RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FES (Mus musculus)

Ensembl gene IDs: ENSMUSG00000053158

Ensembl transcript IDs: ENSMUST00000080932.8, ENSMUST00000205617.2, ENSMUST00000206479.2, ENSMUST00000206539.2, ENSMUST00000206698.2, ENSMUST00000206728.2, ENSMUST00000206735.2, ENSMUST00000206744.2

Found 569 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CCCTCTCGCTCCTGCTCCGTGGAGGAGGTGGAATGGCGGTCATCCTaGAGGAGCGGCACGGCTGGGGGCTCGCCCGTGCCGAGCTGCTCC +
Preference number: 1 (lower is better)
Translates to: PSRSCSVEEVEWRSS*RSGTAGGSPVPSCS
Trigger: GGAGCAGCTCGGCACGGGCGAGCCCCCAGCCGTGCCGCTCCTTCAGGATGACCGCCATTCCACCTCCTCCACGGAGCAGGAGCGAGAGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000205617.2
3UTR GCA 90 bp GGAGCGGCACGGCTGGGGGCTCGCCCGTGCCGAGCTGCTCCATCTTaGTCTGCAGAAGTTCCTGCTGGGCCTGAAGCTTGTCCTGGCTGC +
Preference number: 1 (lower is better)
Translates to: GAARLGARPCRAAPS*SAEVPAGPEACPGC
Trigger: GCAGCCAGGACAAGCTTCAGGCCCAGCAGGAACTTCTGCAGAGCAAGATGGAGCAGCTCGGCACGGGCGAGCCCCCAGCCGTGCCGCTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206744.2
3UTR CCA 90 bp CGTGGAGGAGGTGGAATGGCGGTCATCCTGAAGGAGCGGCACGGCTaGGGGCTCGCCCGTGCCGAGCTGCTCCATCTTGCTCTGCAGAAG +
Preference number: 1 (lower is better)
Translates to: RGGGGMAVILKERHG*GLARAELLHLALQK
Trigger: CTTCTGCAGAGCAAGATGGAGCAGCTCGGCACGGGCGAGCCCCCAGCCGTGCCGCTCCTTCAGGATGACCGCCATTCCACCTCCTCCACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206744.2
3UTR TCA 90 bp GTGGAACCCGAGGTGGGACGGGGTGAGGGGCCTGGACGAAGCTGGTaGGGAAAGTCACAGGTAGAGCCCAGAAGGCTGGCGAGTCCCTGG +
Preference number: 1 (lower is better)
Translates to: VEPEVGRGEGPGRSW*GKSQVEPRRLASPW
Trigger: CCAGGGACTCGCCAGCCTTCTGGGCTCTACCTGTGACTTTCCTCACCAGCTTCGTCCAGGCCCCTCACCCCGTCCCACCTCGGGTTCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000205617.2
ENSMUST00000206479.2
3UTR GCA 90 bp CAGGCCAGGCAGCATGAACCGGTGGTGGTGGTGGTGGTGCAGCTGTaGGGCCCTCACACCCAGGACGTAGCGGTTGTGGTGGGCAAAGAG +
Preference number: 1 (lower is better)
Translates to: QARQHEPVVVVVVQL*GPHTQDVAVVVGKE
Trigger: CTCTTTGCCCACCACAACCGCTACGTCCTGGGTGTGAGGGCCGCACAGCTGCACCACCACCACCACCACCGGTTCATGCTGCCTGGCCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206744.2
3UTR GCA 90 bp GGCTGGCGAGTCCCTGGGCCGTGGGCTGCACTTACCCTTCCGATCTaGTCTCCCAGCACCAGGTCCTCGTGCTTCAGAACCCACTTGTCC +
Preference number: 1 (lower is better)
Translates to: GWRVPGPWAALTLPI*SPSTRSSCFRTHLS
Trigger: GGACAAGTGGGTTCTGAAGCACGAGGACCTGGTGCTGGGAGAGCAGATCGGAAGGGTAAGTGCAGCCCACGGCCCAGGGACTCGCCAGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000205617.2
ENSMUST00000206479.2
3UTR GCA 90 bp TCACAGGTAGAGCCCAGAAGGCTGGCGAGTCCCTGGGCCGTGGGCTaGACTTACCCTTCCGATCTGCTCTCCCAGCACCAGGTCCTCGTG +
Preference number: 1 (lower is better)
Translates to: SQVEPRRLASPWAVG*TYPSDLLSQHQVLV
Trigger: CACGAGGACCTGGTGCTGGGAGAGCAGATCGGAAGGGTAAGTGCAGCCCACGGCCCAGGGACTCGCCAGCCTTCTGGGCTCTACCTGTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000205617.2
ENSMUST00000206479.2
3UTR TCA 90 bp TCTCCTCGTGCAAATCCTGCAGTGACTGCAGCAGGCCAGGCAGCATaGACCGGTGGTGGTGGTGGTGGTGCAGCTGTGCGGCCCTCACAC +
Preference number: 1 (lower is better)
Translates to: SPRANPAVTAAGQAA*TGGGGGGAAVRPSH
Trigger: GTGTGAGGGCCGCACAGCTGCACCACCACCACCACCACCGGTTCATGCTGCCTGGCCTGCTGCAGTCACTGCAGGATTTGCACGAGGAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206744.2
3UTR CCA 90 bp AGAGTGGGAGTGGGCGCGCATATACCCATGCTCAGGGCATGGGGTTaGTATCCCAGAGGCCTAAGGAGCAGCCCCCACTCCCTGGGCACT +
Preference number: 1 (lower is better)
Translates to: RVGVGAHIPMLRAWG*YPRGLRSSPHSLGT
Trigger: AGTGCCCAGGGAGTGGGGGCTGCTCCTTAGGCCTCTGGGATACCAACCCCATGCCCTGAGCATGGGTATATGCGCGCCCACTCCCACTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000206744.2
3UTR GCA 90 bp TCCTGCTGCAGCTGCTGCCACTGCTCGTTGTACGTCTTTCTCAGGTaGTGCCGCTCCCGGATCAGCACGCTCAGTTTGCTCAAGGGCCCC +
Preference number: 1 (lower is better)
Translates to: SCCSCCHCSLYVFLR*CRSRISTLSLLKGP
Trigger: GGGGCCCTTGAGCAAACTGAGCGTGCTGATCCGGGAGCGGCAGCACCTGAGAAAGACGTACAACGAGCAGTGGCAGCAGCTGCAGCAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206539.2
3UTR GCA 90 bp TCCTGGCTGTGGGTCTTGGTGAGCTCCTGCTGCAGCTGCTGCCACTaGTCGTTGTACGTCTTTCTCAGGTGCTGCCGCTCCCGGATCAGC +
Preference number: 1 (lower is better)
Translates to: SWLWVLVSSCCSCCH*SLYVFLRCCRSRIS
Trigger: GCTGATCCGGGAGCGGCAGCACCTGAGAAAGACGTACAACGAGCAGTGGCAGCAGCTGCAGCAGGAGCTCACCAAGACCCACAGCCAGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206539.2
3UTR TCA 90 bp CGGGGGTGGGTGTTCTGTTCCTCACTTTGGAGCTCACGCTGCAGCTaGCTGACCATCTCCTGCCGGCTCAGCACCTCTTTGGTGGCCACA +
Preference number: 1 (lower is better)
Translates to: RGWVFCSSLWSSRCS*LTISCRLSTSLVAT
Trigger: TGTGGCCACCAAAGAGGTGCTGAGCCGGCAGGAGATGGTCAGTCAGCTGCAGCGTGAGCTCCAAAGTGAGGAACAGAACACCCACCCCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206744.2
3UTR GCA 90 bp TCCTTCAGAATGCCCGCCATCTCCTCGTGCAAATCCTGCAGTGACTaGAGCAGGCCAGGCAGCATGAACCGGTGGTGGTGGTGGTGGTGC +
Preference number: 1 (lower is better)
Translates to: SFRMPAISSCKSCSD*SRPGSMNRWWWWWC
Trigger: GCACCACCACCACCACCACCGGTTCATGCTGCCTGGCCTGCTGCAGTCACTGCAGGATTTGCACGAGGAGATGGCGGGCATTCTGAAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000206479.2
ENSMUST00000206744.2
3UTR GCA 90 bp TCAATGTCCTGGCTGTGGGTCTTGGTGAGCTCCTGCTGCAGCTGCTaGCACTGCTCGTTGTACGTCTTTCTCAGGTGCTGCCGCTCCCGG +
Preference number: 1 (lower is better)
Translates to: SMSWLWVLVSSCCSC*HCSLYVFLRCCRSR
Trigger: CCGGGAGCGGCAGCACCTGAGAAAGACGTACAACGAGCAGTGGCAGCAGCTGCAGCAGGAGCTCACCAAGACCCACAGCCAGGACATTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206539.2
3UTR CCA 90 bp TACACGCTCGCCTCCGGGTCTCACCGATGCCGCTTGCGGATACTGTaGAGCTCCTGGCAGATGATGCTGAAACTAGGTCTCTGCCCAGGC +
Preference number: 1 (lower is better)
Translates to: YTLASGSHRCRLRIL*SSWQMMLKLGLCPG
Trigger: GCCTGGGCAGAGACCTAGTTTCAGCATCATCTGCCAGGAGCTCCACAGTATCCGCAAGCGGCATCGGTGAGACCCGGAGGCGAGCGTGTA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206735.2
ENSMUST00000206744.2
3UTR TCA 90 bp GGCCTCAGGGGCAGTCCACTTAACAGGGACTTGTCTGAGGCCCGCTaGGGCGGCATAGATCCCATCAGCTTCTTCGCGGGACATCCCAAA +
Preference number: 1 (lower is better)
Translates to: GLRGSPLNRDLSEAR*GGIDPISFFAGHPK
Trigger: TTTGGGATGTCCCGCGAAGAAGCTGATGGGATCTATGCCGCCTCAGCGGGCCTCAGACAAGTCCCTGTTAAGTGGACTGCCCCTGAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206744.2
3UTR GCA 90 bp CAGGCTCCGGACATACTTGTCTTTGGCCTTGTCTCGATCCTTGTCTaGCAGGTGAGAGGTGAGAGGGAGGGAGGGAGAGTGGGAGTGGGC +
Preference number: 1 (lower is better)
Translates to: QAPDILVFGLVSILV*QVRGEREGGRVGVG
Trigger: GCCCACTCCCACTCTCCCTCCCTCCCTCTCACCTCTCACCTGGCAGACAAGGATCGAGACAAGGCCAAAGACAAGTATGTCCGGAGCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206744.2
3UTR GCA 90 bp TGCAGGATGTCCTTCAGAATGCCCGCCATCTCCTCGTGCAAATCCTaGAGTGACTGCAGCAGGCCAGGCAGCATGAACCGGTGGTGGTGG +
Preference number: 1 (lower is better)
Translates to: CRMSFRMPAISSCKS*SDCSRPGSMNRWWW
Trigger: CCACCACCACCGGTTCATGCTGCCTGGCCTGCTGCAGTCACTGCAGGATTTGCACGAGGAGATGGCGGGCATTCTGAAGGACATCCTGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000206479.2
ENSMUST00000206744.2
3UTR GCA 90 bp GTCGGGGCTGGCCATCCCACATCACAGACAGTACATACTCCTGCTTaGCCTGGCTCTCCCGAACCAGGAAGTCCCCGGAGTGTGTTAGCA +
Preference number: 1 (lower is better)
Translates to: VGAGHPTSQTVHTPA*PGSPEPGSPRSVLA
Trigger: TGCTAACACACTCCGGGGACTTCCTGGTTCGGGAGAGCCAGGGCAAGCAGGAGTATGTACTGTCTGTGATGTGGGATGGCCAGCCCCGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206744.2
3UTR GCA 90 bp CGAAGGCGGCCACTAAACACCTCTCCGAAGTTCCCCCTTCCGATCTaGTCTCCCAGCACCAGGTCCTCGTGCTTCAGAACCCACTTGTCC +
Preference number: 1 (lower is better)
Translates to: RRRPLNTSPKFPLPI*SPSTRSSCFRTHLS
Trigger: GGACAAGTGGGTTCTGAAGCACGAGGACCTGGTGCTGGGAGAGCAGATCGGAAGGGGGAACTTCGGAGAGGTGTTTAGTGGCCGCCTTCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000206744.2
3UTR GCA 90 bp ACGTCTTTCTCAGGTGCTGCCGCTCCCGGATCAGCACGCTCAGTTTaGTCAAGGGCCCCGAGTTCAGATCTTCTGCATGCTGCCGCAGCA +
Preference number: 1 (lower is better)
Translates to: TSFSGAAAPGSARSV*SRAPSSDLLHAAAA
Trigger: TGCTGCGGCAGCATGCAGAAGATCTGAACTCGGGGCCCTTGAGCAAACTGAGCGTGCTGATCCGGGAGCGGCAGCACCTGAGAAAGACGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000206539.2
3UTR GCA 90 bp CTAAGAGAGGAATTTGGGCAGGAAGAAGGATGGAGAGCCGCACCCTaGCGGAAGCCCTGTTGCTGGTGGTTGGAACCCTGGTCTTGGAGC +
Preference number: 1 (lower is better)
Translates to: LREEFGQEEGWRAAP*RKPCCWWLEPWSWS
Trigger: GCTCCAAGACCAGGGTTCCAACCACCAGCAACAGGGCTTCCGGCAGGGTGCGGCTCTCCATCCTTCTTCCTGCCCAAATTCCTCTCTTAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000080932.8
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206728.2
ENSMUST00000206735.2
ENSMUST00000206744.2
3UTR GCA 90 bp TGGGAGTGTCTCTCGGCAAGACTTCACAGCCACCGGGGTATTGTCTaGACGAAGGCGGCCACTAAACACCTCTCCGAAGTTCCCCCTTCC +
Preference number: 1 (lower is better)
Translates to: WECLSARLHSHRGIV*TKAATKHLSEVPPS
Trigger: GGAAGGGGGAACTTCGGAGAGGTGTTTAGTGGCCGCCTTCGTGCAGACAATACCCCGGTGGCTGTGAAGTCTTGCCGAGAGACACTCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000206744.2
3UTR GCA 90 bp CCTCAGAGAAGACAGAAAGCTAAGGGAAAGAAGAGTGGCCGCGAATaGCTGCAGCCTTGGACACGTGACTGCAGGTGGGGGCCCTGGCTA +
Preference number: 1 (lower is better)
Translates to: PQRRQKAKGKKSGRE*LQPWTRDCRWGPWL
Trigger: TAGCCAGGGCCCCCACCTGCAGTCACGTGTCCAAGGCTGCAGGCATTCGCGGCCACTCTTCTTTCCCTTAGCTTTCTGTCTTCTCTGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000206479.2
3UTR GCA 90 bp TTCTCAATGTCCTGGCTGTGGGTCTTGGTGAGCTCCTGCTGCAGCTaGTGCCACTGCTCGTTGTACGTCTTTCTCAGGTGCTGCCGCTCC +
Preference number: 1 (lower is better)
Translates to: FSMSWLWVLVSSCCS*CHCSLYVFLRCCRS
Trigger: GGAGCGGCAGCACCTGAGAAAGACGTACAACGAGCAGTGGCAGCAGCTGCAGCAGGAGCTCACCAAGACCCACAGCCAGGACATTGAGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206539.2
3UTR CCA 90 bp GGCTGGCCATCCCACATCACAGACAGTACATACTCCTGCTTGCCCTaGCTCTCCCGAACCAGGAAGTCCCCGGAGTGTGTTAGCAGCTCA +
Preference number: 1 (lower is better)
Translates to: GWPSHITDSTYSCLP*LSRTRKSPECVSSS
Trigger: TGAGCTGCTAACACACTCCGGGGACTTCCTGGTTCGGGAGAGCCAGGGCAAGCAGGAGTATGTACTGTCTGTGATGTGGGATGGCCAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206744.2
3UTR CCA 90 bp CCAGCACTGCTCCATGAGCCTGAAGACCGCATCAGGGCACAGCTCTaGGCAAGGCAGACGATGCCCCTTTTCTACAAACTCCCGTGTCTG +
Preference number: 1 (lower is better)
Translates to: PALLHEPEDRIRAQL*ARQTMPLFYKLPCL
Trigger: CAGACACGGGAGTTTGTAGAAAAGGGGCATCGTCTGCCTTGCCCAGAGCTGTGCCCTGATGCGGTCTTCAGGCTCATGGAGCAGTGCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000205617.2
ENSMUST00000206744.2
3UTR CCA 90 bp CAGAAAGCTAAGGGAAAGAAGAGTGGCCGCGAATGCCTGCAGCCTTaGACACGTGACTGCAGGTGGGGGCCCTGGCTAGTACCTCTTTGC +
Preference number: 1 (lower is better)
Translates to: QKAKGKKSGRECLQP*TRDCRWGPWLVPLC
Trigger: GCAAAGAGGTACTAGCCAGGGCCCCCACCTGCAGTCACGTGTCCAAGGCTGCAGGCATTCGCGGCCACTCTTCTTTCCCTTAGCTTTCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000206479.2
3UTR GCA 90 bp AGGTATTCCTGCAGGATGTCCTTCAGAATGCCCGCCATCTCCTCGTaGAAATCCTGCAGTGACTGCAGCAGGCCAGGCAGCATGAACCGG +
Preference number: 1 (lower is better)
Translates to: RYSCRMSFRMPAISS*KSCSDCSRPGSMNR
Trigger: CCGGTTCATGCTGCCTGGCCTGCTGCAGTCACTGCAGGATTTGCACGAGGAGATGGCGGGCATTCTGAAGGACATCCTGCAGGAATACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000206479.2
ENSMUST00000206744.2
3UTR GCA 90 bp AGGCTGGATCCGAGCAGCAGCTGCAGCCAGCTCACGGTGAATGGATaGCACATCGTCCTGCACCAGACTGCTAATCTCCAGGTATTCCTG +
Preference number: 1 (lower is better)
Translates to: RLDPSSSCSQLTVNG*HIVLHQTANLQVFL
Trigger: CAGGAATACCTGGAGATTAGCAGTCTGGTGCAGGACGATGTGGCATCCATTCACCGTGAGCTGGCTGCAGCTGCTGCTCGGATCCAGCCT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000206479.2
ENSMUST00000206744.2
3UTR GCA 90 bp TTGTCCTGGCTGCACAGTGCTATCTGCAACCCTTGTATTGCCTCTTaGAGCATCTGCCTCTTGCTCAGAAGCTGCACCCGTTCCCGGGGG +
Preference number: 1 (lower is better)
Translates to: LSWLHSAICNPCIAS*SICLLLRSCTRSRG
Trigger: CCCCCGGGAACGGGTGCAGCTTCTGAGCAAGAGGCAGATGCTGCAAGAGGCAATACAAGGGTTGCAGATAGCACTGTGCAGCCAGGACAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206744.2
3UTR GCA 90 bp AAATGTCGGGGCTGGCCATCCCACATCACAGACAGTACATACTCCTaGTTGCCCTGGCTCTCCCGAACCAGGAAGTCCCCGGAGTGTGTT +
Preference number: 1 (lower is better)
Translates to: KCRGWPSHITDSTYS*LPWLSRTRKSPECV
Trigger: AACACACTCCGGGGACTTCCTGGTTCGGGAGAGCCAGGGCAAGCAGGAGTATGTACTGTCTGTGATGTGGGATGGCCAGCCCCGACATTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206744.2
3UTR GCA 90 bp CCTGTGGATACAACACTTGCTTTCCAAGTATTCCATGCCAGCAGCTaGGTCCCCTACCATCTGCAGCAGAGTCTTCACCCGCAGGCGGGC +
Preference number: 1 (lower is better)
Translates to: PVDTTLAFQVFHASS*VPYHLQQSLHPQAG
Trigger: GCCCGCCTGCGGGTGAAGACTCTGCTGCAGATGGTAGGGGACGCAGCTGCTGGCATGGAATACTTGGAAAGCAAGTGTTGTATCCACAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206744.2
3UTR GCA 90 bp TGGGAGTGTCTCTCGGCAAGACTTCACAGCCACCGGGGTATTGTCTaGACGAAGGCGGCCACTAAACACCTCTCCGAAGTTCCCCTGCAA +
Preference number: 1 (lower is better)
Translates to: WECLSARLHSHRGIV*TKAATKHLSEVPLQ
Trigger: TTGCAGGGGAACTTCGGAGAGGTGTTTAGTGGCCGCCTTCGTGCAGACAATACCCCGGTGGCTGTGAAGTCTTGCCGAGAGACACTCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000205617.2
ENSMUST00000206479.2
3UTR TCA 90 bp GGGAAGACGGAAGGAATAGGGTCAGCTTCCCAGCCCACTCACATCTaGGGACTGGATGATGAAATGTCGGGGCTGGCCATCCCACATCAC +
Preference number: 1 (lower is better)
Translates to: GKTEGIGSASQPTHI*GLDDEMSGLAIPHH
Trigger: GTGATGTGGGATGGCCAGCCCCGACATTTCATCATCCAGTCCTCAGATGTGAGTGGGCTGGGAAGCTGACCCTATTCCTTCCGTCTTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000206479.2
3UTR GCA 90 bp TTCAGCTTCTCAATGTCCTGGCTGTGGGTCTTGGTGAGCTCCTGCTaGAGCTGCTGCCACTGCTCGTTGTACGTCTTTCTCAGGTGCTGC +
Preference number: 1 (lower is better)
Translates to: FSFSMSWLWVLVSSC*SCCHCSLYVFLRCC
Trigger: GCAGCACCTGAGAAAGACGTACAACGAGCAGTGGCAGCAGCTGCAGCAGGAGCTCACCAAGACCCACAGCCAGGACATTGAGAAGCTGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206539.2
3UTR CCA 90 bp CCCAGCCCACTCACATCTGAGGACTGGATGATGAAATGTCGGGGCTaGCCATCCCACATCACAGACAGTACATACTCCTGCTTGCCCTGG +
Preference number: 1 (lower is better)
Translates to: PSPLTSEDWMMKCRG*PSHITDSTYSCLPW
Trigger: CCAGGGCAAGCAGGAGTATGTACTGTCTGTGATGTGGGATGGCCAGCCCCGACATTTCATCATCCAGTCCTCAGATGTGAGTGGGCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000206479.2
3UTR GCA 90 bp CAGCCAGGTCCCTGTGGATACAACACTTGCTTTCCAAGTATTCCATaGCAGCAGCTGCGTCCCCTACCATCTGCAGCAGAGTCTTCACCC +
Preference number: 1 (lower is better)
Translates to: QPGPCGYNTCFPSIP*QQLRPLPSAAESSP
Trigger: GGGTGAAGACTCTGCTGCAGATGGTAGGGGACGCAGCTGCTGGCATGGAATACTTGGAAAGCAAGTGTTGTATCCACAGGGACCTGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206744.2
3UTR CCA 90 bp GATGACCCACCTTGCTTCTTGCAGAAACTTGGCCTTGAGGTCAGGTaGGAGTGTCTCTCGGCAAGACTTCACAGCCACCGGGGTATTGTC +
Preference number: 1 (lower is better)
Translates to: DDPPCFLQKLGLEVR*ECLSARLHSHRGIV
Trigger: GACAATACCCCGGTGGCTGTGAAGTCTTGCCGAGAGACACTCCCACCTGACCTCAAGGCCAAGTTTCTGCAAGAAGCAAGGTGGGTCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000206479.2
3UTR GCA 90 bp GATGCCACATCGTCCTGCACCAGACTGCTAATCTCCAGGTATTCCTaGAGGATGTCCTTCAGAATGCCCGCCATCTCCTCGTGCAAATCC +
Preference number: 1 (lower is better)
Translates to: DATSSCTRLLISRYS*RMSFRMPAISSCKS
Trigger: GGATTTGCACGAGGAGATGGCGGGCATTCTGAAGGACATCCTGCAGGAATACCTGGAGATTAGCAGTCTGGTGCAGGACGATGTGGCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000206479.2
ENSMUST00000206744.2
3UTR GCA 90 bp CAAGGGACCTCGAGCCTCACTCATTTGATGACCCACCTTGCTTCTTaGAGAAACTTGGCCTTGAGGTCAGGTGGGAGTGTCTCTCGGCAA +
Preference number: 1 (lower is better)
Translates to: QGTSSLTHLMTHLAS*RNLALRSGGSVSRQ
Trigger: TTGCCGAGAGACACTCCCACCTGACCTCAAGGCCAAGTTTCTGCAAGAAGCAAGGTGGGTCATCAAATGAGTGAGGCTCGAGGTCCCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206479.2
3UTR CCA 90 bp AGCCGGTACAGGTTATCTGAGGACTGGATGATGAAATGTCGGGGCTaGCCATCCCACATCACAGACAGTACATACTCCTGCTTGCCCTGG +
Preference number: 1 (lower is better)
Translates to: SRYRLSEDWMMKCRG*PSHITDSTYSCLPW
Trigger: CCAGGGCAAGCAGGAGTATGTACTGTCTGTGATGTGGGATGGCCAGCCCCGACATTTCATCATCCAGTCCTCAGATAACCTGTACCGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000205617.2
ENSMUST00000206744.2
3UTR TCA 90 bp GGTTGTACTGTTTCAGGATCCTTGCTTCTTGCAGAAACTTGGCCTTaGGGTCAGGTGGGAGTGTCTCTCGGCAAGACTTCACAGCCACCG +
Preference number: 1 (lower is better)
Translates to: GCTVSGSLLLAETWP*GQVGVSLGKTSQPP
Trigger: CGGTGGCTGTGAAGTCTTGCCGAGAGACACTCCCACCTGACCTCAAGGCCAAGTTTCTGCAAGAAGCAAGGATCCTGAAACAGTACAACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000205617.2
ENSMUST00000206744.2
3UTR GCA 90 bp TCTCACACAAGGGACCTCGAGCCTCACTCATTTGATGACCCACCTTaGTTCTTGCAGAAACTTGGCCTTGAGGTCAGGTGGGAGTGTCTC +
Preference number: 1 (lower is better)
Translates to: SHTRDLEPHSFDDPP*FLQKLGLEVRWECL
Trigger: GAGACACTCCCACCTGACCTCAAGGCCAAGTTTCTGCAAGAAGCAAGGTGGGTCATCAAATGAGTGAGGCTCGAGGTCCCTTGTGTGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206479.2
3UTR CCA 90 bp TTTCAGGATCCTTGCTTCTTGCAGAAACTTGGCCTTGAGGTCAGGTaGGAGTGTCTCTCGGCAAGACTTCACAGCCACCGGGGTATTGTC +
Preference number: 1 (lower is better)
Translates to: FQDPCFLQKLGLEVR*ECLSARLHSHRGIV
Trigger: GACAATACCCCGGTGGCTGTGAAGTCTTGCCGAGAGACACTCCCACCTGACCTCAAGGCCAAGTTTCTGCAAGAAGCAAGGATCCTGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000205617.2
ENSMUST00000206744.2
3UTR CCA 90 bp GGCTGTTTCTGTGTGCAGACCCCGATGAGACGCACAATGTTGGGGTaGTTGTACTGTTTCAGGATCCTTGCTTCTTGCAGAAACTTGGCC +
Preference number: 1 (lower is better)
Translates to: GCFCVQTPMRRTMLG*LYCFRILASCRNLA
Trigger: GGCCAAGTTTCTGCAAGAAGCAAGGATCCTGAAACAGTACAACCACCCCAACATTGTGCGTCTCATCGGGGTCTGCACACAGAAACAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000205617.2
ENSMUST00000206744.2
3UTR GCA 90 bp AATGTTGGGGTGGTTGTACTGTTTCAGGATCCTGGGGAGCACTGCTaGTTAGGCTACATGCAATCTGTGCTCACAGCCTTCTACATCTGC +
Preference number: 1 (lower is better)
Translates to: NVGVVVLFQDPGEHC*LGYMQSVLTAFYIC
Trigger: GCAGATGTAGAAGGCTGTGAGCACAGATTGCATGTAGCCTAAGCAGCAGTGCTCCCCAGGATCCTGAAACAGTACAACCACCCCAACATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000206479.2
3UTR GCA 90 bp CACAATGTTGGGGTGGTTGTACTGTTTCAGGATCCTGGGGAGCACTaGTGCTTAGGCTACATGCAATCTGTGCTCACAGCCTTCTACATC +
Preference number: 1 (lower is better)
Translates to: HNVGVVVLFQDPGEH*CLGYMQSVLTAFYI
Trigger: GATGTAGAAGGCTGTGAGCACAGATTGCATGTAGCCTAAGCAGCAGTGCTCCCCAGGATCCTGAAACAGTACAACCACCCCAACATTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000206479.2
3UTR CCA 90 bp CCGATGAACACAACTTGTTTTATTTTTCTGCCTAAGAGAGGAATTTaGGCAGGAAGAAGGATGGAGAGCCGCACCCTGCCGGAAGCCCTG +
Preference number: 1 (lower is better)
Translates to: PMNTTCFIFLPKRGI*AGRRMESRTLPEAL
Trigger: CAGGGCTTCCGGCAGGGTGCGGCTCTCCATCCTTCTTCCTGCCCAAATTCCTCTCTTAGGCAGAAAAATAAAACAAGTTGTGTTCATCGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000080932.8
ENSMUST00000205617.2
ENSMUST00000206735.2
3UTR TCA 90 bp ATGGGAAATCCAGAAATCACTTTTCTTTGGGTTGGGAAAGCATTCTaGTTGGAAAGTGGCTGGCATTTTACATTAACAGAGGAGCTTGGC +
Preference number: 1 (lower is better)
Translates to: MGNPEITFLWVGKAF*LESGWHFTLTEELG
Trigger: GCCAAGCTCCTCTGTTAATGTAAAATGCCAGCCACTTTCCAATCAGAATGCTTTCCCAACCCAAAGAAAAGTGATTTCTGGATTTCCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000205617.2
ENSMUST00000206479.2
3UTR TCA 90 bp CCTTGTAGAGATATAAAAGTTACCTGTGCCACCTCCTCTAAGAAGTaGCATGGGAAATCCAGAAATCACTTTTCTTTGGGTTGGGAAAGC +
Preference number: 1 (lower is better)
Translates to: PCRDIKVTCATSSKK*HGKSRNHFSLGWES
Trigger: GCTTTCCCAACCCAAAGAAAAGTGATTTCTGGATTTCCCATGTCACTTCTTAGAGGAGGTGGCACAGGTAACTTTTATATCTCTACAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000205617.2
ENSMUST00000206479.2
3UTR TCA 90 bp TTTGAGAAGAAAGAGTTTGGTGGGAACATCTTAGGAGCTTGGTCCTaGGGTACCATCATAAATCTGTGGCCTTACCCTTTTCTACAAACT +
Preference number: 1 (lower is better)
Translates to: FEKKEFGGNILGAWS*GTIINLWPYPFLQT
Trigger: AGTTTGTAGAAAAGGGTAAGGCCACAGATTTATGATGGTACCTCAGGACCAAGCTCCTAAGATGTTCCCACCAAACTCTTTCTTCTCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000206479.2
3UTR-3UTR GCA 90 bp GGCTGGGGGCTCGCCCGTGCCGAGCTGCTCCATCTTGCTCTGCAGAAGTTCCTGGTGGTGGTGCAGCTGTaGGGCCCTCACACCCAGGAC +
Preference number: 2 (lower is better)
Translates to: GWGLARAELLHLALQKFLVVVQL*GPHTQD
Trigger: GTCCTGGGTGTGAGGGCCGCACAGCTGCACCACCAC...CAGGAACTTCTGCAGAGCAAGATGGAGCAGCTCGGCACGGGCGAGCCCCCAGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000206744.2
3UTR-3UTR CCA 90 bp AGAAGGATGGAGAGCCGCACCCTGCCGGAAGCCCTGTTGCTGGTGGTTGGAACCCGGTGGTGGTGGTGGTaGTGCAGCTGTGCGGCCCTC +
Preference number: 2 (lower is better)
Translates to: RRMESRTLPEALLLVVGTRWWWW*CSCAAL
Trigger: GAGGGCCGCACAGCTGCACCACCACCACCACCACCG...GGTTCCAACCACCAGCAACAGGGCTTCCGGCAGGGTGCGGCTCTCCATCCTTCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206744.2
3UTR CAA 90 bp GAGAGTGGGAGTGGGCGCGCATATACCCATGCTCAGGGCATGGGGTaGGTATCCCAGAGGCCTAAGGAGCAGCCCCCACTCCCTGGGCAC +
Preference number: 2 (lower is better)
Translates to: ESGSGRAYTHAQGMG*VSQRPKEQPPLPGH
Trigger: GTGCCCAGGGAGTGGGGGCTGCTCCTTAGGCCTCTGGGATACCAACCCCATGCCCTGAGCATGGGTATATGCGCGCCCACTCCCACTCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000206744.2
3UTR-3UTR TCA 90 bp AGCTGCGTCCCCTACCATCTGCAGCAGAGTCTTCACCCGCAGGCGGGCTCCCTCGTGCAAATCCTGCAGTaGCTGCAGCAGGCCAGGCAG +
Preference number: 2 (lower is better)
Translates to: SCVPYHLQQSLHPQAGSLVQILQ*LQQARQ
Trigger: CTGCCTGGCCTGCTGCAGTCACTGCAGGATTTGCAC...GAGGGAGCCCGCCTGCGGGTGAAGACTCTGCTGCAGATGGTAGGGGACGCAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000206479.2
ENSMUST00000206744.2
3UTR-3UTR CCA 90 bp AGCTGCGTCCCCTACCATCTGCAGCAGAGTCTTCACCCGCAGGCGGGCTCCCTCATCAGGGCACAGCTCTaGGCAAGGCAGACGATGCCC +
Preference number: 2 (lower is better)
Translates to: SCVPYHLQQSLHPQAGSLIRAQL*ARQTMP
Trigger: GGGCATCGTCTGCCTTGCCCAGAGCTGTGCCCTGAT...GAGGGAGCCCGCCTGCGGGTGAAGACTCTGCTGCAGATGGTAGGGGACGCAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206744.2
3UTR-3UTR TCA 90 bp ATGGAGAGCCGCACCCTGCCGGAAGCCCTGTTGCTGGTGGTTGGAACCCTGGTCGGAGCTGTCCAGCAGTaGGTGGGAACTGCTGAGGAG +
Preference number: 2 (lower is better)
Translates to: MESRTLPEALLLVVGTLVGAVQQ*VGTAEE
Trigger: CTCCTCAGCAGTTCCCACTCACTGCTGGACAGCTCC...GACCAGGGTTCCAACCACCAGCAACAGGGCTTCCGGCAGGGTGCGGCTCTCCAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000080932.8
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206728.2
ENSMUST00000206735.2
ENSMUST00000206744.2
3UTR-3UTR TCA 90 bp CAGGCGGGCTCCCTCTGTCCGCAGGAAGGTGAGAAAGTCGCCCCCTTGAACGAGGGAGCTGTCCAGCAGTaGGTGGGAACTGCTGAGGAG +
Preference number: 2 (lower is better)
Translates to: QAGSLCPQEGEKVAPLNEGAVQQ*VGTAEE
Trigger: CTCCTCAGCAGTTCCCACTCACTGCTGGACAGCTCC...CTCGTTCAAGGGGGCGACTTTCTCACCTTCCTGCGGACAGAGGGAGCCCGCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000206479.2
ENSMUST00000206744.2
3UTR-3UTR TCA 90 bp TGGAGAGCCGCACCCTGCCGGAAGCCCTGTTGCTGGTGGTTGGAACCCTGGTCTGGAGCTGTCCAGCAGTaGGTGGGAACTGCTGAGGAG +
Preference number: 2 (lower is better)
Translates to: WRAAPCRKPCCWWLEPWSGAVQQ*VGTAEE
Trigger: CTCCTCAGCAGTTCCCACTCACTGCTGGACAGCTCC...AGACCAGGGTTCCAACCACCAGCAACAGGGCTTCCGGCAGGGTGCGGCTCTCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000080932.8
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206728.2
ENSMUST00000206735.2
ENSMUST00000206744.2
3UTR-3UTR CCA 90 bp GCCTCCGGGTCTCACCGATGCCGCTTGCGGATACTGTGGAGCTCCTGGCAGATGATCAGGGCACAGCTCTaGGCAAGGCAGACGATGCCC +
Preference number: 2 (lower is better)
Translates to: ASGSHRCRLRILWSSWQMIRAQL*ARQTMP
Trigger: GGGCATCGTCTGCCTTGCCCAGAGCTGTGCCCTGAT...CATCTGCCAGGAGCTCCACAGTATCCGCAAGCGGCATCGGTGAGACCCGGAGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206744.2
3UTR-3UTR CCA 90 bp CGGGTCTCACCGATGCCGCTTGCGGATACTGTGGAGCTCCTGGCAGATGATGCTAGGCTGGCGAGTCCCTaGGCCGTGGGCTGCACTTAC +
Preference number: 2 (lower is better)
Translates to: RVSPMPLADTVELLADDARLASP*AVGCTY
Trigger: GTAAGTGCAGCCCACGGCCCAGGGACTCGCCAGCCT...AGCATCATCTGCCAGGAGCTCCACAGTATCCGCAAGCGGCATCGGTGAGACCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000205617.2
ENSMUST00000206479.2
3UTR CAA 90 bp TGGGCAGGAAGAAGGATGGAGAGCCGCACCCTGCCGGAAGCCCTGTaGCTGGTGGTTGGAACCCTGGTCTTGGAGCTGTCCAGCAGTGAG +
Preference number: 2 (lower is better)
Translates to: WAGRRMESRTLPEAL*LVVGTLVLELSSSE
Trigger: CTCACTGCTGGACAGCTCCAAGACCAGGGTTCCAACCACCAGCAACAGGGCTTCCGGCAGGGTGCGGCTCTCCATCCTTCTTCCTGCCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000080932.8
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206728.2
ENSMUST00000206735.2
ENSMUST00000206744.2
3UTR-3UTR TCA 90 bp CTGCTCCATGAGCCTGAAGACCGCATCAGGGCACAGCTCTGGGCAAGGCAGACGGGAGCTGTCCAGCAGTaGGTGGGAACTGCTGAGGAG +
Preference number: 2 (lower is better)
Translates to: LLHEPEDRIRAQLWARQTGAVQQ*VGTAEE
Trigger: CTCCTCAGCAGTTCCCACTCACTGCTGGACAGCTCC...CGTCTGCCTTGCCCAGAGCTGTGCCCTGATGCGGTCTTCAGGCTCATGGAGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206744.2
3UTR-3UTR TCA 90 bp AGAAGGATGGAGAGCCGCACCCTGCCGGAAGCCCTGTTGCTGGTGGTTGGAACCGCAGCCAGCTCACGGTaGATGGATGCCACATCGTCC +
Preference number: 2 (lower is better)
Translates to: RRMESRTLPEALLLVVGTAASSR*MDATSS
Trigger: GGACGATGTGGCATCCATTCACCGTGAGCTGGCTGC...GGTTCCAACCACCAGCAACAGGGCTTCCGGCAGGGTGCGGCTCTCCATCCTTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000206479.2
ENSMUST00000206744.2
3UTR-3UTR TCA 90 bp CAGCTGCGTCCCCTACCATCTGCAGCAGAGTCTTCACCCGCAGGCGGGCTCCCTTGGGAGGACAGCAGGTaGGTGATGAGCAGAGGTATG +
Preference number: 2 (lower is better)
Translates to: QLRPLPSAAESSPAGGLPWEDSR*VMSRGM
Trigger: CATACCTCTGCTCATCACTCACCTGCTGTCCTCCCA...AGGGAGCCCGCCTGCGGGTGAAGACTCTGCTGCAGATGGTAGGGGACGCAGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206744.2
3UTR-3UTR GCA 90 bp CTGCTCCATGAGCCTGAAGACCGCATCAGGGCACAGCTCTGGGCAAGGCAGACGTTCCCCCTTCCGATCTaGTCTCCCAGCACCAGGTCC +
Preference number: 2 (lower is better)
Translates to: LLHEPEDRIRAQLWARQTFPLPI*SPSTRS
Trigger: GGACCTGGTGCTGGGAGAGCAGATCGGAAGGGGGAA...CGTCTGCCTTGCCCAGAGCTGTGCCCTGATGCGGTCTTCAGGCTCATGGAGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000206744.2
3UTR-3UTR TCA 90 bp AGAGGAATTTGGGCAGGAAGAAGGATGGAGAGCCGCACCCTGCCGGAAGCCCTGGGAGCTGTCCAGCAGTaGGTGGGAACTGCTGAGGAG +
Preference number: 2 (lower is better)
Translates to: RGIWAGRRMESRTLPEALGAVQQ*VGTAEE
Trigger: CTCCTCAGCAGTTCCCACTCACTGCTGGACAGCTCC...CAGGGCTTCCGGCAGGGTGCGGCTCTCCATCCTTCTTCCTGCCCAAATTCCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000080932.8
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206728.2
ENSMUST00000206735.2
ENSMUST00000206744.2
3UTR-3UTR TCA 90 bp GGCTCCCTCTGTCCGCAGGAAGGTGAGAAAGTCGCCCCCTTGAACGAGCTCCATCCTTGGGCACCGCCCTaGACAGGACAACACCACTCT +
Preference number: 2 (lower is better)
Translates to: GSLCPQEGEKVAPLNELHPWAPP*TGQHHS
Trigger: AGAGTGGTGTTGTCCTGTTCAGGGCGGTGCCCAAGG...ATGGAGCTCGTTCAAGGGGGCGACTTTCTCACCTTCCTGCGGACAGAGGGAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000206479.2
ENSMUST00000206744.2
3UTR-3UTR GCA 90 bp GCCTCCGGGTCTCACCGATGCCGCTTGCGGATACTGTGGAGCTCCTGGCAGATGGTCTCGATCCTTGTCTaGCAGGTGAGAGGTGAGAGG +
Preference number: 2 (lower is better)
Translates to: ASGSHRCRLRILWSSWQMVSILV*QVRGER
Trigger: CCTCTCACCTCTCACCTGGCAGACAAGGATCGAGAC...CATCTGCCAGGAGCTCCACAGTATCCGCAAGCGGCATCGGTGAGACCCGGAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206744.2
3UTR-3UTR GCA 90 bp TGCACCTCCGGCACGAGCTGCAGTGGTGGAGGGATAGAGAACTTGGGGCGGAAGCCCGCCATCTCCTCGTaGAAATCCTGCAGTGACTGC +
Preference number: 2 (lower is better)
Translates to: CTSGTSCSGGGIENLGRKPAISS*KSCSDC
Trigger: GCAGTCACTGCAGGATTTGCACGAGGAGATGGCGGG...CTTCCGCCCCAAGTTCTCTATCCCTCCACCACTGCAGCTCGTGCCGGAGGTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000206479.2
ENSMUST00000206744.2
3UTR-3UTR CCA 90 bp GTCCTCGTGCTTCAGAACCCACTTGTCCTTGGGCACCGCCCTGAACAGGACAACACAGACGTCAGCGAGTaGCCAGGCGTGGAGGAGGTG +
Preference number: 2 (lower is better)
Translates to: VLVLQNPLVLGHRPEQDNTDVSE*PGVEEV
Trigger: CACCTCCTCCACGCCTGGCCACTCGCTGACGTCTGT...GTTGTCCTGTTCAGGGCGGTGCCCAAGGACAAGTGGGTTCTGAAGCACGAGGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000206479.2
ENSMUST00000206744.2
3UTR-3UTR CCA 90 bp GCCTCCGGGTCTCACCGATGCCGCTTGCGGATACTGTGGAGCTCCTGGCAGATGCACGAGCTGCAGTGGTaGAGGGATAGAGAACTTGGG +
Preference number: 2 (lower is better)
Translates to: ASGSHRCRLRILWSSWQMHELQW*RDRELG
Trigger: CCCAAGTTCTCTATCCCTCCACCACTGCAGCTCGTG...CATCTGCCAGGAGCTCCACAGTATCCGCAAGCGGCATCGGTGAGACCCGGAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206744.2
3UTR-3UTR CCA 90 bp TCCAGCAGTGAGTGGGAACTGCTGAGGAGGTACACGCTCGCCTCCGGGTCTCACGGCCTTGAGGTCAGGTaGGAGTGTCTCTCGGCAAGA +
Preference number: 2 (lower is better)
Translates to: SSSEWELLRRYTLASGSHGLEVR*ECLSAR
Trigger: TCTTGCCGAGAGACACTCCCACCTGACCTCAAGGCC...GTGAGACCCGGAGGCGAGCGTGTACCTCCTCAGCAGTTCCCACTCACTGCTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206744.2
3UTR CAA 90 bp CTGCTGAGGAGGTACACGCTCGCCTCCGGGTCTCACCGATGCCGCTaGCGGATACTGTGGAGCTCCTGGCAGATGATGCTGAAACTAGGT +
Preference number: 2 (lower is better)
Translates to: LLRRYTLASGSHRCR*RILWSSWQMMLKLG
Trigger: ACCTAGTTTCAGCATCATCTGCCAGGAGCTCCACAGTATCCGCAAGCGGCATCGGTGAGACCCGGAGGCGAGCGTGTACCTCCTCAGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206735.2
ENSMUST00000206744.2
3UTR CAA 90 bp TACGTCTTTCTCAGGTGCTGCCGCTCCCGGATCAGCACGCTCAGTTaGCTCAAGGGCCCCGAGTTCAGATCTTCTGCATGCTGCCGCAGC +
Preference number: 2 (lower is better)
Translates to: YVFLRCCRSRISTLS*LKGPEFRSSACCRS
Trigger: GCTGCGGCAGCATGCAGAAGATCTGAACTCGGGGCCCTTGAGCAAACTGAGCGTGCTGATCCGGGAGCGGCAGCACCTGAGAAAGACGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000206539.2
3UTR-3UTR TCA 90 bp GTCCTCGTGCTTCAGAACCCACTTGTCCTTGGGCACCGCCCTGAACAGGACAACCCTTGGGCACCGCCCTaGACAGGACAACACCACTCT +
Preference number: 2 (lower is better)
Translates to: VLVLQNPLVLGHRPEQDNPWAPP*TGQHHS
Trigger: AGAGTGGTGTTGTCCTGTTCAGGGCGGTGCCCAAGG...GTTGTCCTGTTCAGGGCGGTGCCCAAGGACAAGTGGGTTCTGAAGCACGAGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206744.2
3UTR-3UTR GCA 90 bp TGCTGCAGCTGCTGCCACTGCTCGTTGTACGTCTTTCTCAGGTGCTGCCGCTCCCGAGTTCAGATCTTCTaGATGCTGCCGCAGCACCCG +
Preference number: 2 (lower is better)
Translates to: CCSCCHCSLYVFLRCCRSRVQIF*MLPQHP
Trigger: CGGGTGCTGCGGCAGCATGCAGAAGATCTGAACTCG...GGAGCGGCAGCACCTGAGAAAGACGTACAACGAGCAGTGGCAGCAGCTGCAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206539.2
3UTR-3UTR CCA 90 bp CCCTGCCGGAAGCCCTGTTGCTGGTGGTTGGAACCCTGGTCTTGGAGCTGTCCACTGTCCAGCAGTGAGTaGGAACTGCTGAGGAGGTAC +
Preference number: 2 (lower is better)
Translates to: PCRKPCCWWLEPWSWSCPLSSSE*ELLRRY
Trigger: GTACCTCCTCAGCAGTTCCCACTCACTGCTGGACAG...TGGACAGCTCCAAGACCAGGGTTCCAACCACCAGCAACAGGGCTTCCGGCAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000080932.8
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206728.2
ENSMUST00000206735.2
ENSMUST00000206744.2
3UTR-3UTR CCA 90 bp GCTGCTCATAGAGAGGCTTCTGCACCTCCGGCACGAGCTGCAGTGGTGGAGGGACTGTCCAGCAGTGAGTaGGAACTGCTGAGGAGGTAC +
Preference number: 2 (lower is better)
Translates to: AAHREASAPPARAAVVEGLSSSE*ELLRRY
Trigger: GTACCTCCTCAGCAGTTCCCACTCACTGCTGGACAG...TCCCTCCACCACTGCAGCTCGTGCCGGAGGTGCAGAAGCCTCTCTATGAGCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206744.2
3UTR-3UTR CCA 90 bp GATGGAGAGCCGCACCCTGCCGGAAGCCCTGTTGCTGGTGGTTGGAACCCTGGTTTGGAACCCTGGTCTTaGAGCTGTCCAGCAGTGAGT +
Preference number: 2 (lower is better)
Translates to: DGEPHPAGSPVAGGWNPGLEPWS*SCPAVS
Trigger: ACTCACTGCTGGACAGCTCCAAGACCAGGGTTCCAA...ACCAGGGTTCCAACCACCAGCAACAGGGCTTCCGGCAGGGTGCGGCTCTCCATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000080932.8
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206728.2
ENSMUST00000206735.2
ENSMUST00000206744.2
3UTR-3UTR CCA 90 bp CCGCACCCTGCCGGAAGCCCTGTTGCTGGTGGTTGGAACCCTGGTCTTGGAGCTTTGGAACCCTGGTCTTaGAGCTGTCCAGCAGTGAGT +
Preference number: 2 (lower is better)
Translates to: PHPAGSPVAGGWNPGLGALEPWS*SCPAVS
Trigger: ACTCACTGCTGGACAGCTCCAAGACCAGGGTTCCAA...AGCTCCAAGACCAGGGTTCCAACCACCAGCAACAGGGCTTCCGGCAGGGTGCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000080932.8
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206728.2
ENSMUST00000206735.2
ENSMUST00000206744.2
3UTR-3UTR CCA 90 bp GCTGCTCATAGAGAGGCTTCTGCACCTCCGGCACGAGCTGCAGTGGTGGAGGGAAAGCCCTGTTGCTGGTaGTTGGAACCCTGGTCTTGG +
Preference number: 2 (lower is better)
Translates to: AAHREASAPPARAAVVEGKPCCW*LEPWSW
Trigger: CCAAGACCAGGGTTCCAACCACCAGCAACAGGGCTT...TCCCTCCACCACTGCAGCTCGTGCCGGAGGTGCAGAAGCCTCTCTATGAGCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206744.2
3UTR-3UTR CCA 90 bp TGCACCTCCGGCACGAGCTGCAGTGGTGGAGGGATAGAGAACTTGGGGCGGAAGCCAGCTCACGGTGAATaGATGCCACATCGTCCTGCA +
Preference number: 2 (lower is better)
Translates to: CTSGTSCSGGGIENLGRKPAHGE*MPHRPA
Trigger: TGCAGGACGATGTGGCATCCATTCACCGTGAGCTGG...CTTCCGCCCCAAGTTCTCTATCCCTCCACCACTGCAGCTCGTGCCGGAGGTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000206479.2
ENSMUST00000206744.2
3UTR CAA 90 bp TCAGGTGGGAGTGTCTCTCGGCAAGACTTCACAGCCACCGGGGTATaGTCTGCACGAAGGCGGCCACTAAACACCTCTCCGAAGTTCCCC +
Preference number: 2 (lower is better)
Translates to: SGGSVSRQDFTATGV*SARRRPLNTSPKFP
Trigger: GGGGAACTTCGGAGAGGTGTTTAGTGGCCGCCTTCGTGCAGACAATACCCCGGTGGCTGTGAAGTCTTGCCGAGAGACACTCCCACCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206744.2
3UTR-3UTR CCA 90 bp GGCTCCCTCTGTCCGCAGGAAGGTGAGAAAGTCGCCCCCTTGAACGAGCTCCATCTGTCCAGCAGTGAGTaGGAACTGCTGAGGAGGTAC +
Preference number: 2 (lower is better)
Translates to: GSLCPQEGEKVAPLNELHLSSSE*ELLRRY
Trigger: GTACCTCCTCAGCAGTTCCCACTCACTGCTGGACAG...ATGGAGCTCGTTCAAGGGGGCGACTTTCTCACCTTCCTGCGGACAGAGGGAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000206479.2
ENSMUST00000206744.2
3UTR-3UTR CCA 90 bp GCTGCTCATAGAGAGGCTTCTGCACCTCCGGCACGAGCTGCAGTGGTGGAGGGATTGGAACCCTGGTCTTaGAGCTGTCCAGCAGTGAGT +
Preference number: 2 (lower is better)
Translates to: AAHREASAPPARAAVVEGLEPWS*SCPAVS
Trigger: ACTCACTGCTGGACAGCTCCAAGACCAGGGTTCCAA...TCCCTCCACCACTGCAGCTCGTGCCGGAGGTGCAGAAGCCTCTCTATGAGCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206744.2
3UTR-3UTR CCA 90 bp GGCTCTCCCGAACCAGGAAGTCCCCGGAGTGTGTTAGCAGCTCAGCTACCTCTGTGGTGGTTGGAACCCTaGTCTTGGAGCTGTCCAGCA +
Preference number: 2 (lower is better)
Translates to: GSPEPGSPRSVLAAQLPLWWLEP*SWSCPA
Trigger: TGCTGGACAGCTCCAAGACCAGGGTTCCAACCACCA...CAGAGGTAGCTGAGCTGCTAACACACTCCGGGGACTTCCTGGTTCGGGAGAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206744.2
3UTR-3UTR CCA 90 bp CGGGTCTCACCGATGCCGCTTGCGGATACTGTGGAGCTCCTGGCAGATGATGCTTGGTGGTTGGAACCCTaGTCTTGGAGCTGTCCAGCA +
Preference number: 2 (lower is better)
Translates to: RVSPMPLADTVELLADDAWWLEP*SWSCPA
Trigger: TGCTGGACAGCTCCAAGACCAGGGTTCCAACCACCA...AGCATCATCTGCCAGGAGCTCCACAGTATCCGCAAGCGGCATCGGTGAGACCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206735.2
ENSMUST00000206744.2
3UTR-3UTR CCA 90 bp CGGGTCTCACCGATGCCGCTTGCGGATACTGTGGAGCTCCTGGCAGATGATGCTAAGCCCTGTTGCTGGTaGTTGGAACCCTGGTCTTGG +
Preference number: 2 (lower is better)
Translates to: RVSPMPLADTVELLADDAKPCCW*LEPWSW
Trigger: CCAAGACCAGGGTTCCAACCACCAGCAACAGGGCTT...AGCATCATCTGCCAGGAGCTCCACAGTATCCGCAAGCGGCATCGGTGAGACCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206735.2
ENSMUST00000206744.2
3UTR-3UTR CCA 90 bp TCTCACCGATGCCGCTTGCGGATACTGTGGAGCTCCTGGCAGATGATGCTGAAAGGCAGCATGAACCGGTaGTGGTGGTGGTGGTGCAGC +
Preference number: 2 (lower is better)
Translates to: SHRCRLRILWSSWQMMLKGSMNR*WWWWCS
Trigger: GCTGCACCACCACCACCACCACCGGTTCATGCTGCC...TTTCAGCATCATCTGCCAGGAGCTCCACAGTATCCGCAAGCGGCATCGGTGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000206479.2
ENSMUST00000206744.2
3UTR-3UTR CCA 90 bp GTCCTCGTGCTTCAGAACCCACTTGTCCTTGGGCACCGCCCTGAACAGGACAACGTGGCACATCAGGGGTaGATCTGTGGGTGGACAAGG +
Preference number: 2 (lower is better)
Translates to: VLVLQNPLVLGHRPEQDNVAHQG*ICGWTR
Trigger: CCTTGTCCACCCACAGATCCACCCCTGATGTGCCAC...GTTGTCCTGTTCAGGGCGGTGCCCAAGGACAAGTGGGTTCTGAAGCACGAGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000206479.2
3UTR-3UTR TCA 90 bp GTGCAGACCCCGATGAGACGCACAATGTTGGGGTGGTTGTACTGTTTCAGGATCTCTCGCTCCTGCTCCTaGGGCCAGGGACAGACGTCA +
Preference number: 2 (lower is better)
Translates to: VQTPMRRTMLGWLYCFRISRSCS*GQGQTS
Trigger: TGACGTCTGTCCCTGGCCTCAGGAGCAGGAGCGAGA...GATCCTGAAACAGTACAACCACCCCAACATTGTGCGTCTCATCGGGGTCTGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000206479.2
ENSMUST00000206744.2
3UTR-3UTR TCA 90 bp TCTCACCGATGCCGCTTGCGGATACTGTGGAGCTCCTGGCAGATGATGCTGAAATTGTCTGAGGCCCGCTaGGGCGGCATAGATCCCATC +
Preference number: 2 (lower is better)
Translates to: SHRCRLRILWSSWQMMLKLSEAR*GGIDPI
Trigger: GATGGGATCTATGCCGCCTCAGCGGGCCTCAGACAA...TTTCAGCATCATCTGCCAGGAGCTCCACAGTATCCGCAAGCGGCATCGGTGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206744.2
3UTR-3UTR GCA 90 bp ATCGGCTGTTTCTGTGTGCAGACCCCGATGAGACGCACAATGTTGGGGTGGTTGACCTCCGGCACGAGCTaGAGTGGTGGAGGGATAGAG +
Preference number: 2 (lower is better)
Translates to: IGCFCVQTPMRRTMLGWLTSGTS*SGGGIE
Trigger: CTCTATCCCTCCACCACTGCAGCTCGTGCCGGAGGT...CAACCACCCCAACATTGTGCGTCTCATCGGGGTCTGCACACAGAAACAGCCGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206744.2
3UTR-3UTR GCA 90 bp AGTGTCTCTCGGCAAGACTTCACAGCCACCGGGGTATTGTCTGCACGAAGGCGGGTACATACTCCTGCTTaGCCTGGCTCTCCCGAACCA +
Preference number: 2 (lower is better)
Translates to: SVSRQDFTATGVLSARRRVHTPA*PGSPEP
Trigger: TGGTTCGGGAGAGCCAGGGCAAGCAGGAGTATGTAC...CCGCCTTCGTGCAGACAATACCCCGGTGGCTGTGAAGTCTTGCCGAGAGACACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206744.2
3UTR-3UTR GCA 90 bp TCTCACCGATGCCGCTTGCGGATACTGTGGAGCTCCTGGCAGATGATGCTGAAAGGGCAAGGCAGACGATaGCCTAGGAGGACAGGTGCA +
Preference number: 2 (lower is better)
Translates to: SHRCRLRILWSSWQMMLKGQGRR*PRRTGA
Trigger: TGCACCTGTCCTCCTAGGGCATCGTCTGCCTTGCCC...TTTCAGCATCATCTGCCAGGAGCTCCACAGTATCCGCAAGCGGCATCGGTGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206479.2
3UTR-3UTR CCA 90 bp TGCCTAAGAGAGGAATTTGGGCAGGAAGAAGGATGGAGAGCCGCACCCTGCCGGAAGCCCTGTTGCTGGTaGTTGGAACCCTGGTCTTGG +
Preference number: 2 (lower is better)
Translates to: CLREEFGQEEGWRAAPCRKPCCW*LEPWSW
Trigger: CCAAGACCAGGGTTCCAACCACCAGCAACAGGGCTT...CCGGCAGGGTGCGGCTCTCCATCCTTCTTCCTGCCCAAATTCCTCTCTTAGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000080932.8
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206728.2
ENSMUST00000206735.2
ENSMUST00000206744.2
3UTR-3UTR CCA 90 bp AGCTGCGTCCCCTACCATCTGCAGCAGAGTCTTCACCCGCAGGCGGGCTCCCTCATACTGTGGAGCTCCTaGCAGATGATGCTGAAACTA +
Preference number: 2 (lower is better)
Translates to: SCVPYHLQQSLHPQAGSLILWSS*QMMLKL
Trigger: TAGTTTCAGCATCATCTGCCAGGAGCTCCACAGTAT...GAGGGAGCCCGCCTGCGGGTGAAGACTCTGCTGCAGATGGTAGGGGACGCAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206744.2
3UTR-3UTR TCA 90 bp ACTGTGGAGCTCCTGGCAGATGATGCTGAAACTAGGTCTCTGCCCAGGCTCATACCTTGGGCACCGCCCTaGACAGGACAACACCACTCT +
Preference number: 2 (lower is better)
Translates to: TVELLADDAETRSLPRLIPWAPP*TGQHHS
Trigger: AGAGTGGTGTTGTCCTGTTCAGGGCGGTGCCCAAGG...TATGAGCCTGGGCAGAGACCTAGTTTCAGCATCATCTGCCAGGAGCTCCACAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206744.2
3UTR-3UTR TCA 90 bp ACTGTGGAGCTCCTGGCAGATGATGCTGAAACTAGGTCTCTGCCCAGGCTCATAGTGAGGCCCCCAGGCTaGAGGTCTCCCACAGCAAAA +
Preference number: 2 (lower is better)
Translates to: TVELLADDAETRSLPRLIVRPPG*RSPTAK
Trigger: TTTTGCTGTGGGAGACCTTCAGCCTGGGGGCCTCAC...TATGAGCCTGGGCAGAGACCTAGTTTCAGCATCATCTGCCAGGAGCTCCACAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206744.2
3UTR-3UTR TCA 90 bp AGCTGCGTCCCCTACCATCTGCAGCAGAGTCTTCACCCGCAGGCGGGCTCCCTCACCTCCTCTAAGAAGTaGCATGGGAAATCCAGAAAT +
Preference number: 2 (lower is better)
Translates to: SCVPYHLQQSLHPQAGSLTSSKK*HGKSRN
Trigger: ATTTCTGGATTTCCCATGTCACTTCTTAGAGGAGGT...GAGGGAGCCCGCCTGCGGGTGAAGACTCTGCTGCAGATGGTAGGGGACGCAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000205617.2
ENSMUST00000206479.2
3UTR-3UTR CCA 90 bp GGCTCCCTCTGTCCGCAGGAAGGTGAGAAAGTCGCCCCCTTGAACGAGCTCCATAAAAGTGACACAAGGTaGCACATCAGGGGTGGATCC +
Preference number: 2 (lower is better)
Translates to: GSLCPQEGEKVAPLNELHKSDTR*HIRGGS
Trigger: GGATCCACCCCTGATGTGCCACCTTGTGTCACTTTT...ATGGAGCTCGTTCAAGGGGGCGACTTTCTCACCTTCCTGCGGACAGAGGGAGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000206744.2
3UTR-3UTR CCA 90 bp GTGCTTCAGAACCCACTTGTCCTTGGGCACCGCCCTGAACAGGACAACACCACTCACGAGCTGCAGTGGTaGAGGGATAGAGAACTTGGG +
Preference number: 2 (lower is better)
Translates to: VLQNPLVLGHRPEQDNTTHELQW*RDRELG
Trigger: CCCAAGTTCTCTATCCCTCCACCACTGCAGCTCGTG...AGTGGTGTTGTCCTGTTCAGGGCGGTGCCCAAGGACAAGTGGGTTCTGAAGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206744.2
3UTR-3UTR CCA 90 bp TCTGCACGAAGGCGGCCACTAAACACCTCTCCGAAGTTCCCCTGCAATAGTCCTTACTCCTGCTTGCCCTaGCTCTCCCGAACCAGGAAG +
Preference number: 2 (lower is better)
Translates to: SARRRPLNTSPKFPCNSPYSCLP*LSRTRK
Trigger: CTTCCTGGTTCGGGAGAGCCAGGGCAAGCAGGAGTA...AGGACTATTGCAGGGGAACTTCGGAGAGGTGTTTAGTGGCCGCCTTCGTGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000205617.2
ENSMUST00000206479.2
3UTR-3UTR CCA 90 bp GGGGTATTGTCTGCACGAAGGCGGCCACTAAACACCTCTCCGAAGTTCCCCTGCATGAAATGTCGGGGCTaGCCATCCCACATCACAGAC +
Preference number: 2 (lower is better)
Translates to: GVLSARRRPLNTSPKFPCMKCRG*PSHITD
Trigger: GTCTGTGATGTGGGATGGCCAGCCCCGACATTTCAT...GCAGGGGAACTTCGGAGAGGTGTTTAGTGGCCGCCTTCGTGCAGACAATACCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000205617.2
ENSMUST00000206479.2
3UTR-3UTR CCA 90 bp CACCGATGCCGCTTGCGGATACTGTGGAGCTCCTGGCAGATGATGCTGAAACTAGGCCTTGAGGTCAGGTaGGAGTGTCTCTCGGCAAGA +
Preference number: 2 (lower is better)
Translates to: HRCRLRILWSSWQMMLKLGLEVR*ECLSAR
Trigger: TCTTGCCGAGAGACACTCCCACCTGACCTCAAGGCC...TAGTTTCAGCATCATCTGCCAGGAGCTCCACAGTATCCGCAAGCGGCATCGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206744.2
3UTR CAA 90 bp CTGGGCCTGAAGCTTGTCCTGGCTGCACAGTGCTATCTGCAACCCTaGTATTGCCTCTTGCAGCATCTGCCTCTTGCTCAGAAGCTGCAC +
Preference number: 2 (lower is better)
Translates to: LGLKLVLAAQCYLQP*YCLLQHLPLAQKLH
Trigger: GTGCAGCTTCTGAGCAAGAGGCAGATGCTGCAAGAGGCAATACAAGGGTTGCAGATAGCACTGTGCAGCCAGGACAAGCTTCAGGCCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206744.2
3UTR-3UTR TCA 90 bp TGGATACAACACTTGCTTTCCAAGTATTCCATGCCAGCAGCTGCGTCCCCTACCGCAGCCAGCTCACGGTaGATGGATGCCACATCGTCC +
Preference number: 2 (lower is better)
Translates to: WIQHLLSKYSMPAAASPTAASSR*MDATSS
Trigger: GGACGATGTGGCATCCATTCACCGTGAGCTGGCTGC...GGTAGGGGACGCAGCTGCTGGCATGGAATACTTGGAAAGCAAGTGTTGTATCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000206479.2
ENSMUST00000206744.2
3UTR-3UTR TCA 90 bp ACGAAGCTGGTGAGGAAAGTCACAGGTAGAGCCCAGAAGGCTGGCGAGTCCCTGGCGACTCATCAAAAGTaGCACAAGGTGGCACATCAG +
Preference number: 2 (lower is better)
Translates to: TKLVRKVTGRAQKAGESLATHQK*HKVAHQ
Trigger: CTGATGTGCCACCTTGTGTCACTTTTGATGAGTCGC...CAGGGACTCGCCAGCCTTCTGGGCTCTACCTGTGACTTTCCTCACCAGCTTCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000206479.2
3UTR-3UTR GCA 90 bp TCCCTGTGGATACAACACTTGCTTTCCAAGTATTCCATGCCAGCAGCTGCGTCCGTCAACTCGTTCAGCTaGAGCTCCCCTGGCTCCAGC +
Preference number: 2 (lower is better)
Translates to: SLWIQHLLSKYSMPAAASVNSFS*SSPGSS
Trigger: GCTGGAGCCAGGGGAGCTGCAGCTGAACGAGTTGAC...GGACGCAGCTGCTGGCATGGAATACTTGGAAAGCAAGTGTTGTATCCACAGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000206479.2
ENSMUST00000206744.2
3UTR-3UTR GCA 90 bp CCTGGGTGCTATCTCGTACCAGGGTCCGGTACTGAGTCTTCAGCTTCTCAATGTAGCTCCTGCTGCAGCTaGTGCCACTGCTCGTTGTAC +
Preference number: 2 (lower is better)
Translates to: PGCYLVPGSGTESSASQCSSCCS*CHCSLY
Trigger: GTACAACGAGCAGTGGCAGCAGCTGCAGCAGGAGCT...ACATTGAGAAGCTGAAGACTCAGTACCGGACCCTGGTACGAGATAGCACCCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206539.2
3UTR-3UTR CCA 90 bp TGTCCGCAGGAAGGTGAGAAAGTCGCCCCCTTGAACGAGCTCCATGACGATGTATGGTGGTTGGAACCCTaGTCTTGGAGCTGTCCAGCA +
Preference number: 2 (lower is better)
Translates to: CPQEGEKVAPLNELHDDVWWLEP*SWSCPA
Trigger: TGCTGGACAGCTCCAAGACCAGGGTTCCAACCACCA...TACATCGTCATGGAGCTCGTTCAAGGGGGCGACTTTCTCACCTTCCTGCGGACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000206479.2
ENSMUST00000206744.2
3UTR-3UTR CCA 90 bp TCTGCACGAAGGCGGCCACTAAACACCTCTCCGAAGTTCCCCTGCAATAGTCCTCCTGTTGCTGGTGGTTaGAACCCTGGTCTTGGAGCT +
Preference number: 2 (lower is better)
Translates to: SARRRPLNTSPKFPCNSPPVAGG*NPGLGA
Trigger: AGCTCCAAGACCAGGGTTCCAACCACCAGCAACAGG...AGGACTATTGCAGGGGAACTTCGGAGAGGTGTTTAGTGGCCGCCTTCGTGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000205617.2
ENSMUST00000206479.2
3UTR-3UTR CCA 90 bp GACCCCGATGAGACGCACAATGTTGGGGTGGTTGTACTGTTTCAGGATCCTTGCAGCATGAACCGGTGGTaGTGGTGGTGGTGCAGCTGT +
Preference number: 2 (lower is better)
Translates to: DPDETHNVGVVVLFQDPCSMNRW*WWWCSC
Trigger: ACAGCTGCACCACCACCACCACCACCGGTTCATGCT...GCAAGGATCCTGAAACAGTACAACCACCCCAACATTGTGCGTCTCATCGGGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000206744.2
3UTR CAA 90 bp ACAAGGGACCTCGAGCCTCACTCATTTGATGACCCACCTTGCTTCTaGCAGAAACTTGGCCTTGAGGTCAGGTGGGAGTGTCTCTCGGCA +
Preference number: 2 (lower is better)
Translates to: TRDLEPHSFDDPPCF*QKLGLEVRWECLSA
Trigger: TGCCGAGAGACACTCCCACCTGACCTCAAGGCCAAGTTTCTGCAAGAAGCAAGGTGGGTCATCAAATGAGTGAGGCTCGAGGTCCCTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206479.2
3UTR-3UTR TCA 90 bp CTATCTGCAACCCTTGTATTGCCTCTTGCAGCATCTGCCTCTTGCTCAGAAGCTTCCTTGTCTGCCAGGTaGGAGGTGAGAGGGAGGGAG +
Preference number: 2 (lower is better)
Translates to: LSATLVLPLAASASCSEASLSAR*EVRGRE
Trigger: CTCCCTCCCTCTCACCTCTCACCTGGCAGACAAGGA...AGCTTCTGAGCAAGAGGCAGATGCTGCAAGAGGCAATACAAGGGTTGCAGATAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206744.2
3UTR-3UTR CCA 90 bp GACCCCGATGAGACGCACAATGTTGGGGTGGTTGTACTGTTTCAGGATCCTTGCCTGTCCAGCAGTGAGTaGGAACTGCTGAGGAGGTAC +
Preference number: 2 (lower is better)
Translates to: DPDETHNVGVVVLFQDPCLSSSE*ELLRRY
Trigger: GTACCTCCTCAGCAGTTCCCACTCACTGCTGGACAG...GCAAGGATCCTGAAACAGTACAACCACCCCAACATTGTGCGTCTCATCGGGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000205617.2
ENSMUST00000206744.2
3UTR-3UTR CCA 90 bp ATCGGCTGTTTCTGTGTGCAGACCCCGATGAGACGCACAATGTTGGGGTGGTTGTTGGAACCCTGGTCTTaGAGCTGTCCAGCAGTGAGT +
Preference number: 2 (lower is better)
Translates to: IGCFCVQTPMRRTMLGWLLEPWS*SCPAVS
Trigger: ACTCACTGCTGGACAGCTCCAAGACCAGGGTTCCAA...CAACCACCCCAACATTGTGCGTCTCATCGGGGTCTGCACACAGAAACAGCCGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206744.2
3UTR-3UTR CCA 90 bp GACCCCGATGAGACGCACAATGTTGGGGTGGTTGTACTGTTTCAGGATCCTTGCCCTGTTGCTGGTGGTTaGAACCCTGGTCTTGGAGCT +
Preference number: 2 (lower is better)
Translates to: DPDETHNVGVVVLFQDPCPVAGG*NPGLGA
Trigger: AGCTCCAAGACCAGGGTTCCAACCACCAGCAACAGG...GCAAGGATCCTGAAACAGTACAACCACCCCAACATTGTGCGTCTCATCGGGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000205617.2
ENSMUST00000206744.2
3UTR CAA 90 bp CTCACTCATTTGATGACCCACCTTGCTTCTTGCAGAAACTTGGCCTaGAGGTCAGGTGGGAGTGTCTCTCGGCAAGACTTCACAGCCACC +
Preference number: 2 (lower is better)
Translates to: LTHLMTHLASCRNLA*RSGGSVSRQDFTAT
Trigger: GGTGGCTGTGAAGTCTTGCCGAGAGACACTCCCACCTGACCTCAAGGCCAAGTTTCTGCAAGAAGCAAGGTGGGTCATCAAATGAGTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206479.2
3UTR CAA 90 bp AAGGGATCAGATTCCTTCCGATTCACTGCCCTTAAGGAACCACTCTaGGGGGCTGGAGAGATGGCTCAGTGGTTAAGAGCACCGACTGCT +
Preference number: 2 (lower is better)
Translates to: KGSDSFRFTALKEPL*GAGEMAQWLRAPTA
Trigger: AGCAGTCGGTGCTCTTAACCACTGAGCCATCTCTCCAGCCCCCAAGAGTGGTTCCTTAAGGGCAGTGAATCGGAAGGAATCTGATCCCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000206479.2
3UTR-3UTR GCA 90 bp ACCTCGAGCCTCACTCATTTGATGACCCACCTTGCTTCTTGCAGAAACTTGGCCGCCTCTTGCAGCATCTaGCTCTTGCTCAGAAGCTGC +
Preference number: 2 (lower is better)
Translates to: TSSLTHLMTHLASCRNLAASCSI*LLLRSC
Trigger: GCAGCTTCTGAGCAAGAGGCAGATGCTGCAAGAGGC...GGCCAAGTTTCTGCAAGAAGCAAGGTGGGTCATCAAATGAGTGAGGCTCGAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206479.2
3UTR CAA 90 bp TGGTTGTACTGTTTCAGGATCCTTGCTTCTTGCAGAAACTTGGCCTaGAGGTCAGGTGGGAGTGTCTCTCGGCAAGACTTCACAGCCACC +
Preference number: 2 (lower is better)
Translates to: WLYCFRILASCRNLA*RSGGSVSRQDFTAT
Trigger: GGTGGCTGTGAAGTCTTGCCGAGAGACACTCCCACCTGACCTCAAGGCCAAGTTTCTGCAAGAAGCAAGGATCCTGAAACAGTACAACCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000205617.2
ENSMUST00000206744.2
3UTR CAA 90 bp TCGAGCCTCACTCATTTGATGACCCACCTTGCTTCTTGCAGAAACTaGGCCTTGAGGTCAGGTGGGAGTGTCTCTCGGCAAGACTTCACA +
Preference number: 2 (lower is better)
Translates to: SSLTHLMTHLASCRN*ALRSGGSVSRQDFT
Trigger: TGTGAAGTCTTGCCGAGAGACACTCCCACCTGACCTCAAGGCCAAGTTTCTGCAAGAAGCAAGGTGGGTCATCAAATGAGTGAGGCTCGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206479.2
3UTR CAA 90 bp ACACAGAGGACACCTCTCACACAAGGGACCTCGAGCCTCACTCATTaGATGACCCACCTTGCTTCTTGCAGAAACTTGGCCTTGAGGTCA +
Preference number: 2 (lower is better)
Translates to: TQRTPLTQGTSSLTH*MTHLASCRNLALRS
Trigger: TGACCTCAAGGCCAAGTTTCTGCAAGAAGCAAGGTGGGTCATCAAATGAGTGAGGCTCGAGGTCCCTTGTGTGAGAGGTGTCCTCTGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206479.2
3UTR-3UTR TCA 90 bp CAGTGGTGGAGGGATAGAGAACTTGGGGCGGAAGATTCCGGAGAAGTGGCTTTTGCGACTCATCAAAAGTaGCACAAGGTGGCACATCAG +
Preference number: 2 (lower is better)
Translates to: QWWRDRELGAEDSGEVAFATHQK*HKVAHQ
Trigger: CTGATGTGCCACCTTGTGTCACTTTTGATGAGTCGC...AAAAGCCACTTCTCCGGAATCTTCCGCCCCAAGTTCTCTATCCCTCCACCACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000206479.2
ENSMUST00000206744.2
3UTR-3UTR TCA 90 bp TCTCACCGATGCCGCTTGCGGATACTGTGGAGCTCCTGGCAGATGATGCTGAAAGTTGGGAAAGCATTCTaGTTGGAAAGTGGCTGGCAT +
Preference number: 2 (lower is better)
Translates to: SHRCRLRILWSSWQMMLKVGKAF*LESGWH
Trigger: ATGCCAGCCACTTTCCAATCAGAATGCTTTCCCAAC...TTTCAGCATCATCTGCCAGGAGCTCCACAGTATCCGCAAGCGGCATCGGTGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000205617.2
ENSMUST00000206479.2
3UTR-3UTR CCA 90 bp CGCACAATGTTGGGGTGGTTGTACTGTTTCAGGATCCTTGCTTCTTGCAGAAACCAGGCGTGGAGGAGGTaGAATGGCGGTCATCCTGAA +
Preference number: 2 (lower is better)
Translates to: RTMLGWLYCFRILASCRNQAWRR*NGGHPE
Trigger: TTCAGGATGACCGCCATTCCACCTCCTCCACGCCTG...GTTTCTGCAAGAAGCAAGGATCCTGAAACAGTACAACCACCCCAACATTGTGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000206744.2
3UTR CAA 90 bp TGTTTCTGTGTGCAGACCCCGATGAGACGCACAATGTTGGGGTGGTaGTACTGTTTCAGGATCCTTGCTTCTTGCAGAAACTTGGCCTTG +
Preference number: 2 (lower is better)
Translates to: CFCVQTPMRRTMLGW*YCFRILASCRNLAL
Trigger: CAAGGCCAAGTTTCTGCAAGAAGCAAGGATCCTGAAACAGTACAACCACCCCAACATTGTGCGTCTCATCGGGGTCTGCACACAGAAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000205617.2
ENSMUST00000206744.2
3UTR-3UTR CCA 90 bp TCCCTGTGGATACAACACTTGCTTTCCAAGTATTCCATGCCAGCAGCTGCGTCCAAAAGTGACACAAGGTaGCACATCAGGGGTGGATCT +
Preference number: 2 (lower is better)
Translates to: SLWIQHLLSKYSMPAAASKSDTR*HIRGGS
Trigger: AGATCCACCCCTGATGTGCCACCTTGTGTCACTTTT...GGACGCAGCTGCTGGCATGGAATACTTGGAAAGCAAGTGTTGTATCCACAGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000206479.2
3UTR-3UTR CCA 90 bp AGAGAGGAATTTGGGCAGGAAGAAGGATGGAGAGCCGCACCCTGCCGGAAGCCCATTCTGATTGGAAAGTaGCTGGCATTTTACATTAAC +
Preference number: 2 (lower is better)
Translates to: REEFGQEEGWRAAPCRKPILIGK*LAFYIN
Trigger: GTTAATGTAAAATGCCAGCCACTTTCCAATCAGAAT...GGGCTTCCGGCAGGGTGCGGCTCTCCATCCTTCTTCCTGCCCAAATTCCTCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000205617.2
ENSMUST00000206479.2
3UTR-3UTR GCA 90 bp CCGATCTGCTCTCCCAGCACCAGGTCCTCGTGCTTCAGAACCCACTTGTCCTTGCTTGTTTTATTTTTCTaGCTAAGAGAGGAATTTGGG +
Preference number: 2 (lower is better)
Translates to: PICSPSTRSSCFRTHLSLLVLFF*LREEFG
Trigger: CCCAAATTCCTCTCTTAGGCAGAAAAATAAAACAAG...CAAGGACAAGTGGGTTCTGAAGCACGAGGACCTGGTGCTGGGAGAGCAGATCGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206744.2
3UTR-3UTR GCA 90 bp CTGGTGGTTGGAACCCTGGTCTTGGAGCTGTCCAGCAGTGAGTGGGAACTGCTGCTTGTTTTATTTTTCTaGCTAAGAGAGGAATTTGGG +
Preference number: 2 (lower is better)
Translates to: LVVGTLVLELSSSEWELLLVLFF*LREEFG
Trigger: CCCAAATTCCTCTCTTAGGCAGAAAAATAAAACAAG...CAGCAGTTCCCACTCACTGCTGGACAGCTCCAAGACCAGGGTTCCAACCACCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080932.8
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206735.2
ENSMUST00000206744.2
3UTR-3UTR CCA 90 bp ACTTGTTTTATTTTTCTGCCTAAGAGAGGAATTTGGGCAGGAAGAAGGATGGAGCTGTCCAGCAGTGAGTaGGAACTGCTGAGGAGGTAC +
Preference number: 2 (lower is better)
Translates to: TCFIFLPKRGIWAGRRMELSSSE*ELLRRY
Trigger: GTACCTCCTCAGCAGTTCCCACTCACTGCTGGACAG...CTCCATCCTTCTTCCTGCCCAAATTCCTCTCTTAGGCAGAAAAATAAAACAAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080932.8
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206735.2
ENSMUST00000206744.2
3UTR-3UTR CCA 90 bp AATGTTGGGGTGGTTGTACTGTTTCAGGATCCTTGCTTCTTGCAGAAACTTGGCGGACATACTTGTCTTTaGCCTTGTCTCGATCCTTGT +
Preference number: 2 (lower is better)
Translates to: NVGVVVLFQDPCFLQKLGGHTCL*PCLDPC
Trigger: ACAAGGATCGAGACAAGGCCAAAGACAAGTATGTCC...GCCAAGTTTCTGCAAGAAGCAAGGATCCTGAAACAGTACAACCACCCCAACATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000206744.2
3UTR GCA 72 bp AGGAGCGGCACGGCTGGGGGCTCGCCCGTGCCGAGCTaGTCCATCTTGCTCTGCAGAAGTTCCTGCTGGGCC +
Preference number: 3 (lower is better)
Translates to: RSGTAGGSPVPS*SILLCRSSCWA
Trigger: GGCCCAGCAGGAACTTCTGCAGAGCAAGATGGAGCAGCTCGGCACGGGCGAGCCCCCAGCCGTGCCGCTCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206744.2
3UTR CCA 72 bp GGTGGAATGGCGGTCATCCTGAAGGAGCGGCACGGCTaGGGGCTCGCCCGTGCCGAGCTGCTCCATCTTGCT +
Preference number: 3 (lower is better)
Translates to: GGMAVILKERHG*GLARAELLHLA
Trigger: AGCAAGATGGAGCAGCTCGGCACGGGCGAGCCCCCAGCCGTGCCGCTCCTTCAGGATGACCGCCATTCCACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206744.2
3UTR GCA 72 bp GAGCCCAGAAGGCTGGCGAGTCCCTGGGCCGTGGGCTaGACTTACCCTTCCGATCTGCTCTCCCAGCACCAG +
Preference number: 3 (lower is better)
Translates to: EPRRLASPWAVG*TYPSDLLSQHQ
Trigger: CTGGTGCTGGGAGAGCAGATCGGAAGGGTAAGTGCAGCCCACGGCCCAGGGACTCGCCAGCCTTCTGGGCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000205617.2
ENSMUST00000206479.2
3UTR CCA 72 bp CTCCTGCTCCTGAGGCCAGGGACAGACGTCAGCGAGTaGCCAGGCGTGGAGGAGGTGGAATGGCGGTCATCC +
Preference number: 3 (lower is better)
Translates to: LLLLRPGTDVSE*PGVEEVEWRSS
Trigger: GGATGACCGCCATTCCACCTCCTCCACGCCTGGCCACTCGCTGACGTCTGTCCCTGGCCTCAGGAGCAGGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000206479.2
ENSMUST00000206744.2
3UTR TCA 72 bp GAGGTGGGACGGGGTGAGGGGCCTGGACGAAGCTGGTaGGGAAAGTCACAGGTAGAGCCCAGAAGGCTGGCG +
Preference number: 3 (lower is better)
Translates to: EVGRGEGPGRSW*GKSQVEPRRLA
Trigger: CGCCAGCCTTCTGGGCTCTACCTGTGACTTTCCTCACCAGCTTCGTCCAGGCCCCTCACCCCGTCCCACCTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000205617.2
ENSMUST00000206479.2
3UTR GCA 72 bp CAGCATGAACCGGTGGTGGTGGTGGTGGTGCAGCTGTaGGGCCCTCACACCCAGGACGTAGCGGTTGTGGTG +
Preference number: 3 (lower is better)
Translates to: QHEPVVVVVVQL*GPHTQDVAVVV
Trigger: CACCACAACCGCTACGTCCTGGGTGTGAGGGCCGCACAGCTGCACCACCACCACCACCACCGGTTCATGCTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206744.2
3UTR CCA 72 bp TCATTGGGTCAGGGAGACCCTCTAGGACTCTGGAGGTaGAACCCGAGGTGGGACGGGGTGAGGGGCCTGGAC +
Preference number: 3 (lower is better)
Translates to: SLGQGDPLGLWR*NPRWDGVRGLD
Trigger: GTCCAGGCCCCTCACCCCGTCCCACCTCGGGTTCCACCTCCAGAGTCCTAGAGGGTCTCCCTGACCCAATGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000205617.2
ENSMUST00000206479.2
3UTR CCA 72 bp GGGATCTCATTGGGTCAGGGAGACCCTCTAGGACTCTaGAGGTGGAACCCGAGGTGGGACGGGGTGAGGGGC +
Preference number: 3 (lower is better)
Translates to: GISLGQGDPLGL*RWNPRWDGVRG
Trigger: GCCCCTCACCCCGTCCCACCTCGGGTTCCACCTCCAGAGTCCTAGAGGGTCTCCCTGACCCAATGAGATCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000205617.2
ENSMUST00000206479.2
3UTR-3UTR CAA 90 bp AGCTGCGTCCCCTACCATCTGCAGCAGAGTCTTCACCCGCAGGCGGGCTCCCTCAGAACCCACTTGTCCTaGGGCACCGCCCTGAACAGG +
Preference number: 3 (lower is better)
Translates to: SCVPYHLQQSLHPQAGSLRTHLS*GTALNR
Trigger: CCTGTTCAGGGCGGTGCCCAAGGACAAGTGGGTTCT...GAGGGAGCCCGCCTGCGGGTGAAGACTCTGCTGCAGATGGTAGGGGACGCAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206744.2
3UTR GCA 72 bp GTCCCTGGGCCGTGGGCTGCACTTACCCTTCCGATCTaGTCTCCCAGCACCAGGTCCTCGTGCTTCAGAACC +
Preference number: 3 (lower is better)
Translates to: VPGPWAALTLPI*SPSTRSSCFRT
Trigger: GGTTCTGAAGCACGAGGACCTGGTGCTGGGAGAGCAGATCGGAAGGGTAAGTGCAGCCCACGGCCCAGGGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000205617.2
ENSMUST00000206479.2
3UTR-3UTR CAA 90 bp TGCACCTCCGGCACGAGCTGCAGTGGTGGAGGGATAGAGAACTTGGGGCGGAAGCTGCCGGAAGCCCTGTaGCTGGTGGTTGGAACCCTG +
Preference number: 3 (lower is better)
Translates to: CTSGTSCSGGGIENLGRKLPEAL*LVVGTL
Trigger: CAGGGTTCCAACCACCAGCAACAGGGCTTCCGGCAG...CTTCCGCCCCAAGTTCTCTATCCCTCCACCACTGCAGCTCGTGCCGGAGGTGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206744.2
3UTR-3UTR CAA 90 bp GAAGGAGCGGCACGGCTGGGGGCTCGCCCGTGCCGAGCTGCTCCATCTTGCTCTTACTTGTCTTTGGCCTaGTCTCGATCCTTGTCTGCC +
Preference number: 3 (lower is better)
Translates to: EGAARLGARPCRAAPSCSYLSLA*SRSLSA
Trigger: GGCAGACAAGGATCGAGACAAGGCCAAAGACAAGTA...AGAGCAAGATGGAGCAGCTCGGCACGGGCGAGCCCCCAGCCGTGCCGCTCCTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000206744.2
3UTR TCA 72 bp GGCATGAGGTCAGCGGCTTCCCTTGGTGAGGGGGCCTaGGGTCTGGGAGAGGACGAAAAGAGCAACAGAGGG +
Preference number: 3 (lower is better)
Translates to: GMRSAASLGEGA*GLGEDEKSNRG
Trigger: CCCTCTGTTGCTCTTTTCGTCCTCTCCCAGACCTCAGGCCCCCTCACCAAGGGAAGCCGCTGACCTCATGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000206479.2
3UTR TCA 72 bp GAAGAGTGGCCGCGAATGCCTGCAGCCTTGGACACGTaGCTGCAGGTGGGGGCCCTGGCTAGTACCTCTTTG +
Preference number: 3 (lower is better)
Translates to: EEWPRMPAALDT*LQVGALASTSL
Trigger: CAAAGAGGTACTAGCCAGGGCCCCCACCTGCAGTCACGTGTCCAAGGCTGCAGGCATTCGCGGCCACTCTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000206479.2
3UTR CCA 72 bp CCCTGCCGGAAGCCCTGTTGCTGGTGGTTGGAACCCTaGTCTTGGAGCTGTCCAGCAGTGAGTGGGAACTGC +
Preference number: 3 (lower is better)
Translates to: PCRKPCCWWLEP*SWSCPAVSGNC
Trigger: GCAGTTCCCACTCACTGCTGGACAGCTCCAAGACCAGGGTTCCAACCACCAGCAACAGGGCTTCCGGCAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000080932.8
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206728.2
ENSMUST00000206735.2
ENSMUST00000206744.2
3UTR CCA 72 bp AAGTCACAGGTAGAGCCCAGAAGGCTGGCGAGTCCCTaGGCCGTGGGCTGCACTTACCCTTCCGATCTGCTC +
Preference number: 3 (lower is better)
Translates to: KSQVEPRRLASP*AVGCTYPSDLL
Trigger: GAGCAGATCGGAAGGGTAAGTGCAGCCCACGGCCCAGGGACTCGCCAGCCTTCTGGGCTCTACCTGTGACTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000205617.2
ENSMUST00000206479.2
3UTR-3UTR CAA 90 bp GCCTCCGGGTCTCACCGATGCCGCTTGCGGATACTGTGGAGCTCCTGGCAGATGGCTTCTTGCAGAAACTaGGCCTTGAGGTCAGGTGGG +
Preference number: 3 (lower is better)
Translates to: ASGSHRCRLRILWSSWQMASCRN*ALRSGG
Trigger: CCCACCTGACCTCAAGGCCAAGTTTCTGCAAGAAGC...CATCTGCCAGGAGCTCCACAGTATCCGCAAGCGGCATCGGTGAGACCCGGAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206744.2
3UTR TCA 72 bp GGTGGTTGGAACCCTGGTCTTGGAGCTGTCCAGCAGTaGGTGGGAACTGCTGAGGAGGTACACGCTCGCCTC +
Preference number: 3 (lower is better)
Translates to: GGWNPGLGAVQQ*VGTAEEVHARL
Trigger: GAGGCGAGCGTGTACCTCCTCAGCAGTTCCCACTCACTGCTGGACAGCTCCAAGACCAGGGTTCCAACCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000080932.8
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206728.2
ENSMUST00000206735.2
ENSMUST00000206744.2
3UTR TCA 72 bp CAGAATGCCCGCCATCTCCTCGTGCAAATCCTGCAGTaGCTGCAGCAGGCCAGGCAGCATGAACCGGTGGTG +
Preference number: 3 (lower is better)
Translates to: QNARHLLVQILQ*LQQARQHEPVV
Trigger: CACCACCGGTTCATGCTGCCTGGCCTGCTGCAGTCACTGCAGGATTTGCACGAGGAGATGGCGGGCATTCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000206479.2
ENSMUST00000206744.2
3UTR GCA 72 bp TGGGTCTTGGTGAGCTCCTGCTGCAGCTGCTGCCACTaGTCGTTGTACGTCTTTCTCAGGTGCTGCCGCTCC +
Preference number: 3 (lower is better)
Translates to: WVLVSSCCSCCH*SLYVFLRCCRS
Trigger: GGAGCGGCAGCACCTGAGAAAGACGTACAACGAGCAGTGGCAGCAGCTGCAGCAGGAGCTCACCAAGACCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206539.2
3UTR CCA 72 bp AAGGGAAAGAAGAGTGGCCGCGAATGCCTGCAGCCTTaGACACGTGACTGCAGGTGGGGGCCCTGGCTAGTA +
Preference number: 3 (lower is better)
Translates to: KGKKSGRECLQP*TRDCRWGPWLV
Trigger: TACTAGCCAGGGCCCCCACCTGCAGTCACGTGTCCAAGGCTGCAGGCATTCGCGGCCACTCTTCTTTCCCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000206479.2
3UTR-3UTR CAA 90 bp CTCATAGAGAGGCTTCTGCACCTCCGGCACGAGCTGCAGTGGTGGAGGGATAGAGCTCAGGGCATGGGGTaGGTATCCCAGAGGCCTAAG +
Preference number: 3 (lower is better)
Translates to: LIERLLHLRHELQWWRDRAQGMG*VSQRPK
Trigger: CTTAGGCCTCTGGGATACCAACCCCATGCCCTGAGC...TCTATCCCTCCACCACTGCAGCTCGTGCCGGAGGTGCAGAAGCCTCTCTATGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000206744.2
3UTR-3UTR CAA 90 bp CTGGTGGTTGGAACCCTGGTCTTGGAGCTGTCCAGCAGTGAGTGGGAACTGCTGTGCTTCAGAACCCACTaGTCCTTGGGCACCGCCCTG +
Preference number: 3 (lower is better)
Translates to: LVVGTLVLELSSSEWELLCFRTH*SLGTAL
Trigger: CAGGGCGGTGCCCAAGGACAAGTGGGTTCTGAAGCA...CAGCAGTTCCCACTCACTGCTGGACAGCTCCAAGACCAGGGTTCCAACCACCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206744.2
3UTR TCA 72 bp GGCAGTCCACTTAACAGGGACTTGTCTGAGGCCCGCTaGGGCGGCATAGATCCCATCAGCTTCTTCGCGGGA +
Preference number: 3 (lower is better)
Translates to: GSPLNRDLSEAR*GGIDPISFFAG
Trigger: TCCCGCGAAGAAGCTGATGGGATCTATGCCGCCTCAGCGGGCCTCAGACAAGTCCCTGTTAAGTGGACTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206744.2
3UTR GCA 72 bp TCCTTCAGAATGCCCGCCATCTCCTCGTGCAAATCCTaGAGTGACTGCAGCAGGCCAGGCAGCATGAACCGG +
Preference number: 3 (lower is better)
Translates to: SFRMPAISSCKS*SDCSRPGSMNR
Trigger: CCGGTTCATGCTGCCTGGCCTGCTGCAGTCACTGCAGGATTTGCACGAGGAGATGGCGGGCATTCTGAAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000206479.2
ENSMUST00000206744.2
3UTR GCA 72 bp TGCAGGATGTCCTTCAGAATGCCCGCCATCTCCTCGTaGAAATCCTGCAGTGACTGCAGCAGGCCAGGCAGC +
Preference number: 3 (lower is better)
Translates to: CRMSFRMPAISS*KSCSDCSRPGS
Trigger: GCTGCCTGGCCTGCTGCAGTCACTGCAGGATTTGCACGAGGAGATGGCGGGCATTCTGAAGGACATCCTGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000206479.2
ENSMUST00000206744.2
3UTR GCA 72 bp CCGAGCAGCAGCTGCAGCCAGCTCACGGTGAATGGATaGCACATCGTCCTGCACCAGACTGCTAATCTCCAG +
Preference number: 3 (lower is better)
Translates to: PSSSCSQLTVNG*HIVLHQTANLQ
Trigger: CTGGAGATTAGCAGTCTGGTGCAGGACGATGTGGCATCCATTCACCGTGAGCTGGCTGCAGCTGCTGCTCGG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000206479.2
ENSMUST00000206744.2
3UTR GCA 72 bp GCAACCCTTGTATTGCCTCTTGCAGCATCTGCCTCTTaGTCAGAAGCTGCACCCGTTCCCGGGGGTGGGTGT +
Preference number: 3 (lower is better)
Translates to: ATLVLPLAASAS*SEAAPVPGGGC
Trigger: ACACCCACCCCCGGGAACGGGTGCAGCTTCTGAGCAAGAGGCAGATGCTGCAAGAGGCAATACAAGGGTTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206744.2
3UTR GCA 72 bp TTGCTCAAGGGCCCCGAGTTCAGATCTTCTGCATGCTaGCGCAGCACCCGGCTCAAGTTCTCGGTCTGGCTT +
Preference number: 3 (lower is better)
Translates to: LLKGPEFRSSAC*RSTRLKFSVWL
Trigger: AAGCCAGACCGAGAACTTGAGCCGGGTGCTGCGGCAGCATGCAGAAGATCTGAACTCGGGGCCCTTGAGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000206539.2
3UTR GCA 72 bp AGTTTGCTCAAGGGCCCCGAGTTCAGATCTTCTGCATaGTGCCGCAGCACCCGGCTCAAGTTCTCGGTCTGG +
Preference number: 3 (lower is better)
Translates to: SLLKGPEFRSSA*CRSTRLKFSVW
Trigger: CCAGACCGAGAACTTGAGCCGGGTGCTGCGGCAGCATGCAGAAGATCTGAACTCGGGGCCCTTGAGCAAACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000206539.2
3UTR GCA 72 bp GCTCAGTTTGCTCAAGGGCCCCGAGTTCAGATCTTCTaGATGCTGCCGCAGCACCCGGCTCAAGTTCTCGGT +
Preference number: 3 (lower is better)
Translates to: AQFAQGPRVQIF*MLPQHPAQVLG
Trigger: ACCGAGAACTTGAGCCGGGTGCTGCGGCAGCATGCAGAAGATCTGAACTCGGGGCCCTTGAGCAAACTGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000206539.2
3UTR GCA 72 bp TCAGGTGCTGCCGCTCCCGGATCAGCACGCTCAGTTTaGTCAAGGGCCCCGAGTTCAGATCTTCTGCATGCT +
Preference number: 3 (lower is better)
Translates to: SGAAAPGSARSV*SRAPSSDLLHA
Trigger: AGCATGCAGAAGATCTGAACTCGGGGCCCTTGAGCAAACTGAGCGTGCTGATCCGGGAGCGGCAGCACCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000206539.2
3UTR CCA 72 bp GCCTCCGGGTCTCACCGATGCCGCTTGCGGATACTGTaGAGCTCCTGGCAGATGATGCTGAAACTAGGTCTC +
Preference number: 3 (lower is better)
Translates to: ASGSHRCRLRIL*SSWQMMLKLGL
Trigger: GAGACCTAGTTTCAGCATCATCTGCCAGGAGCTCCACAGTATCCGCAAGCGGCATCGGTGAGACCCGGAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206735.2
ENSMUST00000206744.2
3UTR CCA 72 bp CGCGAATGCCTGCAGCCTTGGACACGTGACTGCAGGTaGGGGCCCTGGCTAGTACCTCTTTGCATTATGGGT +
Preference number: 3 (lower is better)
Translates to: RECLQPWTRDCR*GPWLVPLCIMG
Trigger: ACCCATAATGCAAAGAGGTACTAGCCAGGGCCCCCACCTGCAGTCACGTGTCCAAGGCTGCAGGCATTCGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000206479.2
3UTR-3UTR CAA 90 bp CACCGATGCCGCTTGCGGATACTGTGGAGCTCCTGGCAGATGATGCTGAAACTACTGCCGGAAGCCCTGTaGCTGGTGGTTGGAACCCTG +
Preference number: 3 (lower is better)
Translates to: HRCRLRILWSSWQMMLKLLPEAL*LVVGTL
Trigger: CAGGGTTCCAACCACCAGCAACAGGGCTTCCGGCAG...TAGTTTCAGCATCATCTGCCAGGAGCTCCACAGTATCCGCAAGCGGCATCGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206735.2
ENSMUST00000206744.2
3UTR-3UTR CAA 90 bp CTGGTGGTTGGAACCCTGGTCTTGGAGCTGTCCAGCAGTGAGTGGGAACTGCTGGGAGGGATAGAGAACTaGGGGCGGAAGATTCCGGAG +
Preference number: 3 (lower is better)
Translates to: LVVGTLVLELSSSEWELLGGIEN*GRKIPE
Trigger: CTCCGGAATCTTCCGCCCCAAGTTCTCTATCCCTCC...CAGCAGTTCCCACTCACTGCTGGACAGCTCCAAGACCAGGGTTCCAACCACCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206744.2
3UTR-3UTR CAA 90 bp GTCCTCGTGCTTCAGAACCCACTTGTCCTTGGGCACCGCCCTGAACAGGACAACGGAGGGATAGAGAACTaGGGGCGGAAGATTCCGGAG +
Preference number: 3 (lower is better)
Translates to: VLVLQNPLVLGHRPEQDNGGIEN*GRKIPE
Trigger: CTCCGGAATCTTCCGCCCCAAGTTCTCTATCCCTCC...GTTGTCCTGTTCAGGGCGGTGCCCAAGGACAAGTGGGTTCTGAAGCACGAGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206744.2
3UTR-3UTR CAA 90 bp GATGTAGATCGGCTGTTTCTGTGTGCAGACCCCGATGAGACGCACAATGTTGGGCTGCCGGAAGCCCTGTaGCTGGTGGTTGGAACCCTG +
Preference number: 3 (lower is better)
Translates to: DVDRLFLCADPDETHNVGLPEAL*LVVGTL
Trigger: CAGGGTTCCAACCACCAGCAACAGGGCTTCCGGCAG...CCCAACATTGTGCGTCTCATCGGGGTCTGCACACAGAAACAGCCGATCTACATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206744.2
3UTR-3UTR CAA 90 bp ACTTACCCTTCCGATCTGCTCTCCCAGCACCAGGTCCTCGTGCTTCAGAACCCATGCAGCATCTGCCTCTaGCTCAGAAGCTGCACCCGT +
Preference number: 3 (lower is better)
Translates to: TYPSDLLSQHQVLVLQNPCSICL*LRSCTR
Trigger: ACGGGTGCAGCTTCTGAGCAAGAGGCAGATGCTGCA...TGGGTTCTGAAGCACGAGGACCTGGTGCTGGGAGAGCAGATCGGAAGGGTAAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000205617.2
ENSMUST00000206479.2
3UTR-3UTR CAA 90 bp ATCAGGGCACAGCTCTGGGCAAGGCAGACGATGCCCCTTTTCTACAAACTCCCGGGAGGGATAGAGAACTaGGGGCGGAAGATTCCGGAG +
Preference number: 3 (lower is better)
Translates to: IRAQLWARQTMPLFYKLPGGIEN*GRKIPE
Trigger: CTCCGGAATCTTCCGCCCCAAGTTCTCTATCCCTCC...CGGGAGTTTGTAGAAAAGGGGCATCGTCTGCCTTGCCCAGAGCTGTGCCCTGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000205617.2
ENSMUST00000206744.2
3UTR-3UTR CAA 90 bp CTGGTGGTTGGAACCCTGGTCTTGGAGCTGTCCAGCAGTGAGTGGGAACTGCTGTGCAGAAACTTGGCCTaGAGGTCAGGTGGGAGTGTC +
Preference number: 3 (lower is better)
Translates to: LVVGTLVLELSSSEWELLCRNLA*RSGGSV
Trigger: GACACTCCCACCTGACCTCAAGGCCAAGTTTCTGCA...CAGCAGTTCCCACTCACTGCTGGACAGCTCCAAGACCAGGGTTCCAACCACCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206744.2
3UTR-3UTR CAA 90 bp CTGGTGGTTGGAACCCTGGTCTTGGAGCTGTCCAGCAGTGAGTGGGAACTGCTGGCTTCTTGCAGAAACTaGGCCTTGAGGTCAGGTGGG +
Preference number: 3 (lower is better)
Translates to: LVVGTLVLELSSSEWELLASCRN*ALRSGG
Trigger: CCCACCTGACCTCAAGGCCAAGTTTCTGCAAGAAGC...CAGCAGTTCCCACTCACTGCTGGACAGCTCCAAGACCAGGGTTCCAACCACCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206744.2
3UTR TCA 72 bp TCTGTTCCTCACTTTGGAGCTCACGCTGCAGCTGACTaGCCATCTCCTGCCGGCTCAGCACCTCTTTGGTGG +
Preference number: 3 (lower is better)
Translates to: SVPHFGAHAAAD*PSPAGSAPLWW
Trigger: CCACCAAAGAGGTGCTGAGCCGGCAGGAGATGGTCAGTCAGCTGCAGCGTGAGCTCCAAAGTGAGGAACAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206744.2
3UTR GCA 72 bp GCTATCTGCAACCCTTGTATTGCCTCTTGCAGCATCTaGCTCTTGCTCAGAAGCTGCACCCGTTCCCGGGGG +
Preference number: 3 (lower is better)
Translates to: AICNPCIASCSI*LLLRSCTRSRG
Trigger: CCCCCGGGAACGGGTGCAGCTTCTGAGCAAGAGGCAGATGCTGCAAGAGGCAATACAAGGGTTGCAGATAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206744.2
3UTR GCA 72 bp CCACTAAACACCTCTCCGAAGTTCCCCCTTCCGATCTaGTCTCCCAGCACCAGGTCCTCGTGCTTCAGAACC +
Preference number: 3 (lower is better)
Translates to: PLNTSPKFPLPI*SPSTRSSCFRT
Trigger: GGTTCTGAAGCACGAGGACCTGGTGCTGGGAGAGCAGATCGGAAGGGGGAACTTCGGAGAGGTGTTTAGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000206744.2
3UTR GCA 72 bp AGACAGAAAGCTAAGGGAAAGAAGAGTGGCCGCGAATaGCTGCAGCCTTGGACACGTGACTGCAGGTGGGGG +
Preference number: 3 (lower is better)
Translates to: RQKAKGKKSGRE*LQPWTRDCRWG
Trigger: CCCCCACCTGCAGTCACGTGTCCAAGGCTGCAGGCATTCGCGGCCACTCTTCTTTCCCTTAGCTTTCTGTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206479.2
3UTR CCA 72 bp ATAGAGAGGCTTCTGCACCTCCGGCACGAGCTGCAGTaGTGGAGGGATAGAGAACTTGGGGCGGAAGATTCC +
Preference number: 3 (lower is better)
Translates to: IERLLHLRHELQ*WRDRELGAEDS
Trigger: GGAATCTTCCGCCCCAAGTTCTCTATCCCTCCACCACTGCAGCTCGTGCCGGAGGTGCAGAAGCCTCTCTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206744.2
3UTR CCA 72 bp TCTCACCGATGCCGCTTGCGGATACTGTGGAGCTCCTaGCAGATGATGCTGAAACTAGGTCTCTGCCCAGGC +
Preference number: 3 (lower is better)
Translates to: SHRCRLRILWSS*QMMLKLGLCPG
Trigger: GCCTGGGCAGAGACCTAGTTTCAGCATCATCTGCCAGGAGCTCCACAGTATCCGCAAGCGGCATCGGTGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206735.2
ENSMUST00000206744.2
3UTR TCA 72 bp GTGTTCTGTTCCTCACTTTGGAGCTCACGCTGCAGCTaGCTGACCATCTCCTGCCGGCTCAGCACCTCTTTG +
Preference number: 3 (lower is better)
Translates to: VFCSSLWSSRCS*LTISCRLSTSL
Trigger: CAAAGAGGTGCTGAGCCGGCAGGAGATGGTCAGTCAGCTGCAGCGTGAGCTCCAAAGTGAGGAACAGAACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206744.2
3UTR GCA 72 bp CTCTCGGCAAGACTTCACAGCCACCGGGGTATTGTCTaGACGAAGGCGGCCACTAAACACCTCTCCGAAGTT +
Preference number: 3 (lower is better)
Translates to: LSARLHSHRGIV*TKAATKHLSEV
Trigger: AACTTCGGAGAGGTGTTTAGTGGCCGCCTTCGTGCAGACAATACCCCGGTGGCTGTGAAGTCTTGCCGAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206744.2
3UTR GCA 72 bp TCAATGTCCTGGCTGTGGGTCTTGGTGAGCTCCTGCTaGAGCTGCTGCCACTGCTCGTTGTACGTCTTTCTC +
Preference number: 3 (lower is better)
Translates to: SMSWLWVLVSSC*SCCHCSLYVFL
Trigger: GAGAAAGACGTACAACGAGCAGTGGCAGCAGCTGCAGCAGGAGCTCACCAAGACCCACAGCCAGGACATTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206539.2
3UTR CCA 72 bp TCCCACATCACAGACAGTACATACTCCTGCTTGCCCTaGCTCTCCCGAACCAGGAAGTCCCCGGAGTGTGTT +
Preference number: 3 (lower is better)
Translates to: SHITDSTYSCLP*LSRTRKSPECV
Trigger: AACACACTCCGGGGACTTCCTGGTTCGGGAGAGCCAGGGCAAGCAGGAGTATGTACTGTCTGTGATGTGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206744.2
3UTR CCA 72 bp CCATCCCCTTCCAGCCGGTACAGGTTATCTGAGGACTaGATGATGAAATGTCGGGGCTGGCCATCCCACATC +
Preference number: 3 (lower is better)
Translates to: PSPSSRYRLSED*MMKCRGWPSHI
Trigger: GATGTGGGATGGCCAGCCCCGACATTTCATCATCCAGTCCTCAGATAACCTGTACCGGCTGGAAGGGGATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000205617.2
ENSMUST00000206744.2
3UTR CCA 72 bp CTCCATGAGCCTGAAGACCGCATCAGGGCACAGCTCTaGGCAAGGCAGACGATGCCCCTTTTCTACAAACTC +
Preference number: 3 (lower is better)
Translates to: LHEPEDRIRAQL*ARQTMPLFYKL
Trigger: GAGTTTGTAGAAAAGGGGCATCGTCTGCCTTGCCCAGAGCTGTGCCCTGATGCGGTCTTCAGGCTCATGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000205617.2
ENSMUST00000206744.2
3UTR-3UTR CAA 90 bp AGAGAGGAATTTGGGCAGGAAGAAGGATGGAGAGCCGCACCCTGCCGGAAGCCCTGCTATCTGCAACCCTaGTATTGCCTCTTGCAGCAT +
Preference number: 3 (lower is better)
Translates to: REEFGQEEGWRAAPCRKPCYLQP*YCLLQH
Trigger: ATGCTGCAAGAGGCAATACAAGGGTTGCAGATAGCA...GGGCTTCCGGCAGGGTGCGGCTCTCCATCCTTCTTCCTGCCCAAATTCCTCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206744.2
3UTR-3UTR CAA 90 bp TCTCACCGATGCCGCTTGCGGATACTGTGGAGCTCCTGGCAGATGATGCTGAAACTTCTTTGTAAGGGGTaGCTGGGAGGACAGCAGGTG +
Preference number: 3 (lower is better)
Translates to: SHRCRLRILWSSWQMMLKLLCKG*LGGQQV
Trigger: CACCTGCTGTCCTCCCAGCAACCCCTTACAAAGAAG...TTTCAGCATCATCTGCCAGGAGCTCCACAGTATCCGCAAGCGGCATCGGTGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206744.2
3UTR-3UTR CAA 90 bp TCCCTGTGGATACAACACTTGCTTTCCAAGTATTCCATGCCAGCAGCTGCGTCCAGAACCCACTTGTCCTaGGGCACCGCCCTGAACAGG +
Preference number: 3 (lower is better)
Translates to: SLWIQHLLSKYSMPAAASRTHLS*GTALNR
Trigger: CCTGTTCAGGGCGGTGCCCAAGGACAAGTGGGTTCT...GGACGCAGCTGCTGGCATGGAATACTTGGAAAGCAAGTGTTGTATCCACAGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206744.2
3UTR GCA 72 bp TCGTCCTGCACCAGACTGCTAATCTCCAGGTATTCCTaGAGGATGTCCTTCAGAATGCCCGCCATCTCCTCG +
Preference number: 3 (lower is better)
Translates to: SSCTRLLISRYS*RMSFRMPAISS
Trigger: CGAGGAGATGGCGGGCATTCTGAAGGACATCCTGCAGGAATACCTGGAGATTAGCAGTCTGGTGCAGGACGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000206479.2
ENSMUST00000206744.2
3UTR GCA 72 bp GGGGTGGTTGTACTGTTTCAGGATCCTGGGGAGCACTaGTGCTTAGGCTACATGCAATCTGTGCTCACAGCC +
Preference number: 3 (lower is better)
Translates to: GVVVLFQDPGEH*CLGYMQSVLTA
Trigger: GGCTGTGAGCACAGATTGCATGTAGCCTAAGCAGCAGTGCTCCCCAGGATCCTGAAACAGTACAACCACCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000206479.2
3UTR-3UTR CAA 90 bp AGTGTCTCTCGGCAAGACTTCACAGCCACCGGGGTATTGTCTGCACGAAGGCGGTGCTATCTGCAACCCTaGTATTGCCTCTTGCAGCAT +
Preference number: 3 (lower is better)
Translates to: SVSRQDFTATGVLSARRRCYLQP*YCLLQH
Trigger: ATGCTGCAAGAGGCAATACAAGGGTTGCAGATAGCA...CCGCCTTCGTGCAGACAATACCCCGGTGGCTGTGAAGTCTTGCCGAGAGACACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206744.2
3UTR GCA 72 bp CCCTGTGGATACAACACTTGCTTTCCAAGTATTCCATaGCAGCAGCTGCGTCCCCTACCATCTGCAGCAGAG +
Preference number: 3 (lower is better)
Translates to: PCGYNTCFPSIP*QQLRPLPSAAE
Trigger: CTCTGCTGCAGATGGTAGGGGACGCAGCTGCTGGCATGGAATACTTGGAAAGCAAGTGTTGTATCCACAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206744.2
3UTR GCA 72 bp CGAAGGCGGCCACTAAACACCTCTCCGAAGTTCCCCTaGAATAGTCCTGGATTCCTACCACAACTTCCTGGT +
Preference number: 3 (lower is better)
Translates to: RRRPLNTSPKFP*NSPGFLPQLPG
Trigger: ACCAGGAAGTTGTGGTAGGAATCCAGGACTATTGCAGGGGAACTTCGGAGAGGTGTTTAGTGGCCGCCTTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000205617.2
ENSMUST00000206479.2
3UTR GCA 72 bp AGGGACCTCGAGCCTCACTCATTTGATGACCCACCTTaGTTCTTGCAGAAACTTGGCCTTGAGGTCAGGTGG +
Preference number: 3 (lower is better)
Translates to: RDLEPHSFDDPP*FLQKLGLEVRW
Trigger: CCACCTGACCTCAAGGCCAAGTTTCTGCAAGAAGCAAGGTGGGTCATCAAATGAGTGAGGCTCGAGGTCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206479.2
3UTR CCA 72 bp GGGATAGAGAACTTGGGGCGGAAGATTCCGGAGAAGTaGCTTTTAAGGATCTCCAGTGTGGGTGTCCTTCCC +
Preference number: 3 (lower is better)
Translates to: GIENLGRKIPEK*LLRISSVGVLP
Trigger: GGGAAGGACACCCACACTGGAGATCCTTAAAAGCCACTTCTCCGGAATCTTCCGCCCCAAGTTCTCTATCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206744.2
3UTR-3UTR CAA 90 bp CATGACGATGTAGATCGGCTGTTTCTGTGTGCAGACCCCGATGAGACGCACAATGTTCTGTTCCTCACTTaGGAGCTCACGCTGCAGCTG +
Preference number: 3 (lower is better)
Translates to: HDDVDRLFLCADPDETHNVLFLT*ELTLQL
Trigger: CAGCTGCAGCGTGAGCTCCAAAGTGAGGAACAGAAC...ATTGTGCGTCTCATCGGGGTCTGCACACAGAAACAGCCGATCTACATCGTCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206744.2
3UTR TCA 72 bp AAGAGGACAGGCCATCTTGTCCCCAATTGTCCATGCTaGTTTGTCACCCTGGCTCTCTATGAAGACTCCCCC +
Preference number: 3 (lower is better)
Translates to: KRTGHLVPNCPC*FVTLALYEDSP
Trigger: GGGGGAGTCTTCATAGAGAGCCAGGGTGACAAATCAGCATGGACAATTGGGGACAAGATGGCCTGTCCTCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000205617.2
ENSMUST00000206479.2
3UTR GCA 72 bp TCGAGCCTCACTCATTTGATGACCCACCTTGCTTCTTaGAGAAACTTGGCCTTGAGGTCAGGTGGGAGTGTC +
Preference number: 3 (lower is better)
Translates to: SSLTHLMTHLAS*RNLALRSGGSV
Trigger: GACACTCCCACCTGACCTCAAGGCCAAGTTTCTGCAAGAAGCAAGGTGGGTCATCAAATGAGTGAGGCTCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206479.2
3UTR GCA 72 bp GTGGTTGTACTGTTTCAGGATCCTGGGGAGCACTGCTaGTTAGGCTACATGCAATCTGTGCTCACAGCCTTC +
Preference number: 3 (lower is better)
Translates to: VVVLFQDPGEHC*LGYMQSVLTAF
Trigger: GAAGGCTGTGAGCACAGATTGCATGTAGCCTAAGCAGCAGTGCTCCCCAGGATCCTGAAACAGTACAACCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000206479.2
3UTR CCA 72 bp CGCTATTTTCCGAGAAAGGAATCAGGGGGTATGAGCTaGGATCTCATTGGGTCAGGGAGACCCTCTAGGACT +
Preference number: 3 (lower is better)
Translates to: RYFPRKESGGMS*DLIGSGRPSRT
Trigger: AGTCCTAGAGGGTCTCCCTGACCCAATGAGATCCCAGCTCATACCCCCTGATTCCTTTCTCGGAAAATAGCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000205617.2
ENSMUST00000206479.2
3UTR-3UTR CAA 90 bp CATGACGATGTAGATCGGCTGTTTCTGTGTGCAGACCCCGATGAGACGCACAATCCCTTGTATTGCCTCTaGCAGCATCTGCCTCTTGCT +
Preference number: 3 (lower is better)
Translates to: HDDVDRLFLCADPDETHNPLYCL*QHLPLA
Trigger: AGCAAGAGGCAGATGCTGCAAGAGGCAATACAAGGG...ATTGTGCGTCTCATCGGGGTCTGCACACAGAAACAGCCGATCTACATCGTCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206744.2
3UTR-3UTR CAA 90 bp AAGGCAGACGATGCCCTAGGAGGACAGGTGCAATGTGCCAAGTATGAGAAGGGATCGAGCCTCACTCATTaGATGACCCACCTTGCTTCT +
Preference number: 3 (lower is better)
Translates to: KADDALGGQVQCAKYEKGSSLTH*MTHLAS
Trigger: AGAAGCAAGGTGGGTCATCAAATGAGTGAGGCTCGA...TCCCTTCTCATACTTGGCACATTGCACCTGTCCTCCTAGGGCATCGTCTGCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206479.2
3UTR-3UTR CAA 90 bp CAGTGGTGGAGGGATAGAGAACTTGGGGCGGAAGATTCCGGAGAAGTGGCTTTTTGCTATCTGCAACCCTaGTATTGCCTCTTGCAGCAT +
Preference number: 3 (lower is better)
Translates to: QWWRDRELGAEDSGEVAFCYLQP*YCLLQH
Trigger: ATGCTGCAAGAGGCAATACAAGGGTTGCAGATAGCA...AAAAGCCACTTCTCCGGAATCTTCCGCCCCAAGTTCTCTATCCCTCCACCACTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206744.2
3UTR-3UTR CAA 90 bp CTGGTGGTTGGAACCCTGGTCTTGGAGCTGTCCAGCAGTGAGTGGGAACTGCTGAGAAATCACTTTTCTTaGGGTTGGGAAAGCATTCTG +
Preference number: 3 (lower is better)
Translates to: LVVGTLVLELSSSEWELLRNHFS*GWESIL
Trigger: CAGAATGCTTTCCCAACCCAAAGAAAAGTGATTTCT...CAGCAGTTCCCACTCACTGCTGGACAGCTCCAAGACCAGGGTTCCAACCACCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000205617.2
ENSMUST00000206479.2
3UTR TCA 72 bp CGATGTAGATCGGCTGTTTCTGTGTGCAGACCCCGATaGGACGCACAATGTTGGGGTGGTTGTACTGTTTCA +
Preference number: 3 (lower is better)
Translates to: RCRSAVSVCRPR*DAQCWGGCTVS
Trigger: TGAAACAGTACAACCACCCCAACATTGTGCGTCTCATCGGGGTCTGCACACAGAAACAGCCGATCTACATCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206744.2
3UTR CCA 72 bp TGTGTGCAGACCCCGATGAGACGCACAATGTTGGGGTaGTTGTACTGTTTCAGGATCCTTGCTTCTTGCAGA +
Preference number: 3 (lower is better)
Translates to: CVQTPMRRTMLG*LYCFRILASCR
Trigger: TCTGCAAGAAGCAAGGATCCTGAAACAGTACAACCACCCCAACATTGTGCGTCTCATCGGGGTCTGCACACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000205617.2
ENSMUST00000206744.2
3UTR CCA 72 bp GTCTTCAAGAAGCGACTCATCAAAAGTGACACAAGGTaGCACATCAGGGGTGGATCTGTGGGTGGACAAGGT +
Preference number: 3 (lower is better)
Translates to: VFKKRLIKSDTR*HIRGGSVGGQG
Trigger: ACCTTGTCCACCCACAGATCCACCCCTGATGTGCCACCTTGTGTCACTTTTGATGAGTCGCTTCTTGAAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000206479.2
3UTR CCA 72 bp GCACAATGTTGGGGTGGTTGTACTGTTTCAGGATCCTaGGGAGCACTGCTGCTTAGGCTACATGCAATCTGT +
Preference number: 3 (lower is better)
Translates to: AQCWGGCTVSGS*GALLLRLHAIC
Trigger: ACAGATTGCATGTAGCCTAAGCAGCAGTGCTCCCCAGGATCCTGAAACAGTACAACCACCCCAACATTGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000206479.2
3UTR CCA 72 bp GTCTTCAAGAAGCGACTCATCAAAAGTGACACAAGGTaGCACATCAGGGGTGGATCCATATTGTCGCAGGAA +
Preference number: 3 (lower is better)
Translates to: VFKKRLIKSDTR*HIRGGSILSQE
Trigger: TTCCTGCGACAATATGGATCCACCCCTGATGTGCCACCTTGTGTCACTTTTGATGAGTCGCTTCTTGAAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000206744.2
3UTR TCA 72 bp AAAGAGTTTGGTGGGAACATCTTAGGAGCTTGGTCCTaGGGTACCATCATAAATCTGTGGCCTTACCCTTTT +
Preference number: 3 (lower is better)
Translates to: KEFGGNILGAWS*GTIINLWPYPF
Trigger: AAAAGGGTAAGGCCACAGATTTATGATGGTACCTCAGGACCAAGCTCCTAAGATGTTCCCACCAAACTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206479.2
3UTR CCA 72 bp TTTTCTTTGGGTTGGGAAAGCATTCTGATTGGAAAGTaGCTGGCATTTTACATTAACAGAGGAGCTTGGCAA +
Preference number: 3 (lower is better)
Translates to: FSLGWESILIGK*LAFYINRGAWQ
Trigger: TTGCCAAGCTCCTCTGTTAATGTAAAATGCCAGCCACTTTCCAATCAGAATGCTTTCCCAACCCAAAGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000205617.2
ENSMUST00000206479.2
3UTR TCA 72 bp CCAGAAATCACTTTTCTTTGGGTTGGGAAAGCATTCTaGTTGGAAAGTGGCTGGCATTTTACATTAACAGAG +
Preference number: 3 (lower is better)
Translates to: PEITFLWVGKAF*LESGWHFTLTE
Trigger: CTCTGTTAATGTAAAATGCCAGCCACTTTCCAATCAGAATGCTTTCCCAACCCAAAGAAAAGTGATTTCTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000205617.2
ENSMUST00000206479.2
3UTR TCA 72 bp GATATAAAAGTTACCTGTGCCACCTCCTCTAAGAAGTaGCATGGGAAATCCAGAAATCACTTTTCTTTGGGT +
Preference number: 3 (lower is better)
Translates to: DIKVTCATSSKK*HGKSRNHFSLG
Trigger: ACCCAAAGAAAAGTGATTTCTGGATTTCCCATGTCACTTCTTAGAGGAGGTGGCACAGGTAACTTTTATATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000205617.2
ENSMUST00000206479.2
CDS-3UTR GCA 90 bp CTGCTCCGTGGAGGAGGTGGAATGGCGGTCATCCTGAAGGAGCGGCACGGCTGGGGCTGTCGGGGCCGCTaGTCCAGCTCTGGCCTCCGC +
Preference number: 4 (lower is better)
Translates to: LLRGGGGMAVILKERHGWGCRGR*SSSGLR
Trigger: GCGGAGGCCAGAGCTGGAGCAGCGGCCCCGACAGCC...CCAGCCGTGCCGCTCCTTCAGGATGACCGCCATTCCACCTCCTCCACGGAGCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000205617.2
CDS-3UTR CCA 90 bp AGCGGCACGGCTGGGGGCTCGCCCGTGCCGAGCTGCTCCATCTTGCTCTGCAGAACTGCCCCGTGGCCCTaGGGGCTGCACAGCTCTGAA +
Preference number: 4 (lower is better)
Translates to: SGTAGGSPVPSCSILLCRTAPWP*GLHSSE
Trigger: TTCAGAGCTGTGCAGCCCCCAGGGCCACGGGGCAGT...TCTGCAGAGCAAGATGGAGCAGCTCGGCACGGGCGAGCCCCCAGCCGTGCCGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206744.2
CDS-3UTR GCA 90 bp AGCTGCGTCCCCTACCATCTGCAGCAGAGTCTTCACCCGCAGGCGGGCTCCCTCCTGCATCTGCTGCACTaGCCCGTGGCCCTGGGGGCT +
Preference number: 4 (lower is better)
Translates to: SCVPYHLQQSLHPQAGSLLHLLH*PVALGA
Trigger: AGCCCCCAGGGCCACGGGGCAGTGCAGCAGATGCAG...GAGGGAGCCCGCCTGCGGGTGAAGACTCTGCTGCAGATGGTAGGGGACGCAGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206744.2
CDS-3UTR CCA 90 bp ATGGAGAGCCGCACCCTGCCGGAAGCCCTGTTGCTGGTGGTTGGAACCCTGGTCTGCTGCACTGCCCCGTaGCCCTGGGGGCTGCACAGC +
Preference number: 4 (lower is better)
Translates to: MESRTLPEALLLVVGTLVCCTAP*PWGLHS
Trigger: GCTGTGCAGCCCCCAGGGCCACGGGGCAGTGCAGCA...GACCAGGGTTCCAACCACCAGCAACAGGGCTTCCGGCAGGGTGCGGCTCTCCAT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080932.8
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206728.2
ENSMUST00000206744.2
CDS-3UTR CCA 90 bp CCGCACCCTGCCGGAAGCCCTGTTGCTGGTGGTTGGAACCCTGGTCTTGGAGCTTGCTGCACTGCCCCGTaGCCCTGGGGGCTGCACAGC +
Preference number: 4 (lower is better)
Translates to: PHPAGSPVAGGWNPGLGACCTAP*PWGLHS
Trigger: GCTGTGCAGCCCCCAGGGCCACGGGGCAGTGCAGCA...AGCTCCAAGACCAGGGTTCCAACCACCAGCAACAGGGCTTCCGGCAGGGTGCGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080932.8
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206728.2
ENSMUST00000206744.2
CDS-3UTR GCA 90 bp GCCTCCGGGTCTCACCGATGCCGCTTGCGGATACTGTGGAGCTCCTGGCAGATGCTGCATCTGCTGCACTaGCCCGTGGCCCTGGGGGCT +
Preference number: 4 (lower is better)
Translates to: ASGSHRCRLRILWSSWQMLHLLH*PVALGA
Trigger: AGCCCCCAGGGCCACGGGGCAGTGCAGCAGATGCAG...CATCTGCCAGGAGCTCCACAGTATCCGCAAGCGGCATCGGTGAGACCCGGAGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206744.2
CDS-3UTR GCA 90 bp GTACACGCTCGCCTCCGGGTCTCACCGATGCCGCTTGCGGATACTGTGGAGCTCCTGCATCTGCTGCACTaGCCCGTGGCCCTGGGGGCT +
Preference number: 4 (lower is better)
Translates to: VHARLRVSPMPLADTVELLHLLH*PVALGA
Trigger: AGCCCCCAGGGCCACGGGGCAGTGCAGCAGATGCAG...GAGCTCCACAGTATCCGCAAGCGGCATCGGTGAGACCCGGAGGCGAGCGTGTAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206744.2
CDS-3UTR GCA 90 bp GGATGGAGAGCCGCACCCTGCCGGAAGCCCTGTTGCTGGTGGTTGGAACCCTGGGCTTCCTGCATCTGCTaGACTGCCCCGTGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: GWRAAPCRKPCCWWLEPWASCIC*TAPWPW
Trigger: CCAGGGCCACGGGGCAGTGCAGCAGATGCAGGAAGC...CCAGGGTTCCAACCACCAGCAACAGGGCTTCCGGCAGGGTGCGGCTCTCCATCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080932.8
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206728.2
ENSMUST00000206744.2
CDS-3UTR GCA 90 bp GTCTTGGAGCTGTCCAGCAGTGAGTGGGAACTGCTGAGGAGGTACACGCTCGCCGGCTGTCGGGGCCGCTaGTCCAGCTCTGGCCTCCGC +
Preference number: 4 (lower is better)
Translates to: VLELSSSEWELLRRYTLAGCRGR*SSSGLR
Trigger: GCGGAGGCCAGAGCTGGAGCAGCGGCCCCGACAGCC...GGCGAGCGTGTACCTCCTCAGCAGTTCCCACTCACTGCTGGACAGCTCCAAGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080932.8
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206728.2
ENSMUST00000206744.2
CDS-3UTR GCA 90 bp AGAGAGGAATTTGGGCAGGAAGAAGGATGGAGAGCCGCACCCTGCCGGAAGCCCGGCTGTCGGGGCCGCTaGTCCAGCTCTGGCCTCCGC +
Preference number: 4 (lower is better)
Translates to: REEFGQEEGWRAAPCRKPGCRGR*SSSGLR
Trigger: GCGGAGGCCAGAGCTGGAGCAGCGGCCCCGACAGCC...GGGCTTCCGGCAGGGTGCGGCTCTCCATCCTTCTTCCTGCCCAAATTCCTCTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080932.8
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206728.2
ENSMUST00000206744.2
CDS-3UTR GCA 90 bp CCAGAAGGCTGGCGAGTCCCTGGGCCGTGGGCTGCACTTACCCTTCCGATCTGCTGGCCAAGGGCTCCCTaGCCACACCCACACGTGGGT +
Preference number: 4 (lower is better)
Translates to: PEGWRVPGPWAALTLPICWPRAP*PHPHVG
Trigger: ACCCACGTGTGGGTGTGGGCAGGGAGCCCTTGGCCA...GCAGATCGGAAGGGTAAGTGCAGCCCACGGCCCAGGGACTCGCCAGCCTTCTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000205617.2
CDS-3UTR CCA 90 bp TGGAGAGCCGCACCCTGCCGGAAGCCCTGTTGCTGGTGGTTGGAACCCTGGTCTCGGTGGTGGTGGTGGTaGTGCAGCTGTGCGGCCCTC +
Preference number: 4 (lower is better)
Translates to: WRAAPCRKPCCWWLEPWSRWWWW*CSCAAL
Trigger: GAGGGCCGCACAGCTGCACCACCACCACCACCACCG...AGACCAGGGTTCCAACCACCAGCAACAGGGCTTCCGGCAGGGTGCGGCTCTCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000080932.8
ENSMUST00000205617.2
ENSMUST00000206728.2
CDS-3UTR CCA 90 bp GAGCTGTCCAGCAGTGAGTGGGAACTGCTGAGGAGGTACACGCTCGCCTCCGGGCGGTGGTGGTGGTGGTaGTGCAGCTGTGCGGCCCTC +
Preference number: 4 (lower is better)
Translates to: ELSSSEWELLRRYTLASGRWWWW*CSCAAL
Trigger: GAGGGCCGCACAGCTGCACCACCACCACCACCACCG...CCCGGAGGCGAGCGTGTACCTCCTCAGCAGTTCCCACTCACTGCTGGACAGCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000080932.8
ENSMUST00000205617.2
ENSMUST00000206728.2
CDS-3UTR GCA 90 bp GTTGGAACCCTGGTCTTGGAGCTGTCCAGCAGTGAGTGGGAACTGCTGAGGAGGGGCTGTCGGGGCCGCTaGTCCAGCTCTGGCCTCCGC +
Preference number: 4 (lower is better)
Translates to: VGTLVLELSSSEWELLRRGCRGR*SSSGLR
Trigger: GCGGAGGCCAGAGCTGGAGCAGCGGCCCCGACAGCC...CCTCCTCAGCAGTTCCCACTCACTGCTGGACAGCTCCAAGACCAGGGTTCCAAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000080932.8
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206728.2
ENSMUST00000206744.2
CDS-3UTR GCA 90 bp AGGAATTTGGGCAGGAAGAAGGATGGAGAGCCGCACCCTGCCGGAAGCCCTGTTGGCTGTCGGGGCCGCTaGTCCAGCTCTGGCCTCCGC +
Preference number: 4 (lower is better)
Translates to: RNLGRKKDGEPHPAGSPVGCRGR*SSSGLR
Trigger: GCGGAGGCCAGAGCTGGAGCAGCGGCCCCGACAGCC...AACAGGGCTTCCGGCAGGGTGCGGCTCTCCATCCTTCTTCCTGCCCAAATTCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080932.8
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206728.2
ENSMUST00000206744.2
CDS-3UTR GCA 90 bp GAGCCGCACCCTGCCGGAAGCCCTGTTGCTGGTGGTTGGAACCCTGGTCTTGGAGTGGTGGTGCAGCTGTaGGGCCCTCACACCCAGGAC +
Preference number: 4 (lower is better)
Translates to: EPHPAGSPVAGGWNPGLGVVVQL*GPHTQD
Trigger: GTCCTGGGTGTGAGGGCCGCACAGCTGCACCACCAC...TCCAAGACCAGGGTTCCAACCACCAGCAACAGGGCTTCCGGCAGGGTGCGGCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000080932.8
ENSMUST00000205617.2
ENSMUST00000206728.2
CDS-3UTR CCA 90 bp CCGCACCCTGCCGGAAGCCCTGTTGCTGGTGGTTGGAACCCTGGTCTTGGAGCTACTGCCCCGTGGCCCTaGGGGCTGCACAGCTCTGAA +
Preference number: 4 (lower is better)
Translates to: PHPAGSPVAGGWNPGLGATAPWP*GLHSSE
Trigger: TTCAGAGCTGTGCAGCCCCCAGGGCCACGGGGCAGT...AGCTCCAAGACCAGGGTTCCAACCACCAGCAACAGGGCTTCCGGCAGGGTGCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000080932.8
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206728.2
ENSMUST00000206744.2
CDS-3UTR CCA 90 bp GGAATTTGGGCAGGAAGAAGGATGGAGAGCCGCACCCTGCCGGAAGCCCTGTTGTGCTGCACTGCCCCGTaGCCCTGGGGGCTGCACAGC +
Preference number: 4 (lower is better)
Translates to: GIWAGRRMESRTLPEALLCCTAP*PWGLHS
Trigger: GCTGTGCAGCCCCCAGGGCCACGGGGCAGTGCAGCA...CAACAGGGCTTCCGGCAGGGTGCGGCTCTCCATCCTTCTTCCTGCCCAAATTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080932.8
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206728.2
ENSMUST00000206744.2
CDS-3UTR CCA 90 bp GCTCAGAAGCTGCACCCGTTCCCGGGGGTGGGTGTTCTGTTCCTCACTTTGGAGTGCTGCACTGCCCCGTaGCCCTGGGGGCTGCACAGC +
Preference number: 4 (lower is better)
Translates to: AQKLHPFPGVGVLFLTLECCTAP*PWGLHS
Trigger: GCTGTGCAGCCCCCAGGGCCACGGGGCAGTGCAGCA...CTCCAAAGTGAGGAACAGAACACCCACCCCCGGGAACGGGTGCAGCTTCTGAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206744.2
CDS-3UTR CCA 90 bp AGGATGGAGAGCCGCACCCTGCCGGAAGCCCTGTTGCTGGTGGTTGGAACCCTGCCGCTGCTCCAGCTCTaGCCTCCGCTGTCCTGCAAG +
Preference number: 4 (lower is better)
Translates to: RMESRTLPEALLLVVGTLPLLQL*PPLSCK
Trigger: CTTGCAGGACAGCGGAGGCCAGAGCTGGAGCAGCGG...CAGGGTTCCAACCACCAGCAACAGGGCTTCCGGCAGGGTGCGGCTCTCCATCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080932.8
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206728.2
ENSMUST00000206744.2
CDS-3UTR CCA 90 bp GAAGGATGGAGAGCCGCACCCTGCCGGAAGCCCTGTTGCTGGTGGTTGGAACCCAACCGGTGGTGGTGGTaGTGGTGCAGCTGTGCGGCC +
Preference number: 4 (lower is better)
Translates to: EGWRAAPCRKPCCWWLEPNRWWW*WCSCAA
Trigger: GGCCGCACAGCTGCACCACCACCACCACCACCGGTT...GGGTTCCAACCACCAGCAACAGGGCTTCCGGCAGGGTGCGGCTCTCCATCCTTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000080932.8
ENSMUST00000205617.2
ENSMUST00000206728.2
CDS-3UTR CCA 90 bp AGCCGCACCCTGCCGGAAGCCCTGTTGCTGGTGGTTGGAACCCTGGTCTTGGAGCAGCTGCAGCTCCCCTaGCTCCAGCTGTTCCCCGTC +
Preference number: 4 (lower is better)
Translates to: SRTLPEALLLVVGTLVLEQLQLP*LQLFPV
Trigger: GACGGGGAACAGCTGGAGCCAGGGGAGCTGCAGCTG...CTCCAAGACCAGGGTTCCAACCACCAGCAACAGGGCTTCCGGCAGGGTGCGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000080932.8
ENSMUST00000205617.2
ENSMUST00000206728.2
CDS-3UTR CCA 90 bp ATGGAGAGCCGCACCCTGCCGGAAGCCCTGTTGCTGGTGGTTGGAACCCTGGTCCAGCTGCAGCTCCCCTaGCTCCAGCTGTTCCCCGTC +
Preference number: 4 (lower is better)
Translates to: MESRTLPEALLLVVGTLVQLQLP*LQLFPV
Trigger: GACGGGGAACAGCTGGAGCCAGGGGAGCTGCAGCTG...GACCAGGGTTCCAACCACCAGCAACAGGGCTTCCGGCAGGGTGCGGCTCTCCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000080932.8
ENSMUST00000205617.2
ENSMUST00000206728.2
CDS-3UTR CCA 90 bp TGGAGAGCCGCACCCTGCCGGAAGCCCTGTTGCTGGTGGTTGGAACCCTGGTCTCCCCCTCTCGCTCCGTaGAGGAGGTGGAATGGCGGT +
Preference number: 4 (lower is better)
Translates to: WRAAPCRKPCCWWLEPWSPPLAP*RRWNGG
Trigger: ACCGCCATTCCACCTCCTCCACGGAGCGAGAGGGGG...AGACCAGGGTTCCAACCACCAGCAACAGGGCTTCCGGCAGGGTGCGGCTCTCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000206728.2
CDS-3UTR TCA 90 bp GATGGAGAGCCGCACCCTGCCGGAAGCCCTGTTGCTGGTGGTTGGAACCCTGGTGGCTGTGGGTCTTGGTaGGCTCCTGCTGCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: DGEPHPAGSPVAGGWNPGGCGSW*APAAAA
Trigger: AGCAGCTGCAGCAGGAGCTCACCAAGACCCACAGCC...ACCAGGGTTCCAACCACCAGCAACAGGGCTTCCGGCAGGGTGCGGCTCTCCATC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080932.8
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206728.2
ENSMUST00000206744.2
CDS-3UTR TCA 90 bp GCCGCACCCTGCCGGAAGCCCTGTTGCTGGTGGTTGGAACCCTGGTCTTGGAGCCCTTGGGCACCGCCCTaGACAGGACAACACCACTCT +
Preference number: 4 (lower is better)
Translates to: AAPCRKPCCWWLEPWSWSPWAPP*TGQHHS
Trigger: AGAGTGGTGTTGTCCTGTTCAGGGCGGTGCCCAAGG...GCTCCAAGACCAGGGTTCCAACCACCAGCAACAGGGCTTCCGGCAGGGTGCGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000080932.8
ENSMUST00000206728.2
CDS-3UTR GCA 90 bp AGAGAGGAATTTGGGCAGGAAGAAGGATGGAGAGCCGCACCCTGCCGGAAGCCCCTGCATCTGCTGCACTaGCCCGTGGCCCTGGGGGCT +
Preference number: 4 (lower is better)
Translates to: REEFGQEEGWRAAPCRKPLHLLH*PVALGA
Trigger: AGCCCCCAGGGCCACGGGGCAGTGCAGCAGATGCAG...GGGCTTCCGGCAGGGTGCGGCTCTCCATCCTTCTTCCTGCCCAAATTCCTCTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000080932.8
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206728.2
ENSMUST00000206744.2
CDS-3UTR GCA 90 bp TTCAGATCTTCTGCATGCTGCCGCAGCACCCGGCTCAAGTTCTCGGTCTGGCTTGGCTGTCGGGGCCGCTaGTCCAGCTCTGGCCTCCGC +
Preference number: 4 (lower is better)
Translates to: FRSSACCRSTRLKFSVWLGCRGR*SSSGLR
Trigger: GCGGAGGCCAGAGCTGGAGCAGCGGCCCCGACAGCC...AAGCCAGACCGAGAACTTGAGCCGGGTGCTGCGGCAGCATGCAGAAGATCTGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000206539.2
CDS-3UTR GCA 90 bp GCCGCACCCTGCCGGAAGCCCTGTTGCTGGTGGTTGGAACCCTGGTCTTGGAGCGTCAACTCGTTCAGCTaGAGCTCCCCTGGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: AAPCRKPCCWWLEPWSWSVNSFS*SSPGSS
Trigger: GCTGGAGCCAGGGGAGCTGCAGCTGAACGAGTTGAC...GCTCCAAGACCAGGGTTCCAACCACCAGCAACAGGGCTTCCGGCAGGGTGCGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000080932.8
ENSMUST00000205617.2
ENSMUST00000206728.2
CDS-3UTR CCA 90 bp AGCCGCACCCTGCCGGAAGCCCTGTTGCTGGTGGTTGGAACCCTGGTCTTGGAGATCTCTGCCCAGGACTaGCTGACAGGGCTGTCGGGG +
Preference number: 4 (lower is better)
Translates to: SRTLPEALLLVVGTLVLEISAQD*LTGLSG
Trigger: CCCCGACAGCCCTGTCAGCCAGTCCTGGGCAGAGAT...CTCCAAGACCAGGGTTCCAACCACCAGCAACAGGGCTTCCGGCAGGGTGCGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080932.8
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206728.2
ENSMUST00000206744.2
CDS-3UTR CCA 90 bp AGGATGGAGAGCCGCACCCTGCCGGAAGCCCTGTTGCTGGTGGTTGGAACCCTGATCTCTGCCCAGGACTaGCTGACAGGGCTGTCGGGG +
Preference number: 4 (lower is better)
Translates to: RMESRTLPEALLLVVGTLISAQD*LTGLSG
Trigger: CCCCGACAGCCCTGTCAGCCAGTCCTGGGCAGAGAT...CAGGGTTCCAACCACCAGCAACAGGGCTTCCGGCAGGGTGCGGCTCTCCATCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080932.8
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206728.2
ENSMUST00000206744.2
CDS-3UTR CCA 90 bp GAGCCGCACCCTGCCGGAAGCCCTGTTGCTGGTGGTTGGAACCCTGGTCTTGGAATCTCTGCCCAGGACTaGCTGACAGGGCTGTCGGGG +
Preference number: 4 (lower is better)
Translates to: EPHPAGSPVAGGWNPGLGISAQD*LTGLSG
Trigger: CCCCGACAGCCCTGTCAGCCAGTCCTGGGCAGAGAT...TCCAAGACCAGGGTTCCAACCACCAGCAACAGGGCTTCCGGCAGGGTGCGGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080932.8
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206728.2
ENSMUST00000206744.2
CDS-3UTR CCA 90 bp AGAGGAATTTGGGCAGGAAGAAGGATGGAGAGCCGCACCCTGCCGGAAGCCCTGCGGTGGTGGTGGTGGTaGTGCAGCTGTGCGGCCCTC +
Preference number: 4 (lower is better)
Translates to: RGIWAGRRMESRTLPEALRWWWW*CSCAAL
Trigger: GAGGGCCGCACAGCTGCACCACCACCACCACCACCG...CAGGGCTTCCGGCAGGGTGCGGCTCTCCATCCTTCTTCCTGCCCAAATTCCTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000080932.8
ENSMUST00000205617.2
ENSMUST00000206728.2
CDS-3UTR CCA 90 bp GAAGGATGGAGAGCCGCACCCTGCCGGAAGCCCTGTTGCTGGTGGTTGGAACCCGGCAGCATGAACCGGTaGTGGTGGTGGTGGTGCAGC +
Preference number: 4 (lower is better)
Translates to: EGWRAAPCRKPCCWWLEPGSMNR*WWWWCS
Trigger: GCTGCACCACCACCACCACCACCGGTTCATGCTGCC...GGGTTCCAACCACCAGCAACAGGGCTTCCGGCAGGGTGCGGCTCTCCATCCTTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000080932.8
ENSMUST00000205617.2
ENSMUST00000206728.2
CDS-3UTR CCA 90 bp GAGGAGGTACACGCTCGCCTCCGGGTCTCACCGATGCCGCTTGCGGATACTGTGAGAGCCAACCTAGCCTaGCCACCTGGCCAAGGGCTC +
Preference number: 4 (lower is better)
Translates to: EEVHARLRVSPMPLADTVRANLA*PPGQGL
Trigger: GAGCCCTTGGCCAGGTGGCCAGGCTAGGTTGGCTCT...CACAGTATCCGCAAGCGGCATCGGTGAGACCCGGAGGCGAGCGTGTACCTCCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000205617.2
CDS-3UTR TCA 90 bp AGCAGTGAGTGGGAACTGCTGAGGAGGTACACGCTCGCCTCCGGGTCTCACCGAGGCTGTGGGTCTTGGTaGGCTCCTGCTGCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: SSEWELLRRYTLASGSHRGCGSW*APAAAA
Trigger: AGCAGCTGCAGCAGGAGCTCACCAAGACCCACAGCC...TCGGTGAGACCCGGAGGCGAGCGTGTACCTCCTCAGCAGTTCCCACTCACTGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206744.2
CDS-3UTR TCA 90 bp AAGGATGGAGAGCCGCACCCTGCCGGAAGCCCTGTTGCTGGTGGTTGGAACCCTGGCTGTGGGTCTTGGTaGGCTCCTGCTGCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: KDGEPHPAGSPVAGGWNPGCGSW*APAAAA
Trigger: AGCAGCTGCAGCAGGAGCTCACCAAGACCCACAGCC...AGGGTTCCAACCACCAGCAACAGGGCTTCCGGCAGGGTGCGGCTCTCCATCCTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080932.8
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206728.2
ENSMUST00000206744.2
CDS-3UTR TCA 90 bp GCCTCCGGGTCTCACCGATGCCGCTTGCGGATACTGTGGAGCTCCTGGCAGATGGCAGCCAGCTCACGGTaGATGGATGCCACATCGTCC +
Preference number: 4 (lower is better)
Translates to: ASGSHRCRLRILWSSWQMAASSR*MDATSS
Trigger: GGACGATGTGGCATCCATTCACCGTGAGCTGGCTGC...CATCTGCCAGGAGCTCCACAGTATCCGCAAGCGGCATCGGTGAGACCCGGAGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000205617.2
CDS-3UTR TCA 90 bp GATGGAGAGCCGCACCCTGCCGGAAGCCCTGTTGCTGGTGGTTGGAACCCTGGTCCTTGGGCACCGCCCTaGACAGGACAACACCACTCT +
Preference number: 4 (lower is better)
Translates to: DGEPHPAGSPVAGGWNPGPWAPP*TGQHHS
Trigger: AGAGTGGTGTTGTCCTGTTCAGGGCGGTGCCCAAGG...ACCAGGGTTCCAACCACCAGCAACAGGGCTTCCGGCAGGGTGCGGCTCTCCATC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000080932.8
ENSMUST00000206728.2
CDS-3UTR TCA 90 bp GGAGAGCCGCACCCTGCCGGAAGCCCTGTTGCTGGTGGTTGGAACCCTGGTCTTTTGTCTGAGGCCCGCTaGGGCGGCATAGATCCCATC +
Preference number: 4 (lower is better)
Translates to: GEPHPAGSPVAGGWNPGLLSEAR*GGIDPI
Trigger: GATGGGATCTATGCCGCCTCAGCGGGCCTCAGACAA...AAGACCAGGGTTCCAACCACCAGCAACAGGGCTTCCGGCAGGGTGCGGCTCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000080932.8
ENSMUST00000206728.2
ENSMUST00000206735.2
CDS-3UTR TCA 90 bp TGCACCTCCGGCACGAGCTGCAGTGGTGGAGGGATAGAGAACTTGGGGCGGAAGCCAAGGGCAGGAGAATaGAAGCTGGGCCCCCACCAC +
Preference number: 4 (lower is better)
Translates to: CTSGTSCSGGGIENLGRKPRAGE*KLGPHH
Trigger: GTGGTGGGGGCCCAGCTTTCATTCTCCTGCCCTTGG...CTTCCGCCCCAAGTTCTCTATCCCTCCACCACTGCAGCTCGTGCCGGAGGTGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000205617.2
CDS-3UTR GCA 90 bp AGAGAGGAATTTGGGCAGGAAGAAGGATGGAGAGCCGCACCCTGCCGGAAGCCCGCTTCCTGCATCTGCTaGACTGCCCCGTGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: REEFGQEEGWRAAPCRKPASCIC*TAPWPW
Trigger: CCAGGGCCACGGGGCAGTGCAGCAGATGCAGGAAGC...GGGCTTCCGGCAGGGTGCGGCTCTCCATCCTTCTTCCTGCCCAAATTCCTCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080932.8
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206728.2
ENSMUST00000206744.2
CDS-3UTR GCA 90 bp GCTCAGAAGCTGCACCCGTTCCCGGGGGTGGGTGTTCTGTTCCTCACTTTGGAGGCTTCCTGCATCTGCTaGACTGCCCCGTGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: AQKLHPFPGVGVLFLTLEASCIC*TAPWPW
Trigger: CCAGGGCCACGGGGCAGTGCAGCAGATGCAGGAAGC...CTCCAAAGTGAGGAACAGAACACCCACCCCCGGGAACGGGTGCAGCTTCTGAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206744.2
CDS-3UTR GCA 90 bp AAGGATGGAGAGCCGCACCCTGCCGGAAGCCCTGTTGCTGGTGGTTGGAACCCTCGCAGCTCAGCTTCCTaGATCTGCTGCACTGCCCCG +
Preference number: 4 (lower is better)
Translates to: KDGEPHPAGSPVAGGWNPRSSAS*ICCTAP
Trigger: CGGGGCAGTGCAGCAGATGCAGGAAGCTGAGCTGCG...AGGGTTCCAACCACCAGCAACAGGGCTTCCGGCAGGGTGCGGCTCTCCATCCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080932.8
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206728.2
ENSMUST00000206744.2
CDS-3UTR GCA 90 bp GAAGGAGCGGCACGGCTGGGGGCTCGCCCGTGCCGAGCTGCTCCATCTTGCTCTCCATCCACTTCCTCATaGCCTCCAATAAGCGCAGCT +
Preference number: 4 (lower is better)
Translates to: EGAARLGARPCRAAPSCSPSTSS*PPISAA
Trigger: AGCTGCGCTTATTGGAGGGCATGAGGAAGTGGATGG...AGAGCAAGATGGAGCAGCTCGGCACGGGCGAGCCCCCAGCCGTGCCGCTCCTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206744.2
CDS-3UTR GCA 90 bp GCCGCACCCTGCCGGAAGCCCTGTTGCTGGTGGTTGGAACCCTGGTCTTGGAGCCGAGTTCAGATCTTCTaGATGCTGCCGCAGCACCCG +
Preference number: 4 (lower is better)
Translates to: AAPCRKPCCWWLEPWSWSRVQIF*MLPQHP
Trigger: CGGGTGCTGCGGCAGCATGCAGAAGATCTGAACTCG...GCTCCAAGACCAGGGTTCCAACCACCAGCAACAGGGCTTCCGGCAGGGTGCGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080932.8
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206728.2
ENSMUST00000206744.2
CDS-3UTR GCA 90 bp CACGCTCGCCTCCGGGTCTCACCGATGCCGCTTGCGGATACTGTGGAGCTCCTGCGAGTTCAGATCTTCTaGATGCTGCCGCAGCACCCG +
Preference number: 4 (lower is better)
Translates to: HARLRVSPMPLADTVELLRVQIF*MLPQHP
Trigger: CGGGTGCTGCGGCAGCATGCAGAAGATCTGAACTCG...CAGGAGCTCCACAGTATCCGCAAGCGGCATCGGTGAGACCCGGAGGCGAGCGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206744.2
CDS-3UTR GCA 90 bp GGATGGAGAGCCGCACCCTGCCGGAAGCCCTGTTGCTGGTGGTTGGAACCCTGGAGCTCCTGCTGCAGCTaGTGCCACTGCTCGTTGTAC +
Preference number: 4 (lower is better)
Translates to: GWRAAPCRKPCCWWLEPWSSCCS*CHCSLY
Trigger: GTACAACGAGCAGTGGCAGCAGCTGCAGCAGGAGCT...CCAGGGTTCCAACCACCAGCAACAGGGCTTCCGGCAGGGTGCGGCTCTCCATCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080932.8
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206728.2
ENSMUST00000206744.2
CDS-3UTR GCA 90 bp GCCGCACCCTGCCGGAAGCCCTGTTGCTGGTGGTTGGAACCCTGGTCTTGGAGCAGCTCCTGCTGCAGCTaGTGCCACTGCTCGTTGTAC +
Preference number: 4 (lower is better)
Translates to: AAPCRKPCCWWLEPWSWSSSCCS*CHCSLY
Trigger: GTACAACGAGCAGTGGCAGCAGCTGCAGCAGGAGCT...GCTCCAAGACCAGGGTTCCAACCACCAGCAACAGGGCTTCCGGCAGGGTGCGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080932.8
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206728.2
ENSMUST00000206744.2
CDS-3UTR GCA 90 bp GGAGAGCCGCACCCTGCCGGAAGCCCTGTTGCTGGTGGTTGGAACCCTGGTCTTTTGGTGAGCTCCTGCTaGAGCTGCTGCCACTGCTCG +
Preference number: 4 (lower is better)
Translates to: GEPHPAGSPVAGGWNPGLLVSSC*SCCHCS
Trigger: CGAGCAGTGGCAGCAGCTGCAGCAGGAGCTCACCAA...AAGACCAGGGTTCCAACCACCAGCAACAGGGCTTCCGGCAGGGTGCGGCTCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080932.8
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206728.2
ENSMUST00000206744.2
CDS-3UTR GCA 90 bp AGCCGCACCCTGCCGGAAGCCCTGTTGCTGGTGGTTGGAACCCTGGTCTTGGAGGTCAACTCGTTCAGCTaGAGCTCCCCTGGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: SRTLPEALLLVVGTLVLEVNSFS*SSPGSS
Trigger: GCTGGAGCCAGGGGAGCTGCAGCTGAACGAGTTGAC...CTCCAAGACCAGGGTTCCAACCACCAGCAACAGGGCTTCCGGCAGGGTGCGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000080932.8
ENSMUST00000205617.2
ENSMUST00000206728.2
CDS-3UTR GCA 90 bp GGCAGGAAGAAGGATGGAGAGCCGCACCCTGCCGGAAGCCCTGTTGCTGGTGGTTTCCCCCTTCCGATCTaGTCTCCCAGCACCAGGTCC +
Preference number: 4 (lower is better)
Translates to: GRKKDGEPHPAGSPVAGGFPLPI*SPSTRS
Trigger: GGACCTGGTGCTGGGAGAGCAGATCGGAAGGGGGAA...ACCACCAGCAACAGGGCTTCCGGCAGGGTGCGGCTCTCCATCCTTCTTCCTGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000080932.8
ENSMUST00000206728.2
CDS-3UTR GCA 90 bp AGGATGGAGAGCCGCACCCTGCCGGAAGCCCTGTTGCTGGTGGTTGGAACCCTGGCGTCCCCTACCATCTaGAGCAGAGTCTTCACCCGC +
Preference number: 4 (lower is better)
Translates to: RMESRTLPEALLLVVGTLASPTI*SRVFTR
Trigger: GCGGGTGAAGACTCTGCTGCAGATGGTAGGGGACGC...CAGGGTTCCAACCACCAGCAACAGGGCTTCCGGCAGGGTGCGGCTCTCCATCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000080932.8
ENSMUST00000206728.2
CDS-3UTR GCA 90 bp AGCCGCACCCTGCCGGAAGCCCTGTTGCTGGTGGTTGGAACCCTGGTCTTGGAGGCGTCCCCTACCATCTaGAGCAGAGTCTTCACCCGC +
Preference number: 4 (lower is better)
Translates to: SRTLPEALLLVVGTLVLEASPTI*SRVFTR
Trigger: GCGGGTGAAGACTCTGCTGCAGATGGTAGGGGACGC...CTCCAAGACCAGGGTTCCAACCACCAGCAACAGGGCTTCCGGCAGGGTGCGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000080932.8
ENSMUST00000206728.2
CDS-3UTR CCA 90 bp GTCTTGGAGCTGTCCAGCAGTGAGTGGGAACTGCTGAGGAGGTACACGCTCGCCACTGCCCCGTGGCCCTaGGGGCTGCACAGCTCTGAA +
Preference number: 4 (lower is better)
Translates to: VLELSSSEWELLRRYTLATAPWP*GLHSSE
Trigger: TTCAGAGCTGTGCAGCCCCCAGGGCCACGGGGCAGT...GGCGAGCGTGTACCTCCTCAGCAGTTCCCACTCACTGCTGGACAGCTCCAAGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000080932.8
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206728.2
ENSMUST00000206744.2
CDS-3UTR CCA 90 bp CCCTGGCTCTCCCGAACCAGGAAGTCCCCGGAGTGTGTTAGCAGCTCAGCTACCATCTCTGCCCAGGACTaGCTGACAGGGCTGTCGGGG +
Preference number: 4 (lower is better)
Translates to: PWLSRTRKSPECVSSSATISAQD*LTGLSG
Trigger: CCCCGACAGCCCTGTCAGCCAGTCCTGGGCAGAGAT...GGTAGCTGAGCTGCTAACACACTCCGGGGACTTCCTGGTTCGGGAGAGCCAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206744.2
CDS-3UTR CCA 90 bp GCCGCACCCTGCCGGAAGCCCTGTTGCTGGTGGTTGGAACCCTGGTCTTGGAGCAGCATGAACCGGTGGTaGTGGTGGTGGTGCAGCTGT +
Preference number: 4 (lower is better)
Translates to: AAPCRKPCCWWLEPWSWSSMNRW*WWWCSC
Trigger: ACAGCTGCACCACCACCACCACCACCGGTTCATGCT...GCTCCAAGACCAGGGTTCCAACCACCAGCAACAGGGCTTCCGGCAGGGTGCGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000080932.8
ENSMUST00000205617.2
ENSMUST00000206728.2
CDS-3UTR CCA 90 bp AAGGATGGAGAGCCGCACCCTGCCGGAAGCCCTGTTGCTGGTGGTTGGAACCCTCTCGCTCCTGCTCCGTaGAGGAGGTGGAATGGCGGT +
Preference number: 4 (lower is better)
Translates to: KDGEPHPAGSPVAGGWNPLAPAP*RRWNGG
Trigger: ACCGCCATTCCACCTCCTCCACGGAGCAGGAGCGAG...AGGGTTCCAACCACCAGCAACAGGGCTTCCGGCAGGGTGCGGCTCTCCATCCTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080932.8
CDS-3UTR CCA 90 bp AGCCGCACCCTGCCGGAAGCCCTGTTGCTGGTGGTTGGAACCCTGGTCTTGGAGATCAGGGCACAGCTCTaGGCAAGGCAGACGATGCCC +
Preference number: 4 (lower is better)
Translates to: SRTLPEALLLVVGTLVLEIRAQL*ARQTMP
Trigger: GGGCATCGTCTGCCTTGCCCAGAGCTGTGCCCTGAT...CTCCAAGACCAGGGTTCCAACCACCAGCAACAGGGCTTCCGGCAGGGTGCGGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000080932.8
ENSMUST00000206728.2
CDS-3UTR CCA 90 bp GGAGAGCCGCACCCTGCCGGAAGCCCTGTTGCTGGTGGTTGGAACCCTGGTCTTATCAGGGCACAGCTCTaGGCAAGGCAGACGATGCCC +
Preference number: 4 (lower is better)
Translates to: GEPHPAGSPVAGGWNPGLIRAQL*ARQTMP
Trigger: GGGCATCGTCTGCCTTGCCCAGAGCTGTGCCCTGAT...AAGACCAGGGTTCCAACCACCAGCAACAGGGCTTCCGGCAGGGTGCGGCTCTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000080932.8
ENSMUST00000206728.2
CDS-3UTR TCA 90 bp AGAGAGGAATTTGGGCAGGAAGAAGGATGGAGAGCCGCACCCTGCCGGAAGCCCGGCTGTGGGTCTTGGTaGGCTCCTGCTGCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: REEFGQEEGWRAAPCRKPGCGSW*APAAAA
Trigger: AGCAGCTGCAGCAGGAGCTCACCAAGACCCACAGCC...GGGCTTCCGGCAGGGTGCGGCTCTCCATCCTTCTTCCTGCCCAAATTCCTCTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080932.8
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206728.2
ENSMUST00000206744.2
CDS-3UTR TCA 90 bp ACCCTGCCGGAAGCCCTGTTGCTGGTGGTTGGAACCCTGGTCTTGGAGCTGTCCGTGCAAATCCTGCAGTaGCTGCAGCAGGCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: TLPEALLLVVGTLVLELSVQILQ*LQQARQ
Trigger: CTGCCTGGCCTGCTGCAGTCACTGCAGGATTTGCAC...GGACAGCTCCAAGACCAGGGTTCCAACCACCAGCAACAGGGCTTCCGGCAGGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000080932.8
ENSMUST00000205617.2
ENSMUST00000206728.2
CDS-3UTR TCA 90 bp CACCCTGCCGGAAGCCCTGTTGCTGGTGGTTGGAACCCTGGTCTTGGAGCTGTCGCAGCCAGCTCACGGTaGATGGATGCCACATCGTCC +
Preference number: 4 (lower is better)
Translates to: HPAGSPVAGGWNPGLGAVAASSR*MDATSS
Trigger: GGACGATGTGGCATCCATTCACCGTGAGCTGGCTGC...GACAGCTCCAAGACCAGGGTTCCAACCACCAGCAACAGGGCTTCCGGCAGGGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000080932.8
ENSMUST00000205617.2
ENSMUST00000206728.2
CDS-3UTR TCA 90 bp CCCTGCCGGAAGCCCTGTTGCTGGTGGTTGGAACCCTGGTCTTGGAGCTGTCCATTGTCTGAGGCCCGCTaGGGCGGCATAGATCCCATC +
Preference number: 4 (lower is better)
Translates to: PCRKPCCWWLEPWSWSCPLSEAR*GGIDPI
Trigger: GATGGGATCTATGCCGCCTCAGCGGGCCTCAGACAA...TGGACAGCTCCAAGACCAGGGTTCCAACCACCAGCAACAGGGCTTCCGGCAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000080932.8
ENSMUST00000206728.2
ENSMUST00000206735.2
CDS-3UTR TCA 90 bp AAGGATGGAGAGCCGCACCCTGCCGGAAGCCCTGTTGCTGGTGGTTGGAACCCTGTGAGGCCCCCAGGCTaGAGGTCTCCCACAGCAAAA +
Preference number: 4 (lower is better)
Translates to: KDGEPHPAGSPVAGGWNPVRPPG*RSPTAK
Trigger: TTTTGCTGTGGGAGACCTTCAGCCTGGGGGCCTCAC...AGGGTTCCAACCACCAGCAACAGGGCTTCCGGCAGGGTGCGGCTCTCCATCCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000080932.8
ENSMUST00000206728.2
CDS-3UTR GCA 90 bp CTAAGAGAGGAATTTGGGCAGGAAGAAGGATGGAGAGCCGCACCCTGCCGGAAGCTGCATCTGCTGCACTaGCCCGTGGCCCTGGGGGCT +
Preference number: 4 (lower is better)
Translates to: LREEFGQEEGWRAAPCRKLHLLH*PVALGA
Trigger: AGCCCCCAGGGCCACGGGGCAGTGCAGCAGATGCAG...CTTCCGGCAGGGTGCGGCTCTCCATCCTTCTTCCTGCCCAAATTCCTCTCTTAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000080932.8
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206728.2
ENSMUST00000206744.2
CDS-3UTR GCA 90 bp AGAGGAATTTGGGCAGGAAGAAGGATGGAGAGCCGCACCCTGCCGGAAGCCCTGCGCAGCTCAGCTTCCTaGATCTGCTGCACTGCCCCG +
Preference number: 4 (lower is better)
Translates to: RGIWAGRRMESRTLPEALRSSAS*ICCTAP
Trigger: CGGGGCAGTGCAGCAGATGCAGGAAGCTGAGCTGCG...CAGGGCTTCCGGCAGGGTGCGGCTCTCCATCCTTCTTCCTGCCCAAATTCCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080932.8
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206728.2
ENSMUST00000206744.2
CDS-3UTR GCA 90 bp GTCTTGGAGCTGTCCAGCAGTGAGTGGGAACTGCTGAGGAGGTACACGCTCGCCCGCAGCTCAGCTTCCTaGATCTGCTGCACTGCCCCG +
Preference number: 4 (lower is better)
Translates to: VLELSSSEWELLRRYTLARSSAS*ICCTAP
Trigger: CGGGGCAGTGCAGCAGATGCAGGAAGCTGAGCTGCG...GGCGAGCGTGTACCTCCTCAGCAGTTCCCACTCACTGCTGGACAGCTCCAAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080932.8
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206728.2
ENSMUST00000206744.2
CDS-3UTR GCA 90 bp GGGTCTCACCGATGCCGCTTGCGGATACTGTGGAGCTCCTGGCAGATGATGCTGCGCAGCTCAGCTTCCTaGATCTGCTGCACTGCCCCG +
Preference number: 4 (lower is better)
Translates to: GSHRCRLRILWSSWQMMLRSSAS*ICCTAP
Trigger: CGGGGCAGTGCAGCAGATGCAGGAAGCTGAGCTGCG...CAGCATCATCTGCCAGGAGCTCCACAGTATCCGCAAGCGGCATCGGTGAGACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206744.2
CDS-3UTR GCA 90 bp GGAGAGCCGCACCCTGCCGGAAGCCCTGTTGCTGGTGGTTGGAACCCTGGTCTTCGAGTTCAGATCTTCTaGATGCTGCCGCAGCACCCG +
Preference number: 4 (lower is better)
Translates to: GEPHPAGSPVAGGWNPGLRVQIF*MLPQHP
Trigger: CGGGTGCTGCGGCAGCATGCAGAAGATCTGAACTCG...AAGACCAGGGTTCCAACCACCAGCAACAGGGCTTCCGGCAGGGTGCGGCTCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080932.8
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206728.2
ENSMUST00000206744.2
CDS-3UTR GCA 90 bp GAGCCGCACCCTGCCGGAAGCCCTGTTGCTGGTGGTTGGAACCCTGGTCTTGGAAGCTCCTGCTGCAGCTaGTGCCACTGCTCGTTGTAC +
Preference number: 4 (lower is better)
Translates to: EPHPAGSPVAGGWNPGLGSSCCS*CHCSLY
Trigger: GTACAACGAGCAGTGGCAGCAGCTGCAGCAGGAGCT...TCCAAGACCAGGGTTCCAACCACCAGCAACAGGGCTTCCGGCAGGGTGCGGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080932.8
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206728.2
ENSMUST00000206744.2
CDS-3UTR GCA 90 bp TGCCTAAGAGAGGAATTTGGGCAGGAAGAAGGATGGAGAGCCGCACCCTGCCGGGTGGTGGTGCAGCTGTaGGGCCCTCACACCCAGGAC +
Preference number: 4 (lower is better)
Translates to: CLREEFGQEEGWRAAPCRVVVQL*GPHTQD
Trigger: GTCCTGGGTGTGAGGGCCGCACAGCTGCACCACCAC...CCGGCAGGGTGCGGCTCTCCATCCTTCTTCCTGCCCAAATTCCTCTCTTAGGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000080932.8
ENSMUST00000205617.2
ENSMUST00000206728.2
CDS-3UTR GCA 90 bp CCAGAAGGCTGGCGAGTCCCTGGGCCGTGGGCTGCACTTACCCTTCCGATCTGCTCCTCGTGCAAATCCTaGAGTGACTGCAGCAGGCCA +
Preference number: 4 (lower is better)
Translates to: PEGWRVPGPWAALTLPICSSCKS*SDCSRP
Trigger: TGGCCTGCTGCAGTCACTGCAGGATTTGCACGAGGA...GCAGATCGGAAGGGTAAGTGCAGCCCACGGCCCAGGGACTCGCCAGCCTTCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000205617.2
CDS-3UTR GCA 90 bp AAGGATGGAGAGCCGCACCCTGCCGGAAGCCCTGTTGCTGGTGGTTGGAACCCTGTCAACTCGTTCAGCTaGAGCTCCCCTGGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: KDGEPHPAGSPVAGGWNPVNSFS*SSPGSS
Trigger: GCTGGAGCCAGGGGAGCTGCAGCTGAACGAGTTGAC...AGGGTTCCAACCACCAGCAACAGGGCTTCCGGCAGGGTGCGGCTCTCCATCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000080932.8
ENSMUST00000205617.2
ENSMUST00000206728.2
CDS-3UTR GCA 90 bp GGATGGAGAGCCGCACCCTGCCGGAAGCCCTGTTGCTGGTGGTTGGAACCCTGGGACAGTACATACTCCTaGTTGCCCTGGCTCTCCCGA +
Preference number: 4 (lower is better)
Translates to: GWRAAPCRKPCCWWLEPWDSTYS*LPWLSR
Trigger: TCGGGAGAGCCAGGGCAAGCAGGAGTATGTACTGTC...CCAGGGTTCCAACCACCAGCAACAGGGCTTCCGGCAGGGTGCGGCTCTCCATCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000080932.8
ENSMUST00000206728.2
CDS-3UTR GCA 90 bp CGCTCCCGGATCAGCACGCTCAGTTTGCTCAAGGGCCCCGAGTTCAGATCTTCTCCTTTCTCGGGCAGCTaGTCCTGGGGTAGGTGGCGG +
Preference number: 4 (lower is better)
Translates to: RSRISTLSLLKGPEFRSSPFSGS*SWGRWR
Trigger: CCGCCACCTACCCCAGGAGCAGCTGCCCGAGAAAGG...AGAAGATCTGAACTCGGGGCCCTTGAGCAAACTGAGCGTGCTGATCCGGGAGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000206539.2
CDS-3UTR CCA 90 bp TGCCTAAGAGAGGAATTTGGGCAGGAAGAAGGATGGAGAGCCGCACCCTGCCGGCCGCTGCTCCAGCTCTaGCCTCCGCTGTCCTGCAAG +
Preference number: 4 (lower is better)
Translates to: CLREEFGQEEGWRAAPCRPLLQL*PPLSCK
Trigger: CTTGCAGGACAGCGGAGGCCAGAGCTGGAGCAGCGG...CCGGCAGGGTGCGGCTCTCCATCCTTCTTCCTGCCCAAATTCCTCTCTTAGGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080932.8
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206728.2
ENSMUST00000206744.2
CDS-3UTR CCA 90 bp GTTGGAACCCTGGTCTTGGAGCTGTCCAGCAGTGAGTGGGAACTGCTGAGGAGGAACCGGTGGTGGTGGTaGTGGTGCAGCTGTGCGGCC +
Preference number: 4 (lower is better)
Translates to: VGTLVLELSSSEWELLRRNRWWW*WCSCAA
Trigger: GGCCGCACAGCTGCACCACCACCACCACCACCGGTT...CCTCCTCAGCAGTTCCCACTCACTGCTGGACAGCTCCAAGACCAGGGTTCCAAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000080932.8
ENSMUST00000205617.2
ENSMUST00000206728.2
CDS-3UTR CCA 90 bp CCGATCTGCTCTCCCAGCACCAGGTCCTCGTGCTTCAGAACCCACTTGTCCTTGAACCGGTGGTGGTGGTaGTGGTGCAGCTGTGCGGCC +
Preference number: 4 (lower is better)
Translates to: PICSPSTRSSCFRTHLSLNRWWW*WCSCAA
Trigger: GGCCGCACAGCTGCACCACCACCACCACCACCGGTT...CAAGGACAAGTGGGTTCTGAAGCACGAGGACCTGGTGCTGGGAGAGCAGATCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000205617.2
CDS-3UTR CCA 90 bp GAGCCGCACCCTGCCGGAAGCCCTGTTGCTGGTGGTTGGAACCCTGGTCTTGGAAGCATGAACCGGTGGTaGTGGTGGTGGTGCAGCTGT +
Preference number: 4 (lower is better)
Translates to: EPHPAGSPVAGGWNPGLGSMNRW*WWWCSC
Trigger: ACAGCTGCACCACCACCACCACCACCGGTTCATGCT...TCCAAGACCAGGGTTCCAACCACCAGCAACAGGGCTTCCGGCAGGGTGCGGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000080932.8
ENSMUST00000205617.2
ENSMUST00000206728.2
CDS-3UTR CCA 90 bp CACGCTCGCCTCCGGGTCTCACCGATGCCGCTTGCGGATACTGTGGAGCTCCTGCCAGCTCACGGTGAATaGATGCCACATCGTCCTGCA +
Preference number: 4 (lower is better)
Translates to: HARLRVSPMPLADTVELLPAHGE*MPHRPA
Trigger: TGCAGGACGATGTGGCATCCATTCACCGTGAGCTGG...CAGGAGCTCCACAGTATCCGCAAGCGGCATCGGTGAGACCCGGAGGCGAGCGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000205617.2
CDS-3UTR CCA 90 bp TGCCTAAGAGAGGAATTTGGGCAGGAAGAAGGATGGAGAGCCGCACCCTGCCGGCAGCTGCAGCTCCCCTaGCTCCAGCTGTTCCCCGTC +
Preference number: 4 (lower is better)
Translates to: CLREEFGQEEGWRAAPCRQLQLP*LQLFPV
Trigger: GACGGGGAACAGCTGGAGCCAGGGGAGCTGCAGCTG...CCGGCAGGGTGCGGCTCTCCATCCTTCTTCCTGCCCAAATTCCTCTCTTAGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000080932.8
ENSMUST00000205617.2
ENSMUST00000206728.2
3UTR CAA 72 bp AGAAGGATGGAGAGCCGCACCCTGCCGGAAGCCCTGTaGCTGGTGGTTGGAACCCTGGTCTTGGAGCTGTCC +
Preference number: 4 (lower is better)
Translates to: RRMESRTLPEAL*LVVGTLVLELS
Trigger: GGACAGCTCCAAGACCAGGGTTCCAACCACCAGCAACAGGGCTTCCGGCAGGGTGCGGCTCTCCATCCTTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000080932.8
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206728.2
ENSMUST00000206735.2
ENSMUST00000206744.2
3UTR CAA 72 bp AGGTACACGCTCGCCTCCGGGTCTCACCGATGCCGCTaGCGGATACTGTGGAGCTCCTGGCAGATGATGCTG +
Preference number: 4 (lower is better)
Translates to: RYTLASGSHRCR*RILWSSWQMML
Trigger: CAGCATCATCTGCCAGGAGCTCCACAGTATCCGCAAGCGGCATCGGTGAGACCCGGAGGCGAGCGTGTACCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206735.2
ENSMUST00000206744.2
CDS-3UTR TCA 90 bp AGAAGGATGGAGAGCCGCACCCTGCCGGAAGCCCTGTTGCTGGTGGTTGGAACCATTCCCGGTCACTCTTaGCCCTCTGGGCCATCCACT +
Preference number: 4 (lower is better)
Translates to: RRMESRTLPEALLLVVGTIPGHS*PSGPST
Trigger: AGTGGATGGCCCAGAGGGTCAAGAGTGACCGGGAAT...GGTTCCAACCACCAGCAACAGGGCTTCCGGCAGGGTGCGGCTCTCCATCCTTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080932.8
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206728.2
ENSMUST00000206744.2
CDS-3UTR TCA 90 bp ACCCTGCCGGAAGCCCTGTTGCTGGTGGTTGGAACCCTGGTCTTGGAGCTGTCCATTCCCGGTCACTCTTaGCCCTCTGGGCCATCCACT +
Preference number: 4 (lower is better)
Translates to: TLPEALLLVVGTLVLELSIPGHS*PSGPST
Trigger: AGTGGATGGCCCAGAGGGTCAAGAGTGACCGGGAAT...GGACAGCTCCAAGACCAGGGTTCCAACCACCAGCAACAGGGCTTCCGGCAGGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080932.8
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206728.2
ENSMUST00000206744.2
CDS-3UTR TCA 90 bp GGATGGAGAGCCGCACCCTGCCGGAAGCCCTGTTGCTGGTGGTTGGAACCCTGGACCAGGGTCCGGTACTaGGTCTTCAGCTTCTCAATG +
Preference number: 4 (lower is better)
Translates to: GWRAAPCRKPCCWWLEPWTRVRY*VFSFSM
Trigger: CATTGAGAAGCTGAAGACTCAGTACCGGACCCTGGT...CCAGGGTTCCAACCACCAGCAACAGGGCTTCCGGCAGGGTGCGGCTCTCCATCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080932.8
ENSMUST00000205617.2
ENSMUST00000206728.2
ENSMUST00000206744.2
CDS-3UTR TCA 90 bp GGAATTTGGGCAGGAAGAAGGATGGAGAGCCGCACCCTGCCGGAAGCCCTGTTGGTGCAAATCCTGCAGTaGCTGCAGCAGGCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: GIWAGRRMESRTLPEALLVQILQ*LQQARQ
Trigger: CTGCCTGGCCTGCTGCAGTCACTGCAGGATTTGCAC...CAACAGGGCTTCCGGCAGGGTGCGGCTCTCCATCCTTCTTCCTGCCCAAATTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000080932.8
ENSMUST00000205617.2
ENSMUST00000206728.2
CDS-3UTR TCA 90 bp GTCTTGGAGCTGTCCAGCAGTGAGTGGGAACTGCTGAGGAGGTACACGCTCGCCGCAGCCAGCTCACGGTaGATGGATGCCACATCGTCC +
Preference number: 4 (lower is better)
Translates to: VLELSSSEWELLRRYTLAAASSR*MDATSS
Trigger: GGACGATGTGGCATCCATTCACCGTGAGCTGGCTGC...GGCGAGCGTGTACCTCCTCAGCAGTTCCCACTCACTGCTGGACAGCTCCAAGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000080932.8
ENSMUST00000205617.2
ENSMUST00000206728.2
CDS-3UTR TCA 90 bp CCGCACCCTGCCGGAAGCCCTGTTGCTGGTGGTTGGAACCCTGGTCTTGGAGCTTGGGAGGACAGCAGGTaGGTGATGAGCAGAGGTATG +
Preference number: 4 (lower is better)
Translates to: PHPAGSPVAGGWNPGLGAWEDSR*VMSRGM
Trigger: CATACCTCTGCTCATCACTCACCTGCTGTCCTCCCA...AGCTCCAAGACCAGGGTTCCAACCACCAGCAACAGGGCTTCCGGCAGGGTGCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000080932.8
ENSMUST00000206728.2
CDS-3UTR TCA 90 bp AGCCGCACCCTGCCGGAAGCCCTGTTGCTGGTGGTTGGAACCCTGGTCTTGGAGTGGGAGGACAGCAGGTaGGTGATGAGCAGAGGTATG +
Preference number: 4 (lower is better)
Translates to: SRTLPEALLLVVGTLVLEWEDSR*VMSRGM
Trigger: CATACCTCTGCTCATCACTCACCTGCTGTCCTCCCA...CTCCAAGACCAGGGTTCCAACCACCAGCAACAGGGCTTCCGGCAGGGTGCGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000080932.8
ENSMUST00000206728.2
CDS-3UTR TCA 90 bp GTCTTGGAGCTGTCCAGCAGTGAGTGGGAACTGCTGAGGAGGTACACGCTCGCCTTGTCTGAGGCCCGCTaGGGCGGCATAGATCCCATC +
Preference number: 4 (lower is better)
Translates to: VLELSSSEWELLRRYTLALSEAR*GGIDPI
Trigger: GATGGGATCTATGCCGCCTCAGCGGGCCTCAGACAA...GGCGAGCGTGTACCTCCTCAGCAGTTCCCACTCACTGCTGGACAGCTCCAAGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000080932.8
ENSMUST00000206728.2
ENSMUST00000206735.2
CDS-3UTR GCA 90 bp GGAATTTGGGCAGGAAGAAGGATGGAGAGCCGCACCCTGCCGGAAGCCCTGTTGTTGGTGAGCTCCTGCTaGAGCTGCTGCCACTGCTCG +
Preference number: 4 (lower is better)
Translates to: GIWAGRRMESRTLPEALLLVSSC*SCCHCS
Trigger: CGAGCAGTGGCAGCAGCTGCAGCAGGAGCTCACCAA...CAACAGGGCTTCCGGCAGGGTGCGGCTCTCCATCCTTCTTCCTGCCCAAATTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080932.8
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206728.2
ENSMUST00000206744.2
CDS-3UTR GCA 90 bp CTGCTCTCCCAGCACCAGGTCCTCGTGCTTCAGAACCCACTTGTCCTTGGGCACTTGGTGAGCTCCTGCTaGAGCTGCTGCCACTGCTCG +
Preference number: 4 (lower is better)
Translates to: LLSQHQVLVLQNPLVLGHLVSSC*SCCHCS
Trigger: CGAGCAGTGGCAGCAGCTGCAGCAGGAGCTCACCAA...GTGCCCAAGGACAAGTGGGTTCTGAAGCACGAGGACCTGGTGCTGGGAGAGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206744.2
CDS-3UTR GCA 90 bp AAGGATGGAGAGCCGCACCCTGCCGGAAGCCCTGTTGCTGGTGGTTGGAACCCTTGGCTTCCTGGTACTTaGGCCTGGCCTGGGTGCTAT +
Preference number: 4 (lower is better)
Translates to: KDGEPHPAGSPVAGGWNPWLPGT*AWPGCY
Trigger: ATAGCACCCAGGCCAGGCGCAAGTACCAGGAAGCCA...AGGGTTCCAACCACCAGCAACAGGGCTTCCGGCAGGGTGCGGCTCTCCATCCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080932.8
ENSMUST00000205617.2
ENSMUST00000206728.2
ENSMUST00000206744.2
CDS-3UTR GCA 90 bp TCCCACATCACAGACAGTACATACTCCTGCTTGCCCTGGCTCTCCCGAACCAGGGTGGTGGTGCAGCTGTaGGGCCCTCACACCCAGGAC +
Preference number: 4 (lower is better)
Translates to: SHITDSTYSCLPWLSRTRVVVQL*GPHTQD
Trigger: GTCCTGGGTGTGAGGGCCGCACAGCTGCACCACCAC...CCTGGTTCGGGAGAGCCAGGGCAAGCAGGAGTATGTACTGTCTGTGATGTGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000205617.2
CDS-3UTR GCA 90 bp CGCACCCTGCCGGAAGCCCTGTTGCTGGTGGTTGGAACCCTGGTCTTGGAGCTGTCCTCGTGCAAATCCTaGAGTGACTGCAGCAGGCCA +
Preference number: 4 (lower is better)
Translates to: RTLPEALLLVVGTLVLELSSCKS*SDCSRP
Trigger: TGGCCTGCTGCAGTCACTGCAGGATTTGCACGAGGA...CAGCTCCAAGACCAGGGTTCCAACCACCAGCAACAGGGCTTCCGGCAGGGTGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000080932.8
ENSMUST00000205617.2
ENSMUST00000206728.2
CDS-3UTR GCA 90 bp GCCGCACCCTGCCGGAAGCCCTGTTGCTGGTGGTTGGAACCCTGGTCTTGGAGCGATGCCACATCGTCCTaGACCAGACTGCTAATCTCC +
Preference number: 4 (lower is better)
Translates to: AAPCRKPCCWWLEPWSWSDATSS*TRLLIS
Trigger: GGAGATTAGCAGTCTGGTGCAGGACGATGTGGCATC...GCTCCAAGACCAGGGTTCCAACCACCAGCAACAGGGCTTCCGGCAGGGTGCGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000080932.8
ENSMUST00000205617.2
ENSMUST00000206728.2
CDS-3UTR GCA 90 bp GGCAGGAAGAAGGATGGAGAGCCGCACCCTGCCGGAAGCCCTGTTGCTGGTGGTCTCACGGTGAATGGATaGCACATCGTCCTGCACCAG +
Preference number: 4 (lower is better)
Translates to: GRKKDGEPHPAGSPVAGGLTVNG*HIVLHQ
Trigger: CTGGTGCAGGACGATGTGGCATCCATTCACCGTGAG...ACCACCAGCAACAGGGCTTCCGGCAGGGTGCGGCTCTCCATCCTTCTTCCTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000080932.8
ENSMUST00000205617.2
ENSMUST00000206728.2
CDS-3UTR GCA 90 bp GTCTTGGAGCTGTCCAGCAGTGAGTGGGAACTGCTGAGGAGGTACACGCTCGCCACCTCCGGCACGAGCTaGAGTGGTGGAGGGATAGAG +
Preference number: 4 (lower is better)
Translates to: VLELSSSEWELLRRYTLATSGTS*SGGGIE
Trigger: CTCTATCCCTCCACCACTGCAGCTCGTGCCGGAGGT...GGCGAGCGTGTACCTCCTCAGCAGTTCCCACTCACTGCTGGACAGCTCCAAGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000080932.8
ENSMUST00000206728.2
CDS-3UTR GCA 90 bp CCGCACCCTGCCGGAAGCCCTGTTGCTGGTGGTTGGAACCCTGGTCTTGGAGCTGTACATACTCCTGCTTaGCCTGGCTCTCCCGAACCA +
Preference number: 4 (lower is better)
Translates to: PHPAGSPVAGGWNPGLGAVHTPA*PGSPEP
Trigger: TGGTTCGGGAGAGCCAGGGCAAGCAGGAGTATGTAC...AGCTCCAAGACCAGGGTTCCAACCACCAGCAACAGGGCTTCCGGCAGGGTGCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000080932.8
ENSMUST00000206728.2
CDS-3UTR CCA 90 bp GGATGGAGAGCCGCACCCTGCCGGAAGCCCTGTTGCTGGTGGTTGGAACCCTGGTCACTCTTGACCCTCTaGGCCATCCACTTCCTCATG +
Preference number: 4 (lower is better)
Translates to: GWRAAPCRKPCCWWLEPWSLLTL*AIHFLM
Trigger: CATGAGGAAGTGGATGGCCCAGAGGGTCAAGAGTGA...CCAGGGTTCCAACCACCAGCAACAGGGCTTCCGGCAGGGTGCGGCTCTCCATCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080932.8
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206728.2
ENSMUST00000206744.2
CDS-3UTR CCA 90 bp GTGCTTCAGAACCCACTTGTCCTTGGGCACCGCCCTGAACAGGACAACACCACTCCGCTGCTCCAGCTCTaGCCTCCGCTGTCCTGCAAG +
Preference number: 4 (lower is better)
Translates to: VLQNPLVLGHRPEQDNTTPLLQL*PPLSCK
Trigger: CTTGCAGGACAGCGGAGGCCAGAGCTGGAGCAGCGG...AGTGGTGTTGTCCTGTTCAGGGCGGTGCCCAAGGACAAGTGGGTTCTGAAGCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206744.2
CDS-3UTR CCA 90 bp GCAGGAAGAAGGATGGAGAGCCGCACCCTGCCGGAAGCCCTGTTGCTGGTGGTTAGCATGAACCGGTGGTaGTGGTGGTGGTGCAGCTGT +
Preference number: 4 (lower is better)
Translates to: AGRRMESRTLPEALLLVVSMNRW*WWWCSC
Trigger: ACAGCTGCACCACCACCACCACCACCGGTTCATGCT...AACCACCAGCAACAGGGCTTCCGGCAGGGTGCGGCTCTCCATCCTTCTTCCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000080932.8
ENSMUST00000205617.2
ENSMUST00000206728.2
CDS-3UTR CCA 90 bp GAAGGATGGAGAGCCGCACCCTGCCGGAAGCCCTGTTGCTGGTGGTTGGAACCCCCAGCTCACGGTGAATaGATGCCACATCGTCCTGCA +
Preference number: 4 (lower is better)
Translates to: EGWRAAPCRKPCCWWLEPPAHGE*MPHRPA
Trigger: TGCAGGACGATGTGGCATCCATTCACCGTGAGCTGG...GGGTTCCAACCACCAGCAACAGGGCTTCCGGCAGGGTGCGGCTCTCCATCCTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000080932.8
ENSMUST00000205617.2
ENSMUST00000206728.2
CDS-3UTR CCA 90 bp GGATGGAGAGCCGCACCCTGCCGGAAGCCCTGTTGCTGGTGGTTGGAACCCTGGTACTCAAACTCAGGCTaGATCCGAGCAGCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: GWRAAPCRKPCCWWLEPWYSNSG*IRAAAA
Trigger: TGCAGCTGCTGCTCGGATCCAGCCTGAGTTTGAGTA...CCAGGGTTCCAACCACCAGCAACAGGGCTTCCGGCAGGGTGCGGCTCTCCATCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000080932.8
ENSMUST00000205617.2
ENSMUST00000206728.2
CDS-3UTR CCA 90 bp GAAGGATGGAGAGCCGCACCCTGCCGGAAGCCCTGTTGCTGGTGGTTGGAACCCCACGAGCTGCAGTGGTaGAGGGATAGAGAACTTGGG +
Preference number: 4 (lower is better)
Translates to: EGWRAAPCRKPCCWWLEPHELQW*RDRELG
Trigger: CCCAAGTTCTCTATCCCTCCACCACTGCAGCTCGTG...GGGTTCCAACCACCAGCAACAGGGCTTCCGGCAGGGTGCGGCTCTCCATCCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000080932.8
ENSMUST00000206728.2
CDS-3UTR CCA 90 bp CCGCACCCTGCCGGAAGCCCTGTTGCTGGTGGTTGGAACCCTGGTCTTGGAGCTCACGAGCTGCAGTGGTaGAGGGATAGAGAACTTGGG +
Preference number: 4 (lower is better)
Translates to: PHPAGSPVAGGWNPGLGAHELQW*RDRELG
Trigger: CCCAAGTTCTCTATCCCTCCACCACTGCAGCTCGTG...AGCTCCAAGACCAGGGTTCCAACCACCAGCAACAGGGCTTCCGGCAGGGTGCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000080932.8
ENSMUST00000206728.2
CDS-3UTR CCA 90 bp AGAAGGATGGAGAGCCGCACCCTGCCGGAAGCCCTGTTGCTGGTGGTTGGAACCGGCCTTGAGGTCAGGTaGGAGTGTCTCTCGGCAAGA +
Preference number: 4 (lower is better)
Translates to: RRMESRTLPEALLLVVGTGLEVR*ECLSAR
Trigger: TCTTGCCGAGAGACACTCCCACCTGACCTCAAGGCC...GGTTCCAACCACCAGCAACAGGGCTTCCGGCAGGGTGCGGCTCTCCATCCTTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000080932.8
ENSMUST00000206728.2
CDS-3UTR CCA 90 bp ACCCTGCCGGAAGCCCTGTTGCTGGTGGTTGGAACCCTGGTCTTGGAGCTGTCCGGCCTTGAGGTCAGGTaGGAGTGTCTCTCGGCAAGA +
Preference number: 4 (lower is better)
Translates to: TLPEALLLVVGTLVLELSGLEVR*ECLSAR
Trigger: TCTTGCCGAGAGACACTCCCACCTGACCTCAAGGCC...GGACAGCTCCAAGACCAGGGTTCCAACCACCAGCAACAGGGCTTCCGGCAGGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000080932.8
ENSMUST00000206728.2
CDS-3UTR CCA 90 bp AGTTCAGATCTTCTGCATGCTGCCGCAGCACCCGGCTCAAGTTCTCGGTCTGGCCCGCTGCTCCAGCTCTaGCCTCCGCTGTCCTTTCTC +
Preference number: 4 (lower is better)
Translates to: SSDLLHAAAAPGSSSRSGPLLQL*PPLSFL
Trigger: GAGAAAGGACAGCGGAGGCCAGAGCTGGAGCAGCGG...GCCAGACCGAGAACTTGAGCCGGGTGCTGCGGCAGCATGCAGAAGATCTGAACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206539.2
CDS-3UTR CCA 90 bp CCGCACCCTGCCGGAAGCCCTGTTGCTGGTGGTTGGAACCCTGGTCTTGGAGCTAGAGCGAACCTTTGCTaGCTTCCTGGTACTTGCGCC +
Preference number: 4 (lower is better)
Translates to: PHPAGSPVAGGWNPGLGARANLC*LPGTCA
Trigger: GGCGCAAGTACCAGGAAGCCAGCAAAGGTTCGCTCT...AGCTCCAAGACCAGGGTTCCAACCACCAGCAACAGGGCTTCCGGCAGGGTGCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206744.2
3UTR CAA 72 bp CCGGAAGCCCTGTTGCTGGTGGTTGGAACCCTGGTCTaGGAGCTGTCCAGCAGTGAGTGGGAACTGCTGAGG +
Preference number: 4 (lower is better)
Translates to: PEALLLVVGTLV*ELSSSEWELLR
Trigger: CCTCAGCAGTTCCCACTCACTGCTGGACAGCTCCAAGACCAGGGTTCCAACCACCAGCAACAGGGCTTCCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000080932.8
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206728.2
ENSMUST00000206735.2
ENSMUST00000206744.2
3UTR CAA 72 bp CACCCGTTCCCGGGGGTGGGTGTTCTGTTCCTCACTTaGGAGCTCACGCTGCAGCTGACTGACCATCTCCTG +
Preference number: 4 (lower is better)
Translates to: HPFPGVGVLFLT*ELTLQLTDHLL
Trigger: CAGGAGATGGTCAGTCAGCTGCAGCGTGAGCTCCAAAGTGAGGAACAGAACACCCACCCCCGGGAACGGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206744.2
CDS-3UTR TCA 90 bp AGGAATTTGGGCAGGAAGAAGGATGGAGAGCCGCACCCTGCCGGAAGCCCTGTTGTGAGGCCCCCAGGCTaGAGGTCTCCCACAGCAAAA +
Preference number: 4 (lower is better)
Translates to: RNLGRKKDGEPHPAGSPVVRPPG*RSPTAK
Trigger: TTTTGCTGTGGGAGACCTTCAGCCTGGGGGCCTCAC...AACAGGGCTTCCGGCAGGGTGCGGCTCTCCATCCTTCTTCCTGCCCAAATTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000080932.8
ENSMUST00000206728.2
CDS-3UTR GCA 90 bp GGAGAGCCGCACCCTGCCGGAAGCCCTGTTGCTGGTGGTTGGAACCCTGGTCTTCCATCCACTTCCTCATaGCCTCCAATAAGCGCAGCT +
Preference number: 4 (lower is better)
Translates to: GEPHPAGSPVAGGWNPGLPSTSS*PPISAA
Trigger: AGCTGCGCTTATTGGAGGGCATGAGGAAGTGGATGG...AAGACCAGGGTTCCAACCACCAGCAACAGGGCTTCCGGCAGGGTGCGGCTCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080932.8
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206728.2
ENSMUST00000206744.2
CDS-3UTR GCA 90 bp AGGATGGAGAGCCGCACCCTGCCGGAAGCCCTGTTGCTGGTGGTTGGAACCCTGCCATCCACTTCCTCATaGCCTCCAATAAGCGCAGCT +
Preference number: 4 (lower is better)
Translates to: RMESRTLPEALLLVVGTLPSTSS*PPISAA
Trigger: AGCTGCGCTTATTGGAGGGCATGAGGAAGTGGATGG...CAGGGTTCCAACCACCAGCAACAGGGCTTCCGGCAGGGTGCGGCTCTCCATCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080932.8
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206728.2
ENSMUST00000206744.2
CDS-3UTR GCA 90 bp GTCTCTCGGCAAGACTTCACAGCCACCGGGGTATTGTCTGCACGAAGGCGGCCAAGCTCCTGCTGCAGCTaGTGCCACTGCTCGTTGTAC +
Preference number: 4 (lower is better)
Translates to: VSRQDFTATGVLSARRRPSSCCS*CHCSLY
Trigger: GTACAACGAGCAGTGGCAGCAGCTGCAGCAGGAGCT...TGGCCGCCTTCGTGCAGACAATACCCCGGTGGCTGTGAAGTCTTGCCGAGAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206744.2
CDS-3UTR GCA 90 bp GTCTTGGAGCTGTCCAGCAGTGAGTGGGAACTGCTGAGGAGGTACACGCTCGCCTGGCTTCCTGGTACTTaGGCCTGGCCTGGGTGCTAT +
Preference number: 4 (lower is better)
Translates to: VLELSSSEWELLRRYTLAWLPGT*AWPGCY
Trigger: ATAGCACCCAGGCCAGGCGCAAGTACCAGGAAGCCA...GGCGAGCGTGTACCTCCTCAGCAGTTCCCACTCACTGCTGGACAGCTCCAAGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080932.8
ENSMUST00000205617.2
ENSMUST00000206728.2
ENSMUST00000206744.2
CDS-3UTR GCA 90 bp CCGCACCCTGCCGGAAGCCCTGTTGCTGGTGGTTGGAACCCTGGTCTTGGAGCTGATGCCACATCGTCCTaGACCAGACTGCTAATCTCC +
Preference number: 4 (lower is better)
Translates to: PHPAGSPVAGGWNPGLGADATSS*TRLLIS
Trigger: GGAGATTAGCAGTCTGGTGCAGGACGATGTGGCATC...AGCTCCAAGACCAGGGTTCCAACCACCAGCAACAGGGCTTCCGGCAGGGTGCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000080932.8
ENSMUST00000205617.2
ENSMUST00000206728.2
CDS-3UTR GCA 90 bp AAGGATGGAGAGCCGCACCCTGCCGGAAGCCCTGTTGCTGGTGGTTGGAACCCTCTCACGGTGAATGGATaGCACATCGTCCTGCACCAG +
Preference number: 4 (lower is better)
Translates to: KDGEPHPAGSPVAGGWNPLTVNG*HIVLHQ
Trigger: CTGGTGCAGGACGATGTGGCATCCATTCACCGTGAG...AGGGTTCCAACCACCAGCAACAGGGCTTCCGGCAGGGTGCGGCTCTCCATCCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000080932.8
ENSMUST00000205617.2
ENSMUST00000206728.2
CDS-3UTR GCA 90 bp GCAGGAAGAAGGATGGAGAGCCGCACCCTGCCGGAAGCCCTGTTGCTGGTGGTTCTCACGGTGAATGGATaGCACATCGTCCTGCACCAG +
Preference number: 4 (lower is better)
Translates to: AGRRMESRTLPEALLLVVLTVNG*HIVLHQ
Trigger: CTGGTGCAGGACGATGTGGCATCCATTCACCGTGAG...AACCACCAGCAACAGGGCTTCCGGCAGGGTGCGGCTCTCCATCCTTCTTCCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000080932.8
ENSMUST00000205617.2
ENSMUST00000206728.2
CDS-3UTR GCA 90 bp CACCCTGCCGGAAGCCCTGTTGCTGGTGGTTGGAACCCTGGTCTTGGAGCTGTCGCCTCTTGCAGCATCTaGCTCTTGCTCAGAAGCTGC +
Preference number: 4 (lower is better)
Translates to: HPAGSPVAGGWNPGLGAVASCSI*LLLRSC
Trigger: GCAGCTTCTGAGCAAGAGGCAGATGCTGCAAGAGGC...GACAGCTCCAAGACCAGGGTTCCAACCACCAGCAACAGGGCTTCCGGCAGGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000080932.8
ENSMUST00000206728.2
CDS-3UTR GCA 90 bp CAGGAAGAAGGATGGAGAGCCGCACCCTGCCGGAAGCCCTGTTGCTGGTGGTTGGCCTCTTGCAGCATCTaGCTCTTGCTCAGAAGCTGC +
Preference number: 4 (lower is better)
Translates to: QEEGWRAAPCRKPCCWWLASCSI*LLLRSC
Trigger: GCAGCTTCTGAGCAAGAGGCAGATGCTGCAAGAGGC...CAACCACCAGCAACAGGGCTTCCGGCAGGGTGCGGCTCTCCATCCTTCTTCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000080932.8
ENSMUST00000206728.2
CDS-3UTR GCA 90 bp GGAACCCTGGTCTTGGAGCTGTCCAGCAGTGAGTGGGAACTGCTGAGGAGGTACACCTCCGGCACGAGCTaGAGTGGTGGAGGGATAGAG +
Preference number: 4 (lower is better)
Translates to: GTLVLELSSSEWELLRRYTSGTS*SGGGIE
Trigger: CTCTATCCCTCCACCACTGCAGCTCGTGCCGGAGGT...GTACCTCCTCAGCAGTTCCCACTCACTGCTGGACAGCTCCAAGACCAGGGTTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000080932.8
ENSMUST00000206728.2
CDS-3UTR GCA 90 bp GGAATTTGGGCAGGAAGAAGGATGGAGAGCCGCACCCTGCCGGAAGCCCTGTTGTTCCATGCCAGCAGCTaGGTCCCCTACCATCTGCAG +
Preference number: 4 (lower is better)
Translates to: GIWAGRRMESRTLPEALLFHASS*VPYHLQ
Trigger: CTGCAGATGGTAGGGGACGCAGCTGCTGGCATGGAA...CAACAGGGCTTCCGGCAGGGTGCGGCTCTCCATCCTTCTTCCTGCCCAAATTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000080932.8
ENSMUST00000206728.2
CDS-3UTR CCA 90 bp AGGATGGAGAGCCGCACCCTGCCGGAAGCCCTGTTGCTGGTGGTTGGAACCCTGTCACTCTTGACCCTCTaGGCCATCCACTTCCTCATG +
Preference number: 4 (lower is better)
Translates to: RMESRTLPEALLLVVGTLSLLTL*AIHFLM
Trigger: CATGAGGAAGTGGATGGCCCAGAGGGTCAAGAGTGA...CAGGGTTCCAACCACCAGCAACAGGGCTTCCGGCAGGGTGCGGCTCTCCATCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080932.8
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206728.2
ENSMUST00000206744.2
CDS-3UTR CCA 90 bp TCTCACCGATGCCGCTTGCGGATACTGTGGAGCTCCTGGCAGATGATGCTGAAACCGCTGCTCCAGCTCTaGCCTCCGCTGTCCTGCAAG +
Preference number: 4 (lower is better)
Translates to: SHRCRLRILWSSWQMMLKPLLQL*PPLSCK
Trigger: CTTGCAGGACAGCGGAGGCCAGAGCTGGAGCAGCGG...TTTCAGCATCATCTGCCAGGAGCTCCACAGTATCCGCAAGCGGCATCGGTGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206744.2
CDS-3UTR CCA 90 bp GATGGAGAGCCGCACCCTGCCGGAAGCCCTGTTGCTGGTGGTTGGAACCCTGGTGATCCTTGTCTTTGCTaGCTTCCTGGTACTTGCGCC +
Preference number: 4 (lower is better)
Translates to: DGEPHPAGSPVAGGWNPGDPCLC*LPGTCA
Trigger: GGCGCAAGTACCAGGAAGCCAGCAAAGACAAGGATC...ACCAGGGTTCCAACCACCAGCAACAGGGCTTCCGGCAGGGTGCGGCTCTCCATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000080932.8
ENSMUST00000205617.2
ENSMUST00000206728.2
CDS-3UTR CCA 90 bp AAGGAGCGGCACGGCTGGGGGCTCGCCCGTGCCGAGCTGCTCCATCTTGCTCTGGGACATACTTGTCTTTaGCCTTGTCTCGATCCTTGT +
Preference number: 4 (lower is better)
Translates to: KERHGWGLARAELLHLALGHTCL*PCLDPC
Trigger: ACAAGGATCGAGACAAGGCCAAAGACAAGTATGTCC...CAGAGCAAGATGGAGCAGCTCGGCACGGGCGAGCCCCCAGCCGTGCCGCTCCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000205617.2
ENSMUST00000206479.2
CDS-3UTR CCA 90 bp CTAAGAGAGGAATTTGGGCAGGAAGAAGGATGGAGAGCCGCACCCTGCCGGAAGGGCAGCATGAACCGGTaGTGGTGGTGGTGGTGCAGC +
Preference number: 4 (lower is better)
Translates to: LREEFGQEEGWRAAPCRKGSMNR*WWWWCS
Trigger: GCTGCACCACCACCACCACCACCGGTTCATGCTGCC...CTTCCGGCAGGGTGCGGCTCTCCATCCTTCTTCCTGCCCAAATTCCTCTCTTAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000080932.8
ENSMUST00000205617.2
ENSMUST00000206728.2
CDS-3UTR CCA 90 bp CCTAAGAGAGGAATTTGGGCAGGAAGAAGGATGGAGAGCCGCACCCTGCCGGAAGGCAGCATGAACCGGTaGTGGTGGTGGTGGTGCAGC +
Preference number: 4 (lower is better)
Translates to: PKRGIWAGRRMESRTLPEGSMNR*WWWWCS
Trigger: GCTGCACCACCACCACCACCACCGGTTCATGCTGCC...TTCCGGCAGGGTGCGGCTCTCCATCCTTCTTCCTGCCCAAATTCCTCTCTTAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000080932.8
ENSMUST00000205617.2
ENSMUST00000206728.2
CDS-3UTR CCA 90 bp AGGATGGAGAGCCGCACCCTGCCGGAAGCCCTGTTGCTGGTGGTTGGAACCCTGTACTCAAACTCAGGCTaGATCCGAGCAGCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: RMESRTLPEALLLVVGTLYSNSG*IRAAAA
Trigger: TGCAGCTGCTGCTCGGATCCAGCCTGAGTTTGAGTA...CAGGGTTCCAACCACCAGCAACAGGGCTTCCGGCAGGGTGCGGCTCTCCATCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000080932.8
ENSMUST00000205617.2
ENSMUST00000206728.2
3UTR CAA 72 bp TGCAACCCTTGTATTGCCTCTTGCAGCATCTGCCTCTaGCTCAGAAGCTGCACCCGTTCCCGGGGGTGGGTG +
Preference number: 4 (lower is better)
Translates to: CNPCIASCSICL*LRSCTRSRGWV
Trigger: CACCCACCCCCGGGAACGGGTGCAGCTTCTGAGCAAGAGGCAGATGCTGCAAGAGGCAATACAAGGGTTGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206744.2
CDS-3UTR TCA 90 bp GTCCTCGTGCTTCAGAACCCACTTGTCCTTGGGCACCGCCCTGAACAGGACAACATTCCCGGTCACTCTTaGCCCTCTGGGCCATCCACT +
Preference number: 4 (lower is better)
Translates to: VLVLQNPLVLGHRPEQDNIPGHS*PSGPST
Trigger: AGTGGATGGCCCAGAGGGTCAAGAGTGACCGGGAAT...GTTGTCCTGTTCAGGGCGGTGCCCAAGGACAAGTGGGTTCTGAAGCACGAGGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206744.2
CDS-3UTR TCA 90 bp GGATGGAGAGCCGCACCCTGCCGGAAGCCCTGTTGCTGGTGGTTGGAACCCTGGTGCAAGGACATGTGGTaGAGCAATCCTGCATATTCC +
Preference number: 4 (lower is better)
Translates to: GWRAAPCRKPCCWWLEPWCKDMW*SNPAYS
Trigger: GGAATATGCAGGATTGCTTCACCACATGTCCTTGCA...CCAGGGTTCCAACCACCAGCAACAGGGCTTCCGGCAGGGTGCGGCTCTCCATCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080932.8
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206728.2
ENSMUST00000206744.2
CDS-3UTR TCA 90 bp CTCAGCACCTCTTTGGTGGCCACAGCCAGTTCATCTGTCACAGAAGTCAGCGTGGGCTGTGGGTCTTGGTaGGCTCCTGCTGCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: LSTSLVATASSSVTEVSVGCGSW*APAAAA
Trigger: AGCAGCTGCAGCAGGAGCTCACCAAGACCCACAGCC...CACGCTGACTTCTGTGACAGATGAACTGGCTGTGGCCACCAAAGAGGTGCTGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000206479.2
ENSMUST00000206744.2
CDS-3UTR TCA 90 bp GAAGGATGGAGAGCCGCACCCTGCCGGAAGCCCTGTTGCTGGTGGTTGGAACCCGCGACTCATCAAAAGTaGCACAAGGTGGCACATCAG +
Preference number: 4 (lower is better)
Translates to: EGWRAAPCRKPCCWWLEPATHQK*HKVAHQ
Trigger: CTGATGTGCCACCTTGTGTCACTTTTGATGAGTCGC...GGGTTCCAACCACCAGCAACAGGGCTTCCGGCAGGGTGCGGCTCTCCATCCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000080932.8
ENSMUST00000205617.2
ENSMUST00000206728.2
CDS-3UTR TCA 90 bp TGCACCTCCGGCACGAGCTGCAGTGGTGGAGGGATAGAGAACTTGGGGCGGAAGGTCAGGGTCCGGTACTaGGTCTTCAGCTTCTCAATG +
Preference number: 4 (lower is better)
Translates to: CTSGTSCSGGGIENLGRKVRVRY*VFSFSM
Trigger: CATTGAGAAGCTGAAGACTCAGTACCGGACCCTGAC...CTTCCGCCCCAAGTTCTCTATCCCTCCACCACTGCAGCTCGTGCCGGAGGTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000206479.2
CDS-3UTR GCA 90 bp GGTGGAGGGATAGAGAACTTGGGGCGGAAGATTCCGGAGAAGTGGCTTTTAAGGGCTTCCTGCATCTGCTaGACTGCCCCGTGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: GGGIENLGRKIPEKWLLRASCIC*TAPWPW
Trigger: CCAGGGCCACGGGGCAGTGCAGCAGATGCAGGAAGC...CCTTAAAAGCCACTTCTCCGGAATCTTCCGCCCCAAGTTCTCTATCCCTCCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206744.2
CDS-3UTR GCA 90 bp CAGCTGCGTCCCCTACCATCTGCAGCAGAGTCTTCACCCGCAGGCGGGCTCCCTGTGGTGAAGCAATCCTaGATATTCCCGGTCACTCTT +
Preference number: 4 (lower is better)
Translates to: QLRPLPSAAESSPAGGLPVVKQS*IFPVTL
Trigger: AAGAGTGACCGGGAATATGCAGGATTGCTTCACCAC...AGGGAGCCCGCCTGCGGGTGAAGACTCTGCTGCAGATGGTAGGGGACGCAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206744.2
CDS-3UTR GCA 90 bp GGATGGAGAGCCGCACCCTGCCGGAAGCCCTGTTGCTGGTGGTTGGAACCCTGGGTGGTGAAGCAATCCTaGATATTCCCGGTCACTCTT +
Preference number: 4 (lower is better)
Translates to: GWRAAPCRKPCCWWLEPWVVKQS*IFPVTL
Trigger: AAGAGTGACCGGGAATATGCAGGATTGCTTCACCAC...CCAGGGTTCCAACCACCAGCAACAGGGCTTCCGGCAGGGTGCGGCTCTCCATCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080932.8
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206728.2
ENSMUST00000206744.2
CDS-3UTR GCA 90 bp GGAACCCTGGTCTTGGAGCTGTCCAGCAGTGAGTGGGAACTGCTGAGGAGGTACAGCTCCTGCTGCAGCTaGTGCCACTGCTCGTTGTAC +
Preference number: 4 (lower is better)
Translates to: GTLVLELSSSEWELLRRYSSCCS*CHCSLY
Trigger: GTACAACGAGCAGTGGCAGCAGCTGCAGCAGGAGCT...GTACCTCCTCAGCAGTTCCCACTCACTGCTGGACAGCTCCAAGACCAGGGTTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080932.8
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206728.2
ENSMUST00000206744.2
CDS-3UTR GCA 90 bp ATCAGGGCACAGCTCTGGGCAAGGCAGACGATGCCCCTTTTCTACAAACTCCCGTTGGTGAGCTCCTGCTaGAGCTGCTGCCACTGCTCG +
Preference number: 4 (lower is better)
Translates to: IRAQLWARQTMPLFYKLPLVSSC*SCCHCS
Trigger: CGAGCAGTGGCAGCAGCTGCAGCAGGAGCTCACCAA...CGGGAGTTTGTAGAAAAGGGGCATCGTCTGCCTTGCCCAGAGCTGTGCCCTGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000205617.2
ENSMUST00000206744.2
CDS-3UTR GCA 90 bp AGGAATTTGGGCAGGAAGAAGGATGGAGAGCCGCACCCTGCCGGAAGCCCTGTTTGGCTTCCTGGTACTTaGGCCTGGCCTGGGTGCTAT +
Preference number: 4 (lower is better)
Translates to: RNLGRKKDGEPHPAGSPVWLPGT*AWPGCY
Trigger: ATAGCACCCAGGCCAGGCGCAAGTACCAGGAAGCCA...AACAGGGCTTCCGGCAGGGTGCGGCTCTCCATCCTTCTTCCTGCCCAAATTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080932.8
ENSMUST00000205617.2
ENSMUST00000206728.2
ENSMUST00000206744.2
CDS-3UTR GCA 90 bp ACCCTGGTCTTGGAGCTGTCCAGCAGTGAGTGGGAACTGCTGAGGAGGTACACGCCCGCCATCTCCTCGTaGAAATCCTGCAGTGACTGC +
Preference number: 4 (lower is better)
Translates to: TLVLELSSSEWELLRRYTPAISS*KSCSDC
Trigger: GCAGTCACTGCAGGATTTGCACGAGGAGATGGCGGG...CGTGTACCTCCTCAGCAGTTCCCACTCACTGCTGGACAGCTCCAAGACCAGGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000080932.8
ENSMUST00000205617.2
ENSMUST00000206728.2
CDS-3UTR GCA 90 bp CACCCTGCCGGAAGCCCTGTTGCTGGTGGTTGGAACCCTGGTCTTGGAGCTGTCGATGCCACATCGTCCTaGACCAGACTGCTAATCTCC +
Preference number: 4 (lower is better)
Translates to: HPAGSPVAGGWNPGLGAVDATSS*TRLLIS
Trigger: GGAGATTAGCAGTCTGGTGCAGGACGATGTGGCATC...GACAGCTCCAAGACCAGGGTTCCAACCACCAGCAACAGGGCTTCCGGCAGGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000080932.8
ENSMUST00000205617.2
ENSMUST00000206728.2
CDS-3UTR GCA 90 bp AAGGATGGAGAGCCGCACCCTGCCGGAAGCCCTGTTGCTGGTGGTTGGAACCCTCGAGCTGCTCCATCTTaGTCTGCAGAAGTTCCTGCT +
Preference number: 4 (lower is better)
Translates to: KDGEPHPAGSPVAGGWNPRAAPS*SAEVPA
Trigger: AGCAGGAACTTCTGCAGAGCAAGATGGAGCAGCTCG...AGGGTTCCAACCACCAGCAACAGGGCTTCCGGCAGGGTGCGGCTCTCCATCCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000080932.8
ENSMUST00000206728.2
CDS-3UTR GCA 90 bp CCTAAGAGAGGAATTTGGGCAGGAAGAAGGATGGAGAGCCGCACCCTGCCGGAATTCCCCCTTCCGATCTaGTCTCCCAGCACCAGGTCC +
Preference number: 4 (lower is better)
Translates to: PKRGIWAGRRMESRTLPEFPLPI*SPSTRS
Trigger: GGACCTGGTGCTGGGAGAGCAGATCGGAAGGGGGAA...TTCCGGCAGGGTGCGGCTCTCCATCCTTCTTCCTGCCCAAATTCCTCTCTTAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000080932.8
ENSMUST00000206728.2
CDS-3UTR CCA 90 bp ACACAAGGTGGCACATCAGGGGTGGATCCATATTGTCGCAGGAAGCCTAGGTACACTGCCCCGTGGCCCTaGGGGCTGCACAGCTCTGAA +
Preference number: 4 (lower is better)
Translates to: TQGGTSGVDPYCRRKPRYTAPWP*GLHSSE
Trigger: TTCAGAGCTGTGCAGCCCCCAGGGCCACGGGGCAGT...GTACCTAGGCTTCCTGCGACAATATGGATCCACCCCTGATGTGCCACCTTGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000206744.2
CDS-3UTR CCA 90 bp GCACCCTGCCGGAAGCCCTGTTGCTGGTGGTTGGAACCCTGGTCTTGGAGCTGTTCACTCTTGACCCTCTaGGCCATCCACTTCCTCATG +
Preference number: 4 (lower is better)
Translates to: APCRKPCCWWLEPWSWSCSLLTL*AIHFLM
Trigger: CATGAGGAAGTGGATGGCCCAGAGGGTCAAGAGTGA...ACAGCTCCAAGACCAGGGTTCCAACCACCAGCAACAGGGCTTCCGGCAGGGTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080932.8
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206728.2
ENSMUST00000206744.2
CDS-3UTR CCA 90 bp GACCCCGATGAGACGCACAATGTTGGGGTGGTTGTACTGTTTCAGGATCCTTGCCCGCTGCTCCAGCTCTaGCCTCCGCTGTCCTGCAAG +
Preference number: 4 (lower is better)
Translates to: DPDETHNVGVVVLFQDPCPLLQL*PPLSCK
Trigger: CTTGCAGGACAGCGGAGGCCAGAGCTGGAGCAGCGG...GCAAGGATCCTGAAACAGTACAACCACCCCAACATTGTGCGTCTCATCGGGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000205617.2
ENSMUST00000206744.2
CDS-3UTR CCA 90 bp ATCAGCACGCTCAGTTTGCTCAAGGGCCCCGAGTTCAGATCTTCTGCATGCTGCATCTCTGCCCAGGACTaGCTGACAGGGCTGTCGGGG +
Preference number: 4 (lower is better)
Translates to: ISTLSLLKGPEFRSSACCISAQD*LTGLSG
Trigger: CCCCGACAGCCCTGTCAGCCAGTCCTGGGCAGAGAT...GCAGCATGCAGAAGATCTGAACTCGGGGCCCTTGAGCAAACTGAGCGTGCTGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000206539.2
CDS-3UTR CCA 90 bp TGCACCTCCGGCACGAGCTGCAGTGGTGGAGGGATAGAGAACTTGGGGCGGAAGAGCTTCTCAATGTCCTaGCTGTGGGTCTTGGTGAGC +
Preference number: 4 (lower is better)
Translates to: CTSGTSCSGGGIENLGRKSFSMS*LWVLVS
Trigger: GCTCACCAAGACCCACAGCCAGGACATTGAGAAGCT...CTTCCGCCCCAAGTTCTCTATCCCTCCACCACTGCAGCTCGTGCCGGAGGTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206744.2
CDS-3UTR CCA 90 bp GCAGGAAGAAGGATGGAGAGCCGCACCCTGCCGGAAGCCCTGTTGCTGGTGGTTGATCCTTGTCTTTGCTaGCTTCCTGGTACTTGCGCC +
Preference number: 4 (lower is better)
Translates to: AGRRMESRTLPEALLLVVDPCLC*LPGTCA
Trigger: GGCGCAAGTACCAGGAAGCCAGCAAAGACAAGGATC...AACCACCAGCAACAGGGCTTCCGGCAGGGTGCGGCTCTCCATCCTTCTTCCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000080932.8
ENSMUST00000205617.2
ENSMUST00000206728.2
CDS-3UTR CCA 90 bp AGCAGTGAGTGGGAACTGCTGAGGAGGTACACGCTCGCCTCCGGGTCTCACCGATACTCAAACTCAGGCTaGATCCGAGCAGCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: SSEWELLRRYTLASGSHRYSNSG*IRAAAA
Trigger: TGCAGCTGCTGCTCGGATCCAGCCTGAGTTTGAGTA...TCGGTGAGACCCGGAGGCGAGCGTGTACCTCCTCAGCAGTTCCCACTCACTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000205617.2
CDS-3UTR CCA 90 bp GAGCTGTCCAGCAGTGAGTGGGAACTGCTGAGGAGGTACACGCTCGCCTCCGGGAAAAGTGACACAAGGTaGCACATCAGGGGTGGATCC +
Preference number: 4 (lower is better)
Translates to: ELSSSEWELLRRYTLASGKSDTR*HIRGGS
Trigger: GGATCCACCCCTGATGTGCCACCTTGTGTCACTTTT...CCCGGAGGCGAGCGTGTACCTCCTCAGCAGTTCCCACTCACTGCTGGACAGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000080932.8
ENSMUST00000205617.2
ENSMUST00000206728.2
CDS-3UTR CCA 90 bp GTTGGAACCCTGGTCTTGGAGCTGTCCAGCAGTGAGTGGGAACTGCTGAGGAGGTACTCCTGCTTGCCCTaGCTCTCCCGAACCAGGAAG +
Preference number: 4 (lower is better)
Translates to: VGTLVLELSSSEWELLRRYSCLP*LSRTRK
Trigger: CTTCCTGGTTCGGGAGAGCCAGGGCAAGCAGGAGTA...CCTCCTCAGCAGTTCCCACTCACTGCTGGACAGCTCCAAGACCAGGGTTCCAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000080932.8
ENSMUST00000206728.2
CDS-3UTR CCA 90 bp TGCCTAAGAGAGGAATTTGGGCAGGAAGAAGGATGGAGAGCCGCACCCTGCCGGTACTCCTGCTTGCCCTaGCTCTCCCGAACCAGGAAG +
Preference number: 4 (lower is better)
Translates to: CLREEFGQEEGWRAAPCRYSCLP*LSRTRK
Trigger: CTTCCTGGTTCGGGAGAGCCAGGGCAAGCAGGAGTA...CCGGCAGGGTGCGGCTCTCCATCCTTCTTCCTGCCCAAATTCCTCTCTTAGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000080932.8
ENSMUST00000206728.2
CDS-3UTR CCA 90 bp GCAGGAAGAAGGATGGAGAGCCGCACCCTGCCGGAAGCCCTGTTGCTGGTGGTTATGAAATGTCGGGGCTaGCCATCCCACATCACAGAC +
Preference number: 4 (lower is better)
Translates to: AGRRMESRTLPEALLLVVMKCRG*PSHITD
Trigger: GTCTGTGATGTGGGATGGCCAGCCCCGACATTTCAT...AACCACCAGCAACAGGGCTTCCGGCAGGGTGCGGCTCTCCATCCTTCTTCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000080932.8
ENSMUST00000206728.2
CDS-3UTR CCA 90 bp GCACCCTGCCGGAAGCCCTGTTGCTGGTGGTTGGAACCCTGGTCTTGGAGCTGTGCAGCCAGGTCCCTGTaGATACAACACTTGCTTTCC +
Preference number: 4 (lower is better)
Translates to: APCRKPCCWWLEPWSWSCAARSL*IQHLLS
Trigger: GGAAAGCAAGTGTTGTATCCACAGGGACCTGGCTGC...ACAGCTCCAAGACCAGGGTTCCAACCACCAGCAACAGGGCTTCCGGCAGGGTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000080932.8
ENSMUST00000206728.2
CDS-3UTR CCA 90 bp CCCTGCCGGAAGCCCTGTTGCTGGTGGTTGGAACCCTGGTCTTGGAGCTGTCCAGCAGCCAGGTCCCTGTaGATACAACACTTGCTTTCC +
Preference number: 4 (lower is better)
Translates to: PCRKPCCWWLEPWSWSCPAARSL*IQHLLS
Trigger: GGAAAGCAAGTGTTGTATCCACAGGGACCTGGCTGC...TGGACAGCTCCAAGACCAGGGTTCCAACCACCAGCAACAGGGCTTCCGGCAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000080932.8
ENSMUST00000206728.2
CDS-3UTR TCA 90 bp CCGCACCCTGCCGGAAGCCCTGTTGCTGGTGGTTGGAACCCTGGTCTTGGAGCTTGCAAGGACATGTGGTaGAGCAATCCTGCATATTCC +
Preference number: 4 (lower is better)
Translates to: PHPAGSPVAGGWNPGLGACKDMW*SNPAYS
Trigger: GGAATATGCAGGATTGCTTCACCACATGTCCTTGCA...AGCTCCAAGACCAGGGTTCCAACCACCAGCAACAGGGCTTCCGGCAGGGTGCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080932.8
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206728.2
ENSMUST00000206744.2
CDS-3UTR TCA 90 bp GGAATTTGGGCAGGAAGAAGGATGGAGAGCCGCACCCTGCCGGAAGCCCTGTTGACCAGGGTCCGGTACTaGGTCTTCAGCTTCTCAATG +
Preference number: 4 (lower is better)
Translates to: GIWAGRRMESRTLPEALLTRVRY*VFSFSM
Trigger: CATTGAGAAGCTGAAGACTCAGTACCGGACCCTGGT...CAACAGGGCTTCCGGCAGGGTGCGGCTCTCCATCCTTCTTCCTGCCCAAATTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080932.8
ENSMUST00000205617.2
ENSMUST00000206728.2
ENSMUST00000206744.2
CDS-3UTR TCA 90 bp CTGCTCTCCCAGCACCAGGTCCTCGTGCTTCAGAACCCACTTGTCCTTGGGCACACCAGGGTCCGGTACTaGGTCTTCAGCTTCTCAATG +
Preference number: 4 (lower is better)
Translates to: LLSQHQVLVLQNPLVLGHTRVRY*VFSFSM
Trigger: CATTGAGAAGCTGAAGACTCAGTACCGGACCCTGGT...GTGCCCAAGGACAAGTGGGTTCTGAAGCACGAGGACCTGGTGCTGGGAGAGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000205617.2
ENSMUST00000206744.2
CDS-3UTR TCA 90 bp GGATGGAGAGCCGCACCCTGCCGGAAGCCCTGTTGCTGGTGGTTGGAACCCTGGACATCCCAAAGTCGCTaGTCTTCAGGACATTCTTCT +
Preference number: 4 (lower is better)
Translates to: GWRAAPCRKPCCWWLEPWTSQSR*SSGHSS
Trigger: AGAAGAATGTCCTGAAGATCAGCGACTTTGGGATGT...CCAGGGTTCCAACCACCAGCAACAGGGCTTCCGGCAGGGTGCGGCTCTCCATCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000080932.8
ENSMUST00000206728.2
ENSMUST00000206735.2
CDS-3UTR GCA 90 bp TCCCTGTGGATACAACACTTGCTTTCCAAGTATTCCATGCCAGCAGCTGCGTCCGCTTCCTGCATCTGCTaGACTGCCCCGTGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: SLWIQHLLSKYSMPAAASASCIC*TAPWPW
Trigger: CCAGGGCCACGGGGCAGTGCAGCAGATGCAGGAAGC...GGACGCAGCTGCTGGCATGGAATACTTGGAAAGCAAGTGTTGTATCCACAGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206744.2
CDS-3UTR GCA 90 bp ATCAGGGCACAGCTCTGGGCAAGGCAGACGATGCCCCTTTTCTACAAACTCCCGCCCGCCATCTCCTCGTaGAAATCCTGCAGTGACTGC +
Preference number: 4 (lower is better)
Translates to: IRAQLWARQTMPLFYKLPPAISS*KSCSDC
Trigger: GCAGTCACTGCAGGATTTGCACGAGGAGATGGCGGG...CGGGAGTTTGTAGAAAAGGGGCATCGTCTGCCTTGCCCAGAGCTGTGCCCTGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000205617.2
CDS-3UTR GCA 90 bp GGATGGAGAGCCGCACCCTGCCGGAAGCCCTGTTGCTGGTGGTTGGAACCCTGGATCTCCAGGTATTCCTaGAGGATGTCCTTCAGAATG +
Preference number: 4 (lower is better)
Translates to: GWRAAPCRKPCCWWLEPWISRYS*RMSFRM
Trigger: CATTCTGAAGGACATCCTGCAGGAATACCTGGAGAT...CCAGGGTTCCAACCACCAGCAACAGGGCTTCCGGCAGGGTGCGGCTCTCCATCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000080932.8
ENSMUST00000205617.2
ENSMUST00000206728.2
CDS-3UTR GCA 90 bp GTTGGAACCCTGGTCTTGGAGCTGTCCAGCAGTGAGTGGGAACTGCTGAGGAGGGTACATACTCCTGCTTaGCCTGGCTCTCCCGAACCA +
Preference number: 4 (lower is better)
Translates to: VGTLVLELSSSEWELLRRVHTPA*PGSPEP
Trigger: TGGTTCGGGAGAGCCAGGGCAAGCAGGAGTATGTAC...CCTCCTCAGCAGTTCCCACTCACTGCTGGACAGCTCCAAGACCAGGGTTCCAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000080932.8
ENSMUST00000206728.2
CDS-3UTR GCA 90 bp GTTGGAACCCTGGTCTTGGAGCTGTCCAGCAGTGAGTGGGAACTGCTGAGGAGGAGCACCAGGTCCTCGTaGTTCAGAACCCACTTGTCC +
Preference number: 4 (lower is better)
Translates to: VGTLVLELSSSEWELLRRSTRSS*FRTHLS
Trigger: GGACAAGTGGGTTCTGAAGCACGAGGACCTGGTGCT...CCTCCTCAGCAGTTCCCACTCACTGCTGGACAGCTCCAAGACCAGGGTTCCAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000080932.8
ENSMUST00000206728.2
CDS-3UTR GCA 90 bp CCTAAGAGAGGAATTTGGGCAGGAAGAAGGATGGAGAGCCGCACCCTGCCGGAATTCCATGCCAGCAGCTaGGTCCCCTACCATCTGCAG +
Preference number: 4 (lower is better)
Translates to: PKRGIWAGRRMESRTLPEFHASS*VPYHLQ
Trigger: CTGCAGATGGTAGGGGACGCAGCTGCTGGCATGGAA...TTCCGGCAGGGTGCGGCTCTCCATCCTTCTTCCTGCCCAAATTCCTCTCTTAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000080932.8
ENSMUST00000206728.2
CDS-3UTR GCA 90 bp GCACCCTGCCGGAAGCCCTGTTGCTGGTGGTTGGAACCCTGGTCTTGGAGCTGTTTTCCAAGTATTCCATaGCAGCAGCTGCGTCCCCTA +
Preference number: 4 (lower is better)
Translates to: APCRKPCCWWLEPWSWSCFPSIP*QQLRPL
Trigger: TAGGGGACGCAGCTGCTGGCATGGAATACTTGGAAA...ACAGCTCCAAGACCAGGGTTCCAACCACCAGCAACAGGGCTTCCGGCAGGGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000080932.8
ENSMUST00000206728.2
CDS-3UTR GCA 90 bp AGCCCCGTGGTACCACAGCTGCTCATAGAGAGGCTTCTGCACCTCCGGCACGAGAGAAGAGCGAACCTTTaGTGGCTTCCTGGTACTTGC +
Preference number: 4 (lower is better)
Translates to: SPVVPQLLIERLLHLRHERRANL*WLPGTC
Trigger: GCAAGTACCAGGAAGCCAGCAAAGGTTCGCTCTTCT...CTCGTGCCGGAGGTGCAGAAGCCTCTCTATGAGCAGCTGTGGTACCACGGGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000206744.2
CDS-3UTR CCA 90 bp GTCCTCGTGCTTCAGAACCCACTTGTCCTTGGGCACCGCCCTGAACAGGACAACTCAATGTCCTGGCTGTaGGTCTTGGTGAGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: VLVLQNPLVLGHRPEQDNSMSWL*VLVSSC
Trigger: GCAGGAGCTCACCAAGACCCACAGCCAGGACATTGA...GTTGTCCTGTTCAGGGCGGTGCCCAAGGACAAGTGGGTTCTGAAGCACGAGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206744.2
CDS-3UTR CCA 90 bp AGAGGAATTTGGGCAGGAAGAAGGATGGAGAGCCGCACCCTGCCGGAAGCCCTGGATCCTTGTCTTTGCTaGCTTCCTGGTACTTGCGCC +
Preference number: 4 (lower is better)
Translates to: RGIWAGRRMESRTLPEALDPCLC*LPGTCA
Trigger: GGCGCAAGTACCAGGAAGCCAGCAAAGACAAGGATC...CAGGGCTTCCGGCAGGGTGCGGCTCTCCATCCTTCTTCCTGCCCAAATTCCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000080932.8
ENSMUST00000205617.2
ENSMUST00000206728.2
CDS-3UTR CCA 90 bp TGCCTAAGAGAGGAATTTGGGCAGGAAGAAGGATGGAGAGCCGCACCCTGCCGGCCAGCTCACGGTGAATaGATGCCACATCGTCCTGCA +
Preference number: 4 (lower is better)
Translates to: CLREEFGQEEGWRAAPCRPAHGE*MPHRPA
Trigger: TGCAGGACGATGTGGCATCCATTCACCGTGAGCTGG...CCGGCAGGGTGCGGCTCTCCATCCTTCTTCCTGCCCAAATTCCTCTCTTAGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000080932.8
ENSMUST00000205617.2
ENSMUST00000206728.2
3UTR CAA 72 bp AGTGTCTCTCGGCAAGACTTCACAGCCACCGGGGTATaGTCTGCACGAAGGCGGCCACTAAACACCTCTCCG +
Preference number: 4 (lower is better)
Translates to: SVSRQDFTATGV*SARRRPLNTSP
Trigger: CGGAGAGGTGTTTAGTGGCCGCCTTCGTGCAGACAATACCCCGGTGGCTGTGAAGTCTTGCCGAGAGACACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206744.2
CDS-3UTR TCA 90 bp CCCTGCCGGAAGCCCTGTTGCTGGTGGTTGGAACCCTGGTCTTGGAGCTGTCCATGCAAGGACATGTGGTaGAGCAATCCTGCATATTCC +
Preference number: 4 (lower is better)
Translates to: PCRKPCCWWLEPWSWSCPCKDMW*SNPAYS
Trigger: GGAATATGCAGGATTGCTTCACCACATGTCCTTGCA...TGGACAGCTCCAAGACCAGGGTTCCAACCACCAGCAACAGGGCTTCCGGCAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080932.8
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206728.2
ENSMUST00000206744.2
CDS-3UTR TCA 90 bp GCACCCTGCCGGAAGCCCTGTTGCTGGTGGTTGGAACCCTGGTCTTGGAGCTGTTGCAAGGACATGTGGTaGAGCAATCCTGCATATTCC +
Preference number: 4 (lower is better)
Translates to: APCRKPCCWWLEPWSWSCCKDMW*SNPAYS
Trigger: GGAATATGCAGGATTGCTTCACCACATGTCCTTGCA...ACAGCTCCAAGACCAGGGTTCCAACCACCAGCAACAGGGCTTCCGGCAGGGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080932.8
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206728.2
ENSMUST00000206744.2
CDS-3UTR TCA 90 bp CAGTGGTGGAGGGATAGAGAACTTGGGGCGGAAGATTCCGGAGAAGTGGCTTTTGTGCAAATCCTGCAGTaGCTGCAGCAGGCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: QWWRDRELGAEDSGEVAFVQILQ*LQQARQ
Trigger: CTGCCTGGCCTGCTGCAGTCACTGCAGGATTTGCAC...AAAAGCCACTTCTCCGGAATCTTCCGCCCCAAGTTCTCTATCCCTCCACCACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000205617.2
CDS-3UTR GCA 90 bp ACCCTGCCGGAAGCCCTGTTGCTGGTGGTTGGAACCCTGGTCTTGGAGCTGTCCGTGGTGAAGCAATCCTaGATATTCCCGGTCACTCTT +
Preference number: 4 (lower is better)
Translates to: TLPEALLLVVGTLVLELSVVKQS*IFPVTL
Trigger: AAGAGTGACCGGGAATATGCAGGATTGCTTCACCAC...GGACAGCTCCAAGACCAGGGTTCCAACCACCAGCAACAGGGCTTCCGGCAGGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080932.8
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206728.2
ENSMUST00000206744.2
CDS-3UTR GCA 90 bp GGTGGAGGGATAGAGAACTTGGGGCGGAAGATTCCGGAGAAGTGGCTTTTAAGGTTGGTGAGCTCCTGCTaGAGCTGCTGCCACTGCTCG +
Preference number: 4 (lower is better)
Translates to: GGGIENLGRKIPEKWLLRLVSSC*SCCHCS
Trigger: CGAGCAGTGGCAGCAGCTGCAGCAGGAGCTCACCAA...CCTTAAAAGCCACTTCTCCGGAATCTTCCGCCCCAAGTTCTCTATCCCTCCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206744.2
CDS-3UTR GCA 90 bp CTAAGAGAGGAATTTGGGCAGGAAGAAGGATGGAGAGCCGCACCCTGCCGGAAGTCCTCGTGCAAATCCTaGAGTGACTGCAGCAGGCCA +
Preference number: 4 (lower is better)
Translates to: LREEFGQEEGWRAAPCRKSSCKS*SDCSRP
Trigger: TGGCCTGCTGCAGTCACTGCAGGATTTGCACGAGGA...CTTCCGGCAGGGTGCGGCTCTCCATCCTTCTTCCTGCCCAAATTCCTCTCTTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000080932.8
ENSMUST00000205617.2
ENSMUST00000206728.2
CDS-3UTR GCA 90 bp TTCTGCCTAAGAGAGGAATTTGGGCAGGAAGAAGGATGGAGAGCCGCACCCTGCCCCGCCATCTCCTCGTaGAAATCCTGCAGTGACTGC +
Preference number: 4 (lower is better)
Translates to: FCLREEFGQEEGWRAAPCPAISS*KSCSDC
Trigger: GCAGTCACTGCAGGATTTGCACGAGGAGATGGCGGG...GCAGGGTGCGGCTCTCCATCCTTCTTCCTGCCCAAATTCCTCTCTTAGGCAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000080932.8
ENSMUST00000205617.2
ENSMUST00000206728.2
CDS-3UTR GCA 90 bp ACCCTGGTCTTGGAGCTGTCCAGCAGTGAGTGGGAACTGCTGAGGAGGTACACGCGAGCTGCTCCATCTTaGTCTGCAGAAGTTCCTGCT +
Preference number: 4 (lower is better)
Translates to: TLVLELSSSEWELLRRYTRAAPS*SAEVPA
Trigger: AGCAGGAACTTCTGCAGAGCAAGATGGAGCAGCTCG...CGTGTACCTCCTCAGCAGTTCCCACTCACTGCTGGACAGCTCCAAGACCAGGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000080932.8
ENSMUST00000206728.2
CDS-3UTR GCA 90 bp CCTAAGAGAGGAATTTGGGCAGGAAGAAGGATGGAGAGCCGCACCCTGCCGGAAGACAGTACATACTCCTaGTTGCCCTGGCTCTCCCGA +
Preference number: 4 (lower is better)
Translates to: PKRGIWAGRRMESRTLPEDSTYS*LPWLSR
Trigger: TCGGGAGAGCCAGGGCAAGCAGGAGTATGTACTGTC...TTCCGGCAGGGTGCGGCTCTCCATCCTTCTTCCTGCCCAAATTCCTCTCTTAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000080932.8
ENSMUST00000206728.2
CDS-3UTR GCA 90 bp CCTAAGAGAGGAATTTGGGCAGGAAGAAGGATGGAGAGCCGCACCCTGCCGGAAAGCACCAGGTCCTCGTaGTTCAGAACCCACTTGTCC +
Preference number: 4 (lower is better)
Translates to: PKRGIWAGRRMESRTLPESTRSS*FRTHLS
Trigger: GGACAAGTGGGTTCTGAAGCACGAGGACCTGGTGCT...TTCCGGCAGGGTGCGGCTCTCCATCCTTCTTCCTGCCCAAATTCCTCTCTTAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000080932.8
ENSMUST00000206728.2
CDS-3UTR GCA 90 bp TGCACAGTGCTATCTGCAACCCTTGTATTGCCTCTTGCAGCATCTGCCTCTTGCTGGGCCCCCACCACATaGACCCCAACAGAGCCAACC +
Preference number: 4 (lower is better)
Translates to: CTVLSATLVLPLAASASCWAPTT*TPTEPT
Trigger: GGTTGGCTCTGTTGGGGTGCATGTGGTGGGGGCCCA...GCAAGAGGCAGATGCTGCAAGAGGCAATACAAGGGTTGCAGATAGCACTGTGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000205617.2
CDS-3UTR CCA 90 bp CCTAAGAGAGGAATTTGGGCAGGAAGAAGGATGGAGAGCCGCACCCTGCCGGAATCAATGTCCTGGCTGTaGGTCTTGGTGAGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: PKRGIWAGRRMESRTLPESMSWL*VLVSSC
Trigger: GCAGGAGCTCACCAAGACCCACAGCCAGGACATTGA...TTCCGGCAGGGTGCGGCTCTCCATCCTTCTTCCTGCCCAAATTCCTCTCTTAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080932.8
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206728.2
ENSMUST00000206744.2
CDS-3UTR CCA 90 bp TCGTGCTTCAGAACCCACTTGTCCTTGGGCACCGCCCTGAACAGGACAACACCATCAATGTCCTGGCTGTaGGTCTTGGTGAGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: SCFRTHLSLGTALNRTTPSMSWL*VLVSSC
Trigger: GCAGGAGCTCACCAAGACCCACAGCCAGGACATTGA...TGGTGTTGTCCTGTTCAGGGCGGTGCCCAAGGACAAGTGGGTTCTGAAGCACGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206744.2
CDS-3UTR CCA 90 bp TCCCACATCACAGACAGTACATACTCCTGCTTGCCCTGGCTCTCCCGAACCAGGTCAATGTCCTGGCTGTaGGTCTTGGTGAGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: SHITDSTYSCLPWLSRTRSMSWL*VLVSSC
Trigger: GCAGGAGCTCACCAAGACCCACAGCCAGGACATTGA...CCTGGTTCGGGAGAGCCAGGGCAAGCAGGAGTATGTACTGTCTGTGATGTGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206744.2
CDS-3UTR CCA 90 bp CTAAGAGAGGAATTTGGGCAGGAAGAAGGATGGAGAGCCGCACCCTGCCGGAAGTCAATGTCCTGGCTGTaGGTCTTGGTGAGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: LREEFGQEEGWRAAPCRKSMSWL*VLVSSC
Trigger: GCAGGAGCTCACCAAGACCCACAGCCAGGACATTGA...CTTCCGGCAGGGTGCGGCTCTCCATCCTTCTTCCTGCCCAAATTCCTCTCTTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080932.8
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206728.2
ENSMUST00000206744.2
CDS-3UTR CCA 90 bp TGCCTAAGAGAGGAATTTGGGCAGGAAGAAGGATGGAGAGCCGCACCCTGCCGGAGCTTCTCAATGTCCTaGCTGTGGGTCTTGGTGAGC +
Preference number: 4 (lower is better)
Translates to: CLREEFGQEEGWRAAPCRSFSMS*LWVLVS
Trigger: GCTCACCAAGACCCACAGCCAGGACATTGAGAAGCT...CCGGCAGGGTGCGGCTCTCCATCCTTCTTCCTGCCCAAATTCCTCTCTTAGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080932.8
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206728.2
ENSMUST00000206744.2
CDS-3UTR CCA 90 bp CCGATCTGCTCTCCCAGCACCAGGTCCTCGTGCTTCAGAACCCACTTGTCCTTGAGCTTCTCAATGTCCTaGCTGTGGGTCTTGGTGAGC +
Preference number: 4 (lower is better)
Translates to: PICSPSTRSSCFRTHLSLSFSMS*LWVLVS
Trigger: GCTCACCAAGACCCACAGCCAGGACATTGAGAAGCT...CAAGGACAAGTGGGTTCTGAAGCACGAGGACCTGGTGCTGGGAGAGCAGATCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206744.2
CDS-3UTR CCA 90 bp AGAGGAATTTGGGCAGGAAGAAGGATGGAGAGCCGCACCCTGCCGGAAGCCCTGAAAAGTGACACAAGGTaGCACATCAGGGGTGGATCC +
Preference number: 4 (lower is better)
Translates to: RGIWAGRRMESRTLPEALKSDTR*HIRGGS
Trigger: GGATCCACCCCTGATGTGCCACCTTGTGTCACTTTT...CAGGGCTTCCGGCAGGGTGCGGCTCTCCATCCTTCTTCCTGCCCAAATTCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000080932.8
ENSMUST00000205617.2
ENSMUST00000206728.2
CDS-3UTR CCA 90 bp CTGGTGGTTGGAACCCTGGTCTTGGAGCTGTCCAGCAGTGAGTGGGAACTGCTGATGAAATGTCGGGGCTaGCCATCCCACATCACAGAC +
Preference number: 4 (lower is better)
Translates to: LVVGTLVLELSSSEWELLMKCRG*PSHITD
Trigger: GTCTGTGATGTGGGATGGCCAGCCCCGACATTTCAT...CAGCAGTTCCCACTCACTGCTGGACAGCTCCAAGACCAGGGTTCCAACCACCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000080932.8
ENSMUST00000206728.2
CDS-3UTR CCA 90 bp GGTGGAGGGATAGAGAACTTGGGGCGGAAGATTCCGGAGAAGTGGCTTTTAAGGCCTTTGCTGGCTTCCTaGTACTTGCGCCTGGCCTGG +
Preference number: 4 (lower is better)
Translates to: GGGIENLGRKIPEKWLLRPLLAS*YLRLAW
Trigger: CCAGGCCAGGCGCAAGTACCAGGAAGCCAGCAAAGG...CCTTAAAAGCCACTTCTCCGGAATCTTCCGCCCCAAGTTCTCTATCCCTCCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000206744.2
3UTR CAA 72 bp TCCGGCACGAGCTGCAGTGGTGGAGGGATAGAGAACTaGGGGCGGAAGATTCCGGAGAAGTGGCTTTTAAGG +
Preference number: 4 (lower is better)
Translates to: SGTSCSGGGIEN*GRKIPEKWLLR
Trigger: CCTTAAAAGCCACTTCTCCGGAATCTTCCGCCCCAAGTTCTCTATCCCTCCACCACTGCAGCTCGTGCCGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206744.2
CDS-3UTR GCA 90 bp CTATCTGCAACCCTTGTATTGCCTCTTGCAGCATCTGCCTCTTGCTCAGAAGCTCGCAGCTCAGCTTCCTaGATCTGCTGCACTGCCCCG +
Preference number: 4 (lower is better)
Translates to: LSATLVLPLAASASCSEARSSAS*ICCTAP
Trigger: CGGGGCAGTGCAGCAGATGCAGGAAGCTGAGCTGCG...AGCTTCTGAGCAAGAGGCAGATGCTGCAAGAGGCAATACAAGGGTTGCAGATAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206744.2
CDS-3UTR GCA 90 bp AAGGCAGACGATGCCCTAGGAGGACAGGTGCAATGTGCCAAGTATGAGAAGGGACGAGTTCAGATCTTCTaGATGCTGCCGCAGCACCCG +
Preference number: 4 (lower is better)
Translates to: KADDALGGQVQCAKYEKGRVQIF*MLPQHP
Trigger: CGGGTGCTGCGGCAGCATGCAGAAGATCTGAACTCG...TCCCTTCTCATACTTGGCACATTGCACCTGTCCTCCTAGGGCATCGTCTGCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206479.2
CDS-3UTR GCA 90 bp AGAAGGATGGAGAGCCGCACCCTGCCGGAAGCCCTGTTGCTGGTGGTTGGAACCATCTCCAGGTATTCCTaGAGGATGTCCTTCAGAATG +
Preference number: 4 (lower is better)
Translates to: RRMESRTLPEALLLVVGTISRYS*RMSFRM
Trigger: CATTCTGAAGGACATCCTGCAGGAATACCTGGAGAT...GGTTCCAACCACCAGCAACAGGGCTTCCGGCAGGGTGCGGCTCTCCATCCTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000080932.8
ENSMUST00000205617.2
ENSMUST00000206728.2
CDS-3UTR CCA 90 bp CCTAAGAGAGGAATTTGGGCAGGAAGAAGGATGGAGAGCCGCACCCTGCCGGAAAGCTTCTCAATGTCCTaGCTGTGGGTCTTGGTGAGC +
Preference number: 4 (lower is better)
Translates to: PKRGIWAGRRMESRTLPESFSMS*LWVLVS
Trigger: GCTCACCAAGACCCACAGCCAGGACATTGAGAAGCT...TTCCGGCAGGGTGCGGCTCTCCATCCTTCTTCCTGCCCAAATTCCTCTCTTAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080932.8
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206728.2
ENSMUST00000206744.2
CDS-3UTR CCA 90 bp GTGGTTGGAACCCTGGTCTTGGAGCTGTCCAGCAGTGAGTGGGAACTGCTGAGGAAAAGTGACACAAGGTaGCACATCAGGGGTGGATCC +
Preference number: 4 (lower is better)
Translates to: VVGTLVLELSSSEWELLRKSDTR*HIRGGS
Trigger: GGATCCACCCCTGATGTGCCACCTTGTGTCACTTTT...CCTCAGCAGTTCCCACTCACTGCTGGACAGCTCCAAGACCAGGGTTCCAACCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000080932.8
ENSMUST00000205617.2
ENSMUST00000206728.2
CDS-3UTR CCA 90 bp ATGGAGAGCCGCACCCTGCCGGAAGCCCTGTTGCTGGTGGTTGGAACCCTGGTCAAGATTCCGGAGAAGTaGCTTTTAAGGATCTCCAGT +
Preference number: 4 (lower is better)
Translates to: MESRTLPEALLLVVGTLVKIPEK*LLRISS
Trigger: ACTGGAGATCCTTAAAAGCCACTTCTCCGGAATCTT...GACCAGGGTTCCAACCACCAGCAACAGGGCTTCCGGCAGGGTGCGGCTCTCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000080932.8
ENSMUST00000206728.2
CDS-3UTR CCA 90 bp GGAGAGCCGCACCCTGCCGGAAGCCCTGTTGCTGGTGGTTGGAACCCTGGTCTTAAGATTCCGGAGAAGTaGCTTTTAAGGATCTCCAGT +
Preference number: 4 (lower is better)
Translates to: GEPHPAGSPVAGGWNPGLKIPEK*LLRISS
Trigger: ACTGGAGATCCTTAAAAGCCACTTCTCCGGAATCTT...AAGACCAGGGTTCCAACCACCAGCAACAGGGCTTCCGGCAGGGTGCGGCTCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000080932.8
ENSMUST00000206728.2
3UTR CAA 72 bp TGGTGGGCAAAGAGCTTCCACAGGCTCCGGACATACTaGTCTTTGGCCTTGTCTCGATCCTTGTCTGCCAGG +
Preference number: 4 (lower is better)
Translates to: WWAKSFHRLRTY*SLALSRSLSAR
Trigger: CCTGGCAGACAAGGATCGAGACAAGGCCAAAGACAAGTATGTCCGGAGCCTGTGGAAGCTCTTTGCCCACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206744.2
CDS-3UTR TCA 90 bp TTATCTGAGGACTGGATGATGAAATGTCGGGGCTGGCCATCCCACATCACAGACATTCCCGGTCACTCTTaGCCCTCTGGGCCATCCACT +
Preference number: 4 (lower is better)
Translates to: LSEDWMMKCRGWPSHITDIPGHS*PSGPST
Trigger: AGTGGATGGCCCAGAGGGTCAAGAGTGACCGGGAAT...GTCTGTGATGTGGGATGGCCAGCCCCGACATTTCATCATCCAGTCCTCAGATAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000205617.2
ENSMUST00000206744.2
CDS-3UTR TCA 90 bp CTCATAGAGAGGCTTCTGCACCTCCGGCACGAGCTGCAGTGGTGGAGGGATAGATGCAAGGACATGTGGTaGAGCAATCCTGCATATTCC +
Preference number: 4 (lower is better)
Translates to: LIERLLHLRHELQWWRDRCKDMW*SNPAYS
Trigger: GGAATATGCAGGATTGCTTCACCACATGTCCTTGCA...TCTATCCCTCCACCACTGCAGCTCGTGCCGGAGGTGCAGAAGCCTCTCTATGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206744.2
CDS-3UTR TCA 90 bp CTAAGAGAGGAATTTGGGCAGGAAGAAGGATGGAGAGCCGCACCCTGCCGGAAGGCGACTCATCAAAAGTaGCACAAGGTGGCACATCAG +
Preference number: 4 (lower is better)
Translates to: LREEFGQEEGWRAAPCRKATHQK*HKVAHQ
Trigger: CTGATGTGCCACCTTGTGTCACTTTTGATGAGTCGC...CTTCCGGCAGGGTGCGGCTCTCCATCCTTCTTCCTGCCCAAATTCCTCTCTTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000080932.8
ENSMUST00000205617.2
ENSMUST00000206728.2
CDS-3UTR TCA 90 bp CGGGTCTCACCGATGCCGCTTGCGGATACTGTGGAGCTCCTGGCAGATGATGCTACATCCCAAAGTCGCTaGTCTTCAGGACATTCTTCT +
Preference number: 4 (lower is better)
Translates to: RVSPMPLADTVELLADDATSQSR*SSGHSS
Trigger: AGAAGAATGTCCTGAAGATCAGCGACTTTGGGATGT...AGCATCATCTGCCAGGAGCTCCACAGTATCCGCAAGCGGCATCGGTGAGACCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206735.2
CDS-3UTR GCA 90 bp CACCGATGCCGCTTGCGGATACTGTGGAGCTCCTGGCAGATGATGCTGAAACTACCATCCACTTCCTCATaGCCTCCAATAAGCGCAGCT +
Preference number: 4 (lower is better)
Translates to: HRCRLRILWSSWQMMLKLPSTSS*PPISAA
Trigger: AGCTGCGCTTATTGGAGGGCATGAGGAAGTGGATGG...TAGTTTCAGCATCATCTGCCAGGAGCTCCACAGTATCCGCAAGCGGCATCGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206744.2
CDS-3UTR GCA 90 bp CATGACGATGTAGATCGGCTGTTTCTGTGTGCAGACCCCGATGAGACGCACAATTGGCTTCCTGGTACTTaGGCCTGGCCTGGGTGCTAT +
Preference number: 4 (lower is better)
Translates to: HDDVDRLFLCADPDETHNWLPGT*AWPGCY
Trigger: ATAGCACCCAGGCCAGGCGCAAGTACCAGGAAGCCA...ATTGTGCGTCTCATCGGGGTCTGCACACAGAAACAGCCGATCTACATCGTCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000205617.2
ENSMUST00000206744.2
CDS-3UTR GCA 90 bp CGGGTCTCACCGATGCCGCTTGCGGATACTGTGGAGCTCCTGGCAGATGATGCTATCTCCAGGTATTCCTaGAGGATGTCCTTCAGAATG +
Preference number: 4 (lower is better)
Translates to: RVSPMPLADTVELLADDAISRYS*RMSFRM
Trigger: CATTCTGAAGGACATCCTGCAGGAATACCTGGAGAT...AGCATCATCTGCCAGGAGCTCCACAGTATCCGCAAGCGGCATCGGTGAGACCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000205617.2
CDS-3UTR CCA 90 bp CTCAGCACCTCTTTGGTGGCCACAGCCAGTTCATCTGTCACAGAAGTCAGCGTGTCACTCTTGACCCTCTaGGCCATCCACTTCCTCATG +
Preference number: 4 (lower is better)
Translates to: LSTSLVATASSSVTEVSVSLLTL*AIHFLM
Trigger: CATGAGGAAGTGGATGGCCCAGAGGGTCAAGAGTGA...CACGCTGACTTCTGTGACAGATGAACTGGCTGTGGCCACCAAAGAGGTGCTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000206479.2
ENSMUST00000206744.2
CDS-3UTR CCA 90 bp TTCTGCCTAAGAGAGGAATTTGGGCAGGAAGAAGGATGGAGAGCCGCACCCTGCAGCTTCTCAATGTCCTaGCTGTGGGTCTTGGTGAGC +
Preference number: 4 (lower is better)
Translates to: FCLREEFGQEEGWRAAPCSFSMS*LWVLVS
Trigger: GCTCACCAAGACCCACAGCCAGGACATTGAGAAGCT...GCAGGGTGCGGCTCTCCATCCTTCTTCCTGCCCAAATTCCTCTCTTAGGCAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080932.8
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206728.2
ENSMUST00000206744.2
CDS-3UTR CCA 90 bp AGAGGAATTTGGGCAGGAAGAAGGATGGAGAGCCGCACCCTGCCGGAAGCCCTGGGACATACTTGTCTTTaGCCTTGTCTCGATCCTTGT +
Preference number: 4 (lower is better)
Translates to: RGIWAGRRMESRTLPEALGHTCL*PCLDPC
Trigger: ACAAGGATCGAGACAAGGCCAAAGACAAGTATGTCC...CAGGGCTTCCGGCAGGGTGCGGCTCTCCATCCTTCTTCCTGCCCAAATTCCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080932.8
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206728.2
CDS-3UTR TCA 90 bp TCTCACCGATGCCGCTTGCGGATACTGTGGAGCTCCTGGCAGATGATGCTGAAAGCGACTCATCAAAAGTaGCACAAGGTGGCACATCAG +
Preference number: 4 (lower is better)
Translates to: SHRCRLRILWSSWQMMLKATHQK*HKVAHQ
Trigger: CTGATGTGCCACCTTGTGTCACTTTTGATGAGTCGC...TTTCAGCATCATCTGCCAGGAGCTCCACAGTATCCGCAAGCGGCATCGGTGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000205617.2
CDS-3UTR GCA 90 bp CTAAGAGAGGAATTTGGGCAGGAAGAAGGATGGAGAGCCGCACCCTGCCGGAAGGTGGTGAAGCAATCCTaGATATTCCCGGTCACTCTT +
Preference number: 4 (lower is better)
Translates to: LREEFGQEEGWRAAPCRKVVKQS*IFPVTL
Trigger: AAGAGTGACCGGGAATATGCAGGATTGCTTCACCAC...CTTCCGGCAGGGTGCGGCTCTCCATCCTTCTTCCTGCCCAAATTCCTCTCTTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080932.8
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206728.2
ENSMUST00000206744.2
CDS-3UTR GCA 90 bp CTGGTCTTGGAGCTGTCCAGCAGTGAGTGGGAACTGCTGAGGAGGTACACGCTCCTGTTTCAGGATCCTTaGTTCTTGCAGAAACTTGGC +
Preference number: 4 (lower is better)
Translates to: LVLELSSSEWELLRRYTLLFQDP*FLQKLG
Trigger: GCCAAGTTTCTGCAAGAAGCAAGGATCCTGAAACAG...GAGCGTGTACCTCCTCAGCAGTTCCCACTCACTGCTGGACAGCTCCAAGACCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000080932.8
ENSMUST00000206728.2
CDS-3UTR GCA 90 bp CTGCCTAAGAGAGGAATTTGGGCAGGAAGAAGGATGGAGAGCCGCACCCTGCCGCTGTTTCAGGATCCTTaGTTCTTGCAGAAACTTGGC +
Preference number: 4 (lower is better)
Translates to: LPKRGIWAGRRMESRTLPLFQDP*FLQKLG
Trigger: GCCAAGTTTCTGCAAGAAGCAAGGATCCTGAAACAG...CGGCAGGGTGCGGCTCTCCATCCTTCTTCCTGCCCAAATTCCTCTCTTAGGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000080932.8
ENSMUST00000206728.2
CDS-3UTR CCA 90 bp ACTTGTTTTATTTTTCTGCCTAAGAGAGGAATTTGGGCAGGAAGAAGGATGGAGTGCTGCACTGCCCCGTaGCCCTGGGGGCTGCACAGC +
Preference number: 4 (lower is better)
Translates to: TCFIFLPKRGIWAGRRMECCTAP*PWGLHS
Trigger: GCTGTGCAGCCCCCAGGGCCACGGGGCAGTGCAGCA...CTCCATCCTTCTTCCTGCCCAAATTCCTCTCTTAGGCAGAAAAATAAAACAAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENSMUST00000080932.8
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206744.2
CDS-3UTR CCA 90 bp GTGGTTGGAACCCTGGTCTTGGAGCTGTCCAGCAGTGAGTGGGAACTGCTGAGGATACTGTGGAGCTCCTaGCAGATGATGCTGAAACTA +
Preference number: 4 (lower is better)
Translates to: VVGTLVLELSSSEWELLRILWSS*QMMLKL
Trigger: TAGTTTCAGCATCATCTGCCAGGAGCTCCACAGTAT...CCTCAGCAGTTCCCACTCACTGCTGGACAGCTCCAAGACCAGGGTTCCAACCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000080932.8
ENSMUST00000206728.2
3UTR CAA 72 bp TGTCCTGGCTGCACAGTGCTATCTGCAACCCTTGTATaGCCTCTTGCAGCATCTGCCTCTTGCTCAGAAGCT +
Preference number: 4 (lower is better)
Translates to: CPGCTVLSATLV*PLAASASCSEA
Trigger: AGCTTCTGAGCAAGAGGCAGATGCTGCAAGAGGCAATACAAGGGTTGCAGATAGCACTGTGCAGCCAGGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206744.2
3UTR CAA 72 bp AAGCTTGTCCTGGCTGCACAGTGCTATCTGCAACCCTaGTATTGCCTCTTGCAGCATCTGCCTCTTGCTCAG +
Preference number: 4 (lower is better)
Translates to: KLVLAAQCYLQP*YCLLQHLPLAQ
Trigger: CTGAGCAAGAGGCAGATGCTGCAAGAGGCAATACAAGGGTTGCAGATAGCACTGTGCAGCCAGGACAAGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206744.2
3UTR CAA 72 bp GGACAGGCCATCTTGTCCCCAATTGTCCATGCTGATTaGTCACCCTGGCTCTCTATGAAGACTCCCCCTTGT +
Preference number: 4 (lower is better)
Translates to: GQAILSPIVHAD*SPWLSMKTPPC
Trigger: ACAAGGGGGAGTCTTCATAGAGAGCCAGGGTGACAAATCAGCATGGACAATTGGGGACAAGATGGCCTGTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000205617.2
ENSMUST00000206479.2
3UTR CAA 72 bp TTGATGACCCACCTTGCTTCTTGCAGAAACTTGGCCTaGAGGTCAGGTGGGAGTGTCTCTCGGCAAGACTTC +
Preference number: 4 (lower is better)
Translates to: LMTHLASCRNLA*RSGGSVSRQDF
Trigger: GAAGTCTTGCCGAGAGACACTCCCACCTGACCTCAAGGCCAAGTTTCTGCAAGAAGCAAGGTGGGTCATCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206479.2
3UTR CAA 72 bp CTCGAGCCTCACTCATTTGATGACCCACCTTGCTTCTaGCAGAAACTTGGCCTTGAGGTCAGGTGGGAGTGT +
Preference number: 4 (lower is better)
Translates to: LEPHSFDDPPCF*QKLGLEVRWEC
Trigger: ACACTCCCACCTGACCTCAAGGCCAAGTTTCTGCAAGAAGCAAGGTGGGTCATCAAATGAGTGAGGCTCGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206479.2
3UTR CAA 72 bp ACACCTCTCACACAAGGGACCTCGAGCCTCACTCATTaGATGACCCACCTTGCTTCTTGCAGAAACTTGGCC +
Preference number: 4 (lower is better)
Translates to: TPLTQGTSSLTH*MTHLASCRNLA
Trigger: GGCCAAGTTTCTGCAAGAAGCAAGGTGGGTCATCAAATGAGTGAGGCTCGAGGTCCCTTGTGTGAGAGGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206479.2
3UTR CAA 72 bp GATTCCTTCCGATTCACTGCCCTTAAGGAACCACTCTaGGGGGCTGGAGAGATGGCTCAGTGGTTAAGAGCA +
Preference number: 4 (lower is better)
Translates to: DSFRFTALKEPL*GAGEMAQWLRA
Trigger: TGCTCTTAACCACTGAGCCATCTCTCCAGCCCCCAAGAGTGGTTCCTTAAGGGCAGTGAATCGGAAGGAATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000206479.2
CDS-3UTR TCA 90 bp CTAAGAGAGGAATTTGGGCAGGAAGAAGGATGGAGAGCCGCACCCTGCCGGAAGACATCCCAAAGTCGCTaGTCTTCAGGACATTCTTCT +
Preference number: 4 (lower is better)
Translates to: LREEFGQEEGWRAAPCRKTSQSR*SSGHSS
Trigger: AGAAGAATGTCCTGAAGATCAGCGACTTTGGGATGT...CTTCCGGCAGGGTGCGGCTCTCCATCCTTCTTCCTGCCCAAATTCCTCTCTTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000080932.8
ENSMUST00000206728.2
ENSMUST00000206735.2
CDS-3UTR CCA 90 bp CCTAAGAGAGGAATTTGGGCAGGAAGAAGGATGGAGAGCCGCACCCTGCCGGAAATACTGTGGAGCTCCTaGCAGATGATGCTGAAACTA +
Preference number: 4 (lower is better)
Translates to: PKRGIWAGRRMESRTLPEILWSS*QMMLKL
Trigger: TAGTTTCAGCATCATCTGCCAGGAGCTCCACAGTAT...TTCCGGCAGGGTGCGGCTCTCCATCCTTCTTCCTGCCCAAATTCCTCTCTTAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000080932.8
ENSMUST00000206728.2
CDS-3UTR TCA 90 bp CAATGTTGGGGTGGTTGTACTGTTTCAGGATCCTTGCTTCTTGCAGAAACTTGGATTCCCGGTCACTCTTaGCCCTCTGGGCCATCCACT +
Preference number: 4 (lower is better)
Translates to: QCWGGCTVSGSLLLAETWIPGHS*PSGPST
Trigger: AGTGGATGGCCCAGAGGGTCAAGAGTGACCGGGAAT...CCAAGTTTCTGCAAGAAGCAAGGATCCTGAAACAGTACAACCACCCCAACATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000205617.2
ENSMUST00000206744.2
CDS-3UTR GCA 90 bp GACCCCGATGAGACGCACAATGTTGGGGTGGTTGTACTGTTTCAGGATCCTTGCGTGGTGAAGCAATCCTaGATATTCCCGGTCACTCTT +
Preference number: 4 (lower is better)
Translates to: DPDETHNVGVVVLFQDPCVVKQS*IFPVTL
Trigger: AAGAGTGACCGGGAATATGCAGGATTGCTTCACCAC...GCAAGGATCCTGAAACAGTACAACCACCCCAACATTGTGCGTCTCATCGGGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000205617.2
ENSMUST00000206744.2
CDS-3UTR CCA 90 bp CTTGTTTTATTTTTCTGCCTAAGAGAGGAATTTGGGCAGGAAGAAGGATGGAGAACTGCCCCGTGGCCCTaGGGGCTGCACAGCTCTGAA +
Preference number: 4 (lower is better)
Translates to: LVLFFCLREEFGQEEGWRTAPWP*GLHSSE
Trigger: TTCAGAGCTGTGCAGCCCCCAGGGCCACGGGGCAGT...TCTCCATCCTTCTTCCTGCCCAAATTCCTCTCTTAGGCAGAAAAATAAAACAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENSMUST00000080932.8
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206744.2
3UTR CAA 72 bp TGTTTCAGGATCCTTGCTTCTTGCAGAAACTTGGCCTaGAGGTCAGGTGGGAGTGTCTCTCGGCAAGACTTC +
Preference number: 4 (lower is better)
Translates to: CFRILASCRNLA*RSGGSVSRQDF
Trigger: GAAGTCTTGCCGAGAGACACTCCCACCTGACCTCAAGGCCAAGTTTCTGCAAGAAGCAAGGATCCTGAAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000205617.2
ENSMUST00000206744.2
3UTR CAA 72 bp GTGCAGACCCCGATGAGACGCACAATGTTGGGGTGGTaGTACTGTTTCAGGATCCTTGCTTCTTGCAGAAAC +
Preference number: 4 (lower is better)
Translates to: VQTPMRRTMLGW*YCFRILASCRN
Trigger: GTTTCTGCAAGAAGCAAGGATCCTGAAACAGTACAACCACCCCAACATTGTGCGTCTCATCGGGGTCTGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000205617.2
ENSMUST00000206744.2
3UTR CAA 72 bp ACTCATTTGATGACCCACCTTGCTTCTTGCAGAAACTaGGCCTTGAGGTCAGGTGGGAGTGTCTCTCGGCAA +
Preference number: 4 (lower is better)
Translates to: THLMTHLASCRN*ALRSGGSVSRQ
Trigger: TTGCCGAGAGACACTCCCACCTGACCTCAAGGCCAAGTTTCTGCAAGAAGCAAGGTGGGTCATCAAATGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206479.2
CDS-3UTR CCA 90 bp ACTTGTTTTATTTTTCTGCCTAAGAGAGGAATTTGGGCAGGAAGAAGGATGGAGATCTCTGCCCAGGACTaGCTGACAGGGCTGTCGGGG +
Preference number: 4 (lower is better)
Translates to: TCFIFLPKRGIWAGRRMEISAQD*LTGLSG
Trigger: CCCCGACAGCCCTGTCAGCCAGTCCTGGGCAGAGAT...CTCCATCCTTCTTCCTGCCCAAATTCCTCTCTTAGGCAGAAAAATAAAACAAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000080932.8
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206744.2
3UTR CAA 72 bp TTGTACTGTTTCAGGATCCTTGCTTCTTGCAGAAACTaGGCCTTGAGGTCAGGTGGGAGTGTCTCTCGGCAA +
Preference number: 4 (lower is better)
Translates to: LYCFRILASCRN*ALRSGGSVSRQ
Trigger: TTGCCGAGAGACACTCCCACCTGACCTCAAGGCCAAGTTTCTGCAAGAAGCAAGGATCCTGAAACAGTACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000205617.2
ENSMUST00000206744.2
3UTR CAA 72 bp TGTTTCTGTGTGCAGACCCCGATGAGACGCACAATGTaGGGGTGGTTGTACTGTTTCAGGATCCTTGCTTCT +
Preference number: 4 (lower is better)
Translates to: CFCVQTPMRRTM*GWLYCFRILAS
Trigger: AGAAGCAAGGATCCTGAAACAGTACAACCACCCCAACATTGTGCGTCTCATCGGGGTCTGCACACAGAAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000205617.2
ENSMUST00000206744.2
CDS-3UTR GCA 90 bp AATGTTGGGGTGGTTGTACTGTTTCAGGATCCTTGCTTCTTGCAGAAACTTGGCACTGGGTTTTCTCCCTaGCAGGAAGAAGAGCGAACC +
Preference number: 4 (lower is better)
Translates to: NVGVVVLFQDPCFLQKLGTGFSP*QEEERT
Trigger: GGTTCGCTCTTCTTCCTGGCAGGGAGAAAACCCAGT...GCCAAGTTTCTGCAAGAAGCAAGGATCCTGAAACAGTACAACCACCCCAACATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000206744.2
CDS-3UTR CCA 90 bp TGCACAGTGCTATCTGCAACCCTTGTATTGCCTCTTGCAGCATCTGCCTCTTGCGGACATACTTGTCTTTaGCCTTGTCTCGATCCTTGT +
Preference number: 4 (lower is better)
Translates to: CTVLSATLVLPLAASASCGHTCL*PCLDPC
Trigger: ACAAGGATCGAGACAAGGCCAAAGACAAGTATGTCC...GCAAGAGGCAGATGCTGCAAGAGGCAATACAAGGGTTGCAGATAGCACTGTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000205617.2
ENSMUST00000206479.2
CDS-3UTR GCA 90 bp CTTGTTTTATTTTTCTGCCTAAGAGAGGAATTTGGGCAGGAAGAAGGATGGAGACCATCCACTTCCTCATaGCCTCCAATAAGCGCAGCT +
Preference number: 4 (lower is better)
Translates to: LVLFFCLREEFGQEEGWRPSTSS*PPISAA
Trigger: AGCTGCGCTTATTGGAGGGCATGAGGAAGTGGATGG...TCTCCATCCTTCTTCCTGCCCAAATTCCTCTCTTAGGCAGAAAAATAAAACAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000080932.8
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206744.2
CDS-3UTR CCA 90 bp CTTGTTTTATTTTTCTGCCTAAGAGAGGAATTTGGGCAGGAAGAAGGATGGAGATCACTCTTGACCCTCTaGGCCATCCACTTCCTCATG +
Preference number: 4 (lower is better)
Translates to: LVLFFCLREEFGQEEGWRSLLTL*AIHFLM
Trigger: CATGAGGAAGTGGATGGCCCAGAGGGTCAAGAGTGA...TCTCCATCCTTCTTCCTGCCCAAATTCCTCTCTTAGGCAGAAAAATAAAACAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000080932.8
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206744.2
CDS-3UTR GCA 90 bp CTTGTTTTATTTTTCTGCCTAAGAGAGGAATTTGGGCAGGAAGAAGGATGGAGATTTCCAAGTATTCCATaGCAGCAGCTGCGTCCCCTA +
Preference number: 4 (lower is better)
Translates to: LVLFFCLREEFGQEEGWRFPSIP*QQLRPL
Trigger: TAGGGGACGCAGCTGCTGGCATGGAATACTTGGAAA...TCTCCATCCTTCTTCCTGCCCAAATTCCTCTCTTAGGCAGAAAAATAAAACAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000080932.8
3UTR CAA 72 bp GTGACATGGGAAATCCAGAAATCACTTTTCTTTGGGTaGGGAAAGCATTCTGATTGGAAAGTGGCTGGCATT +
Preference number: 4 (lower is better)
Translates to: VTWEIQKSLFFG*GKHSDWKVAGI
Trigger: AATGCCAGCCACTTTCCAATCAGAATGCTTTCCCAACCCAAAGAAAAGTGATTTCTGGATTTCCCATGTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000205617.2
ENSMUST00000206479.2
CDS-3UTR CCA 90 bp ACTTGTTTTATTTTTCTGCCTAAGAGAGGAATTTGGGCAGGAAGAAGGATGGAGGGACATACTTGTCTTTaGCCTTGTCTCGATCCTTGT +
Preference number: 4 (lower is better)
Translates to: TCFIFLPKRGIWAGRRMEGHTCL*PCLDPC
Trigger: ACAAGGATCGAGACAAGGCCAAAGACAAGTATGTCC...CTCCATCCTTCTTCCTGCCCAAATTCCTCTCTTAGGCAGAAAAATAAAACAAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000080932.8
ENSMUST00000205617.2
ENSMUST00000206479.2
CDS CCA 90 bp CCCCCACCACATGCACCCCAACAGAGCCAACCTAGCCTGGCCACCTaGCCAAGGGCTCCCTGCCCACACCCACACGTGGGTAGCGTGACA +
Preference number: 5 (lower is better)
Translates to: PPPHAPQQSQPSLAT*PRAPCPHPHVGSVT
Trigger: TGTCACGCTACCCACGTGTGGGTGTGGGCAGGGAGCCCTTGGCCAGGTGGCCAGGCTAGGTTGGCTCTGTTGGGGTGCATGTGGTGGGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000205617.2
CDS CCA 90 bp AAGCTGGGCCCCCACCACATGCACCCCAACAGAGCCAACCTAGCCTaGCCACCTGGCCAAGGGCTCCCTGCCCACACCCACACGTGGGTA +
Preference number: 5 (lower is better)
Translates to: KLGPHHMHPNRANLA*PPGQGLPAHTHTWV
Trigger: TACCCACGTGTGGGTGTGGGCAGGGAGCCCTTGGCCAGGTGGCCAGGCTAGGTTGGCTCTGTTGGGGTGCATGTGGTGGGGGCCCAGCTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000205617.2
CDS-3UTR CAA 90 bp AGCGGCACGGCTGGGGGCTCGCCCGTGCCGAGCTGCTCCATCTTGCTCTGCAGATATTCCCGGTCACTCTaGACCCTCTGGGCCATCCAC +
Preference number: 5 (lower is better)
Translates to: SGTAGGSPVPSCSILLCRYSRSL*TLWAIH
Trigger: GTGGATGGCCCAGAGGGTCAAGAGTGACCGGGAATA...TCTGCAGAGCAAGATGGAGCAGCTCGGCACGGGCGAGCCCCCAGCCGTGCCGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206744.2
CDS-3UTR CAA 90 bp CAGCTGCGTCCCCTACCATCTGCAGCAGAGTCTTCACCCGCAGGCGGGCTCCCTCTGGCTTCCTGGTACTaGCGCCTGGCCTGGGTGCTA +
Preference number: 5 (lower is better)
Translates to: QLRPLPSAAESSPAGGLPLASWY*RLAWVL
Trigger: TAGCACCCAGGCCAGGCGCAAGTACCAGGAAGCCAG...AGGGAGCCCGCCTGCGGGTGAAGACTCTGCTGCAGATGGTAGGGGACGCAGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000205617.2
ENSMUST00000206744.2
CDS GCA 90 bp CCCCAACAGAGCCAACCTAGCCTGGCCACCTGGCCAAGGGCTCCCTaGCCACACCCACACGTGGGTAGCGTGACAGAGGAGTACACACGT +
Preference number: 5 (lower is better)
Translates to: PQQSQPSLATWPRAP*PHPHVGSVTEEYTR
Trigger: ACGTGTGTACTCCTCTGTCACGCTACCCACGTGTGGGTGTGGGCAGGGAGCCCTTGGCCAGGTGGCCAGGCTAGGTTGGCTCTGTTGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000205617.2
CDS-3UTR CAA 90 bp TGGGCAGGAAGAAGGATGGAGAGCCGCACCCTGCCGGAAGCCCTGTTGCTGGTGTCCTGGCTGTGGGTCTaGGTGAGCTCCTGCTGCAGC +
Preference number: 5 (lower is better)
Translates to: WAGRRMESRTLPEALLLVSWLWV*VSSCCS
Trigger: GCTGCAGCAGGAGCTCACCAAGACCCACAGCCAGGA...CACCAGCAACAGGGCTTCCGGCAGGGTGCGGCTCTCCATCCTTCTTCCTGCCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080932.8
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206728.2
ENSMUST00000206744.2
CDS-3UTR CAA 90 bp TGGAGAGCCGCACCCTGCCGGAAGCCCTGTTGCTGGTGGTTGGAACCCTGGTCTTCCTGGCTGTGGGTCTaGGTGAGCTCCTGCTGCAGC +
Preference number: 5 (lower is better)
Translates to: WRAAPCRKPCCWWLEPWSSWLWV*VSSCCS
Trigger: GCTGCAGCAGGAGCTCACCAAGACCCACAGCCAGGA...AGACCAGGGTTCCAACCACCAGCAACAGGGCTTCCGGCAGGGTGCGGCTCTCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080932.8
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206728.2
ENSMUST00000206744.2
CDS-3UTR CAA 90 bp GGAGAGCCGCACCCTGCCGGAAGCCCTGTTGCTGGTGGTTGGAACCCTGGTCTTCTGGCTTCCTGGTACTaGCGCCTGGCCTGGGTGCTA +
Preference number: 5 (lower is better)
Translates to: GEPHPAGSPVAGGWNPGLLASWY*RLAWVL
Trigger: TAGCACCCAGGCCAGGCGCAAGTACCAGGAAGCCAG...AAGACCAGGGTTCCAACCACCAGCAACAGGGCTTCCGGCAGGGTGCGGCTCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080932.8
ENSMUST00000205617.2
ENSMUST00000206728.2
ENSMUST00000206744.2
CDS-3UTR CAA 90 bp TGGAGAGCCGCACCCTGCCGGAAGCCCTGTTGCTGGTGGTTGGAACCCTGGTCTCTGGCTTCCTGGTACTaGCGCCTGGCCTGGGTGCTA +
Preference number: 5 (lower is better)
Translates to: WRAAPCRKPCCWWLEPWSLASWY*RLAWVL
Trigger: TAGCACCCAGGCCAGGCGCAAGTACCAGGAAGCCAG...AGACCAGGGTTCCAACCACCAGCAACAGGGCTTCCGGCAGGGTGCGGCTCTCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080932.8
ENSMUST00000205617.2
ENSMUST00000206728.2
ENSMUST00000206744.2
CDS GCA 90 bp GCCATCCACTTCCTCATGCCCTCCAATAAGCGCAGCTCAGCTTCCTaGATCTGCTGCACTGCCCCGTGGCCCTGGGGGCTGCACAGCTCT +
Preference number: 5 (lower is better)
Translates to: AIHFLMPSNKRSSAS*ICCTAPWPWGLHSS
Trigger: AGAGCTGTGCAGCCCCCAGGGCCACGGGGCAGTGCAGCAGATGCAGGAAGCTGAGCTGCGCTTATTGGAGGGCATGAGGAAGTGGATGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000080932.8
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206698.2
ENSMUST00000206728.2
ENSMUST00000206744.2
CDS-3UTR CAA 90 bp AGACCCTCTAGGACTCTGGAGGTGGAACCCGAGGTGGGACGGGGTGAGGGGCCTTATTCCCGGTCACTCTaGACCCTCTGGGCCATCCAC +
Preference number: 5 (lower is better)
Translates to: RPSRTLEVEPEVGRGEGPYSRSL*TLWAIH
Trigger: GTGGATGGCCCAGAGGGTCAAGAGTGACCGGGAATA...AGGCCCCTCACCCCGTCCCACCTCGGGTTCCACCTCCAGAGTCCTAGAGGGTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000205617.2
ENSMUST00000206479.2
CDS-3UTR CAA 90 bp TGGAGAGCCGCACCCTGCCGGAAGCCCTGTTGCTGGTGGTTGGAACCCTGGTCTCGGCTCAGCACCTCTTaGGTGGCCACAGCCAGTTCA +
Preference number: 5 (lower is better)
Translates to: WRAAPCRKPCCWWLEPWSRLSTS*VATASS
Trigger: TGAACTGGCTGTGGCCACCAAAGAGGTGCTGAGCCG...AGACCAGGGTTCCAACCACCAGCAACAGGGCTTCCGGCAGGGTGCGGCTCTCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000080932.8
ENSMUST00000206728.2
CDS-3UTR CAA 90 bp GAGCCGCACCCTGCCGGAAGCCCTGTTGCTGGTGGTTGGAACCCTGGTCTTGGAAGAACCCACTTGTCCTaGGGCACCGCCCTGAACAGG +
Preference number: 5 (lower is better)
Translates to: EPHPAGSPVAGGWNPGLGRTHLS*GTALNR
Trigger: CCTGTTCAGGGCGGTGCCCAAGGACAAGTGGGTTCT...TCCAAGACCAGGGTTCCAACCACCAGCAACAGGGCTTCCGGCAGGGTGCGGCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000080932.8
ENSMUST00000206728.2
CDS-3UTR CAA 90 bp GAGCTGTCCAGCAGTGAGTGGGAACTGCTGAGGAGGTACACGCTCGCCTCCGGGTGCTTCAGAACCCACTaGTCCTTGGGCACCGCCCTG +
Preference number: 5 (lower is better)
Translates to: ELSSSEWELLRRYTLASGCFRTH*SLGTAL
Trigger: CAGGGCGGTGCCCAAGGACAAGTGGGTTCTGAAGCA...CCCGGAGGCGAGCGTGTACCTCCTCAGCAGTTCCCACTCACTGCTGGACAGCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000080932.8
ENSMUST00000206728.2
CDS TCA 90 bp CCACCTGGCCAAGGGCTCCCTGCCCACACCCACACGTGGGTAGCGTaGCAGAGGAGTACACACGTGTGTTGCACGCTCTCCAAGGTCAAC +
Preference number: 5 (lower is better)
Translates to: PPGQGLPAHTHTWVA*QRSTHVCCTLSKVN
Trigger: GTTGACCTTGGAGAGCGTGCAACACACGTGTGTACTCCTCTGTCACGCTACCCACGTGTGGGTGTGGGCAGGGAGCCCTTGGCCAGGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000205617.2
CDS GCA 90 bp CACTTCCTCATGCCCTCCAATAAGCGCAGCTCAGCTTCCTGCATCTaGTGCACTGCCCCGTGGCCCTGGGGGCTGCACAGCTCTGAAGAG +
Preference number: 5 (lower is better)
Translates to: HFLMPSNKRSSASCI*CTAPWPWGLHSSEE
Trigger: CTCTTCAGAGCTGTGCAGCCCCCAGGGCCACGGGGCAGTGCAGCAGATGCAGGAAGCTGAGCTGCGCTTATTGGAGGGCATGAGGAAGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000080932.8
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206698.2
ENSMUST00000206728.2
ENSMUST00000206744.2
CDS-3UTR CAA 90 bp GGCAGGAAGAAGGATGGAGAGCCGCACCCTGCCGGAAGCCCTGTTGCTGGTGGTTATTCCCGGTCACTCTaGACCCTCTGGGCCATCCAC +
Preference number: 5 (lower is better)
Translates to: GRKKDGEPHPAGSPVAGGYSRSL*TLWAIH
Trigger: GTGGATGGCCCAGAGGGTCAAGAGTGACCGGGAATA...ACCACCAGCAACAGGGCTTCCGGCAGGGTGCGGCTCTCCATCCTTCTTCCTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080932.8
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206728.2
ENSMUST00000206744.2
CDS-3UTR CAA 90 bp GGCTCTCCCGAACCAGGAAGTCCCCGGAGTGTGTTAGCAGCTCAGCTACCTCTGTCCTGGCTGTGGGTCTaGGTGAGCTCCTGCTGCAGC +
Preference number: 5 (lower is better)
Translates to: GSPEPGSPRSVLAAQLPLSWLWV*VSSCCS
Trigger: GCTGCAGCAGGAGCTCACCAAGACCCACAGCCAGGA...CAGAGGTAGCTGAGCTGCTAACACACTCCGGGGACTTCCTGGTTCGGGAGAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206744.2
CDS-3UTR CAA 90 bp AGGGATAGCCCCGTGGTACCACAGCTGCTCATAGAGAGGCTTCTGCACCTCCGGTCCTGGCTGTGGGTCTaGGTGAGCTCCTGCTGCAGC +
Preference number: 5 (lower is better)
Translates to: RDSPVVPQLLIERLLHLRSWLWV*VSSCCS
Trigger: GCTGCAGCAGGAGCTCACCAAGACCCACAGCCAGGA...CCGGAGGTGCAGAAGCCTCTCTATGAGCAGCTGTGGTACCACGGGGCTATCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206744.2
CDS-3UTR CAA 90 bp CCCTGCCGGAAGCCCTGTTGCTGGTGGTTGGAACCCTGGTCTTGGAGCTGTCCACGGCTCAGCACCTCTTaGGTGGCCACAGCCAGTTCA +
Preference number: 5 (lower is better)
Translates to: PCRKPCCWWLEPWSWSCPRLSTS*VATASS
Trigger: TGAACTGGCTGTGGCCACCAAAGAGGTGCTGAGCCG...TGGACAGCTCCAAGACCAGGGTTCCAACCACCAGCAACAGGGCTTCCGGCAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000080932.8
ENSMUST00000206728.2
CDS-3UTR CAA 90 bp CCGCACCCTGCCGGAAGCCCTGTTGCTGGTGGTTGGAACCCTGGTCTTGGAGCTTGCAGCATCTGCCTCTaGCTCAGAAGCTGCACCCGT +
Preference number: 5 (lower is better)
Translates to: PHPAGSPVAGGWNPGLGACSICL*LRSCTR
Trigger: ACGGGTGCAGCTTCTGAGCAAGAGGCAGATGCTGCA...AGCTCCAAGACCAGGGTTCCAACCACCAGCAACAGGGCTTCCGGCAGGGTGCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000080932.8
ENSMUST00000206728.2
CDS-3UTR CAA 90 bp GGATGGAGAGCCGCACCCTGCCGGAAGCCCTGTTGCTGGTGGTTGGAACCCTGGCTTCTTTGTAAGGGGTaGCTGGGAGGACAGCAGGTG +
Preference number: 5 (lower is better)
Translates to: GWRAAPCRKPCCWWLEPWLLCKG*LGGQQV
Trigger: CACCTGCTGTCCTCCCAGCAACCCCTTACAAAGAAG...CCAGGGTTCCAACCACCAGCAACAGGGCTTCCGGCAGGGTGCGGCTCTCCATCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000080932.8
ENSMUST00000206728.2
CDS-3UTR CAA 90 bp GCCGCACCCTGCCGGAAGCCCTGTTGCTGGTGGTTGGAACCCTGGTCTTGGAGCGCTTCTTGCAGAAACTaGGCCTTGAGGTCAGGTGGG +
Preference number: 5 (lower is better)
Translates to: AAPCRKPCCWWLEPWSWSASCRN*ALRSGG
Trigger: CCCACCTGACCTCAAGGCCAAGTTTCTGCAAGAAGC...GCTCCAAGACCAGGGTTCCAACCACCAGCAACAGGGCTTCCGGCAGGGTGCGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000080932.8
ENSMUST00000206728.2
CDS GCA 90 bp TTCCTCATGCCCTCCAATAAGCGCAGCTCAGCTTCCTGCATCTGCTaGACTGCCCCGTGGCCCTGGGGGCTGCACAGCTCTGAAGAGAAG +
Preference number: 5 (lower is better)
Translates to: FLMPSNKRSSASCIC*TAPWPWGLHSSEEK
Trigger: CTTCTCTTCAGAGCTGTGCAGCCCCCAGGGCCACGGGGCAGTGCAGCAGATGCAGGAAGCTGAGCTGCGCTTATTGGAGGGCATGAGGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000080932.8
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206698.2
ENSMUST00000206728.2
ENSMUST00000206744.2
CDS-3UTR CAA 90 bp GCAGGAAGAAGGATGGAGAGCCGCACCCTGCCGGAAGCCCTGTTGCTGGTGGTTTATTCCCGGTCACTCTaGACCCTCTGGGCCATCCAC +
Preference number: 5 (lower is better)
Translates to: AGRRMESRTLPEALLLVVYSRSL*TLWAIH
Trigger: GTGGATGGCCCAGAGGGTCAAGAGTGACCGGGAATA...AACCACCAGCAACAGGGCTTCCGGCAGGGTGCGGCTCTCCATCCTTCTTCCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080932.8
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206728.2
ENSMUST00000206744.2
CDS-3UTR CAA 90 bp GTGGTTGGAACCCTGGTCTTGGAGCTGTCCAGCAGTGAGTGGGAACTGCTGAGGCTGGCTTCCTGGTACTaGCGCCTGGCCTGGGTGCTA +
Preference number: 5 (lower is better)
Translates to: VVGTLVLELSSSEWELLRLASWY*RLAWVL
Trigger: TAGCACCCAGGCCAGGCGCAAGTACCAGGAAGCCAG...CCTCAGCAGTTCCCACTCACTGCTGGACAGCTCCAAGACCAGGGTTCCAACCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080932.8
ENSMUST00000205617.2
ENSMUST00000206728.2
ENSMUST00000206744.2
CDS-3UTR CAA 90 bp CGCACCCTGCCGGAAGCCCTGTTGCTGGTGGTTGGAACCCTGGTCTTGGAGCTGGCCTTGTCTCGATCCTaGTCTTTGCTGGCTTCCTGG +
Preference number: 5 (lower is better)
Translates to: RTLPEALLLVVGTLVLELALSRS*SLLASW
Trigger: CCAGGAAGCCAGCAAAGACAAGGATCGAGACAAGGC...CAGCTCCAAGACCAGGGTTCCAACCACCAGCAACAGGGCTTCCGGCAGGGTGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000080932.8
ENSMUST00000205617.2
ENSMUST00000206728.2
CDS-3UTR CAA 90 bp GGAGAGCCGCACCCTGCCGGAAGCCCTGTTGCTGGTGGTTGGAACCCTGGTCTTGCCTTGTCTCGATCCTaGTCTTTGCTGGCTTCCTGG +
Preference number: 5 (lower is better)
Translates to: GEPHPAGSPVAGGWNPGLALSRS*SLLASW
Trigger: CCAGGAAGCCAGCAAAGACAAGGATCGAGACAAGGC...AAGACCAGGGTTCCAACCACCAGCAACAGGGCTTCCGGCAGGGTGCGGCTCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000080932.8
ENSMUST00000205617.2
ENSMUST00000206728.2
CDS-3UTR CAA 90 bp AGAAGGATGGAGAGCCGCACCCTGCCGGAAGCCCTGTTGCTGGTGGTTGGAACCTGCAGCATCTGCCTCTaGCTCAGAAGCTGCACCCGT +
Preference number: 5 (lower is better)
Translates to: RRMESRTLPEALLLVVGTCSICL*LRSCTR
Trigger: ACGGGTGCAGCTTCTGAGCAAGAGGCAGATGCTGCA...GGTTCCAACCACCAGCAACAGGGCTTCCGGCAGGGTGCGGCTCTCCATCCTTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000080932.8
ENSMUST00000206728.2
CDS-3UTR CAA 90 bp CCCTGCCGGAAGCCCTGTTGCTGGTGGTTGGAACCCTGGTCTTGGAGCTGTCCAGGAGGGATAGAGAACTaGGGGCGGAAGATTCCGGAG +
Preference number: 5 (lower is better)
Translates to: PCRKPCCWWLEPWSWSCPGGIEN*GRKIPE
Trigger: CTCCGGAATCTTCCGCCCCAAGTTCTCTATCCCTCC...TGGACAGCTCCAAGACCAGGGTTCCAACCACCAGCAACAGGGCTTCCGGCAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000080932.8
ENSMUST00000206728.2
CDS-3UTR CAA 90 bp CACCCTGCCGGAAGCCCTGTTGCTGGTGGTTGGAACCCTGGTCTTGGAGCTGTCGGAGGGATAGAGAACTaGGGGCGGAAGATTCCGGAG +
Preference number: 5 (lower is better)
Translates to: HPAGSPVAGGWNPGLGAVGGIEN*GRKIPE
Trigger: CTCCGGAATCTTCCGCCCCAAGTTCTCTATCCCTCC...GACAGCTCCAAGACCAGGGTTCCAACCACCAGCAACAGGGCTTCCGGCAGGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000080932.8
ENSMUST00000206728.2
CDS-3UTR CAA 90 bp TGGAGAGCCGCACCCTGCCGGAAGCCCTGTTGCTGGTGGTTGGAACCCTGGTCTCTTCTTTGTAAGGGGTaGCTGGGAGGACAGCAGGTG +
Preference number: 5 (lower is better)
Translates to: WRAAPCRKPCCWWLEPWSLLCKG*LGGQQV
Trigger: CACCTGCTGTCCTCCCAGCAACCCCTTACAAAGAAG...AGACCAGGGTTCCAACCACCAGCAACAGGGCTTCCGGCAGGGTGCGGCTCTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000080932.8
ENSMUST00000206728.2
CDS-3UTR CAA 90 bp AGAGGAATTTGGGCAGGAAGAAGGATGGAGAGCCGCACCCTGCCGGAAGCCCTGAGAACCCACTTGTCCTaGGGCACCGCCCTGAACAGG +
Preference number: 5 (lower is better)
Translates to: RGIWAGRRMESRTLPEALRTHLS*GTALNR
Trigger: CCTGTTCAGGGCGGTGCCCAAGGACAAGTGGGTTCT...CAGGGCTTCCGGCAGGGTGCGGCTCTCCATCCTTCTTCCTGCCCAAATTCCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000080932.8
ENSMUST00000206728.2
CDS-3UTR CAA 90 bp AGAGAGGAATTTGGGCAGGAAGAAGGATGGAGAGCCGCACCCTGCCGGAAGCCCTGCTTCAGAACCCACTaGTCCTTGGGCACCGCCCTG +
Preference number: 5 (lower is better)
Translates to: REEFGQEEGWRAAPCRKPCFRTH*SLGTAL
Trigger: CAGGGCGGTGCCCAAGGACAAGTGGGTTCTGAAGCA...GGGCTTCCGGCAGGGTGCGGCTCTCCATCCTTCTTCCTGCCCAAATTCCTCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000080932.8
ENSMUST00000206728.2
CDS-3UTR CAA 90 bp AGAGAGGAATTTGGGCAGGAAGAAGGATGGAGAGCCGCACCCTGCCGGAAGCCCTATTCCCGGTCACTCTaGACCCTCTGGGCCATCCAC +
Preference number: 5 (lower is better)
Translates to: REEFGQEEGWRAAPCRKPYSRSL*TLWAIH
Trigger: GTGGATGGCCCAGAGGGTCAAGAGTGACCGGGAATA...GGGCTTCCGGCAGGGTGCGGCTCTCCATCCTTCTTCCTGCCCAAATTCCTCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080932.8
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206728.2
ENSMUST00000206744.2
CDS-3UTR CAA 90 bp CCTAAGAGAGGAATTTGGGCAGGAAGAAGGATGGAGAGCCGCACCCTGCCGGAATCCTGGCTGTGGGTCTaGGTGAGCTCCTGCTGCAGC +
Preference number: 5 (lower is better)
Translates to: PKRGIWAGRRMESRTLPESWLWV*VSSCCS
Trigger: GCTGCAGCAGGAGCTCACCAAGACCCACAGCCAGGA...TTCCGGCAGGGTGCGGCTCTCCATCCTTCTTCCTGCCCAAATTCCTCTCTTAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000080932.8
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206728.2
ENSMUST00000206744.2
CDS-3UTR CAA 90 bp GATGGAGAGCCGCACCCTGCCGGAAGCCCTGTTGCTGGTGGTTGGAACCCTGGTCCCTTGTATTGCCTCTaGCAGCATCTGCCTCTTGCT +
Preference number: 5 (lower is better)
Translates to: DGEPHPAGSPVAGGWNPGPLYCL*QHLPLA
Trigger: AGCAAGAGGCAGATGCTGCAAGAGGCAATACAAGGG...ACCAGGGTTCCAACCACCAGCAACAGGGCTTCCGGCAGGGTGCGGCTCTCCATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000080932.8
ENSMUST00000206728.2
CDS-3UTR CAA 90 bp GCAGGAAGAAGGATGGAGAGCCGCACCCTGCCGGAAGCCCTGTTGCTGGTGGTTTGCAGAAACTTGGCCTaGAGGTCAGGTGGGAGTGTC +
Preference number: 5 (lower is better)
Translates to: AGRRMESRTLPEALLLVVCRNLA*RSGGSV
Trigger: GACACTCCCACCTGACCTCAAGGCCAAGTTTCTGCA...AACCACCAGCAACAGGGCTTCCGGCAGGGTGCGGCTCTCCATCCTTCTTCCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000080932.8
ENSMUST00000206728.2
CDS-3UTR CAA 90 bp GGATGGAGAGCCGCACCCTGCCGGAAGCCCTGTTGCTGGTGGTTGGAACCCTGGCAGGATCCTTGCTTCTaGCAGAAACTTGGCCTTGAG +
Preference number: 5 (lower is better)
Translates to: GWRAAPCRKPCCWWLEPWQDPCF*QKLGLE
Trigger: CTCAAGGCCAAGTTTCTGCAAGAAGCAAGGATCCTG...CCAGGGTTCCAACCACCAGCAACAGGGCTTCCGGCAGGGTGCGGCTCTCCATCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000080932.8
ENSMUST00000206728.2
CDS GCA 90 bp GATCAGCACGCTCAGTTTGCTCAAGGGCCCCGAGTTCAGATCTTCTaGATGCTGCCGCAGCACCCGGCTCAAGTTCTCGGTCTGGCTTGT +
Preference number: 5 (lower is better)
Translates to: DQHAQFAQGPRVQIF*MLPQHPAQVLGLAC
Trigger: ACAAGCCAGACCGAGAACTTGAGCCGGGTGCTGCGGCAGCATGCAGAAGATCTGAACTCGGGGCCCTTGAGCAAACTGAGCGTGCTGATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080932.8
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206728.2
ENSMUST00000206744.2
CDS-3UTR CAA 90 bp TGGGCAGGAAGAAGGATGGAGAGCCGCACCCTGCCGGAAGCCCTGTTGCTGGTGCGGACATACTTGTCTTaGGCCTTGTCTCGATCCTTG +
Preference number: 5 (lower is better)
Translates to: WAGRRMESRTLPEALLLVRTYLS*ALSRSL
Trigger: CAAGGATCGAGACAAGGCCAAAGACAAGTATGTCCG...CACCAGCAACAGGGCTTCCGGCAGGGTGCGGCTCTCCATCCTTCTTCCTGCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080932.8
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206728.2
CDS-3UTR CAA 90 bp AGAGAGGAATTTGGGCAGGAAGAAGGATGGAGAGCCGCACCCTGCCGGAAGCCCGCTTCTTGCAGAAACTaGGCCTTGAGGTCAGGTGGG +
Preference number: 5 (lower is better)
Translates to: REEFGQEEGWRAAPCRKPASCRN*ALRSGG
Trigger: CCCACCTGACCTCAAGGCCAAGTTTCTGCAAGAAGC...GGGCTTCCGGCAGGGTGCGGCTCTCCATCCTTCTTCCTGCCCAAATTCCTCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000080932.8
ENSMUST00000206728.2
CDS TCA 90 bp TACTTGCGCCTGGCCTGGGTGCTATCTCGTACCAGGGTCCGGTACTaGGTCTTCAGCTTCTCAATGTCCTGGCTGTGGGTCTTGGTGAGC +
Preference number: 5 (lower is better)
Translates to: YLRLAWVLSRTRVRY*VFSFSMSWLWVLVS
Trigger: GCTCACCAAGACCCACAGCCAGGACATTGAGAAGCTGAAGACTCAGTACCGGACCCTGGTACGAGATAGCACCCAGGCCAGGCGCAAGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080932.8
ENSMUST00000205617.2
ENSMUST00000206728.2
ENSMUST00000206744.2
CDS GCA 90 bp AGCACGCTCAGTTTGCTCAAGGGCCCCGAGTTCAGATCTTCTGCATaGTGCCGCAGCACCCGGCTCAAGTTCTCGGTCTGGCTTGTTATC +
Preference number: 5 (lower is better)
Translates to: STLSLLKGPEFRSSA*CRSTRLKFSVWLVI
Trigger: GATAACAAGCCAGACCGAGAACTTGAGCCGGGTGCTGCGGCAGCATGCAGAAGATCTGAACTCGGGGCCCTTGAGCAAACTGAGCGTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080932.8
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206728.2
ENSMUST00000206744.2
CDS GCA 90 bp CTTTGGCCTTGTCTCGATCCTTGTCTTTGCTGGCTTCCTGGTACTTaGGCCTGGCCTGGGTGCTATCTCGTACCAGGGTCCGGTACTGAG +
Preference number: 5 (lower is better)
Translates to: LWPCLDPCLCWLPGT*AWPGCYLVPGSGTE
Trigger: CTCAGTACCGGACCCTGGTACGAGATAGCACCCAGGCCAGGCGCAAGTACCAGGAAGCCAGCAAAGACAAGGATCGAGACAAGGCCAAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000080932.8
ENSMUST00000205617.2
ENSMUST00000206728.2
CDS CCA 90 bp CCAGGAAGAAGAGCGAACCTTTGCTGGCTTCCTGGTACTTGCGCCTaGCCTGGGTGCTATCTCGTACCAGGGTCCGGTACTGAGTCTTCA +
Preference number: 5 (lower is better)
Translates to: PGRRANLCWLPGTCA*PGCYLVPGSGTESS
Trigger: TGAAGACTCAGTACCGGACCCTGGTACGAGATAGCACCCAGGCCAGGCGCAAGTACCAGGAAGCCAGCAAAGGTTCGCTCTTCTTCCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206744.2
CDS-3UTR CAA 90 bp TGGACGAAGCTGGTGAGGAAAGTCACAGGTAGAGCCCAGAAGGCTGGCGAGTCCGCCTTGTCTCGATCCTaGTCTTTGCTGGCTTCCTGG +
Preference number: 5 (lower is better)
Translates to: WTKLVRKVTGRAQKAGESALSRS*SLLASW
Trigger: CCAGGAAGCCAGCAAAGACAAGGATCGAGACAAGGC...GGACTCGCCAGCCTTCTGGGCTCTACCTGTGACTTTCCTCACCAGCTTCGTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000205617.2
CDS-3UTR CAA 90 bp GTTGGAACCCTGGTCTTGGAGCTGTCCAGCAGTGAGTGGGAACTGCTGAGGAGGGTTCTGTTCCTCACTTaGGAGCTCACGCTGCAGCTG +
Preference number: 5 (lower is better)
Translates to: VGTLVLELSSSEWELLRRVLFLT*ELTLQL
Trigger: CAGCTGCAGCGTGAGCTCCAAAGTGAGGAACAGAAC...CCTCCTCAGCAGTTCCCACTCACTGCTGGACAGCTCCAAGACCAGGGTTCCAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000080932.8
ENSMUST00000206728.2
CDS-3UTR CAA 90 bp TGGGCAGGAAGAAGGATGGAGAGCCGCACCCTGCCGGAAGCCCTGTTGCTGGTGATGAGACGCACAATGTaGGGGTGGTTGTACTGTTTC +
Preference number: 5 (lower is better)
Translates to: WAGRRMESRTLPEALLLVMRRTM*GWLYCF
Trigger: GAAACAGTACAACCACCCCAACATTGTGCGTCTCAT...CACCAGCAACAGGGCTTCCGGCAGGGTGCGGCTCTCCATCCTTCTTCCTGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000080932.8
ENSMUST00000206728.2
CDS-3UTR CAA 90 bp GGCAGGAAGAAGGATGGAGAGCCGCACCCTGCCGGAAGCCCTGTTGCTGGTGGTATGAGACGCACAATGTaGGGGTGGTTGTACTGTTTC +
Preference number: 5 (lower is better)
Translates to: GRKKDGEPHPAGSPVAGGMRRTM*GWLYCF
Trigger: GAAACAGTACAACCACCCCAACATTGTGCGTCTCAT...ACCACCAGCAACAGGGCTTCCGGCAGGGTGCGGCTCTCCATCCTTCTTCCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000080932.8
ENSMUST00000206728.2
CDS GCA 90 bp ACGCTCAGTTTGCTCAAGGGCCCCGAGTTCAGATCTTCTGCATGCTaGCGCAGCACCCGGCTCAAGTTCTCGGTCTGGCTTGTTATCTCT +
Preference number: 5 (lower is better)
Translates to: TLSLLKGPEFRSSAC*RSTRLKFSVWLVIS
Trigger: AGAGATAACAAGCCAGACCGAGAACTTGAGCCGGGTGCTGCGGCAGCATGCAGAAGATCTGAACTCGGGGCCCTTGAGCAAACTGAGCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000080932.8
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206728.2
ENSMUST00000206744.2
CDS GCA 90 bp AGAGCGAACCTTTGCTGGCTTCCTGGTACTTGCGCCTGGCCTGGGTaGTATCTCGTACCAGGGTCCGGTACTGAGTCTTCAGCTTCTCAA +
Preference number: 5 (lower is better)
Translates to: RANLCWLPGTCAWPG*YLVPGSGTESSASQ
Trigger: TTGAGAAGCTGAAGACTCAGTACCGGACCCTGGTACGAGATAGCACCCAGGCCAGGCGCAAGTACCAGGAAGCCAGCAAAGGTTCGCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206744.2
CDS CCA 90 bp CCTTGTCTCGATCCTTGTCTTTGCTGGCTTCCTGGTACTTGCGCCTaGCCTGGGTGCTATCTCGTACCAGGGTCCGGTACTGAGTCTTCA +
Preference number: 5 (lower is better)
Translates to: PCLDPCLCWLPGTCA*PGCYLVPGSGTESS
Trigger: TGAAGACTCAGTACCGGACCCTGGTACGAGATAGCACCCAGGCCAGGCGCAAGTACCAGGAAGCCAGCAAAGACAAGGATCGAGACAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000080932.8
ENSMUST00000205617.2
ENSMUST00000206728.2
CDS CCA 90 bp CTAGACTGGGTTTTCTCCCTGCCAGGAAGAAGAGCGAACCTTTGCTaGCTTCCTGGTACTTGCGCCTGGCCTGGGTGCTATCTCGTACCA +
Preference number: 5 (lower is better)
Translates to: LDWVFSLPGRRANLC*LPGTCAWPGCYLVP
Trigger: TGGTACGAGATAGCACCCAGGCCAGGCGCAAGTACCAGGAAGCCAGCAAAGGTTCGCTCTTCTTCCTGGCAGGGAGAAAACCCAGTCTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000206744.2
CDS-3UTR CAA 90 bp CTAAGAGAGGAATTTGGGCAGGAAGAAGGATGGAGAGCCGCACCCTGCCGGAAGGTTCTGTTCCTCACTTaGGAGCTCACGCTGCAGCTG +
Preference number: 5 (lower is better)
Translates to: LREEFGQEEGWRAAPCRKVLFLT*ELTLQL
Trigger: CAGCTGCAGCGTGAGCTCCAAAGTGAGGAACAGAAC...CTTCCGGCAGGGTGCGGCTCTCCATCCTTCTTCCTGCCCAAATTCCTCTCTTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000080932.8
ENSMUST00000206728.2
CDS-3UTR CAA 90 bp GGAGAGCCGCACCCTGCCGGAAGCCCTGTTGCTGGTGGTTGGAACCCTGGTCTTACTGTTTCAGGATCCTaGCTTCTTGCAGAAACTTGG +
Preference number: 5 (lower is better)
Translates to: GEPHPAGSPVAGGWNPGLTVSGS*LLAETW
Trigger: CCAAGTTTCTGCAAGAAGCAAGGATCCTGAAACAGT...AAGACCAGGGTTCCAACCACCAGCAACAGGGCTTCCGGCAGGGTGCGGCTCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000080932.8
ENSMUST00000206728.2
CDS-3UTR CAA 90 bp GAAGGATGGAGAGCCGCACCCTGCCGGAAGCCCTGTTGCTGGTGGTTGGAACCCACTGTTTCAGGATCCTaGCTTCTTGCAGAAACTTGG +
Preference number: 5 (lower is better)
Translates to: EGWRAAPCRKPCCWWLEPTVSGS*LLAETW
Trigger: CCAAGTTTCTGCAAGAAGCAAGGATCCTGAAACAGT...GGGTTCCAACCACCAGCAACAGGGCTTCCGGCAGGGTGCGGCTCTCCATCCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000080932.8
ENSMUST00000206728.2
CDS GCA 90 bp GATCCTTGTCTTTGCTGGCTTCCTGGTACTTGCGCCTGGCCTGGGTaGTATCTCGTACCAGGGTCCGGTACTGAGTCTTCAGCTTCTCAA +
Preference number: 5 (lower is better)
Translates to: DPCLCWLPGTCAWPG*YLVPGSGTESSASQ
Trigger: TTGAGAAGCTGAAGACTCAGTACCGGACCCTGGTACGAGATAGCACCCAGGCCAGGCGCAAGTACCAGGAAGCCAGCAAAGACAAGGATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000080932.8
ENSMUST00000205617.2
ENSMUST00000206728.2
CDS GCA 90 bp CTACTAGACTGGGTTTTCTCCCTGCCAGGAAGAAGAGCGAACCTTTaGTGGCTTCCTGGTACTTGCGCCTGGCCTGGGTGCTATCTCGTA +
Preference number: 5 (lower is better)
Translates to: LLDWVFSLPGRRANL*WLPGTCAWPGCYLV
Trigger: TACGAGATAGCACCCAGGCCAGGCGCAAGTACCAGGAAGCCAGCAAAGGTTCGCTCTTCTTCCTGGCAGGGAGAAAACCCAGTCTAGTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000206744.2
CDS-3UTR CAA 90 bp GTTGGAACCCTGGTCTTGGAGCTGTCCAGCAGTGAGTGGGAACTGCTGAGGAGGCAGGATCCTTGCTTCTaGCAGAAACTTGGCCTTGAG +
Preference number: 5 (lower is better)
Translates to: VGTLVLELSSSEWELLRRQDPCF*QKLGLE
Trigger: CTCAAGGCCAAGTTTCTGCAAGAAGCAAGGATCCTG...CCTCCTCAGCAGTTCCCACTCACTGCTGGACAGCTCCAAGACCAGGGTTCCAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000080932.8
ENSMUST00000206728.2
CDS-3UTR CAA 90 bp AGAAGGATGGAGAGCCGCACCCTGCCGGAAGCCCTGTTGCTGGTGGTTGGAACCACAATGTTGGGGTGGTaGTACTGTTTCAGGATCCTT +
Preference number: 5 (lower is better)
Translates to: RRMESRTLPEALLLVVGTTMLGW*YCFRIL
Trigger: AAGGATCCTGAAACAGTACAACCACCCCAACATTGT...GGTTCCAACCACCAGCAACAGGGCTTCCGGCAGGGTGCGGCTCTCCATCCTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000080932.8
ENSMUST00000206728.2
CDS-3UTR CAA 90 bp GCACCCTGCCGGAAGCCCTGTTGCTGGTGGTTGGAACCCTGGTCTTGGAGCTGTACAATGTTGGGGTGGTaGTACTGTTTCAGGATCCTT +
Preference number: 5 (lower is better)
Translates to: APCRKPCCWWLEPWSWSCTMLGW*YCFRIL
Trigger: AAGGATCCTGAAACAGTACAACCACCCCAACATTGT...ACAGCTCCAAGACCAGGGTTCCAACCACCAGCAACAGGGCTTCCGGCAGGGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000080932.8
ENSMUST00000206728.2
CDS-3UTR CAA 90 bp ATGGAGAGCCGCACCCTGCCGGAAGCCCTGTTGCTGGTGGTTGGAACCCTGGTCCTGTGGATACAACACTaGCTTTCCAAGTATTCCATG +
Preference number: 5 (lower is better)
Translates to: MESRTLPEALLLVVGTLVLWIQH*LSKYSM
Trigger: CATGGAATACTTGGAAAGCAAGTGTTGTATCCACAG...GACCAGGGTTCCAACCACCAGCAACAGGGCTTCCGGCAGGGTGCGGCTCTCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000080932.8
ENSMUST00000206728.2
CDS TCA 90 bp GCAAGGACATGTGGTGAAGCAATCCTGCATATTCCCGGTCACTCTTaGCCCTCTGGGCCATCCACTTCCTCATGCCCTCCAATAAGCGCA +
Preference number: 5 (lower is better)
Translates to: ARTCGEAILHIPGHS*PSGPSTSSCPPISA
Trigger: TGCGCTTATTGGAGGGCATGAGGAAGTGGATGGCCCAGAGGGTCAAGAGTGACCGGGAATATGCAGGATTGCTTCACCACATGTCCTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000080932.8
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206698.2
ENSMUST00000206728.2
ENSMUST00000206744.2
CDS CCA 90 bp TGTGGTGGGCAAAGAGCTTCCACAGGCTCCGGACATACTTGTCTTTaGCCTTGTCTCGATCCTTGTCAGGGTCCGGTACTGAGTCTTCAG +
Preference number: 5 (lower is better)
Translates to: CGGQRASTGSGHTCL*PCLDPCQGPVLSLQ
Trigger: CTGAAGACTCAGTACCGGACCCTGACAAGGATCGAGACAAGGCCAAAGACAAGTATGTCCGGAGCCTGTGGAAGCTCTTTGCCCACCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206479.2
CDS-3UTR CAA 90 bp GTGCTTCAGAACCCACTTGTCCTTGGGCACCGCCCTGAACAGGACAACACCACTCGGACATACTTGTCTTaGGCCTTGTCTCGATCCTTG +
Preference number: 5 (lower is better)
Translates to: VLQNPLVLGHRPEQDNTTRTYLS*ALSRSL
Trigger: CAAGGATCGAGACAAGGCCAAAGACAAGTATGTCCG...AGTGGTGTTGTCCTGTTCAGGGCGGTGCCCAAGGACAAGTGGGTTCTGAAGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000205617.2
ENSMUST00000206479.2
CDS-3UTR CAA 90 bp TTCTGCCTAAGAGAGGAATTTGGGCAGGAAGAAGGATGGAGAGCCGCACCCTGCCCCTTGTATTGCCTCTaGCAGCATCTGCCTCTTGCT +
Preference number: 5 (lower is better)
Translates to: FCLREEFGQEEGWRAAPCPLYCL*QHLPLA
Trigger: AGCAAGAGGCAGATGCTGCAAGAGGCAATACAAGGG...GCAGGGTGCGGCTCTCCATCCTTCTTCCTGCCCAAATTCCTCTCTTAGGCAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000080932.8
ENSMUST00000206728.2
CDS-3UTR CAA 90 bp CTGGTCTTGGAGCTGTCCAGCAGTGAGTGGGAACTGCTGAGGAGGTACACGCTCTGCTATCTGCAACCCTaGTATTGCCTCTTGCAGCAT +
Preference number: 5 (lower is better)
Translates to: LVLELSSSEWELLRRYTLCYLQP*YCLLQH
Trigger: ATGCTGCAAGAGGCAATACAAGGGTTGCAGATAGCA...GAGCGTGTACCTCCTCAGCAGTTCCCACTCACTGCTGGACAGCTCCAAGACCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000080932.8
ENSMUST00000206728.2
CDS-3UTR CAA 90 bp CTGGTGGTTGGAACCCTGGTCTTGGAGCTGTCCAGCAGTGAGTGGGAACTGCTGTGCTATCTGCAACCCTaGTATTGCCTCTTGCAGCAT +
Preference number: 5 (lower is better)
Translates to: LVVGTLVLELSSSEWELLCYLQP*YCLLQH
Trigger: ATGCTGCAAGAGGCAATACAAGGGTTGCAGATAGCA...CAGCAGTTCCCACTCACTGCTGGACAGCTCCAAGACCAGGGTTCCAACCACCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000080932.8
ENSMUST00000206728.2
CDS-3UTR CAA 90 bp CACCCTGCCGGAAGCCCTGTTGCTGGTGGTTGGAACCCTGGTCTTGGAGCTGTCCTGTGGATACAACACTaGCTTTCCAAGTATTCCATG +
Preference number: 5 (lower is better)
Translates to: HPAGSPVAGGWNPGLGAVLWIQH*LSKYSM
Trigger: CATGGAATACTTGGAAAGCAAGTGTTGTATCCACAG...GACAGCTCCAAGACCAGGGTTCCAACCACCAGCAACAGGGCTTCCGGCAGGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000080932.8
ENSMUST00000206728.2
CDS CCA 90 bp TGTGGTGGGCAAAGAGCTTCCACAGGCTCCGGACATACTTGTCTTTaGCCTTGTCTCGATCCTTGTCTTTGCTGGCTTCCTGGTACTTGC +
Preference number: 5 (lower is better)
Translates to: CGGQRASTGSGHTCL*PCLDPCLCWLPGTC
Trigger: GCAAGTACCAGGAAGCCAGCAAAGACAAGGATCGAGACAAGGCCAAAGACAAGTATGTCCGGAGCCTGTGGAAGCTCTTTGCCCACCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000080932.8
ENSMUST00000205617.2
ENSMUST00000206728.2
CDS TCA 90 bp ATACTTGTCTTTGGCCTTGTCTCGATCCTTGTCAGGGTCCGGTACTaGGTCTTCAGCTTCTCAATGTCCTGGCTGTGGGTCTTGGTGAGC +
Preference number: 5 (lower is better)
Translates to: ILVFGLVSILVRVRY*VFSFSMSWLWVLVS
Trigger: GCTCACCAAGACCCACAGCCAGGACATTGAGAAGCTGAAGACTCAGTACCGGACCCTGACAAGGATCGAGACAAGGCCAAAGACAAGTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206479.2
CDS-3UTR CAA 90 bp TCCCTGTGGATACAACACTTGCTTTCCAAGTATTCCATGCCAGCAGCTGCGTCCAAGAAGAGCGAACCTTaGCTGGCTTCCTGGTACTTG +
Preference number: 5 (lower is better)
Translates to: SLWIQHLLSKYSMPAAASKKSEP*LASWYL
Trigger: CAAGTACCAGGAAGCCAGCAAAGGTTCGCTCTTCTT...GGACGCAGCTGCTGGCATGGAATACTTGGAAAGCAAGTGTTGTATCCACAGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206744.2
CDS-3UTR CAA 90 bp CTTTTCTTTGGGTTGGGAAAGCATTCTGATTGGAAAGTGGCTGGCATTTTACATCGGACATACTTGTCTTaGGCCTTGTCTCGATCCTTG +
Preference number: 5 (lower is better)
Translates to: LFFGLGKHSDWKVAGILHRTYLS*ALSRSL
Trigger: CAAGGATCGAGACAAGGCCAAAGACAAGTATGTCCG...ATGTAAAATGCCAGCCACTTTCCAATCAGAATGCTTTCCCAACCCAAAGAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000205617.2
ENSMUST00000206479.2
CDS CCA 72 bp CCCCACCACATGCACCCCAACAGAGCCAACCTAGCCTaGCCACCTGGCCAAGGGCTCCCTGCCCACACCCAC +
Preference number: 6 (lower is better)
Translates to: PHHMHPNRANLA*PPGQGLPAHTH
Trigger: GTGGGTGTGGGCAGGGAGCCCTTGGCCAGGTGGCCAGGCTAGGTTGGCTCTGTTGGGGTGCATGTGGTGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000205617.2
CDS GCA 72 bp AGCCAACCTAGCCTGGCCACCTGGCCAAGGGCTCCCTaGCCACACCCACACGTGGGTAGCGTGACAGAGGAG +
Preference number: 6 (lower is better)
Translates to: SQPSLATWPRAP*PHPHVGSVTEE
Trigger: CTCCTCTGTCACGCTACCCACGTGTGGGTGTGGGCAGGGAGCCCTTGGCCAGGTGGCCAGGCTAGGTTGGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000205617.2
CDS TCA 72 bp CAAGGGCTCCCTGCCCACACCCACACGTGGGTAGCGTaGCAGAGGAGTACACACGTGTGTTGCACGCTCTCC +
Preference number: 6 (lower is better)
Translates to: QGLPAHTHTWVA*QRSTHVCCTLS
Trigger: GGAGAGCGTGCAACACACGTGTGTACTCCTCTGTCACGCTACCCACGTGTGGGTGTGGGCAGGGAGCCCTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000205617.2
CDS CCA 72 bp GCATGCTGCCGCAGCACCCGGCTCAAGTTCTCGGTCTaGCTTGTTATCTCTGCCCAGGACTGGCTGACAGGG +
Preference number: 6 (lower is better)
Translates to: ACCRSTRLKFSV*LVISAQDWLTG
Trigger: CCCTGTCAGCCAGTCCTGGGCAGAGATAACAAGCCAGACCGAGAACTTGAGCCGGGTGCTGCGGCAGCATGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000080932.8
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206698.2
ENSMUST00000206728.2
ENSMUST00000206744.2
CDS CAA 90 bp CCACACCCACACGTGGGTAGCGTGACAGAGGAGTACACACGTGTGTaGCACGCTCTCCAAGGTCAACTCGTTCAGCTGCAGCTCCCCTGG +
Preference number: 6 (lower is better)
Translates to: PHPHVGSVTEEYTRV*HALQGQLVQLQLPW
Trigger: CCAGGGGAGCTGCAGCTGAACGAGTTGACCTTGGAGAGCGTGCAACACACGTGTGTACTCCTCTGTCACGCTACCCACGTGTGGGTGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000205617.2
CDS GCA 72 bp TGGGTTTTCTCCCTGCCAGGAAGAAGAGCGAACCTTTaGTGGCTTCCTGGTACTTGCGCCTGGCCTGGGTGC +
Preference number: 6 (lower is better)
Translates to: WVFSLPGRRANL*WLPGTCAWPGC
Trigger: GCACCCAGGCCAGGCGCAAGTACCAGGAAGCCAGCAAAGGTTCGCTCTTCTTCCTGGCAGGGAGAAAACCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000206744.2
CDS CCA 72 bp AGAGCGAACCTTTGCTGGCTTCCTGGTACTTGCGCCTaGCCTGGGTGCTATCTCGTACCAGGGTCCGGTACT +
Preference number: 6 (lower is better)
Translates to: RANLCWLPGTCA*PGCYLVPGSGT
Trigger: AGTACCGGACCCTGGTACGAGATAGCACCCAGGCCAGGCGCAAGTACCAGGAAGCCAGCAAAGGTTCGCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206744.2
CDS CCA 72 bp CCTGCCAGGAAGAAGAGCGAACCTTTGCTGGCTTCCTaGTACTTGCGCCTGGCCTGGGTGCTATCTCGTACC +
Preference number: 6 (lower is better)
Translates to: PARKKSEPLLAS*YLRLAWVLSRT
Trigger: GGTACGAGATAGCACCCAGGCCAGGCGCAAGTACCAGGAAGCCAGCAAAGGTTCGCTCTTCTTCCTGGCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206744.2
CDS CAA 72 bp CTGGGTTTTCTCCCTGCCAGGAAGAAGAGCGAACCTTaGCTGGCTTCCTGGTACTTGCGCCTGGCCTGGGTG +
Preference number: 6 (lower is better)
Translates to: LGFLPARKKSEP*LASWYLRLAWV
Trigger: CACCCAGGCCAGGCGCAAGTACCAGGAAGCCAGCAAAGGTTCGCTCTTCTTCCTGGCAGGGAGAAAACCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000206744.2
CDS GCA 72 bp CTTTGCTGGCTTCCTGGTACTTGCGCCTGGCCTGGGTaGTATCTCGTACCAGGGTCCGGTACTGAGTCTTCA +
Preference number: 6 (lower is better)
Translates to: LCWLPGTCAWPG*YLVPGSGTESS
Trigger: TGAAGACTCAGTACCGGACCCTGGTACGAGATAGCACCCAGGCCAGGCGCAAGTACCAGGAAGCCAGCAAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000080932.8
ENSMUST00000205617.2
ENSMUST00000206728.2
ENSMUST00000206744.2
CDS CCA 72 bp GATCCTTGTCTTTGCTGGCTTCCTGGTACTTGCGCCTaGCCTGGGTGCTATCTCGTACCAGGGTCCGGTACT +
Preference number: 6 (lower is better)
Translates to: DPCLCWLPGTCA*PGCYLVPGSGT
Trigger: AGTACCGGACCCTGGTACGAGATAGCACCCAGGCCAGGCGCAAGTACCAGGAAGCCAGCAAAGACAAGGATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000080932.8
ENSMUST00000205617.2
ENSMUST00000206728.2
CDS CAA 72 bp AGGAAGAAGAGCGAACCTTTGCTGGCTTCCTGGTACTaGCGCCTGGCCTGGGTGCTATCTCGTACCAGGGTC +
Preference number: 6 (lower is better)
Translates to: RKKSEPLLASWY*RLAWVLSRTRV
Trigger: GACCCTGGTACGAGATAGCACCCAGGCCAGGCGCAAGTACCAGGAAGCCAGCAAAGGTTCGCTCTTCTTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206744.2
CDS CCA 72 bp TTGGCCTTGTCTCGATCCTTGTCTTTGCTGGCTTCCTaGTACTTGCGCCTGGCCTGGGTGCTATCTCGTACC +
Preference number: 6 (lower is better)
Translates to: LALSRSLSLLAS*YLRLAWVLSRT
Trigger: GGTACGAGATAGCACCCAGGCCAGGCGCAAGTACCAGGAAGCCAGCAAAGACAAGGATCGAGACAAGGCCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000080932.8
ENSMUST00000205617.2
ENSMUST00000206728.2
CDS CAA 72 bp CACGTGGGTAGCGTGACAGAGGAGTACACACGTGTGTaGCACGCTCTCCAAGGTCAACTCGTTCAGCTGCAG +
Preference number: 6 (lower is better)
Translates to: HVGSVTEEYTRV*HALQGQLVQLQ
Trigger: CTGCAGCTGAACGAGTTGACCTTGGAGAGCGTGCAACACACGTGTGTACTCCTCTGTCACGCTACCCACGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000205617.2
CDS CAA 90 bp TCTACTAGACTGGGTTTTCTCCCTGCCAGGAAGAAGAGCGAACCTTaGCTGGCTTCCTGGTACTTGCGCCTGGCCTGGGTGCTATCTCGT +
Preference number: 6 (lower is better)
Translates to: STRLGFLPARKKSEP*LASWYLRLAWVLSR
Trigger: ACGAGATAGCACCCAGGCCAGGCGCAAGTACCAGGAAGCCAGCAAAGGTTCGCTCTTCTTCCTGGCAGGGAGAAAACCCAGTCTAGTAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000206744.2
CDS TCA 72 bp TGTGGTGAAGCAATCCTGCATATTCCCGGTCACTCTTaGCCCTCTGGGCCATCCACTTCCTCATGCCCTCCA +
Preference number: 6 (lower is better)
Translates to: CGEAILHIPGHS*PSGPSTSSCPP
Trigger: TGGAGGGCATGAGGAAGTGGATGGCCCAGAGGGTCAAGAGTGACCGGGAATATGCAGGATTGCTTCACCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000080932.8
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206698.2
ENSMUST00000206728.2
ENSMUST00000206744.2
CDS GCA 72 bp TCCGCTGTCCTGCAAGGACATGTGGTGAAGCAATCCTaGATATTCCCGGTCACTCTTGACCCTCTGGGCCAT +
Preference number: 6 (lower is better)
Translates to: SAVLQGHVVKQS*IFPVTLDPLGH
Trigger: ATGGCCCAGAGGGTCAAGAGTGACCGGGAATATGCAGGATTGCTTCACCACATGTCCTTGCAGGACAGCGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000080932.8
ENSMUST00000205617.2
ENSMUST00000206479.2
ENSMUST00000206698.2
ENSMUST00000206728.2
ENSMUST00000206744.2
CDS GCA 72 bp CATACTTGTCTTTGGCCTTGTCTCGATCCTTGTCTTTaGTGGCTTCCTGGTACTTGCGCCTGGCCTGGGTGC +
Preference number: 6 (lower is better)
Translates to: HTCLWPCLDPCL*WLPGTCAWPGC
Trigger: GCACCCAGGCCAGGCGCAAGTACCAGGAAGCCAGCAAAGACAAGGATCGAGACAAGGCCAAAGACAAGTATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000080932.8
ENSMUST00000205617.2
ENSMUST00000206728.2
CDS CAA 72 bp TGGTGGGCAAAGAGCTTCCACAGGCTCCGGACATACTaGTCTTTGGCCTTGTCTCGATCCTTGTCAGGGTCC +
Preference number: 6 (lower is better)
Translates to: WWAKSFHRLRTY*SLALSRSLSGS
Trigger: GGACCCTGACAAGGATCGAGACAAGGCCAAAGACAAGTATGTCCGGAGCCTGTGGAAGCTCTTTGCCCACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206479.2
CDS CCA 72 bp ACTTGTCTTTGGCCTTGTCTCGATCCTTGTCTTTGCTaGCTTCCTGGTACTTGCGCCTGGCCTGGGTGCTAT +
Preference number: 6 (lower is better)
Translates to: TCLWPCLDPCLC*LPGTCAWPGCY
Trigger: ATAGCACCCAGGCCAGGCGCAAGTACCAGGAAGCCAGCAAAGACAAGGATCGAGACAAGGCCAAAGACAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000080932.8
ENSMUST00000205617.2
ENSMUST00000206728.2
CDS CAA 72 bp AGCTTCCACAGGCTCCGGACATACTTGTCTTTGGCCTaGTCTCGATCCTTGTCAGGGTCCGGTACTGAGTCT +
Preference number: 6 (lower is better)
Translates to: SFHRLRTYLSLA*SRSLSGSGTES
Trigger: AGACTCAGTACCGGACCCTGACAAGGATCGAGACAAGGCCAAAGACAAGTATGTCCGGAGCCTGTGGAAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206479.2
CDS CAA 72 bp GCAAAGAGCTTCCACAGGCTCCGGACATACTTGTCTTaGGCCTTGTCTCGATCCTTGTCAGGGTCCGGTACT +
Preference number: 6 (lower is better)
Translates to: AKSFHRLRTYLS*ALSRSLSGSGT
Trigger: AGTACCGGACCCTGACAAGGATCGAGACAAGGCCAAAGACAAGTATGTCCGGAGCCTGTGGAAGCTCTTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206479.2
CDS CAA 90 bp TGGGCAAAGAGCTTCCACAGGCTCCGGACATACTTGTCTTTGGCCTaGTCTCGATCCTTGTCAGGGTCCGGTACTGAGTCTTCAGCTTCT +
Preference number: 6 (lower is better)
Translates to: WAKSFHRLRTYLSLA*SRSLSGSGTESSAS
Trigger: AGAAGCTGAAGACTCAGTACCGGACCCTGACAAGGATCGAGACAAGGCCAAAGACAAGTATGTCCGGAGCCTGTGGAAGCTCTTTGCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206479.2
CDS CAA 90 bp TTGTGGTGGGCAAAGAGCTTCCACAGGCTCCGGACATACTTGTCTTaGGCCTTGTCTCGATCCTTGTCAGGGTCCGGTACTGAGTCTTCA +
Preference number: 6 (lower is better)
Translates to: LWWAKSFHRLRTYLS*ALSRSLSGSGTESS
Trigger: TGAAGACTCAGTACCGGACCCTGACAAGGATCGAGACAAGGCCAAAGACAAGTATGTCCGGAGCCTGTGGAAGCTCTTTGCCCACCACAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206479.2
CDS CAA 72 bp AGCTTCCACAGGCTCCGGACATACTTGTCTTTGGCCTaGTCTCGATCCTTGTCTTTGCTGGCTTCCTGGTAC +
Preference number: 6 (lower is better)
Translates to: SFHRLRTYLSLA*SRSLSLLASWY
Trigger: GTACCAGGAAGCCAGCAAAGACAAGGATCGAGACAAGGCCAAAGACAAGTATGTCCGGAGCCTGTGGAAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000080932.8
ENSMUST00000205617.2
ENSMUST00000206728.2
CDS CAA 72 bp GCAAAGAGCTTCCACAGGCTCCGGACATACTTGTCTTaGGCCTTGTCTCGATCCTTGTCTTTGCTGGCTTCC +
Preference number: 6 (lower is better)
Translates to: AKSFHRLRTYLS*ALSRSLSLLAS
Trigger: GGAAGCCAGCAAAGACAAGGATCGAGACAAGGCCAAAGACAAGTATGTCCGGAGCCTGTGGAAGCTCTTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000080932.8
ENSMUST00000205617.2
ENSMUST00000206728.2
CDS CAA 72 bp TGGTGGGCAAAGAGCTTCCACAGGCTCCGGACATACTaGTCTTTGGCCTTGTCTCGATCCTTGTCTTTGCTG +
Preference number: 6 (lower is better)
Translates to: WWAKSFHRLRTY*SLALSRSLSLL
Trigger: CAGCAAAGACAAGGATCGAGACAAGGCCAAAGACAAGTATGTCCGGAGCCTGTGGAAGCTCTTTGCCCACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000080932.8
ENSMUST00000205617.2
ENSMUST00000206728.2
CDS CAA 90 bp TTGTGGTGGGCAAAGAGCTTCCACAGGCTCCGGACATACTTGTCTTaGGCCTTGTCTCGATCCTTGTCTTTGCTGGCTTCCTGGTACTTG +
Preference number: 6 (lower is better)
Translates to: LWWAKSFHRLRTYLS*ALSRSLSLLASWYL
Trigger: CAAGTACCAGGAAGCCAGCAAAGACAAGGATCGAGACAAGGCCAAAGACAAGTATGTCCGGAGCCTGTGGAAGCTCTTTGCCCACCACAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000080932.8
ENSMUST00000205617.2
ENSMUST00000206728.2
CDS CAA 72 bp CTCCGGACATACTTGTCTTTGGCCTTGTCTCGATCCTaGTCAGGGTCCGGTACTGAGTCTTCAGCTTCTCAA +
Preference number: 6 (lower is better)
Translates to: LRTYLSLALSRS*SGSGTESSASQ
Trigger: TTGAGAAGCTGAAGACTCAGTACCGGACCCTGACAAGGATCGAGACAAGGCCAAAGACAAGTATGTCCGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206479.2