Pregenerated sensors for FEZ1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032118Ensembl transcript IDs: ENSMUST00000034630.15, ENSMUST00000160041.2, ENSMUST00000161500.8, ENSMUST00000161978.2, ENSMUST00000162235.2, ENSMUST00000162633.9, ENSMUST00000163816.8, ENSMUST00000214772.2
Found 97 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GAGAGGGAGCAGAATCTCTGGCCCTGCGCCCGATCATGCATCCAATaGTTACTAGCACTAGAAGCCAACAGCAAAGGATCCCGCGCGCAG | + |
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Preference number: 1 (lower is better) Translates to: EREQNLWPCARSCIQ*LLALEANSKGSRAQ Trigger: CTGCGCGCGGGATCCTTTGCTGTTGGCTTCTAGTGCTAGTAATCATTGGATGCATGATCGGGCGCAGGGCCAGAGATTCTGCTCCCTCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034630.15 ENSMUST00000161978.2 |
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| 3UTR TCA 90 bp | TACACGCCGGAGGTTACGTGGTGTCATGCAATCCCAGCGATGGAATaGCTTTCTTGCTCAGTGACCTCCTGTAGTGAGGCTGCTCCAAAG | + |
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Preference number: 1 (lower is better) Translates to: YTPEVTWCHAIPAME*LSCSVTSCSEAAPK Trigger: CTTTGGAGCAGCCTCACTACAGGAGGTCACTGAGCAAGAAAGTCATTCCATCGCTGGGATTGCATGACACCACGTAACCTCCGGCGTGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034630.15 ENSMUST00000161978.2 |
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| 3UTR GCA 90 bp | TCCTCTTCTAGCACCTCCTCTTCCTCTTCAGGATCTGGAGAGTTCTaGATCATTTCTTCAATTTCCTCAATCACCTGGTCAGCTGTGAGG | + |
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Preference number: 1 (lower is better) Translates to: SSSSTSSSSSGSGEF*IISSISSITWSAVR Trigger: CCTCACAGCTGACCAGGTGATTGAGGAAATTGAAGAAATGATGCAGAACTCTCCAGATCCTGAAGAGGAAGAGGAGGTGCTAGAAGAGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160041.2 |
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| 3UTR GCA 90 bp | GTAGTCTCCACCGCCCATGGATCTAACTCTGTGGCTTTAAGAAAATaGCTTTCCTTTCCATTCTTGTTCTTCACCCACATACTAGGATAT | + |
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Preference number: 1 (lower is better) Translates to: VVSTAHGSNSVALRK*LSFPFLFFTHILGY Trigger: ATATCCTAGTATGTGGGTGAAGAACAAGAATGGAAAGGAAAGGCATTTTCTTAAAGCCACAGAGTTAGATCCATGGGCGGTGGAGACTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161978.2 |
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| 3UTR GCA 90 bp | AGTGTGCTGTCATCAATGGCCAGTTACAGACTAAAAGAAGACACATaGAGACAGTGTAGTGTTCTTCACAGGGTCCTACAAATACTCATT | + |
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Preference number: 1 (lower is better) Translates to: SVLSSMASYRLKEDT*RQCSVLHRVLQILI Trigger: AATGAGTATTTGTAGGACCCTGTGAAGAACACTACACTGTCTGCATGTGTCTTCTTTTAGTCTGTAACTGGCCATTGATGACAGCACACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161978.2 |
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| 3UTR-3UTR GCA 90 bp | GAGGGCACCTGCCTTCCCCAACACAGGTGGAGAGGGAGCAGAATCTCTGGCCCTGATCCCGCGCGCAGTTaGTCTTGTTTAATCCAGGTT | + |
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Preference number: 2 (lower is better) Translates to: EGTCLPQHRWRGSRISGPDPARS*SCLIQV Trigger: AACCTGGATTAAACAAGAGCAACTGCGCGCGGGATC...AGGGCCAGAGATTCTGCTCCCTCTCCACCTGTGTTGGGGAAGGCAGGTGCCCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034630.15 ENSMUST00000161978.2 |
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| 3UTR-3UTR GCA 90 bp | GCAGAATCTCTGGCCCTGCGCCCGATCATGCATCCAATGATTACTAGCACTAGAGGACCAGGCAATGACTaGAGCCCTGAGTCATCCCTC | + |
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Preference number: 2 (lower is better) Translates to: AESLALRPIMHPMITSTRGPGND*SPESSL Trigger: GAGGGATGACTCAGGGCTGCAGTCATTGCCTGGTCC...TCTAGTGCTAGTAATCATTGGATGCATGATCGGGCGCAGGGCCAGAGATTCTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161978.2 |
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| 3UTR-3UTR TCA 90 bp | AAAGCACTGAAACGAGAAGAGGCGAGAGGTCATGCAGGGATCACACTGAGCAGACCAGCACTTGGAAGGTaGAGGCAGGAAGACCAGAAT | + |
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Preference number: 2 (lower is better) Translates to: KALKREEARGHAGITLSRPALGR*RQEDQN Trigger: ATTCTGGTCTTCCTGCCTTCACCTTCCAAGTGCTGG...TCTGCTCAGTGTGATCCCTGCATGACCTCTCGCCTCTTCTCGTTTCAGTGCTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161978.2 |
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| 3UTR-3UTR TCA 90 bp | TACCCTGAGGACCAGGCAATGACTGCAGCCCTGAGTCATCCCTCTGAGGACAGACTGCTCGTAGGTTGCTaGGAGACTTGTAAAATATGC | + |
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Preference number: 2 (lower is better) Translates to: YPEDQAMTAALSHPSEDRLLVGC*ETCKIC Trigger: GCATATTTTACAAGTCTCTCAGCAACCTACGAGCAG...TCTGTCCTCAGAGGGATGACTCAGGGCTGCAGTCATTGCCTGGTCCTCAGGGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161978.2 |
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| 3UTR-3UTR TCA 90 bp | TATACACGTTTAAATACACGCCGGAGGTTACGTGGTGTCATGCAATCCCAGCGAAGCAGAGAGCTACCCTaGGGACCAGGCAATGACTGC | + |
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Preference number: 2 (lower is better) Translates to: YTRLNTRRRLRGVMQSQRSRELP*GPGNDC Trigger: GCAGTCATTGCCTGGTCCTCAGGGTAGCTCTCTGCT...TCGCTGGGATTGCATGACACCACGTAACCTCCGGCGTGTATTTAAACGTGTATA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161978.2 |
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| 3UTR-3UTR GCA 90 bp | GAATCTCTGGCCCTGCGCCCGATCATGCATCCAATGATTACTAGCACTAGAAGCGATCCCGCGCGCAGTTaGTCTTGTTTAATCCAGGTT | + |
|
Preference number: 2 (lower is better) Translates to: ESLALRPIMHPMITSTRSDPARS*SCLIQV Trigger: AACCTGGATTAAACAAGAGCAACTGCGCGCGGGATC...GCTTCTAGTGCTAGTAATCATTGGATGCATGATCGGGCGCAGGGCCAGAGATTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034630.15 ENSMUST00000161978.2 |
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| 3UTR-3UTR TCA 90 bp | CTGCGCCCGATCATGCATCCAATGATTACTAGCACTAGAAGCCAACAGCAAAGGATCCCAGCGATGGAATaGCTTTCTTGCTCAGTGACC | + |
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Preference number: 2 (lower is better) Translates to: LRPIMHPMITSTRSQQQRIPAME*LSCSVT Trigger: GGTCACTGAGCAAGAAAGTCATTCCATCGCTGGGAT...CCTTTGCTGTTGGCTTCTAGTGCTAGTAATCATTGGATGCATGATCGGGCGCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034630.15 ENSMUST00000161978.2 |
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| 3UTR-3UTR TCA 90 bp | ATGATTACTAGCACTAGAAGCCAACAGCAAAGGATCCCGCGCGCAGTTGCTCTTATCCCAGCGATGGAATaGCTTTCTTGCTCAGTGACC | + |
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Preference number: 2 (lower is better) Translates to: MITSTRSQQQRIPRAVALIPAME*LSCSVT Trigger: GGTCACTGAGCAAGAAAGTCATTCCATCGCTGGGAT...AAGAGCAACTGCGCGCGGGATCCTTTGCTGTTGGCTTCTAGTGCTAGTAATCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034630.15 ENSMUST00000161978.2 |
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| 3UTR-3UTR CCA 90 bp | TATACACGTTTAAATACACGCCGGAGGTTACGTGGTGTCATGCAATCCCAGCGAGCTGATCCCAGCACTTaGAAGGTGAAGGCAGGAAGA | + |
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Preference number: 2 (lower is better) Translates to: YTRLNTRRRLRGVMQSQRADPST*KVKAGR Trigger: TCTTCCTGCCTTCACCTTCCAAGTGCTGGGATCAGC...TCGCTGGGATTGCATGACACCACGTAACCTCCGGCGTGTATTTAAACGTGTATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161978.2 |
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| 3UTR-3UTR CCA 90 bp | CAGGTTAAGCTATACACGTTTAAATACACGCCGGAGGTTACGTGGTGTCATGCACTTCCCCAACACAGGTaGAGAGGGAGCAGAATCTCT | + |
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Preference number: 2 (lower is better) Translates to: QVKLYTFKYTPEVTWCHALPQHR*RGSRIS Trigger: AGAGATTCTGCTCCCTCTCCACCTGTGTTGGGGAAG...TGCATGACACCACGTAACCTCCGGCGTGTATTTAAACGTGTATAGCTTAACCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034630.15 ENSMUST00000161978.2 |
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| 3UTR-3UTR CCA 90 bp | CATCCAATGATTACTAGCACTAGAAGCCAACAGCAAAGGATCCCGCGCGCAGTTATGCAATCCCAGCGATaGAATGACTTTCTTGCTCAG | + |
|
Preference number: 2 (lower is better) Translates to: HPMITSTRSQQQRIPRAVMQSQR*NDFLAQ Trigger: CTGAGCAAGAAAGTCATTCCATCGCTGGGATTGCAT...AACTGCGCGCGGGATCCTTTGCTGTTGGCTTCTAGTGCTAGTAATCATTGGATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034630.15 ENSMUST00000161978.2 |
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| 3UTR-3UTR TCA 90 bp | AGTTGCTCTTGTTTAATCCAGGTTAAGCTATACACGTTTAAATACACGCCGGAGATGCAGGGATCACACTaGGCAGAGAGCTACCCTGAG | + |
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Preference number: 2 (lower is better) Translates to: SCSCLIQVKLYTFKYTPEMQGSH*AESYPE Trigger: CTCAGGGTAGCTCTCTGCTCAGTGTGATCCCTGCAT...CTCCGGCGTGTATTTAAACGTGTATAGCTTAACCTGGATTAAACAAGAGCAACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161978.2 |
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| 3UTR CAA 90 bp | CATGAATCTCAATGTCAGAGCTGTTGCCATTCAGAGCTTCAATGTTaGGGTCCCTCCAGTCTTCTGAGAGTGAAGGGATGTAATTGTCTG | + |
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Preference number: 2 (lower is better) Translates to: HESQCQSCCHSELQC*GPSSLLRVKGCNCL Trigger: CAGACAATTACATCCCTTCACTCTCAGAAGACTGGAGGGACCCAAACATTGAAGCTCTGAATGGCAACAGCTCTGACATTGAGATTCATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160041.2 |
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| 3UTR-3UTR GCA 90 bp | AGTTGCTCTTGTTTAATCCAGGTTAAGCTATACACGTTTAAATACACGCCGGAGCTAAAAGAAGACACATaGAGACAGTGTAGTGTTCTT | + |
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Preference number: 2 (lower is better) Translates to: SCSCLIQVKLYTFKYTPELKEDT*RQCSVL Trigger: AAGAACACTACACTGTCTGCATGTGTCTTCTTTTAG...CTCCGGCGTGTATTTAAACGTGTATAGCTTAACCTGGATTAAACAAGAGCAACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161978.2 |
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| 3UTR TCA 72 bp | GGGTTGAGGGCTGGAGCCAGACTACATAATGAGTGGTaGGGGCACCTGCCTTCCCCAACACAGGTGGAGAGG | + |
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Preference number: 3 (lower is better) Translates to: GLRAGARLHNEW*GHLPSPTQVER Trigger: CCTCTCCACCTGTGTTGGGGAAGGCAGGTGCCCTCACCACTCATTATGTAGTCTGGCTCCAGCCCTCAACCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034630.15 ENSMUST00000161978.2 |
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| 3UTR TCA 72 bp | GGTCATGCAGGGATCACACTGAGCAGAGAGCTACCCTaGGGACCAGGCAATGACTGCAGCCCTGAGTCATCC | + |
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Preference number: 3 (lower is better) Translates to: GHAGITLSRELP*GPGNDCSPESS Trigger: GGATGACTCAGGGCTGCAGTCATTGCCTGGTCCTCAGGGTAGCTCTCTGCTCAGTGTGATCCCTGCATGACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161978.2 |
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| 3UTR GCA 72 bp | CTGGAGCCAGACTACATAATGAGTGGTGAGGGCACCTaGCTTCCCCAACACAGGTGGAGAGGGAGCAGAATC | + |
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Preference number: 3 (lower is better) Translates to: LEPDYIMSGEGT*LPQHRWRGSRI Trigger: GATTCTGCTCCCTCTCCACCTGTGTTGGGGAAGGCAGGTGCCCTCACCACTCATTATGTAGTCTGGCTCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034630.15 ENSMUST00000161978.2 |
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| 3UTR TCA 72 bp | AGGCTGGGCATCGTGCTGATCCCAGCACTTGGAAGGTaGAGGCAGGAAGACCAGAATGTCAAGGTCTTCCTC | + |
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Preference number: 3 (lower is better) Translates to: RLGIVLIPALGR*RQEDQNVKVFL Trigger: GAGGAAGACCTTGACATTCTGGTCTTCCTGCCTTCACCTTCCAAGTGCTGGGATCAGCACGATGCCCAGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161978.2 |
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| 3UTR TCA 72 bp | AACGAGAAGAGGCGAGAGGTCATGCAGGGATCACACTaGGCAGAGAGCTACCCTGAGGACCAGGCAATGACT | + |
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Preference number: 3 (lower is better) Translates to: NEKRREVMQGSH*AESYPEDQAMT Trigger: AGTCATTGCCTGGTCCTCAGGGTAGCTCTCTGCTCAGTGTGATCCCTGCATGACCTCTCGCCTCTTCTCGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161978.2 |
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| 3UTR GCA 72 bp | GGACAAAGCACTGAAACGAGAAGAGGCGAGAGGTCATaGAGGGATCACACTGAGCAGAGAGCTACCCTGAGG | + |
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Preference number: 3 (lower is better) Translates to: GQSTETRRGERS*RDHTEQRATLR Trigger: CCTCAGGGTAGCTCTCTGCTCAGTGTGATCCCTGCATGACCTCTCGCCTCTTCTCGTTTCAGTGCTTTGTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161978.2 |
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| 3UTR-3UTR CAA 90 bp | GAATCTCTGGCCCTGCGCCCGATCATGCATCCAATGATTACTAGCACTAGAAGCGGATCCCGCGCGCAGTaGCTCTTGTTTAATCCAGGT | + |
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Preference number: 3 (lower is better) Translates to: ESLALRPIMHPMITSTRSGSRAQ*LLFNPG Trigger: ACCTGGATTAAACAAGAGCAACTGCGCGCGGGATCC...GCTTCTAGTGCTAGTAATCATTGGATGCATGATCGGGCGCAGGGCCAGAGATTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034630.15 ENSMUST00000161978.2 |
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| 3UTR TCA 72 bp | GGACCAGGCAATGACTGCAGCCCTGAGTCATCCCTCTaGGGACAGAAGAGAATGACAGGTGTCCGTTACAAT | + |
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Preference number: 3 (lower is better) Translates to: GPGNDCSPESSL*GQKRMTGVRYN Trigger: ATTGTAACGGACACCTGTCATTCTCTTCTGTCCTCAGAGGGATGACTCAGGGCTGCAGTCATTGCCTGGTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161978.2 |
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| 3UTR TCA 72 bp | CAGAATCTCTGGCCCTGCGCCCGATCATGCATCCAATaGTTACTAGCACTAGAAGCCAACAGCAAAGGATCC | + |
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Preference number: 3 (lower is better) Translates to: QNLWPCARSCIQ*LLALEANSKGS Trigger: GGATCCTTTGCTGTTGGCTTCTAGTGCTAGTAATCATTGGATGCATGATCGGGCGCAGGGCCAGAGATTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034630.15 ENSMUST00000161978.2 |
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| 3UTR TCA 72 bp | GCTGCTCCAAAGATGAGGTTAGGTTGGACAAAGCACTaGAACGAGAAGAGGCGAGAGGTCATGCAGGGATCA | + |
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Preference number: 3 (lower is better) Translates to: AAPKMRLGWTKH*NEKRREVMQGS Trigger: TGATCCCTGCATGACCTCTCGCCTCTTCTCGTTTCAGTGCTTTGTCCAACCTAACCTCATCTTTGGAGCAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161978.2 |
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| 3UTR-3UTR CAA 90 bp | ATTTCCTCAATCACCTGGTCAGCTGTGAGGAGAGGCTCCTCATTGATGCCAGAGTCAATGTCAGAGCTGTaGCCATTCAGAGCTTCAATG | + |
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Preference number: 3 (lower is better) Translates to: ISSITWSAVRRGSSLMPESMSEL*PFRASM Trigger: CATTGAAGCTCTGAATGGCAACAGCTCTGACATTGA...CTCTGGCATCAATGAGGAGCCTCTCCTCACAGCTGACCAGGTGATTGAGGAAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160041.2 |
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| 3UTR TCA 72 bp | ACATGTGTCTCAGCCCTTCATAGGACCAGTTGTTGTTaGAGGTCTGTGTCAAGGCCTGCATCTCTTGTAGCA | + |
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Preference number: 3 (lower is better) Translates to: TCVSALHRTSCC*RSVSRPASLVA Trigger: TGCTACAAGAGATGCAGGCCTTGACACAGACCTTCAACAACAACTGGTCCTATGAAGGGCTGAGACACATGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160041.2 |
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| 3UTR TCA 72 bp | TTGTTGTTAATGTACATTATAGGCTGGGCATCGTGCTaGTCCCAGCACTTGGAAGGTGAAGGCAGGAAGACC | + |
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Preference number: 3 (lower is better) Translates to: LLLMYIIGWASC*SQHLEGEGRKT Trigger: GGTCTTCCTGCCTTCACCTTCCAAGTGCTGGGATCAGCACGATGCCCAGCCTATAATGTACATTAACAACAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161978.2 |
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| 3UTR GCA 72 bp | CTTCTTCCTTCTCATGAATCTCAATGTCAGAGCTGTTaGCATTCAGAGCTTCAATGTTTGGGTCCCTCCAGT | + |
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Preference number: 3 (lower is better) Translates to: LLPSHESQCQSC*HSELQCLGPSS Trigger: ACTGGAGGGACCCAAACATTGAAGCTCTGAATGGCAACAGCTCTGACATTGAGATTCATGAGAAGGAAGAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160041.2 |
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| 3UTR GCA 72 bp | TCATCAATGGCCAGTTACAGACTAAAAGAAGACACATaGAGACAGTGTAGTGTTCTTCACAGGGTCCTACAA | + |
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Preference number: 3 (lower is better) Translates to: SSMASYRLKEDT*RQCSVLHRVLQ Trigger: TTGTAGGACCCTGTGAAGAACACTACACTGTCTGCATGTGTCTTCTTTTAGTCTGTAACTGGCCATTGATGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161978.2 |
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| 3UTR CCA 72 bp | ATTAATCCCCCTGATCCCCATAGAAAGAGTACAGTTTaGGATTTCATAACCAGGTTCCATAAACCTCCTGCA | + |
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Preference number: 3 (lower is better) Translates to: INPPDPHRKSTV*DFITRFHKPPA Trigger: TGCAGGAGGTTTATGGAACCTGGTTATGAAATCCCAAACTGTACTCTTTCTATGGGGATCAGGGGGATTAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000161978.2 |
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| 3UTR-3UTR CAA 90 bp | CTATTGAAATTTAACATTAATCCCCCTGATCCCCATAGAAAGAGTACAGTTTGGCTGTTGCTGTTGTTGTaGTTAATGTACATTATAGGC | + |
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Preference number: 3 (lower is better) Translates to: LLKFNINPPDPHRKSTVWLLLLL*LMYIIG Trigger: GCCTATAATGTACATTAACAACAACAACAGCAACAG...CCAAACTGTACTCTTTCTATGGGGATCAGGGGGATTAATGTTAAATTTCAATAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000161978.2 |
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| CDS-3UTR GCA 90 bp | AGTGGTGAGGGCACCTGCCTTCCCCAACACAGGTGGAGAGGGAGCAGAATCTCTTCCTCCTCCTGGATCTaGAGCTGGTTCTTCACTGGA | + |
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Preference number: 4 (lower is better) Translates to: SGEGTCLPQHRWRGSRISSSSWI*SWFFTG Trigger: TCCAGTGAAGAACCAGCTGCAGATCCAGGAGGAGGA...AGAGATTCTGCTCCCTCTCCACCTGTGTTGGGGAAGGCAGGTGCCCTCACCACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034630.15 |
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| CDS-3UTR TCA 90 bp | ACACGTTTAAATACACGCCGGAGGTTACGTGGTGTCATGCAATCCCAGCGATGGGTGGACCAGCTCCTCTaGGAAGTCACGGATGGCACC | + |
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Preference number: 4 (lower is better) Translates to: TRLNTRRRLRGVMQSQRWVDQLL*EVTDGT Trigger: GGTGCCATCCGTGACTTCTCAGAGGAGCTGGTCCAC...CCATCGCTGGGATTGCATGACACCACGTAACCTCCGGCGTGTATTTAAACGTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034630.15 |
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| CDS-3UTR GCA 90 bp | GCAGAATCTCTGGCCCTGCGCCCGATCATGCATCCAATGATTACTAGCACTAGAACTCCAGCTCATCTCTaGGGGCCAGCTGGTGGACCA | + |
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Preference number: 4 (lower is better) Translates to: AESLALRPIMHPMITSTRTPAHL*GPAGGP Trigger: TGGTCCACCAGCTGGCCCGCAGAGATGAGCTGGAGT...TCTAGTGCTAGTAATCATTGGATGCATGATCGGGCGCAGGGCCAGAGATTCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034630.15 |
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| CDS-3UTR TCA 90 bp | GAGGGCACCTGCCTTCCCCAACACAGGTGGAGAGGGAGCAGAATCTCTGGCCCTTCCGAAAGCAGACATTaGGCTTCTCATCAAATTCAT | + |
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Preference number: 4 (lower is better) Translates to: EGTCLPQHRWRGSRISGPSESRH*ASHQIH Trigger: ATGAATTTGATGAGAAGCTCAATGTCTGCTTTCGGA...AGGGCCAGAGATTCTGCTCCCTCTCCACCTGTGTTGGGGAAGGCAGGTGCCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034630.15 |
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| CDS-3UTR CCA 90 bp | GCAGAATCTCTGGCCCTGCGCCCGATCATGCATCCAATGATTACTAGCACTAGACTGTGGCTTTTCCTCTaGCTCCTCAGTGCAACTGGG | + |
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Preference number: 4 (lower is better) Translates to: AESLALRPIMHPMITSTRLWLFL*LLSATG Trigger: CCCAGTTGCACTGAGGAGCCAGAGGAAAAGCCACAG...TCTAGTGCTAGTAATCATTGGATGCATGATCGGGCGCAGGGCCAGAGATTCTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034630.15 |
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| CDS-3UTR CCA 90 bp | ATTTCCTCAATCACCTGGTCAGCTGTGAGGAGAGGCTCCTCATTGATGCCAGAGTCCTGGATCTGCAGCTaGTTCTTCACTGGAGCCAGG | + |
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Preference number: 4 (lower is better) Translates to: ISSITWSAVRRGSSLMPESWICS*FFTGAR Trigger: CCTGGCTCCAGTGAAGAACCAGCTGCAGATCCAGGA...CTCTGGCATCAATGAGGAGCCTCTCCTCACAGCTGACCAGGTGATTGAGGAAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160041.2 |
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| CDS-3UTR CCA 90 bp | CTGCGCCCGATCATGCATCCAATGATTACTAGCACTAGAAGCCAACAGCAAAGGCTGAGAAGTCACGGATaGCACCCTCTACCCGGTCCA | + |
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Preference number: 4 (lower is better) Translates to: LRPIMHPMITSTRSQQQRLRSHG*HPLPGP Trigger: TGGACCGGGTAGAGGGTGCCATCCGTGACTTCTCAG...CCTTTGCTGTTGGCTTCTAGTGCTAGTAATCATTGGATGCATGATCGGGCGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034630.15 |
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| CDS-3UTR CCA 90 bp | CAGGTTAAGCTATACACGTTTAAATACACGCCGGAGGTTACGTGGTGTCATGCAGAGGAGCCAAAGGTCTaGCGGATGCCGCTCTGCAGG | + |
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Preference number: 4 (lower is better) Translates to: QVKLYTFKYTPEVTWCHAEEPKV*RMPLCR Trigger: CCTGCAGAGCGGCATCCGCCAGACCTTTGGCTCCTC...TGCATGACACCACGTAACCTCCGGCGTGTATTTAAACGTGTATAGCTTAACCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034630.15 |
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| CDS-3UTR TCA 90 bp | CAGGTTAAGCTATACACGTTTAAATACACGCCGGAGGTTACGTGGTGTCATGCACTGTCTGTCAGCTCCTaGGGAGCCAAAGGTCTGGCG | + |
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Preference number: 4 (lower is better) Translates to: QVKLYTFKYTPEVTWCHALSVSS*GAKGLA Trigger: CGCCAGACCTTTGGCTCCTCAGGAGCTGACAGACAG...TGCATGACACCACGTAACCTCCGGCGTGTATTTAAACGTGTATAGCTTAACCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034630.15 |
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| CDS-3UTR CCA 90 bp | CATCCAATGATTACTAGCACTAGAAGCCAACAGCAAAGGATCCCGCGCGCAGTTCAGCTGGTTCTTCACTaGAGCCAGGCTCTCCGTCTT | + |
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Preference number: 4 (lower is better) Translates to: HPMITSTRSQQQRIPRAVQLVLH*SQALRL Trigger: AAGACGGAGAGCCTGGCTCCAGTGAAGAACCAGCTG...AACTGCGCGCGGGATCCTTTGCTGTTGGCTTCTAGTGCTAGTAATCATTGGATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034630.15 |
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| CDS-3UTR CCA 90 bp | TTAAGCTATACACGTTTAAATACACGCCGGAGGTTACGTGGTGTCATGCAATCCTCTCTGCGGGCCAGCTaGTGGACCAGCTCCTCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: LSYTRLNTRRRLRGVMQSSLRAS*WTSSSE Trigger: CTCAGAGGAGCTGGTCCACCAGCTGGCCCGCAGAGA...GGATTGCATGACACCACGTAACCTCCGGCGTGTATTTAAACGTGTATAGCTTAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034630.15 |
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| CDS-3UTR TCA 90 bp | GAATCTCTGGCCCTGCGCCCGATCATGCATCCAATGATTACTAGCACTAGAAGCAGGACCAGTTGTTGTTaGAGGTCTGTGTCAAGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: ESLALRPIMHPMITSTRSRTSCC*RSVSRP Trigger: AGGCCTTGACACAGACCTTCAACAACAACTGGTCCT...GCTTCTAGTGCTAGTAATCATTGGATGCATGATCGGGCGCAGGGCCAGAGATTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034630.15 |
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| CDS-3UTR TCA 90 bp | GCAAAGGATCCCGCGCGCAGTTGCTCTTGTTTAATCCAGGTTAAGCTATACACGTCCCTCTGCTTGTTCTaGACCTCAATGAGCACCGTG | + |
|
Preference number: 4 (lower is better) Translates to: AKDPARSCSCLIQVKLYTSLCLF*TSMSTV Trigger: CACGGTGCTCATTGAGGTTCAGAACAAGCAGAGGGA...CGTGTATAGCTTAACCTGGATTAAACAAGAGCAACTGCGCGCGGGATCCTTTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034630.15 |
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| CDS-3UTR TCA 90 bp | ACAGCAAAGGATCCCGCGCGCAGTTGCTCTTGTTTAATCCAGGTTAAGCTATACCGCTTGAGAGGCATCTaGCTTCCCTTCTCTATCCGG | + |
|
Preference number: 4 (lower is better) Translates to: TAKDPARSCSCLIQVKLYRLRGI*LPFSIR Trigger: CCGGATAGAGAAGGGAAGTCAGATGCCTCTCAAGCG...GTATAGCTTAACCTGGATTAAACAAGAGCAACTGCGCGCGGGATCCTTTGCTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034630.15 |
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| CDS-3UTR GCA 90 bp | CTGCGCCCGATCATGCATCCAATGATTACTAGCACTAGAAGCCAACAGCAAAGGCCTTCTCTATCCGGTTaGTCTGCAGGCTTAACCCCT | + |
|
Preference number: 4 (lower is better) Translates to: LRPIMHPMITSTRSQQQRPSLSG*SAGLTP Trigger: AGGGGTTAAGCCTGCAGAGCAACCGGATAGAGAAGG...CCTTTGCTGTTGGCTTCTAGTGCTAGTAATCATTGGATGCATGATCGGGCGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034630.15 |
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| CDS-3UTR GCA 90 bp | CAGGTTAAGCTATACACGTTTAAATACACGCCGGAGGTTACGTGGTGTCATGCACAAAGGTCTGGCGGATaGCGCTCTGCAGGATGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: QVKLYTFKYTPEVTWCHAQRSGG*RSAGCW Trigger: CCAACATCCTGCAGAGCGGCATCCGCCAGACCTTTG...TGCATGACACCACGTAACCTCCGGCGTGTATTTAAACGTGTATAGCTTAACCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034630.15 |
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| CDS-3UTR CCA 90 bp | CGTTTAAATACACGCCGGAGGTTACGTGGTGTCATGCAATCCCAGCGATGGAATGCCATACAGACACTGTaGCTTTTCCTCTGGCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: RLNTRRRLRGVMQSQRWNAIQTL*LFLWLL Trigger: GAGGAGCCAGAGGAAAAGCCACAGTGTCTGTATGGC...ATTCCATCGCTGGGATTGCATGACACCACGTAACCTCCGGCGTGTATTTAAACG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034630.15 |
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| CDS-3UTR GCA 90 bp | TCAGCTGTGAGGAGAGGCTCCTCATTGATGCCAGAGTCATTTTCACTCTTCTCATCCTCCTCCTGGATCTaGAGCTGGTTCTTCACTGGA | + |
|
Preference number: 4 (lower is better) Translates to: SAVRRGSSLMPESFSLFSSSSWI*SWFFTG Trigger: TCCAGTGAAGAACCAGCTGCAGATCCAGGAGGAGGA...TGAGAAGAGTGAAAATGACTCTGGCATCAATGAGGAGCCTCTCCTCACAGCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160041.2 |
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| CDS-3UTR GCA 90 bp | GCAAAGGATCCCGCGCGCAGTTGCTCTTGTTTAATCCAGGTTAAGCTATACACGGTCTGTGTCAAGGCCTaGATCTCTTGTAGCAGGACT | + |
|
Preference number: 4 (lower is better) Translates to: AKDPARSCSCLIQVKLYTVCVKA*ISCSRT Trigger: AGTCCTGCTACAAGAGATGCAGGCCTTGACACAGAC...CGTGTATAGCTTAACCTGGATTAAACAAGAGCAACTGCGCGCGGGATCCTTTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034630.15 |
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| CDS-3UTR GCA 90 bp | TTAAGCTATACACGTTTAAATACACGCCGGAGGTTACGTGGTGTCATGCAATCCTGGCGGATGCCGCTCTaGAGGATGTTGGAGATGCCT | + |
|
Preference number: 4 (lower is better) Translates to: LSYTRLNTRRRLRGVMQSWRMPL*RMLEMP Trigger: AGGCATCTCCAACATCCTGCAGAGCGGCATCCGCCA...GGATTGCATGACACCACGTAACCTCCGGCGTGTATTTAAACGTGTATAGCTTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034630.15 |
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| CDS-3UTR CCA 90 bp | TTGTTGTTGAAGGTCTGTGTCAAGGCCTGCATCTCTTGTAGCAGGACTGAATCTCCAGGCTCTCCGTCTTaGCGTTGTAGTTCCGAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: LLLKVCVKACISCSRTESPGSPS*RCSSES Trigger: GCTTTCGGAACTACAACGCCAAGACGGAGAGCCTGG...AGATTCAGTCCTGCTACAAGAGATGCAGGCCTTGACACAGACCTTCAACAACAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160041.2 |
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| CDS-3UTR CCA 90 bp | CAGGTTAAGCTATACACGTTTAAATACACGCCGGAGGTTACGTGGTGTCATGCATCCTGGATCTGCAGCTaGTTCTTCACTGGAGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: QVKLYTFKYTPEVTWCHASWICS*FFTGAR Trigger: CCTGGCTCCAGTGAAGAACCAGCTGCAGATCCAGGA...TGCATGACACCACGTAACCTCCGGCGTGTATTTAAACGTGTATAGCTTAACCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034630.15 |
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| CDS-3UTR CCA 90 bp | AGTTGCTCTTGTTTAATCCAGGTTAAGCTATACACGTTTAAATACACGCCGGAGCTGCGGGCCAGCTGGTaGACCAGCTCCTCTGAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: SCSCLIQVKLYTFKYTPELRASW*TSSSEK Trigger: CTTCTCAGAGGAGCTGGTCCACCAGCTGGCCCGCAG...CTCCGGCGTGTATTTAAACGTGTATAGCTTAACCTGGATTAAACAAGAGCAACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034630.15 |
||
| CDS-3UTR GCA 90 bp | TACACGTTTAAATACACGCCGGAGGTTACGTGGTGTCATGCAATCCCAGCGATGATGTTTGTCAGCATCTaGAGGTCTTCCACAGAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: YTFKYTPEVTWCHAIPAMMFVSI*RSSTEG Trigger: TCCCTCTGTGGAAGACCTGCAGATGCTGACAAACAT...CATCGCTGGGATTGCATGACACCACGTAACCTCCGGCGTGTATTTAAACGTGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034630.15 ENSMUST00000161978.2 |
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| CDS-3UTR CCA 90 bp | GAATCTCTGGCCCTGCGCCCGATCATGCATCCAATGATTACTAGCACTAGAAGCTTCCTCTTCAGGATCTaGAGAGTTCTGCATCATTTC | + |
|
Preference number: 4 (lower is better) Translates to: ESLALRPIMHPMITSTRSFLFRI*RVLHHF Trigger: GAAATGATGCAGAACTCTCCAGATCCTGAAGAGGAA...GCTTCTAGTGCTAGTAATCATTGGATGCATGATCGGGCGCAGGGCCAGAGATTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034630.15 |
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| CDS-3UTR TCA 90 bp | ATTTCCTCAATCACCTGGTCAGCTGTGAGGAGAGGCTCCTCATTGATGCCAGAGTCCGAAAGCAGACATTaGGCTTCTCATCAAATTCAT | + |
|
Preference number: 4 (lower is better) Translates to: ISSITWSAVRRGSSLMPESESRH*ASHQIH Trigger: ATGAATTTGATGAGAAGCTCAATGTCTGCTTTCGGA...CTCTGGCATCAATGAGGAGCCTCTCCTCACAGCTGACCAGGTGATTGAGGAAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160041.2 |
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| CDS-3UTR TCA 90 bp | CATCCAATGATTACTAGCACTAGAAGCCAACAGCAAAGGATCCCGCGCGCAGTTTCTTCTCATAAGGGATaGCTGTGTTCAGATACTGTC | + |
|
Preference number: 4 (lower is better) Translates to: HPMITSTRSQQQRIPRAVSSHKG*LCSDTV Trigger: GACAGTATCTGAACACAGTCATCCCTTATGAGAAGA...AACTGCGCGCGGGATCCTTTGCTGTTGGCTTCTAGTGCTAGTAATCATTGGATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034630.15 |
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| CDS-3UTR CCA 90 bp | AGTTGCTCTTGTTTAATCCAGGTTAAGCTATACACGTTTAAATACACGCCGGAGCCAGGCTCTCCGTCTTaGCGTTGTAGTTCCGAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: SCSCLIQVKLYTFKYTPEPGSPS*RCSSES Trigger: GCTTTCGGAACTACAACGCCAAGACGGAGAGCCTGG...CTCCGGCGTGTATTTAAACGTGTATAGCTTAACCTGGATTAAACAAGAGCAACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034630.15 |
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| CDS-3UTR CCA 90 bp | CATCCAATGATTACTAGCACTAGAAGCCAACAGCAAAGGATCCCGCGCGCAGTTCGTTATCCTCCTTCATaGCGAAGAGAATGTTTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: HPMITSTRSQQQRIPRAVRYPPS*RRECLS Trigger: TGACAAACATTCTCTTCGCCATGAAGGAGGATAACG...AACTGCGCGCGGGATCCTTTGCTGTTGGCTTCTAGTGCTAGTAATCATTGGATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034630.15 ENSMUST00000161978.2 |
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| CDS-3UTR GCA 90 bp | CGCAGTTGCTCTTGTTTAATCCAGGTTAAGCTATACACGTTTAAATACACGCCGATGTTTGTCAGCATCTaGAGGTCTTCCACAGAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: RSCSCLIQVKLYTFKYTPMFVSI*RSSTEG Trigger: TCCCTCTGTGGAAGACCTGCAGATGCTGACAAACAT...CGGCGTGTATTTAAACGTGTATAGCTTAACCTGGATTAAACAAGAGCAACTGCG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034630.15 ENSMUST00000161978.2 |
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| CDS-3UTR CCA 90 bp | AAGGATCCCGCGCGCAGTTGCTCTTGTTTAATCCAGGTTAAGCTATACACGTTTCGTTATCCTCCTTCATaGCGAAGAGAATGTTTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: KDPARSCSCLIQVKLYTFRYPPS*RRECLS Trigger: TGACAAACATTCTCTTCGCCATGAAGGAGGATAACG...AAACGTGTATAGCTTAACCTGGATTAAACAAGAGCAACTGCGCGCGGGATCCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034630.15 ENSMUST00000161978.2 |
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| 3UTR CAA 72 bp | TTGTTGTTGTTGTTGCTGCTGCTGCTGTTGCTGTTGTaGTTGTTAATGTACATTATAGGCTGGGCATCGTGC | + |
|
Preference number: 4 (lower is better) Translates to: LLLLLLLLLLLL*LLMYIIGWASC Trigger: GCACGATGCCCAGCCTATAATGTACATTAACAACAACAACAGCAACAGCAGCAGCAGCAACAACAACAACAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161978.2 |
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| 3UTR CAA 72 bp | TTGTTGTTGTTGTTGTTGCTGCTGCTGCTGTTGCTGTaGTTGTTGTTAATGTACATTATAGGCTGGGCATCG | + |
|
Preference number: 4 (lower is better) Translates to: LLLLLLLLLLLL*LLLMYIIGWAS Trigger: CGATGCCCAGCCTATAATGTACATTAACAACAACAACAGCAACAGCAGCAGCAGCAACAACAACAACAACAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161978.2 |
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| 3UTR CAA 72 bp | GTTTTGTATGAATGTGGAGCAAGAATTCATAAGATGTaGGGTCTAGACAGTGTGCTGTCATCAATGGCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: VLYECGARIHKM*GLDSVLSSMAS Trigger: ACTGGCCATTGATGACAGCACACTGTCTAGACCCAACATCTTATGAATTCTTGCTCCACATTCATACAAAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161978.2 |
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| 3UTR CAA 72 bp | AATACTCATTATGTCTGTTTGGCAAAAGACCCAAGCTaGGATCTGATCAAGCCTCTTGTTCCATTAGTTACA | + |
|
Preference number: 4 (lower is better) Translates to: NTHYVCLAKDPS*DLIKPLVPLVT Trigger: TGTAACTAATGGAACAAGAGGCTTGATCAGATCCAAGCTTGGGTCTTTTGCCAAACAGACATAATGAGTATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161978.2 |
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| CDS CCA 90 bp | CTCTGCGGGCCAGCTGGTGGACCAGCTCCTCTGAGAAGTCACGGATaGCACCCTCTACCCGGTCCAGCAGCTCTGTCAGCTCAGACCCAG | + |
|
Preference number: 5 (lower is better) Translates to: LCGPAGGPAPLRSHG*HPLPGPAALSAQTQ Trigger: CTGGGTCTGAGCTGACAGAGCTGCTGGACCGGGTAGAGGGTGCCATCCGTGACTTCTCAGAGGAGCTGGTCCACCAGCTGGCCCGCAGAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034630.15 ENSMUST00000163816.8 |
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| CDS-3UTR CAA 90 bp | GAGGGCACCTGCCTTCCCCAACACAGGTGGAGAGGGAGCAGAATCTCTGGCCCTGAGTTTGAGGCCATCTaGGTCTGCATGGGATCCTTT | + |
|
Preference number: 5 (lower is better) Translates to: EGTCLPQHRWRGSRISGPEFEAI*VCMGSF Trigger: AAAGGATCCCATGCAGACCAAGATGGCCTCAAACTC...AGGGCCAGAGATTCTGCTCCCTCTCCACCTGTGTTGGGGAAGGCAGGTGCCCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161978.2 |
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| CDS GCA 90 bp | TCTCAAGCTCAGAGAGGGAAGGGTCCTCCAGGTGATGAGGAGATGTaGCATACAGACACTGTGGCTTTTCCTCTGGCTCCTCAGTGCAAC | + |
|
Preference number: 5 (lower is better) Translates to: SQAQRGKGPPGDEEM*HTDTVAFPLAPQCN Trigger: GTTGCACTGAGGAGCCAGAGGAAAAGCCACAGTGTCTGTATGGCACATCTCCTCATCACCTGGAGGACCCTTCCCTCTCTGAGCTTGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000034630.15 ENSMUST00000161500.8 ENSMUST00000162633.9 ENSMUST00000163816.8 ENSMUST00000214772.2 |
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| CDS-3UTR CAA 90 bp | GAATCTCTGGCCCTGCGCCCGATCATGCATCCAATGATTACTAGCACTAGAAGCCCCTTCTCTATCCGGTaGCTCTGCAGGCTTAACCCC | + |
|
Preference number: 5 (lower is better) Translates to: ESLALRPIMHPMITSTRSPFSIR*LCRLNP Trigger: GGGGTTAAGCCTGCAGAGCAACCGGATAGAGAAGGG...GCTTCTAGTGCTAGTAATCATTGGATGCATGATCGGGCGCAGGGCCAGAGATTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034630.15 |
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| CDS TCA 90 bp | ACAGACACTGTGGCTTTTCCTCTGGCTCCTCAGTGCAACTGGGCCTaGTATCTTCAAACTCTTCATCCAGACTCACCAGTGGGGCCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: TDTVAFPLAPQCNWA*YLQTLHPDSPVGPP Trigger: TGGAGGCCCCACTGGTGAGTCTGGATGAAGAGTTTGAAGATATCAGGCCCAGTTGCACTGAGGAGCCAGAGGAAAAGCCACAGTGTCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000034630.15 ENSMUST00000161500.8 ENSMUST00000162633.9 ENSMUST00000163816.8 ENSMUST00000214772.2 |
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| CDS-3UTR CAA 90 bp | AGTGGTGAGGGCACCTGCCTTCCCCAACACAGGTGGAGAGGGAGCAGAATCTCTTCAATGTCAGAGCTGTaGCCATTCAGAGCTTCAATG | + |
|
Preference number: 5 (lower is better) Translates to: SGEGTCLPQHRWRGSRISSMSEL*PFRASM Trigger: CATTGAAGCTCTGAATGGCAACAGCTCTGACATTGA...AGAGATTCTGCTCCCTCTCCACCTGTGTTGGGGAAGGCAGGTGCCCTCACCACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034630.15 |
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| CDS CCA 90 bp | CAGGTGATGAGGAGATGTGCCATACAGACACTGTGGCTTTTCCTCTaGCTCCTCAGTGCAACTGGGCCTGATATCTTCAAACTCTTCATC | + |
|
Preference number: 5 (lower is better) Translates to: QVMRRCAIQTLWLFL*LLSATGPDIFKLFI Trigger: GATGAAGAGTTTGAAGATATCAGGCCCAGTTGCACTGAGGAGCCAGAGGAAAAGCCACAGTGTCTGTATGGCACATCTCCTCATCACCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000034630.15 ENSMUST00000161500.8 ENSMUST00000162633.9 ENSMUST00000163816.8 ENSMUST00000214772.2 |
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| CDS-3UTR CAA 90 bp | TATACACGTTTAAATACACGCCGGAGGTTACGTGGTGTCATGCAATCCCAGCGATCAGAGCTTCAATGTTaGGGTCCCTCCAGTCTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: YTRLNTRRRLRGVMQSQRSELQC*GPSSLL Trigger: CAGAAGACTGGAGGGACCCAAACATTGAAGCTCTGA...TCGCTGGGATTGCATGACACCACGTAACCTCCGGCGTGTATTTAAACGTGTATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034630.15 |
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| CDS-3UTR CAA 90 bp | CGCAGTTGCTCTTGTTTAATCCAGGTTAAGCTATACACGTTTAAATACACGCCGCCGCTCTGCAGGATGTaGGAGATGCCTTCCATGCTG | + |
|
Preference number: 5 (lower is better) Translates to: RSCSCLIQVKLYTFKYTPPLCRM*EMPSML Trigger: CAGCATGGAAGGCATCTCCAACATCCTGCAGAGCGG...CGGCGTGTATTTAAACGTGTATAGCTTAACCTGGATTAAACAAGAGCAACTGCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034630.15 |
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| CDS-3UTR CAA 90 bp | CTGCGCCCGATCATGCATCCAATGATTACTAGCACTAGAAGCCAACAGCAAAGGTGGCGAAGAGAATGTTaGTCAGCATCTGCAGGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: LRPIMHPMITSTRSQQQRWRREC*SASAGL Trigger: AAGACCTGCAGATGCTGACAAACATTCTCTTCGCCA...CCTTTGCTGTTGGCTTCTAGTGCTAGTAATCATTGGATGCATGATCGGGCGCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034630.15 ENSMUST00000161978.2 |
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| CDS-3UTR CAA 90 bp | ACACGTTTAAATACACGCCGGAGGTTACGTGGTGTCATGCAATCCCAGCGATGGTTCCGAAAGCAGACATaGAGCTTCTCATCAAATTCA | + |
|
Preference number: 5 (lower is better) Translates to: TRLNTRRRLRGVMQSQRWFRKQT*SFSSNS Trigger: TGAATTTGATGAGAAGCTCAATGTCTGCTTTCGGAA...CCATCGCTGGGATTGCATGACACCACGTAACCTCCGGCGTGTATTTAAACGTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034630.15 |
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| CDS-3UTR CAA 90 bp | AGACATGTGTCTCAGCCCTTCATAGGACCAGTTGTTGTTGAAGGTCTGTGTCAAAGGTCCTCCATGGACTaGAAGCTGATTATTTCGGAA | + |
|
Preference number: 5 (lower is better) Translates to: RHVSQPFIGPVVVEGLCQRSSMD*KLIISE Trigger: TTCCGAAATAATCAGCTTCAAGTCCATGGAGGACCT...TTGACACAGACCTTCAACAACAACTGGTCCTATGAAGGGCTGAGACACATGTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160041.2 |
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| CDS-3UTR CAA 90 bp | TTGGGTCCCTCCAGTCTTCTGAGAGTGAAGGGATGTAATTGTCTGTCAGAGCATTTCCGAAAGCAGACATaGAGCTTCTCATCAAATTCA | + |
|
Preference number: 5 (lower is better) Translates to: LGPSSLLRVKGCNCLSEHFRKQT*SFSSNS Trigger: TGAATTTGATGAGAAGCTCAATGTCTGCTTTCGGAA...ATGCTCTGACAGACAATTACATCCCTTCACTCTCAGAAGACTGGAGGGACCCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160041.2 |
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| CDS-3UTR CAA 90 bp | TGTTTAATCCAGGTTAAGCTATACACGTTTAAATACACGCCGGAGGTTACGTGGAGGAGAGGCTCCTCATaGATGCCAGAGTCATTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: CLIQVKLYTFKYTPEVTWRRGSS*MPESFS Trigger: TGAAAATGACTCTGGCATCAATGAGGAGCCTCTCCT...CCACGTAACCTCCGGCGTGTATTTAAACGTGTATAGCTTAACCTGGATTAAACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034630.15 |
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| CDS-3UTR CAA 90 bp | AGTTGCTCTTGTTTAATCCAGGTTAAGCTATACACGTTTAAATACACGCCGGAGAGGTCCTCCATGGACTaGAAGCTGATTATTTCGGAA | + |
|
Preference number: 5 (lower is better) Translates to: SCSCLIQVKLYTFKYTPERSSMD*KLIISE Trigger: TTCCGAAATAATCAGCTTCAAGTCCATGGAGGACCT...CTCCGGCGTGTATTTAAACGTGTATAGCTTAACCTGGATTAAACAAGAGCAACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034630.15 |
||
| CDS-3UTR CAA 90 bp | CCTAAATTCTTCCTATTGAAATTTAACATTAATCCCCCTGATCCCCATAGAAAGTGGCGAAGAGAATGTTaGTCAGCATCTGCAGGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: PKFFLLKFNINPPDPHRKWRREC*SASAGL Trigger: AAGACCTGCAGATGCTGACAAACATTCTCTTCGCCA...CTTTCTATGGGGATCAGGGGGATTAATGTTAAATTTCAATAGGAAGAATTTAGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000161978.2 |
||
| CDS CCA 72 bp | CCAGCTGGTGGACCAGCTCCTCTGAGAAGTCACGGATaGCACCCTCTACCCGGTCCAGCAGCTCTGTCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: PAGGPAPLRSHG*HPLPGPAALSA Trigger: AGCTGACAGAGCTGCTGGACCGGGTAGAGGGTGCCATCCGTGACTTCTCAGAGGAGCTGGTCCACCAGCTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034630.15 ENSMUST00000163816.8 |
||
| CDS GCA 72 bp | GTCTGTCAGCTCCTGAGGAGCCAAAGGTCTGGCGGATaGCGCTCTGCAGGATGTTGGAGATGCCTTCCATGC | + |
|
Preference number: 6 (lower is better) Translates to: VCQLLRSQRSGG*RSAGCWRCLPC Trigger: GCATGGAAGGCATCTCCAACATCCTGCAGAGCGGCATCCGCCAGACCTTTGGCTCCTCAGGAGCTGACAGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034630.15 ENSMUST00000163816.8 |
||
| CDS TCA 72 bp | AGGGATGACTGTGTTCAGATACTGTCTGTCAGCTCCTaGGGAGCCAAAGGTCTGGCGGATGCCGCTCTGCAG | + |
|
Preference number: 6 (lower is better) Translates to: RDDCVQILSVSS*GAKGLADAALQ Trigger: CTGCAGAGCGGCATCCGCCAGACCTTTGGCTCCTCAGGAGCTGACAGACAGTATCTGAACACAGTCATCCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034630.15 ENSMUST00000162235.2 ENSMUST00000163816.8 |
||
| CDS CCA 72 bp | AGATACTGTCTGTCAGCTCCTGAGGAGCCAAAGGTCTaGCGGATGCCGCTCTGCAGGATGTTGGAGATGCCT | + |
|
Preference number: 6 (lower is better) Translates to: RYCLSAPEEPKV*RMPLCRMLEMP Trigger: AGGCATCTCCAACATCCTGCAGAGCGGCATCCGCCAGACCTTTGGCTCCTCAGGAGCTGACAGACAGTATCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034630.15 ENSMUST00000163816.8 |
||
| CDS TCA 72 bp | TTCTTCATCAGTTCCCGCTGCTCCCTCTGCTTGTTCTaGACCTCAATGAGCACCGTGATGAAGGAGTTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: FFISSRCSLCLF*TSMSTVMKEFF Trigger: GAAGAACTCCTTCATCACGGTGCTCATTGAGGTTCAGAACAAGCAGAGGGAGCAGCGGGAACTGATGAAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034630.15 ENSMUST00000163816.8 |
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| CDS TCA 72 bp | CCACAGAGGGAGGAGAGGATTTCTTCTCATAAGGGATaGCTGTGTTCAGATACTGTCTGTCAGCTCCTGAGG | + |
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Preference number: 6 (lower is better) Translates to: PQREERISSHKG*LCSDTVCQLLR Trigger: CCTCAGGAGCTGACAGACAGTATCTGAACACAGTCATCCCTTATGAGAAGAAATCCTCTCCTCCCTCTGTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034630.15 ENSMUST00000162235.2 ENSMUST00000163816.8 |
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| CDS CCA 72 bp | AGGAGATGTGCCATACAGACACTGTGGCTTTTCCTCTaGCTCCTCAGTGCAACTGGGCCTGATATCTTCAAA | + |
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Preference number: 6 (lower is better) Translates to: RRCAIQTLWLFL*LLSATGPDIFK Trigger: TTTGAAGATATCAGGCCCAGTTGCACTGAGGAGCCAGAGGAAAAGCCACAGTGTCTGTATGGCACATCTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000034630.15 ENSMUST00000161500.8 ENSMUST00000162633.9 ENSMUST00000163816.8 ENSMUST00000214772.2 |
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| CDS TCA 72 bp | TCTCCGTCTTGGCGTTGTAGTTCCGAAAGCAGACATTaGGCTTCTCATCAAATTCATTCACGAGGTCCTCCA | + |
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Preference number: 6 (lower is better) Translates to: SPSWRCSSESRH*ASHQIHSRGPP Trigger: TGGAGGACCTCGTGAATGAATTTGATGAGAAGCTCAATGTCTGCTTTCGGAACTACAACGCCAAGACGGAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000034630.15 ENSMUST00000160041.2 ENSMUST00000161500.8 ENSMUST00000162633.9 ENSMUST00000163816.8 |
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| CDS CAA 90 bp | ACATTGAGCTTCTCATCAAATTCATTCACGAGGTCCTCCATGGACTaGAAGCTGATTATTTCGGAAGAAAAATTCTCAAGCTCAGAGAGG | + |
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Preference number: 6 (lower is better) Translates to: TLSFSSNSFTRSSMD*KLIISEEKFSSSER Trigger: CCTCTCTGAGCTTGAGAATTTTTCTTCCGAAATAATCAGCTTCAAGTCCATGGAGGACCTCGTGAATGAATTTGATGAGAAGCTCAATGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000034630.15 ENSMUST00000160041.2 ENSMUST00000161500.8 ENSMUST00000162633.9 ENSMUST00000163816.8 ENSMUST00000214772.2 |
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| CDS CAA 72 bp | TTCTCATCAAATTCATTCACGAGGTCCTCCATGGACTaGAAGCTGATTATTTCGGAAGAAAAATTCTCAAGC | + |
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Preference number: 6 (lower is better) Translates to: FSSNSFTRSSMD*KLIISEEKFSS Trigger: GCTTGAGAATTTTTCTTCCGAAATAATCAGCTTCAAGTCCATGGAGGACCTCGTGAATGAATTTGATGAGAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000034630.15 ENSMUST00000160041.2 ENSMUST00000161500.8 ENSMUST00000162633.9 ENSMUST00000163816.8 ENSMUST00000214772.2 |
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