72 bp | GGGAGTTGGATATCAAGAGATCTAGTTGGAAGTGGGTaGGCTCCACTCAGCAGAGGAAGCCTGAGTGAATCA | + |
|
Preference number: 4 (lower is better) Translates to: GSWISRDLVGSG*APLSRGSLSES Trigger: TGATTCACTCAGGCTTCCTCTGCTGAGTGGAGCCAACCCACTTCCAACTAGATCTCTTGATATCCAACTCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052700.6 |
||
| 3UTR CAA 72 bp | GTAGACCAGGATGGCTTTGACCTCACAGAGGTCCACTaGCCCAAAGGAATAATTTGTATGAACCAGTTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: VDQDGFDLTEVH*PKGIICMNQFR Trigger: CCTGAACTGGTTCATACAAATTATTCCTTTGGGCAAGTGGACCTCTGTGAGGTCAAAGCCATCCTGGTCTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052700.6 |
||
| 3UTR CAA 72 bp | ACTTGGGCTCAGGAGTTCAAGACCACACCTAAACTCTaGTCTGCTAGAACAAATGTGTATGGTGCACATGTG | + |
|
Preference number: 4 (lower is better) Translates to: TWAQEFKTTPKL*SARTNVYGAHV Trigger: CACATGTGCACCATACACATTTGTTCTAGCAGACAAGAGTTTAGGTGTGGTCTTGAACTCCTGAGCCCAAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052700.6 |
||
| 3UTR CAA 72 bp | ATCATTAAAGGCTTTATTCTCATGAGAAGAACAAACTaGATTCTGATACCTGGCCTCCCCGGAGATGCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: IIKGFILMRRTN*ILIPGLPGDAQ Trigger: TTGGGCATCTCCGGGGAGGCCAGGTATCAGAATCAAGTTTGTTCTTCTCATGAGAATAAAGCCTTTAATGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052700.6 |
||
| CDS CCA 90 bp | TCCAGCCAGCTTCCGGAAGTCTCCAAGCCAAGGGCCAGCCCCAGGTaGCAGAGGACAAGGGCCCATATAGCCACACACACACCCCAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: SSQLPEVSKPRASPR*QRTRAHIATHTPQE Trigger: TTCCTGGGGTGTGTGTGTGGCTATATGGGCCCTTGTCCTCTGCCACCTGGGGCTGGCCCTTGGCTTGGAGACTTCCGGAAGCTGGCTGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052700.6 |
||
| CDS TCA 90 bp | GATCCCAGGCTTCCAGGCAGACCGGGGAGCCATTCACGGGTATGTTaGTGCCCAGGGAACTGGTACTGTTGTCCAGCCAGCTTCCGGAAG | + |
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Preference number: 5 (lower is better) Translates to: DPRLPGRPGSHSRVC*CPGNWYCCPASFRK Trigger: CTTCCGGAAGCTGGCTGGACAACAGTACCAGTTCCCTGGGCATCAACATACCCGTGAATGGCTCCCCGGTCTGCCTGGAAGCCTGGGATC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052700.6 |
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| CDS-3UTR CAA 90 bp | GGCTGTCCTAGAACTCACCAAGTAGACCAGGATGGCTTTGACCTCACAGAGGTCGGGCCTCCGGATGGCTaGGTACCCGAAGGGGAAGGC | + |
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Preference number: 5 (lower is better) Translates to: GCPRTHQVDQDGFDLTEVGPPDG*VPEGEG Trigger: GCCTTCCCCTTCGGGTACCAAGCCATCCGGAGGCCC...GACCTCTGTGAGGTCAAAGCCATCCTGGTCTACTTGGTGAGTTCTAGGACAGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052700.6 |
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| CDS-3UTR CAA 90 bp | GAGTTGTGGTGGATCTGCCCTCTTGGGAGCCTGGCAGAGTCAGAGTCATCCAATGCCCTGAGCTTCCGTTaGTGGCTCAGGCCTGAGCGC | + |
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Preference number: 5 (lower is better) Translates to: ELWWICPLGSLAESESSNALSFR*WLRPER Trigger: GCGCTCAGGCCTGAGCCACAAACGGAAGCTCAGGGC...ATTGGATGACTCTGACTCTGCCAGGCTCCCAAGAGGGCAGATCCACCACAACTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052700.6 |
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| CDS-3UTR CAA 90 bp | GAGTTGTGGTGGATCTGCCCTCTTGGGAGCCTGGCAGAGTCAGAGTCATCCAATAGGGAACTGGTACTGTaGTCCAGCCAGCTTCCGGAA | + |
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Preference number: 5 (lower is better) Translates to: ELWWICPLGSLAESESSNRELVL*SSQLPE Trigger: TTCCGGAAGCTGGCTGGACAACAGTACCAGTTCCCT...ATTGGATGACTCTGACTCTGCCAGGCTCCCAAGAGGGCAGATCCACCACAACTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052700.6 |
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| CDS CAA 72 bp | GCGCCTCCGGCCACCCAAGCTGCCCTGAGCTTCCGTTaGTGGCTCAGGCCTGAGCGCACCAGGGCCCGGAGG | + |
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Preference number: 6 (lower is better) Translates to: APPATQAALSFR*WLRPERTRARR Trigger: CCTCCGGGCCCTGGTGCGCTCAGGCCTGAGCCACAAACGGAAGCTCAGGGCAGCTTGGGTGGCCGGAGGCGC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052700.6 |
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| CDS CCA 72 bp | CCTCCGGCCACCCAAGCTGCCCTGAGCTTCCGTTTGTaGCTCAGGCCTGAGCGCACCAGGGCCCGGAGGCAG | + |
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Preference number: 6 (lower is better) Translates to: PPATQAALSFRL*LRPERTRARRQ Trigger: CTGCCTCCGGGCCCTGGTGCGCTCAGGCCTGAGCCACAAACGGAAGCTCAGGGCAGCTTGGGTGGCCGGAGG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052700.6 |
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| CDS CAA 90 bp | GTGAGGAGAGCGCCTCCGGCCACCCAAGCTGCCCTGAGCTTCCGTTaGTGGCTCAGGCCTGAGCGCACCAGGGCCCGGAGGCAGCCCACA | + |
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Preference number: 6 (lower is better) Translates to: VRRAPPATQAALSFR*WLRPERTRARRQPT Trigger: TGTGGGCTGCCTCCGGGCCCTGGTGCGCTCAGGCCTGAGCCACAAACGGAAGCTCAGGGCAGCTTGGGTGGCCGGAGGCGCTCTCCTCAC 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052700.6 |
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| CDS CAA 90 bp | GGGGAGCCATTCACGGGTATGTTGATGCCCAGGGAACTGGTACTGTaGTCCAGCCAGCTTCCGGAAGTCTCCAAGCCAAGGGCCAGCCCC | + |
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Preference number: 6 (lower is better) Translates to: GEPFTGMLMPRELVL*SSQLPEVSKPRASP Trigger: GGGGCTGGCCCTTGGCTTGGAGACTTCCGGAAGCTGGCTGGACAACAGTACCAGTTCCCTGGGCATCAACATACCCGTGAATGGCTCCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052700.6 |
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| CDS CCA 72 bp | CTTCCGGAAGTCTCCAAGCCAAGGGCCAGCCCCAGGTaGCAGAGGACAAGGGCCCATATAGCCACACACACA | + |
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Preference number: 6 (lower is better) Translates to: LPEVSKPRASPR*QRTRAHIATHT Trigger: TGTGTGTGTGGCTATATGGGCCCTTGTCCTCTGCCACCTGGGGCTGGCCCTTGGCTTGGAGACTTCCGGAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052700.6 |
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| CDS CAA 90 bp | GGATCCCAGGCTTCCAGGCAGACCGGGGAGCCATTCACGGGTATGTaGATGCCCAGGGAACTGGTACTGTTGTCCAGCCAGCTTCCGGAA | + |
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Preference number: 6 (lower is better) Translates to: GSQASRQTGEPFTGM*MPRELVLLSSQLPE Trigger: TTCCGGAAGCTGGCTGGACAACAGTACCAGTTCCCTGGGCATCAACATACCCGTGAATGGCTCCCCGGTCTGCCTGGAAGCCTGGGATCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052700.6 |
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| CDS TCA 72 bp | CTTCCAGGCAGACCGGGGAGCCATTCACGGGTATGTTaGTGCCCAGGGAACTGGTACTGTTGTCCAGCCAGC | + |
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Preference number: 6 (lower is better) Translates to: LPGRPGSHSRVC*CPGNWYCCPAS Trigger: GCTGGCTGGACAACAGTACCAGTTCCCTGGGCATCAACATACCCGTGAATGGCTCCCCGGTCTGCCTGGAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052700.6 |
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| CDS CAA 72 bp | GCTTCCAGGCAGACCGGGGAGCCATTCACGGGTATGTaGATGCCCAGGGAACTGGTACTGTTGTCCAGCCAG | + |
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Preference number: 6 (lower is better) Translates to: ASRQTGEPFTGM*MPRELVLLSSQ Trigger: CTGGCTGGACAACAGTACCAGTTCCCTGGGCATCAACATACCCGTGAATGGCTCCCCGGTCTGCCTGGAAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052700.6 |
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| CDS CAA 72 bp | TTCACGGGTATGTTGATGCCCAGGGAACTGGTACTGTaGTCCAGCCAGCTTCCGGAAGTCTCCAAGCCAAGG | + |
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Preference number: 6 (lower is better) Translates to: FTGMLMPRELVL*SSQLPEVSKPR Trigger: CCTTGGCTTGGAGACTTCCGGAAGCTGGCTGGACAACAGTACCAGTTCCCTGGGCATCAACATACCCGTGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052700.6 |
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