RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FERMT3 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000024965

Ensembl transcript IDs: ENSMUST00000040772.9, ENSMUST00000236188.2, ENSMUST00000237888.2, ENSMUST00000237960.2

Found 232 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CATCCCGGGAGTGATGGAGCAGTGTGTTCAGGTGGGTGTGGCCTTTaGGGGGTCCCTGGAGGTGGTGAGTGGAGCAGGGGCTGCCCTCAG +
Preference number: 1 (lower is better)
Translates to: HPGSDGAVCSGGCGL*GVPGGGEWSRGCPQ
Trigger: CTGAGGGCAGCCCCTGCTCCACTCACCACCTCCAGGGACCCCCCAAAGGCCACACCCACCTGAACACACTGCTCCATCACTCCCGGGATG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000237888.2
ENSMUST00000237960.2
3UTR GCA 90 bp CTAGGCTGGCTGGTGGTAGCACCTACCCCAGCGAGGGCCCTGGCCTaGCTGGTGACAACAAGTGAAGTTGCCCAGCAGTGTACATCCCGG +
Preference number: 1 (lower is better)
Translates to: LGWLVVAPTPARALA*LVTTSEVAQQCTSR
Trigger: CCGGGATGTACACTGCTGGGCAACTTCACTTGTTGTCACCAGGCAGGCCAGGGCCCTCGCTGGGGTAGGTGCTACCACCAGCCAGCCTAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000040772.9
ENSMUST00000237888.2
ENSMUST00000237960.2
3UTR CCA 90 bp TCGATCTCCTCTGTCAGTAAGTCCCAGCGGGCCTGCTCATACAGCTaGGTCAGCCGCACAGGGTCTGTCTGCCCACAGCCTAGGCAGGCA +
Preference number: 1 (lower is better)
Translates to: SISSVSKSQRACSYS*VSRTGSVCPQPRQA
Trigger: TGCCTGCCTAGGCTGTGGGCAGACAGACCCTGTGCGGCTGACCCAGCTGTATGAGCAGGCCCGCTGGGACTTACTGACAGAGGAGATCGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237960.2
3UTR TCA 90 bp GTTTGTTCCCTGAGCCTCCATTGCTACCACCTGCCCGCTGCAGGCTaGGGAAGGCCAGAATGGCCTGCACCTCGCTGGCATAGCTGCTGT +
Preference number: 1 (lower is better)
Translates to: VCSLSLHCYHLPAAG*GRPEWPAPRWHSCC
Trigger: ACAGCAGCTATGCCAGCGAGGTGCAGGCCATTCTGGCCTTCCTCAGCCTGCAGCGGGCAGGTGGTAGCAATGGAGGCTCAGGGAACAAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237960.2
3UTR GCA 90 bp CGTCGTGTGCTTAGGGACTACATAGAGGTCGGGGGTGTGAGCTTCTaGCAACAGGGTGAGAGGAGGGGCTCTGTGTGGCTCAGGGCCCAT +
Preference number: 1 (lower is better)
Translates to: RRVLRDYIEVGGVSF*QQGERRGSVWLRAH
Trigger: ATGGGCCCTGAGCCACACAGAGCCCCTCCTCTCACCCTGTTGGCAGAAGCTCACACCCCCGACCTCTATGTAGTCCCTAAGCACACGACG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000040772.9
ENSMUST00000237888.2
ENSMUST00000237960.2
3UTR GCA 90 bp TCTTCAGTGCAGTCGATCTCCTCTGTCAGTAAGTCCCAGCGGGCCTaGTCATACAGCTGGGTCAGCCGCACAGGGTCTGTCTGCCCACAG +
Preference number: 1 (lower is better)
Translates to: SSVQSISSVSKSQRA*SYSWVSRTGSVCPQ
Trigger: CTGTGGGCAGACAGACCCTGTGCGGCTGACCCAGCTGTATGAGCAGGCCCGCTGGGACTTACTGACAGAGGAGATCGACTGCACTGAAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237960.2
3UTR TCA 90 bp CCCCAGAGGCCAGCTCACCCACATCCCCGCTCAGGGTCAGTTTGTTaGTGTGGTACTGCAGGGCAGCAAACACCATCATCTCTTCTTCAG +
Preference number: 1 (lower is better)
Translates to: PQRPAHPHPRSGSVC*CGTAGQQTPSSLLQ
Trigger: CTGAAGAAGAGATGATGGTGTTTGCTGCCCTGCAGTACCACATCAACAAACTGACCCTGAGCGGGGATGTGGGTGAGCTGGCCTCTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000237960.2
3UTR CCA 90 bp GAGGCCAGCTCACCCACATCCCCGCTCAGGGTCAGTTTGTTGATGTaGTACTGCAGGGCAGCAAACACCATCATCTCTTCTTCAGTGCAG +
Preference number: 1 (lower is better)
Translates to: EASSPTSPLRVSLLM*YCRAANTIISSSVQ
Trigger: CTGCACTGAAGAAGAGATGATGGTGTTTGCTGCCCTGCAGTACCACATCAACAAACTGACCCTGAGCGGGGATGTGGGTGAGCTGGCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000237960.2
3UTR CCA 90 bp CACTCCCTCCAGGCAGGCCCTATACTTAACCGGAAGATCCGGAGATaGTCCTTGAGTTCTGGGATGGTAGTGAGACTATCCAGCATGTCT +
Preference number: 1 (lower is better)
Translates to: HSLQAGPILNRKIRR*SLSSGMVVRLSSMS
Trigger: AGACATGCTGGATAGTCTCACTACCATCCCAGAACTCAAGGACCATCTCCGGATCTTCCGGTTAAGTATAGGGCCTGCCTGGAGGGAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237960.2
3UTR-3UTR TCA 90 bp CTAGGCTGGCTGGTGGTAGCACCTACCCCAGCGAGGGCCCTGGCCTGCCTGGTGCTGCCCGCTGCAGGCTaGGGAAGGCCAGAATGGCCT +
Preference number: 2 (lower is better)
Translates to: LGWLVVAPTPARALACLVLPAAG*GRPEWP
Trigger: AGGCCATTCTGGCCTTCCTCAGCCTGCAGCGGGCAG...CACCAGGCAGGCCAGGGCCCTCGCTGGGGTAGGTGCTACCACCAGCCAGCCTAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000237960.2
3UTR-3UTR CCA 90 bp TCCCTAGGCTGGCTGGTGGTAGCACCTACCCCAGCGAGGGCCCTGGCCTGCCTGCCTGGAGGTGGTGAGTaGAGCAGGGGCTGCCCTCAG +
Preference number: 2 (lower is better)
Translates to: SLGWLVVAPTPARALACLPGGGE*SRGCPQ
Trigger: CTGAGGGCAGCCCCTGCTCCACTCACCACCTCCAGG...CAGGCAGGCCAGGGCCCTCGCTGGGGTAGGTGCTACCACCAGCCAGCCTAGGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000237888.2
ENSMUST00000237960.2
3UTR-3UTR CCA 90 bp CTAGGCTGGCTGGTGGTAGCACCTACCCCAGCGAGGGCCCTGGCCTGCCTGGTGTTGAGGTTGAGCTGCTaGGTAGGGTCCCCCGGTGCT +
Preference number: 2 (lower is better)
Translates to: LGWLVVAPTPARALACLVLRLSC*VGSPGA
Trigger: AGCACCGGGGGACCCTACCCAGCAGCTCAACCTCAA...CACCAGGCAGGCCAGGGCCCTCGCTGGGGTAGGTGCTACCACCAGCCAGCCTAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000237960.2
3UTR-3UTR CCA 90 bp CTAGGCTGGCTGGTGGTAGCACCTACCCCAGCGAGGGCCCTGGCCTGCCTGGTGCCTCAGAAGGCCTCATaGCCTCCTGTAAGCTGCAGG +
Preference number: 2 (lower is better)
Translates to: LGWLVVAPTPARALACLVPQKAS*PPVSCR
Trigger: CCTGCAGCTTACAGGAGGCCATGAGGCCTTCTGAGG...CACCAGGCAGGCCAGGGCCCTCGCTGGGGTAGGTGCTACCACCAGCCAGCCTAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000237888.2
ENSMUST00000237960.2
3UTR-3UTR GCA 90 bp GCTCTTCCCCTCGGGCCCGCTCTCGGGTGGACAGGAAGATGTAACCCCCGATGTGAGTGGAGCAGGGGCTaGCCTCAGAAGGCCTCATGG +
Preference number: 2 (lower is better)
Translates to: ALPLGPALGWTGRCNPRCEWSRG*PQKASW
Trigger: CCATGAGGCCTTCTGAGGGCAGCCCCTGCTCCACTC...ACATCGGGGGTTACATCTTCCTGTCCACCCGAGAGCGGGCCCGAGGGGAAGAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000237888.2
ENSMUST00000237960.2
3UTR-3UTR CCA 90 bp GGGGCTCTGTGTGGCTCAGGGCCCATCATCCCTAGGCTGGCTGGTGGTAGCACCGCCTGCTCATACAGCTaGGTCAGCCGCACAGGGTCT +
Preference number: 2 (lower is better)
Translates to: GALCGSGPIIPRLAGGSTACSYS*VSRTGS
Trigger: AGACCCTGTGCGGCTGACCCAGCTGTATGAGCAGGC...GGTGCTACCACCAGCCAGCCTAGGGATGATGGGCCCTGAGCCACACAGAGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000237960.2
3UTR-3UTR TCA 90 bp GGGGCTCTGTGTGGCTCAGGGCCCATCATCCCTAGGCTGGCTGGTGGTAGCACCACCTGTCTGCCCTGCTaGCTGAAGGCACAGTACACT +
Preference number: 2 (lower is better)
Translates to: GALCGSGPIIPRLAGGSTTCLPC*LKAQYT
Trigger: AGTGTACTGTGCCTTCAGTCAGCAGGGCAGACAGGT...GGTGCTACCACCAGCCAGCCTAGGGATGATGGGCCCTGAGCCACACAGAGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000237888.2
ENSMUST00000237960.2
3UTR-3UTR TCA 90 bp CCCCTCGGGCCCGCTCTCGGGTGGACAGGAAGATGTAACCCCCGATGTACTCGTTGTACATCCCGGGAGTaGTGGAGCAGTGTGTTCAGG +
Preference number: 2 (lower is better)
Translates to: PLGPALGWTGRCNPRCTRCTSRE*WSSVFR
Trigger: CCTGAACACACTGCTCCATCACTCCCGGGATGTACA...ACGAGTACATCGGGGGTTACATCTTCCTGTCCACCCGAGAGCGGGCCCGAGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000237888.2
ENSMUST00000237960.2
3UTR-3UTR TCA 90 bp AGGGGCTGCCCTCAGAAGGCCTCATGGCCTCCTGTAAGCTGCAGGAACAGATCCCTTCTGCCAACAGGGTaGGAGGAGGGGCTCTGTGTG +
Preference number: 2 (lower is better)
Translates to: RGCPQKASWPPVSCRNRSLLPTG*EEGLCV
Trigger: CACACAGAGCCCCTCCTCTCACCCTGTTGGCAGAAG...GGATCTGTTCCTGCAGCTTACAGGAGGCCATGAGGCCTTCTGAGGGCAGCCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000237888.2
ENSMUST00000237960.2
3UTR-3UTR GCA 90 bp GCCCTGGCCTGCCTGGTGACAACAAGTGAAGTTGCCCAGCAGTGTACATCCCGGGCGAGGGCCCTGGCCTaGCTGGTGACAACAAGTGAA +
Preference number: 2 (lower is better)
Translates to: ALACLVTTSEVAQQCTSRARALA*LVTTSE
Trigger: TTCACTTGTTGTCACCAGGCAGGCCAGGGCCCTCGC...CCGGGATGTACACTGCTGGGCAACTTCACTTGTTGTCACCAGGCAGGCCAGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000040772.9
ENSMUST00000237888.2
ENSMUST00000237960.2
3UTR-3UTR GCA 90 bp CGTGTGCTTAGGGACTACATAGAGGTCGGGGGTGTGAGCTTCTGCCAACAGGGTCCTCGCTGGCATAGCTaGTGTCCGCCATGGTGCGGC +
Preference number: 2 (lower is better)
Translates to: RVLRDYIEVGGVSFCQQGPRWHS*CPPWCG
Trigger: GCCGCACCATGGCGGACAGCAGCTATGCCAGCGAGG...ACCCTGTTGGCAGAAGCTCACACCCCCGACCTCTATGTAGTCCCTAAGCACACG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000237960.2
3UTR-3UTR CCA 90 bp CTAGGCTGGCTGGTGGTAGCACCTACCCCAGCGAGGGCCCTGGCCTGCCTGGTGACAGTACACTGGTCCTaGAACAAGAGAAAGCGACCA +
Preference number: 2 (lower is better)
Translates to: LGWLVVAPTPARALACLVTVHWS*NKRKRP
Trigger: TGGTCGCTTTCTCTTGTTCCAGGACCAGTGTACTGT...CACCAGGCAGGCCAGGGCCCTCGCTGGGGTAGGTGCTACCACCAGCCAGCCTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000237888.2
ENSMUST00000237960.2
3UTR-3UTR CCA 90 bp GACGTTCCATTGCCGCATGTTGCTGAAGCGCCAGGTCTTGACCACGTCACCCACGAAGCGTGTGAACCATaGCCTCCCTGCCTCCCACCC +
Preference number: 2 (lower is better)
Translates to: DVPLPHVAEAPGLDHVTHEACEP*PPCLPP
Trigger: GGGTGGGAGGCAGGGAGGCCATGGTTCACACGCTTC...GTGGGTGACGTGGTCAAGACCTGGCGCTTCAGCAACATGCGGCAATGGAACGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237960.2
3UTR CAA 90 bp TCCAGCATGTCTGAGGGTGCTGACCCCTTCAGCTTCACCTCCAGGTaGTTCAGGGCTGCATCCAGGTCATCCAGTCCCAGGTCCCCAGAG +
Preference number: 2 (lower is better)
Translates to: SSMSEGADPFSFTSR*FRAASRSSSPRSPE
Trigger: CTCTGGGGACCTGGGACTGGATGACCTGGATGCAGCCCTGAACAACCTGGAGGTGAAGCTGAAGGGGTCAGCACCCTCAGACATGCTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000237960.2
3UTR-3UTR CCA 90 bp GATGTGACTGAATCGGGTCCTACAATGGCCCTGGAACCCTTCCAGAGAGGAGTCAGCTGCTGTCCGCCATaGTGCGGCCCTTGGAGGCCA +
Preference number: 2 (lower is better)
Translates to: DVTESGPTMALEPFQRGVSCCPP*CGPWRP
Trigger: TGGCCTCCAAGGGCCGCACCATGGCGGACAGCAGCT...GACTCCTCTCTGGAAGGGTTCCAGGGCCATTGTAGGACCCGATTCAGTCACATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237960.2
3UTR-3UTR GCA 90 bp GATGTGACTGAATCGGGTCCTACAATGGCCCTGGAACCCTTCCAGAGAGGAGTCGAGTGGAGCAGGGGCTaGCCTCAGAAGGCCTCATGG +
Preference number: 2 (lower is better)
Translates to: DVTESGPTMALEPFQRGVEWSRG*PQKASW
Trigger: CCATGAGGCCTTCTGAGGGCAGCCCCTGCTCCACTC...GACTCCTCTCTGGAAGGGTTCCAGGGCCATTGTAGGACCCGATTCAGTCACATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000237888.2
ENSMUST00000237960.2
3UTR-3UTR CCA 90 bp GGGGCTCTGTGTGGCTCAGGGCCCATCATCCCTAGGCTGGCTGGTGGTAGCACCGTCAGTTTGTTGATGTaGTACTGCAGGGCAGCAAAC +
Preference number: 2 (lower is better)
Translates to: GALCGSGPIIPRLAGGSTVSLLM*YCRAAN
Trigger: GTTTGCTGCCCTGCAGTACCACATCAACAAACTGAC...GGTGCTACCACCAGCCAGCCTAGGGATGATGGGCCCTGAGCCACACAGAGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000237960.2
3UTR-3UTR CCA 90 bp GTGCTTAGGGACTACATAGAGGTCGGGGGTGTGAGCTTCTGCCAACAGGGTGAGAAGGATTGCCAGGCCTaGATAAAGCGCAGCTGGGCC +
Preference number: 2 (lower is better)
Translates to: VLRDYIEVGGVSFCQQGEKDCQA*IKRSWA
Trigger: GGCCCAGCTGCGCTTTATCCAGGCCTGGCAATCCTT...CTCACCCTGTTGGCAGAAGCTCACACCCCCGACCTCTATGTAGTCCCTAAGCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000237888.2
ENSMUST00000237960.2
3UTR-3UTR GCA 90 bp AATCGGGTCCTACAATGGCCCTGGAACCCTTCCAGAGAGGAGTCTGGGACATGGGGCAGCCATCCACTGTaGGTACTGCTGTTCATCCTG +
Preference number: 2 (lower is better)
Translates to: NRVLQWPWNPSREESGTWGSHPL*VLLFIL
Trigger: CAGGATGAACAGCAGTACGCACAGTGGATGGCTGCC...CCATGTCCCAGACTCCTCTCTGGAAGGGTTCCAGGGCCATTGTAGGACCCGATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000237960.2
3UTR-3UTR CCA 90 bp CGTGTGCTTAGGGACTACATAGAGGTCGGGGGTGTGAGCTTCTGCCAACAGGGTGTCCTACAATGGCCCTaGAACCCTTCCAGAGAGGAG +
Preference number: 2 (lower is better)
Translates to: RVLRDYIEVGGVSFCQQGVLQWP*NPSREE
Trigger: CTCCTCTCTGGAAGGGTTCCAGGGCCATTGTAGGAC...ACCCTGTTGGCAGAAGCTCACACCCCCGACCTCTATGTAGTCCCTAAGCACACG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000237888.2
ENSMUST00000237960.2
3UTR-3UTR CCA 90 bp ACAGCTGAAGGCCACATTGATGTGTTCATCGAACTCAATGGCCACCTGCCGTATCCTGGAGGTGGTGAGTaGAGCAGGGGCTGCCCTCAG +
Preference number: 2 (lower is better)
Translates to: TAEGHIDVFIELNGHLPYPGGGE*SRGCPQ
Trigger: CTGAGGGCAGCCCCTGCTCCACTCACCACCTCCAGG...ATACGGCAGGTGGCCATTGAGTTCGATGAACACATCAATGTGGCCTTCAGCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000237888.2
ENSMUST00000237960.2
3UTR CAA 90 bp TCGTGCACGATGCGGCAGCTAGCAGACACACAGCTGAAGGCCACATaGATGTGTTCATCGAACTCAATGGCCACCTGCCGTATGTCCCAG +
Preference number: 2 (lower is better)
Translates to: SCTMRQLADTQLKAT*MCSSNSMATCRMSQ
Trigger: CTGGGACATACGGCAGGTGGCCATTGAGTTCGATGAACACATCAATGTGGCCTTCAGCTGTGTGTCTGCTAGCTGCCGCATCGTGCACGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000237888.2
ENSMUST00000237960.2
3UTR-3UTR GCA 90 bp CCTACAATGGCCCTGGAACCCTTCCAGAGAGGAGTCTGGGACATGGCAGGATTAAAGTCGGGCAAGGATTaGCAGGCCTGGATAAAGCGC +
Preference number: 2 (lower is better)
Translates to: PTMALEPFQRGVWDMAGLKSGKD*QAWIKR
Trigger: GCGCTTTATCCAGGCCTGGCAATCCTTGCCCGACTT...TAATCCTGCCATGTCCCAGACTCCTCTCTGGAAGGGTTCCAGGGCCATTGTAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000237888.2
ENSMUST00000237960.2
3UTR CAA 90 bp TTGACCACGTCACCCACGGCCAGATCAATCCGGATGAGTCGGTTGTaGGCAATGCCTAGGATCTCATCTTTCCTGCTGCCCTTGAACCTG +
Preference number: 2 (lower is better)
Translates to: LTTSPTARSIRMSRL*AMPRISSFLLPLNL
Trigger: CAGGTTCAAGGGCAGCAGGAAAGATGAGATCCTAGGCATTGCCAACAACCGACTCATCCGGATTGATCTGGCCGTGGGTGACGTGGTCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000237888.2
ENSMUST00000237960.2
3UTR CAA 90 bp GTCTTGACCACGTCACCCACGGCCAGATCAATCCGGATGAGTCGGTaGTTGGCAATGCCTAGGATCTCATCTTTCCTGCTGCCCTTGAAC +
Preference number: 2 (lower is better)
Translates to: VLTTSPTARSIRMSR*LAMPRISSFLLPLN
Trigger: GTTCAAGGGCAGCAGGAAAGATGAGATCCTAGGCATTGCCAACAACCGACTCATCCGGATTGATCTGGCCGTGGGTGACGTGGTCAAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000237888.2
ENSMUST00000237960.2
3UTR-3UTR GCA 90 bp ACAGCTGAAGGCCACATTGATGTGTTCATCGAACTCAATGGCCACCTGCCGTATGGGGGTGTGAGCTTCTaGCAACAGGGTGAGAGGAGG +
Preference number: 2 (lower is better)
Translates to: TAEGHIDVFIELNGHLPYGGVSF*QQGERR
Trigger: CCTCCTCTCACCCTGTTGGCAGAAGCTCACACCCCC...ATACGGCAGGTGGCCATTGAGTTCGATGAACACATCAATGTGGCCTTCAGCTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000237888.2
ENSMUST00000237960.2
3UTR-3UTR GCA 90 bp GTGTACATCCCGGGAGTGATGGAGCAGTGTGTTCAGGTGGGTGTGGCCTTTGGGCCATCACATAGGAGATaGCAAAGTCGGGCAAGGATT +
Preference number: 2 (lower is better)
Translates to: VYIPGVMEQCVQVGVAFGPSHRR*QSRARI
Trigger: AATCCTTGCCCGACTTTGGCATCTCCTATGTGATGG...CCCAAAGGCCACACCCACCTGAACACACTGCTCCATCACTCCCGGGATGTACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000237888.2
ENSMUST00000237960.2
3UTR-3UTR GCA 90 bp ATCGAACTCAATGGCCACCTGCCGTATGTCCCAGTTGACGTTCCATTGCCGCATCAGGTTGTTCAGGGCTaGATCCAGGTCATCCAGTCC +
Preference number: 2 (lower is better)
Translates to: IELNGHLPYVPVDVPLPHQVVQG*IQVIQS
Trigger: GGACTGGATGACCTGGATGCAGCCCTGAACAACCTG...ATGCGGCAATGGAACGTCAACTGGGACATACGGCAGGTGGCCATTGAGTTCGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237960.2
3UTR-3UTR CCA 90 bp CCCGCTCTCGGGTGGACAGGAAGATGTAACCCCCGATGTACTCGTGCACGATGCATGGTCCTTGAGTTCTaGGATGGTAGTGAGACTATC +
Preference number: 2 (lower is better)
Translates to: PALGWTGRCNPRCTRARCMVLEF*DGSETI
Trigger: GATAGTCTCACTACCATCCCAGAACTCAAGGACCAT...GCATCGTGCACGAGTACATCGGGGGTTACATCTTCCTGTCCACCCGAGAGCGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000237960.2
3UTR CAA 90 bp CTCCAGGCAGGCCCTATACTTAACCGGAAGATCCGGAGATGGTCCTaGAGTTCTGGGATGGTAGTGAGACTATCCAGCATGTCTGAGGGT +
Preference number: 2 (lower is better)
Translates to: LQAGPILNRKIRRWS*SSGMVVRLSSMSEG
Trigger: ACCCTCAGACATGCTGGATAGTCTCACTACCATCCCAGAACTCAAGGACCATCTCCGGATCTTCCGGTTAAGTATAGGGCCTGCCTGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237960.2
3UTR-3UTR GCA 90 bp AGAAAGAAAGTCCAGCTTCAAACCAGGATTTGTGGTTCCTCATCCGTGTCTGGCGGGGGTGTGAGCTTCTaGCAACAGGGTGAGAGGAGG +
Preference number: 2 (lower is better)
Translates to: RKKVQLQTRICGSSSVSGGGVSF*QQGERR
Trigger: CCTCCTCTCACCCTGTTGGCAGAAGCTCACACCCCC...GCCAGACACGGATGAGGAACCACAAATCCTGGTTTGAAGCTGGACTTTCTTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000040772.9
ENSMUST00000237888.2
ENSMUST00000237960.2
3UTR-3UTR CCA 90 bp ACACAGAAAGAAAGTCCAGCTTCAAACCAGGATTTGTGGTTCCTCATCCGTGTCAGGAGGGGCTCTGTGTaGCTCAGGGCCCATCATCCC +
Preference number: 2 (lower is better)
Translates to: TQKESPASNQDLWFLIRVRRGSV*LRAHHP
Trigger: GGGATGATGGGCCCTGAGCCACACAGAGCCCCTCCT...GACACGGATGAGGAACCACAAATCCTGGTTTGAAGCTGGACTTTCTTTCTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000040772.9
ENSMUST00000237888.2
ENSMUST00000237960.2
3UTR-3UTR TCA 90 bp CCTACAATGGCCCTGGAACCCTTCCAGAGAGGAGTCTGGGACATGGCAGGATTATCCAAAGTGCAGATGTaGCTGAATCGGGTCCTACAA +
Preference number: 2 (lower is better)
Translates to: PTMALEPFQRGVWDMAGLSKVQM*LNRVLQ
Trigger: TTGTAGGACCCGATTCAGTCACATCTGCACTTTGGA...TAATCCTGCCATGTCCCAGACTCCTCTCTGGAAGGGTTCCAGGGCCATTGTAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000237888.2
ENSMUST00000237960.2
3UTR-3UTR GCA 90 bp CACAGAAAGAAAGTCCAGCTTCAAACCAGGATTTGTGGTTCCTCATCCGTGTCTGGGGGTGTGAGCTTCTaGCAACAGGGTGAGAGGAGG +
Preference number: 2 (lower is better)
Translates to: HRKKVQLQTRICGSSSVSGGVSF*QQGERR
Trigger: CCTCCTCTCACCCTGTTGGCAGAAGCTCACACCCCC...AGACACGGATGAGGAACCACAAATCCTGGTTTGAAGCTGGACTTTCTTTCTGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000040772.9
ENSMUST00000237888.2
ENSMUST00000237960.2
3UTR-3UTR GCA 90 bp TCCTACAATGGCCCTGGAACCCTTCCAGAGAGGAGTCTGGGACATGGCAGGATTTTGTTGATGTGGTACTaGAGGGCAGCAAACACCATC +
Preference number: 2 (lower is better)
Translates to: SYNGPGTLPERSLGHGRILLMWY*RAANTI
Trigger: GATGGTGTTTGCTGCCCTGCAGTACCACATCAACAA...AATCCTGCCATGTCCCAGACTCCTCTCTGGAAGGGTTCCAGGGCCATTGTAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000237960.2
3UTR-3UTR CCA 90 bp ACAGCTGAAGGCCACATTGATGTGTTCATCGAACTCAATGGCCACCTGCCGTATGTCCTACAATGGCCCTaGAACCCTTCCAGAGAGGAG +
Preference number: 2 (lower is better)
Translates to: TAEGHIDVFIELNGHLPYVLQWP*NPSREE
Trigger: CTCCTCTCTGGAAGGGTTCCAGGGCCATTGTAGGAC...ATACGGCAGGTGGCCATTGAGTTCGATGAACACATCAATGTGGCCTTCAGCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000237888.2
ENSMUST00000237960.2
3UTR-3UTR CCA 90 bp GATGTGACTGAATCGGGTCCTACAATGGCCCTGGAACCCTTCCAGAGAGGAGTCACAGTACACTGGTCCTaGAACAAGAGAAAGCGACCA +
Preference number: 2 (lower is better)
Translates to: DVTESGPTMALEPFQRGVTVHWS*NKRKRP
Trigger: TGGTCGCTTTCTCTTGTTCCAGGACCAGTGTACTGT...GACTCCTCTCTGGAAGGGTTCCAGGGCCATTGTAGGACCCGATTCAGTCACATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000237888.2
ENSMUST00000237960.2
3UTR-3UTR TCA 90 bp AGAAAGAAAGTCCAGCTTCAAACCAGGATTTGTGGTTCCTCATCCGTGTCTGGCTGTACATCCCGGGAGTaGTGGAGCAGTGTGTTCAGG +
Preference number: 2 (lower is better)
Translates to: RKKVQLQTRICGSSSVSGCTSRE*WSSVFR
Trigger: CCTGAACACACTGCTCCATCACTCCCGGGATGTACA...GCCAGACACGGATGAGGAACCACAAATCCTGGTTTGAAGCTGGACTTTCTTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000040772.9
ENSMUST00000237888.2
ENSMUST00000237960.2
3UTR-3UTR GCA 90 bp GCAGCTAGCAGACACACAGCTGAAGGCCACATTGATGTGTTCATCGAACTCAATACTCCCTCAGGCACCTaGTTGGCCTTGAACTTTCGC +
Preference number: 2 (lower is better)
Translates to: AASRHTAEGHIDVFIELNTPSGT*LALNFR
Trigger: GCGAAAGTTCAAGGCCAAGCAGGTGCCTGAGGGAGT...ATTGAGTTCGATGAACACATCAATGTGGCCTTCAGCTGTGTGTCTGCTAGCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237960.2
3UTR-3UTR CCA 90 bp TTGATGCAGAACTTCTGGCCAGAGACATTGACATCAGGGACCACCTCACAGCCCTCAAACCAGGATTTGTaGTTCCTCATCCGTGTCTGG +
Preference number: 2 (lower is better)
Translates to: LMQNFWPETLTSGTTSQPSNQDL*FLIRVW
Trigger: CCAGACACGGATGAGGAACCACAAATCCTGGTTTGA...GGGCTGTGAGGTGGTCCCTGATGTCAATGTCTCTGGCCAGAAGTTCTGCATCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237960.2
3UTR CAA 90 bp TTAGGAAGGAGTGGCTATAAGGATTCCCTAAGGAAGAGTGTGCTGTaGGAGGTCCAGGGGTCAAGGGTGGATAGGAAAATGTGGTGGTTC +
Preference number: 2 (lower is better)
Translates to: LGRSGYKDSLRKSVL*EVQGSRVDRKMWWF
Trigger: GAACCACCACATTTTCCTATCCACCCTTGACCCCTGGACCTCCAACAGCACACTCTTCCTTAGGGAATCCTTATAGCCACTCCTTCCTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000237960.2
3UTR-3UTR TCA 90 bp GCAGGATTAGGAAGGAGTGGCTATAAGGATTCCCTAAGGAAGAGTGTGCTGTTGCCTGGTGACAACAAGTaGAGTTGCCCAGCAGTGTAC +
Preference number: 2 (lower is better)
Translates to: AGLGRSGYKDSLRKSVLLPGDNK*SCPAVY
Trigger: GTACACTGCTGGGCAACTTCACTTGTTGTCACCAGG...CAACAGCACACTCTTCCTTAGGGAATCCTTATAGCCACTCCTTCCTAATCCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000237888.2
ENSMUST00000237960.2
3UTR-3UTR TCA 90 bp CTGAAACAGACACAGAAAGAAAGTCCAGCTTCAAACCAGGATTTGTGGTTCCTCGTCTGCCCTGCTGACTaGAGGCACAGTACACTGGTC +
Preference number: 2 (lower is better)
Translates to: LKQTQKESPASNQDLWFLVCPAD*RHSTLV
Trigger: GACCAGTGTACTGTGCCTTCAGTCAGCAGGGCAGAC...GAGGAACCACAAATCCTGGTTTGAAGCTGGACTTTCTTTCTGTGTCTGTTTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000237888.2
ENSMUST00000237960.2
3UTR-3UTR CCA 90 bp ACAGCTGAAGGCCACATTGATGTGTTCATCGAACTCAATGGCCACCTGCCGTATTCCAGGGGTCAAGGGTaGATAGGAAAATGTGGTGGT +
Preference number: 2 (lower is better)
Translates to: TAEGHIDVFIELNGHLPYSRGQG*IGKCGG
Trigger: ACCACCACATTTTCCTATCCACCCTTGACCCCTGGA...ATACGGCAGGTGGCCATTGAGTTCGATGAACACATCAATGTGGCCTTCAGCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000237960.2
3UTR-3UTR TCA 90 bp AAAGAAAGTCCAGCTTCAAACCAGGATTTGTGGTTCCTCATCCGTGTCTGGCATCCTGGTGACAACAAGTaGAGTTGCCCAGCAGTGTAC +
Preference number: 2 (lower is better)
Translates to: KESPASNQDLWFLIRVWHPGDNK*SCPAVY
Trigger: GTACACTGCTGGGCAACTTCACTTGTTGTCACCAGG...ATGCCAGACACGGATGAGGAACCACAAATCCTGGTTTGAAGCTGGACTTTCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000040772.9
ENSMUST00000237888.2
ENSMUST00000237960.2
3UTR-3UTR CCA 90 bp ACAGCTGAAGGCCACATTGATGTGTTCATCGAACTCAATGGCCACCTGCCGTATTCAAACCAGGATTTGTaGTTCCTCATCCGTGTCTGG +
Preference number: 2 (lower is better)
Translates to: TAEGHIDVFIELNGHLPYSNQDL*FLIRVW
Trigger: CCAGACACGGATGAGGAACCACAAATCCTGGTTTGA...ATACGGCAGGTGGCCATTGAGTTCGATGAACACATCAATGTGGCCTTCAGCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000237888.2
ENSMUST00000237960.2
3UTR-3UTR TCA 90 bp CTGAAACAGACACAGAAAGAAAGTCCAGCTTCAAACCAGGATTTGTGGTTCCTCCCTGGTGACAACAAGTaGAGTTGCCCAGCAGTGTAC +
Preference number: 2 (lower is better)
Translates to: LKQTQKESPASNQDLWFLPGDNK*SCPAVY
Trigger: GTACACTGCTGGGCAACTTCACTTGTTGTCACCAGG...GAGGAACCACAAATCCTGGTTTGAAGCTGGACTTTCTTTCTGTGTCTGTTTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000040772.9
ENSMUST00000237888.2
ENSMUST00000237960.2
3UTR-3UTR TCA 90 bp CTGAAACAGACACAGAAAGAAAGTCCAGCTTCAAACCAGGATTTGTGGTTCCTCTCAGGGTCAGTTTGTTaGTGTGGTACTGCAGGGCAG +
Preference number: 2 (lower is better)
Translates to: LKQTQKESPASNQDLWFLSGSVC*CGTAGQ
Trigger: CTGCCCTGCAGTACCACATCAACAAACTGACCCTGA...GAGGAACCACAAATCCTGGTTTGAAGCTGGACTTTCTTTCTGTGTCTGTTTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237960.2
3UTR CCA 72 bp GGGCTCTGTGTGGCTCAGGGCCCATCATCCCTAGGCTaGCTGGTGGTAGCACCTACCCCAGCGAGGGCCCTG +
Preference number: 3 (lower is better)
Translates to: GLCVAQGPSSLG*LVVAPTPARAL
Trigger: CAGGGCCCTCGCTGGGGTAGGTGCTACCACCAGCCAGCCTAGGGATGATGGGCCCTGAGCCACACAGAGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000040772.9
ENSMUST00000237888.2
ENSMUST00000237960.2
3UTR-3UTR CAA 90 bp TCCCTAGGCTGGCTGGTGGTAGCACCTACCCCAGCGAGGGCCCTGGCCTGCCTGCCCTCAGGCACCTGCTaGGCCTTGAACTTTCGCTGG +
Preference number: 3 (lower is better)
Translates to: SLGWLVVAPTPARALACLPSGTC*ALNFRW
Trigger: CCAGCGAAAGTTCAAGGCCAAGCAGGTGCCTGAGGG...CAGGCAGGCCAGGGCCCTCGCTGGGGTAGGTGCTACCACCAGCCAGCCTAGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000237960.2
3UTR-3UTR CAA 90 bp CTAGGCTGGCTGGTGGTAGCACCTACCCCAGCGAGGGCCCTGGCCTGCCTGGTGAAAGTCGGGCAAGGATaGCCAGGCCTGGATAAAGCG +
Preference number: 3 (lower is better)
Translates to: LGWLVVAPTPARALACLVKVGQG*PGLDKA
Trigger: CGCTTTATCCAGGCCTGGCAATCCTTGCCCGACTTT...CACCAGGCAGGCCAGGGCCCTCGCTGGGGTAGGTGCTACCACCAGCCAGCCTAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000237888.2
ENSMUST00000237960.2
3UTR-3UTR CAA 90 bp CTAGGCTGGCTGGTGGTAGCACCTACCCCAGCGAGGGCCCTGGCCTGCCTGGTGCCGCTCAGGGTCAGTTaGTTGATGTGGTACTGCAGG +
Preference number: 3 (lower is better)
Translates to: LGWLVVAPTPARALACLVPLRVS*LMWYCR
Trigger: CCTGCAGTACCACATCAACAAACTGACCCTGAGCGG...CACCAGGCAGGCCAGGGCCCTCGCTGGGGTAGGTGCTACCACCAGCCAGCCTAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000237960.2
3UTR CCA 72 bp AGTGATGGAGCAGTGTGTTCAGGTGGGTGTGGCCTTTaGGGGGTCCCTGGAGGTGGTGAGTGGAGCAGGGGC +
Preference number: 3 (lower is better)
Translates to: SDGAVCSGGCGL*GVPGGGEWSRG
Trigger: GCCCCTGCTCCACTCACCACCTCCAGGGACCCCCCAAAGGCCACACCCACCTGAACACACTGCTCCATCACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000040772.9
ENSMUST00000237888.2
ENSMUST00000237960.2
3UTR-3UTR CAA 90 bp CCGGGGCCTGGGGAGAGCCAGAAGCGTGTGAACCATGGCCTCCCTGCCTCCCACATCCGGAGATGGTCCTaGAGTTCTGGGATGGTAGTG +
Preference number: 3 (lower is better)
Translates to: PGPGESQKRVNHGLPASHIRRWS*SSGMVV
Trigger: CACTACCATCCCAGAACTCAAGGACCATCTCCGGAT...GTGGGAGGCAGGGAGGCCATGGTTCACACGCTTCTGGCTCTCCCCAGGCCCCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000237960.2
3UTR-3UTR CAA 90 bp GCTCTTCCCCTCGGGCCCGCTCTCGGGTGGACAGGAAGATGTAACCCCCGATGTTCACAGCCCTTGAGGTaGAGCTGCTGGGTAGGGTCC +
Preference number: 3 (lower is better)
Translates to: ALPLGPALGWTGRCNPRCSQPLR*SCWVGS
Trigger: GGACCCTACCCAGCAGCTCAACCTCAAGGGCTGTGA...ACATCGGGGGTTACATCTTCCTGTCCACCCGAGAGCGGGCCCGAGGGGAAGAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000237960.2
3UTR-3UTR CAA 90 bp CCCCTCGGGCCCGCTCTCGGGTGGACAGGAAGATGTAACCCCCGATGTACTCGTACCACCTCACAGCCCTaGAGGTTGAGCTGCTGGGTA +
Preference number: 3 (lower is better)
Translates to: PLGPALGWTGRCNPRCTRTTSQP*RLSCWV
Trigger: TACCCAGCAGCTCAACCTCAAGGGCTGTGAGGTGGT...ACGAGTACATCGGGGGTTACATCTTCCTGTCCACCCGAGAGCGGGCCCGAGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000237960.2
3UTR TCA 72 bp CCCAGCGAGGGCCCTGGCCTGCCTGGTGACAACAAGTaGAGTTGCCCAGCAGTGTACATCCCGGGAGTGATG +
Preference number: 3 (lower is better)
Translates to: PSEGPGLPGDNK*SCPAVYIPGVM
Trigger: CATCACTCCCGGGATGTACACTGCTGGGCAACTTCACTTGTTGTCACCAGGCAGGCCAGGGCCCTCGCTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000040772.9
ENSMUST00000237888.2
ENSMUST00000237960.2
3UTR GCA 72 bp CTGGTGGTAGCACCTACCCCAGCGAGGGCCCTGGCCTaGCTGGTGACAACAAGTGAAGTTGCCCAGCAGTGT +
Preference number: 3 (lower is better)
Translates to: LVVAPTPARALA*LVTTSEVAQQC
Trigger: ACACTGCTGGGCAACTTCACTTGTTGTCACCAGGCAGGCCAGGGCCCTCGCTGGGGTAGGTGCTACCACCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000040772.9
ENSMUST00000237888.2
ENSMUST00000237960.2
3UTR GCA 72 bp TTGTTCCCTGAGCCTCCATTGCTACCACCTGCCCGCTaGAGGCTGAGGAAGGCCAGAATGGCCTGCACCTCG +
Preference number: 3 (lower is better)
Translates to: LFPEPPLLPPAR*RLRKARMACTS
Trigger: CGAGGTGCAGGCCATTCTGGCCTTCCTCAGCCTGCAGCGGGCAGGTGGTAGCAATGGAGGCTCAGGGAACAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237960.2
3UTR CCA 72 bp TCTGTCAGTAAGTCCCAGCGGGCCTGCTCATACAGCTaGGTCAGCCGCACAGGGTCTGTCTGCCCACAGCCT +
Preference number: 3 (lower is better)
Translates to: SVSKSQRACSYS*VSRTGSVCPQP
Trigger: AGGCTGTGGGCAGACAGACCCTGTGCGGCTGACCCAGCTGTATGAGCAGGCCCGCTGGGACTTACTGACAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237960.2
3UTR GCA 72 bp CAGTCGATCTCCTCTGTCAGTAAGTCCCAGCGGGCCTaGTCATACAGCTGGGTCAGCCGCACAGGGTCTGTC +
Preference number: 3 (lower is better)
Translates to: QSISSVSKSQRA*SYSWVSRTGSV
Trigger: GACAGACCCTGTGCGGCTGACCCAGCTGTATGAGCAGGCCCGCTGGGACTTACTGACAGAGGAGATCGACTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237960.2
3UTR GCA 72 bp ACATCAGGGACCACCTCACAGCCCTTGAGGTTGAGCTaGTGGGTAGGGTCCCCCGGTGCTTCATCTTGGCTC +
Preference number: 3 (lower is better)
Translates to: TSGTTSQPLRLS*WVGSPGASSWL
Trigger: GAGCCAAGATGAAGCACCGGGGGACCCTACCCAGCAGCTCAACCTCAAGGGCTGTGAGGTGGTCCCTGATGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000237960.2
3UTR GCA 72 bp GCCCTTGGAGGCCAGTCGGCAGGCAGCCATCCACTGTaGGTACTGCTGTTCATCCTGGCACCTCAGGTAGAT +
Preference number: 3 (lower is better)
Translates to: ALGGQSAGSHPL*VLLFILAPQVD
Trigger: ATCTACCTGAGGTGCCAGGATGAACAGCAGTACGCACAGTGGATGGCTGCCTGCCGACTGGCCTCCAAGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237960.2
3UTR GCA 72 bp CTTAGGGACTACATAGAGGTCGGGGGTGTGAGCTTCTaGCAACAGGGTGAGAGGAGGGGCTCTGTGTGGCTC +
Preference number: 3 (lower is better)
Translates to: LRDYIEVGGVSF*QQGERRGSVWL
Trigger: GAGCCACACAGAGCCCCTCCTCTCACCCTGTTGGCAGAAGCTCACACCCCCGACCTCTATGTAGTCCCTAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000040772.9
ENSMUST00000237888.2
ENSMUST00000237960.2
3UTR-3UTR CAA 90 bp CCCTCAGAAGGCCTCATGGCCTCCTGTAAGCTGCAGGAACAGATCCTCATCCAGAGCTTCACCTCCAGGTaGTTCAGGGCTGCATCCAGG +
Preference number: 3 (lower is better)
Translates to: PSEGLMASCKLQEQILIQSFTSR*FRAASR
Trigger: CCTGGATGCAGCCCTGAACAACCTGGAGGTGAAGCT...CTGGATGAGGATCTGTTCCTGCAGCTTACAGGAGGCCATGAGGCCTTCTGAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237960.2
3UTR GCA 72 bp GCCCTTGAGGTTGAGCTGCTGGGTAGGGTCCCCCGGTaGTTCATCTTGGCTCTTATAGTAGGACAGTGTGGT +
Preference number: 3 (lower is better)
Translates to: ALEVELLGRVPR*FILALIVGQCG
Trigger: ACCACACTGTCCTACTATAAGAGCCAAGATGAAGCACCGGGGGACCCTACCCAGCAGCTCAACCTCAAGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000237960.2
3UTR CCA 72 bp CACCTGTCTGCCCTGCTGACTGAAGGCACAGTACACTaGTCCTGGAACAAGAGAAAGCGACCATTGCGGTGC +
Preference number: 3 (lower is better)
Translates to: HLSALLTEGTVH*SWNKRKRPLRC
Trigger: GCACCGCAATGGTCGCTTTCTCTTGTTCCAGGACCAGTGTACTGTGCCTTCAGTCAGCAGGGCAGACAGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000237888.2
ENSMUST00000237960.2
3UTR TCA 72 bp ACAAGTGAAGTTGCCCAGCAGTGTACATCCCGGGAGTaGTGGAGCAGTGTGTTCAGGTGGGTGTGGCCTTTG +
Preference number: 3 (lower is better)
Translates to: TSEVAQQCTSRE*WSSVFRWVWPL
Trigger: CAAAGGCCACACCCACCTGAACACACTGCTCCATCACTCCCGGGATGTACACTGCTGGGCAACTTCACTTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000040772.9
ENSMUST00000237888.2
ENSMUST00000237960.2
3UTR TCA 72 bp CTGGCACCTCAGGTAGATCTCACTCATGCCCTCTGGTaGGGGTACCAGGAGTTTGATGCAGAACTTCTGGCC +
Preference number: 3 (lower is better)
Translates to: LAPQVDLTHALW*GYQEFDAELLA
Trigger: GGCCAGAAGTTCTGCATCAAACTCCTGGTACCCTCACCAGAGGGCATGAGTGAGATCTACCTGAGGTGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000237960.2
3UTR-3UTR CAA 90 bp CCTACAATGGCCCTGGAACCCTTCCAGAGAGGAGTCTGGGACATGGCAGGATTACCCCGGTGCTTCATCTaGGCTCTTATAGTAGGACAG +
Preference number: 3 (lower is better)
Translates to: PTMALEPFQRGVWDMAGLPRCFI*ALIVGQ
Trigger: CTGTCCTACTATAAGAGCCAAGATGAAGCACCGGGG...TAATCCTGCCATGTCCCAGACTCCTCTCTGGAAGGGTTCCAGGGCCATTGTAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000237960.2
3UTR CCA 72 bp CCTACAATGGCCCTGGAACCCTTCCAGAGAGGAGTCTaGGACATGGCAGGATTAGGAAGGAGTGGCTATAAG +
Preference number: 3 (lower is better)
Translates to: PTMALEPFQRGV*DMAGLGRSGYK
Trigger: CTTATAGCCACTCCTTCCTAATCCTGCCATGTCCCAGACTCCTCTCTGGAAGGGTTCCAGGGCCATTGTAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000237888.2
ENSMUST00000237960.2
3UTR CCA 72 bp CAGGCAGGCCCTATACTTAACCGGAAGATCCGGAGATaGTCCTTGAGTTCTGGGATGGTAGTGAGACTATCC +
Preference number: 3 (lower is better)
Translates to: QAGPILNRKIRR*SLSSGMVVRLS
Trigger: GGATAGTCTCACTACCATCCCAGAACTCAAGGACCATCTCCGGATCTTCCGGTTAAGTATAGGGCCTGCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237960.2
3UTR CCA 72 bp ACACAGAAAGAAAGTCCAGCTTCAAACCAGGATTTGTaGTTCCTCATCCGTGTCTGGCATTCGTCGTGTGCT +
Preference number: 3 (lower is better)
Translates to: TQKESPASNQDL*FLIRVWHSSCA
Trigger: AGCACACGACGAATGCCAGACACGGATGAGGAACCACAAATCCTGGTTTGAAGCTGGACTTTCTTTCTGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000040772.9
ENSMUST00000237888.2
ENSMUST00000237960.2
3UTR-3UTR CAA 90 bp GCAGCTAGCAGACACACAGCTGAAGGCCACATTGATGTGTTCATCGAACTCAATCAGCTGAAGGCCACATaGATGTGTTCATCGAACTCA +
Preference number: 3 (lower is better)
Translates to: AASRHTAEGHIDVFIELNQLKAT*MCSSNS
Trigger: TGAGTTCGATGAACACATCAATGTGGCCTTCAGCTG...ATTGAGTTCGATGAACACATCAATGTGGCCTTCAGCTGTGTGTCTGCTAGCTGC
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000237888.2
ENSMUST00000237960.2
3UTR TCA 72 bp CTTGGGGTGAGCTGTAGGGTCATATTAGTAAGGAATTaGCAGGGCTTCCCCTTATCCAAAGTCCCTGAGATT +
Preference number: 3 (lower is better)
Translates to: LGVSCRVILVRN*QGFPLSKVPEI
Trigger: AATCTCAGGGACTTTGGATAAGGGGAAGCCCTGTCAATTCCTTACTAATATGACCCTACAGCTCACCCCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000237888.2
ENSMUST00000237960.2
CDS-3UTR CCA 90 bp CTAGGCTGGCTGGTGGTAGCACCTACCCCAGCGAGGGCCCTGGCCTGCCTGGTGAGCTGCTGTCCGCCATaGTGCGGCCCTTGGAGGCCA +
Preference number: 4 (lower is better)
Translates to: LGWLVVAPTPARALACLVSCCPP*CGPWRP
Trigger: TGGCCTCCAAGGGCCGCACCATGGCGGACAGCAGCT...CACCAGGCAGGCCAGGGCCCTCGCTGGGGTAGGTGCTACCACCAGCCAGCCTAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040772.9
ENSMUST00000237888.2
CDS-3UTR GCA 90 bp CTAGGCTGGCTGGTGGTAGCACCTACCCCAGCGAGGGCCCTGGCCTGCCTGGTGCCCTTGAGGTTGAGCTaGTGGGTAGGGTCCCCCGGT +
Preference number: 4 (lower is better)
Translates to: LGWLVVAPTPARALACLVPLRLS*WVGSPG
Trigger: ACCGGGGGACCCTACCCAGCAGCTCAACCTCAAGGG...CACCAGGCAGGCCAGGGCCCTCGCTGGGGTAGGTGCTACCACCAGCCAGCCTAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000040772.9
ENSMUST00000237888.2
CDS-3UTR GCA 90 bp TCCCTAGGCTGGCTGGTGGTAGCACCTACCCCAGCGAGGGCCCTGGCCTGCCTGAAGTCCCAGCGGGCCTaGTCATACAGCTGGGTCAGC +
Preference number: 4 (lower is better)
Translates to: SLGWLVVAPTPARALACLKSQRA*SYSWVS
Trigger: GCTGACCCAGCTGTATGAGCAGGCCCGCTGGGACTT...CAGGCAGGCCAGGGCCCTCGCTGGGGTAGGTGCTACCACCAGCCAGCCTAGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040772.9
ENSMUST00000237888.2
CDS-3UTR CCA 90 bp TCCCTAGGCTGGCTGGTGGTAGCACCTACCCCAGCGAGGGCCCTGGCCTGCCTGCACCTGCTGTGGAGCTaGGTCTTGTCAGGCAGGGAG +
Preference number: 4 (lower is better)
Translates to: SLGWLVVAPTPARALACLHLLWS*VLSGRE
Trigger: CTCCCTGCCTGACAAGACCCAGCTCCACAGCAGGTG...CAGGCAGGCCAGGGCCCTCGCTGGGGTAGGTGCTACCACCAGCCAGCCTAGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000040772.9
ENSMUST00000237888.2
ENSMUST00000237960.2
CDS-3UTR TCA 90 bp CTAGGCTGGCTGGTGGTAGCACCTACCCCAGCGAGGGCCCTGGCCTGCCTGGTGGGGGCTTCAGGACCTTaGGGTTTGTTCCCTGAGCCT +
Preference number: 4 (lower is better)
Translates to: LGWLVVAPTPARALACLVGASGP*GLFPEP
Trigger: AGGCTCAGGGAACAAACCTCAAGGTCCTGAAGCCCC...CACCAGGCAGGCCAGGGCCCTCGCTGGGGTAGGTGCTACCACCAGCCAGCCTAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000040772.9
ENSMUST00000237888.2
CDS-3UTR TCA 90 bp TCCCTAGGCTGGCTGGTGGTAGCACCTACCCCAGCGAGGGCCCTGGCCTGCCTGGCCGTATGTCCCAGTTaGCGTTCCATTGCCGCATGT +
Preference number: 4 (lower is better)
Translates to: SLGWLVVAPTPARALACLAVCPS*RSIAAC
Trigger: ACATGCGGCAATGGAACGTCAACTGGGACATACGGC...CAGGCAGGCCAGGGCCCTCGCTGGGGTAGGTGCTACCACCAGCCAGCCTAGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040772.9
CDS-3UTR GCA 90 bp CCAGCGAGGGCCCTGGCCTGCCTGGTGACAACAAGTGAAGTTGCCCAGCAGTGTCCTCGCTGGCATAGCTaGTGTCCGCCATGGTGCGGC +
Preference number: 4 (lower is better)
Translates to: PARALACLVTTSEVAQQCPRWHS*CPPWCG
Trigger: GCCGCACCATGGCGGACAGCAGCTATGCCAGCGAGG...ACACTGCTGGGCAACTTCACTTGTTGTCACCAGGCAGGCCAGGGCCCTCGCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040772.9
ENSMUST00000237888.2
CDS-3UTR CCA 90 bp CCAGCGAGGGCCCTGGCCTGCCTGGTGACAACAAGTGAAGTTGCCCAGCAGTGTGGCCTTGGCAGGCGCTaGAGCAGGAGAGGGTCAGGT +
Preference number: 4 (lower is better)
Translates to: PARALACLVTTSEVAQQCGLGRR*SRRGSG
Trigger: ACCTGACCCTCTCCTGCTCCAGCGCCTGCCAAGGCC...ACACTGCTGGGCAACTTCACTTGTTGTCACCAGGCAGGCCAGGGCCCTCGCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000040772.9
ENSMUST00000237888.2
ENSMUST00000237960.2
CDS-3UTR GCA 90 bp TCCCTAGGCTGGCTGGTGGTAGCACCTACCCCAGCGAGGGCCCTGGCCTGCCTGAGCCACTGTCTCTTCTaGTCCCACCAAATGGCATGG +
Preference number: 4 (lower is better)
Translates to: SLGWLVVAPTPARALACLSHCLF*SHQMAW
Trigger: CCATGCCATTTGGTGGGAGCAGAAGAGACAGTGGCT...CAGGCAGGCCAGGGCCCTCGCTGGGGTAGGTGCTACCACCAGCCAGCCTAGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000040772.9
ENSMUST00000237888.2
ENSMUST00000237960.2
CDS-3UTR TCA 90 bp CCCCTCGGGCCCGCTCTCGGGTGGACAGGAAGATGTAACCCCCGATGTACTCGTGGGGCTTCAGGACCTTaGGGTTTGTTCCCTGAGCCT +
Preference number: 4 (lower is better)
Translates to: PLGPALGWTGRCNPRCTRGASGP*GLFPEP
Trigger: AGGCTCAGGGAACAAACCTCAAGGTCCTGAAGCCCC...ACGAGTACATCGGGGGTTACATCTTCCTGTCCACCCGAGAGCGGGCCCGAGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000237888.2
CDS-3UTR TCA 90 bp GCTCTTCCCCTCGGGCCCGCTCTCGGGTGGACAGGAAGATGTAACCCCCGATGTGCACCTGCTTGGCCTTaGACTTTCGCTGGAACCGAG +
Preference number: 4 (lower is better)
Translates to: ALPLGPALGWTGRCNPRCAPAWP*TFAGTE
Trigger: CTCGGTTCCAGCGAAAGTTCAAGGCCAAGCAGGTGC...ACATCGGGGGTTACATCTTCCTGTCCACCCGAGAGCGGGCCCGAGGGGAAGAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000237888.2
CDS-3UTR GCA 90 bp GGGGCTCTGTGTGGCTCAGGGCCCATCATCCCTAGGCTGGCTGGTGGTAGCACCAGGATGACAGGTCGGTaGTGTGGCCCAAAGAAGAGG +
Preference number: 4 (lower is better)
Translates to: GALCGSGPIIPRLAGGSTRMTGR*CGPKKR
Trigger: CCTCTTCTTTGGGCCACAGCACCGACCTGTCATCCT...GGTGCTACCACCAGCCAGCCTAGGGATGATGGGCCCTGAGCCACACAGAGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000040772.9
ENSMUST00000237888.2
ENSMUST00000237960.2
CDS-3UTR CCA 90 bp CCAGCAGTGTACATCCCGGGAGTGATGGAGCAGTGTGTTCAGGTGGGTGTGGCCCGGAGTGTGACAGACTaGGCCTCAGGGTCCTCCTCG +
Preference number: 4 (lower is better)
Translates to: PAVYIPGVMEQCVQVGVARSVTD*ASGSSS
Trigger: CGAGGAGGACCCTGAGGCCCAGTCTGTCACACTCCG...GGCCACACCCACCTGAACACACTGCTCCATCACTCCCGGGATGTACACTGCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000040772.9
ENSMUST00000237888.2
ENSMUST00000237960.2
CDS-3UTR CCA 90 bp AGGGGCTGCCCTCAGAAGGCCTCATGGCCTCCTGTAAGCTGCAGGAACAGATCCCGGAGTGTGACAGACTaGGCCTCAGGGTCCTCCTCG +
Preference number: 4 (lower is better)
Translates to: RGCPQKASWPPVSCRNRSRSVTD*ASGSSS
Trigger: CGAGGAGGACCCTGAGGCCCAGTCTGTCACACTCCG...GGATCTGTTCCTGCAGCTTACAGGAGGCCATGAGGCCTTCTGAGGGCAGCCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000237888.2
ENSMUST00000237960.2
CDS-3UTR CCA 90 bp TCGGGTGGACAGGAAGATGTAACCCCCGATGTACTCGTGCACGATGCGGCAGCTAGCTGCTGTCCGCCATaGTGCGGCCCTTGGAGGCCA +
Preference number: 4 (lower is better)
Translates to: SGGQEDVTPDVLVHDAAASCCPP*CGPWRP
Trigger: TGGCCTCCAAGGGCCGCACCATGGCGGACAGCAGCT...AGCTGCCGCATCGTGCACGAGTACATCGGGGGTTACATCTTCCTGTCCACCCGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000237888.2
CDS-3UTR CCA 90 bp GCCCTGGCCTGCCTGGTGACAACAAGTGAAGTTGCCCAGCAGTGTACATCCCGGTGGCCTGCACCTCGCTaGCATAGCTGCTGTCCGCCA +
Preference number: 4 (lower is better)
Translates to: ALACLVTTSEVAQQCTSRWPAPR*HSCCPP
Trigger: TGGCGGACAGCAGCTATGCCAGCGAGGTGCAGGCCA...CCGGGATGTACACTGCTGGGCAACTTCACTTGTTGTCACCAGGCAGGCCAGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040772.9
ENSMUST00000237888.2
CDS-3UTR GCA 90 bp CCCCTCGGGCCCGCTCTCGGGTGGACAGGAAGATGTAACCCCCGATGTACTCGTCCGGCCTTGATACCTTaGTGCATGAGGCACCGAGAT +
Preference number: 4 (lower is better)
Translates to: PLGPALGWTGRCNPRCTRPALIP*CMRHRD
Trigger: ATCTCGGTGCCTCATGCAGCAAGGTATCAAGGCCGG...ACGAGTACATCGGGGGTTACATCTTCCTGTCCACCCGAGAGCGGGCCCGAGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000237888.2
ENSMUST00000237960.2
CDS-3UTR GCA 90 bp AGGGGCTGCCCTCAGAAGGCCTCATGGCCTCCTGTAAGCTGCAGGAACAGATCCAAGTCCCAGCGGGCCTaGTCATACAGCTGGGTCAGC +
Preference number: 4 (lower is better)
Translates to: RGCPQKASWPPVSCRNRSKSQRA*SYSWVS
Trigger: GCTGACCCAGCTGTATGAGCAGGCCCGCTGGGACTT...GGATCTGTTCCTGCAGCTTACAGGAGGCCATGAGGCCTTCTGAGGGCAGCCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000237888.2
CDS-3UTR GCA 90 bp ATCATCCCTAGGCTGGCTGGTGGTAGCACCTACCCCAGCGAGGGCCCTGGCCTGCAGTTGACGTTCCATTaGCGCATGTTGCTGAAGCGC +
Preference number: 4 (lower is better)
Translates to: IIPRLAGGSTYPSEGPGLQLTFH*RMLLKR
Trigger: GCGCTTCAGCAACATGCGGCAATGGAACGTCAACTG...CAGGCCAGGGCCCTCGCTGGGGTAGGTGCTACCACCAGCCAGCCTAGGGATGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040772.9
CDS-3UTR CCA 90 bp GCTCTTCCCCTCGGGCCCGCTCTCGGGTGGACAGGAAGATGTAACCCCCGATGTTTTGGAAGAGGGGCTTaGAGAAACTGGCCCGAAGCC +
Preference number: 4 (lower is better)
Translates to: ALPLGPALGWTGRCNPRCFGRGA*RNWPEA
Trigger: GGCTTCGGGCCAGTTTCTCCAAGCCCCTCTTCCAAA...ACATCGGGGGTTACATCTTCCTGTCCACCCGAGAGCGGGCCCGAGGGGAAGAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000237888.2
ENSMUST00000237960.2
CDS-3UTR CCA 90 bp GTGCTTAGGGACTACATAGAGGTCGGGGGTGTGAGCTTCTGCCAACAGGGTGAGTGTCAGGCAGGGAGCTaGGCCTTGGCAGGCGCTGGA +
Preference number: 4 (lower is better)
Translates to: VLRDYIEVGGVSFCQQGECQAGS*ALAGAG
Trigger: TCCAGCGCCTGCCAAGGCCCAGCTCCCTGCCTGACA...CTCACCCTGTTGGCAGAAGCTCACACCCCCGACCTCTATGTAGTCCCTAAGCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000040772.9
ENSMUST00000237888.2
ENSMUST00000237960.2
CDS-3UTR CCA 90 bp GTAGCACCTACCCCAGCGAGGGCCCTGGCCTGCCTGGTGACAACAAGTGAAGTTGCCTGCTCATACAGCTaGGTCAGCCGCACAGGGTCT +
Preference number: 4 (lower is better)
Translates to: VAPTPARALACLVTTSEVACSYS*VSRTGS
Trigger: AGACCCTGTGCGGCTGACCCAGCTGTATGAGCAGGC...AACTTCACTTGTTGTCACCAGGCAGGCCAGGGCCCTCGCTGGGGTAGGTGCTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040772.9
ENSMUST00000237888.2
CDS-3UTR CCA 90 bp CCAGCGAGGGCCCTGGCCTGCCTGGTGACAACAAGTGAAGTTGCCCAGCAGTGTGCCTTGAACTTTCGCTaGAACCGAGGAGCCACGAGG +
Preference number: 4 (lower is better)
Translates to: PARALACLVTTSEVAQQCALNFR*NRGATR
Trigger: CCTCGTGGCTCCTCGGTTCCAGCGAAAGTTCAAGGC...ACACTGCTGGGCAACTTCACTTGTTGTCACCAGGCAGGCCAGGGCCCTCGCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040772.9
ENSMUST00000237888.2
CDS-3UTR GCA 90 bp GTGTACATCCCGGGAGTGATGGAGCAGTGTGTTCAGGTGGGTGTGGCCTTTGGGAGTACCCCACCAATGTaGGACTCCCCCGTGACTCGG +
Preference number: 4 (lower is better)
Translates to: VYIPGVMEQCVQVGVAFGSTPPM*DSPVTR
Trigger: CCGAGTCACGGGGGAGTCGCACATTGGTGGGGTACT...CCCAAAGGCCACACCCACCTGAACACACTGCTCCATCACTCCCGGGATGTACAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000040772.9
ENSMUST00000237888.2
ENSMUST00000237960.2
CDS-3UTR GCA 90 bp CTGGTGGTAGCACCTACCCCAGCGAGGGCCCTGGCCTGCCTGGTGACAACAAGTATGAATCCAGCCACCTaGTGTGGAGCTGGGTCTTGT +
Preference number: 4 (lower is better)
Translates to: LVVAPTPARALACLVTTSMNPAT*CGAGSC
Trigger: ACAAGACCCAGCTCCACAGCAGGTGGCTGGATTCAT...ACTTGTTGTCACCAGGCAGGCCAGGGCCCTCGCTGGGGTAGGTGCTACCACCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000040772.9
ENSMUST00000237888.2
ENSMUST00000237960.2
CDS-3UTR GCA 90 bp CCAGCGAGGGCCCTGGCCTGCCTGGTGACAACAAGTGAAGTTGCCCAGCAGTGTGGCAGCCATCCACTGTaGGTACTGCTGTTCATCCTG +
Preference number: 4 (lower is better)
Translates to: PARALACLVTTSEVAQQCGSHPL*VLLFIL
Trigger: CAGGATGAACAGCAGTACGCACAGTGGATGGCTGCC...ACACTGCTGGGCAACTTCACTTGTTGTCACCAGGCAGGCCAGGGCCCTCGCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040772.9
CDS-3UTR CCA 90 bp CCCTCAGAAGGCCTCATGGCCTCCTGTAAGCTGCAGGAACAGATCCTCATCCAGGACAGGTCGGTGCTGTaGCCCAAAGAAGAGGCGGGC +
Preference number: 4 (lower is better)
Translates to: PSEGLMASCKLQEQILIQDRSVL*PKEEAG
Trigger: GCCCGCCTCTTCTTTGGGCCACAGCACCGACCTGTC...CTGGATGAGGATCTGTTCCTGCAGCTTACAGGAGGCCATGAGGCCTTCTGAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000237888.2
ENSMUST00000237960.2
CDS-3UTR CCA 90 bp ATCGGGTCCTACAATGGCCCTGGAACCCTTCCAGAGAGGAGTCTGGGACATGGCCACCTGCTGTGGAGCTaGGTCTTGTCAGGCAGGGAG +
Preference number: 4 (lower is better)
Translates to: IGSYNGPGTLPERSLGHGHLLWS*VLSGRE
Trigger: CTCCCTGCCTGACAAGACCCAGCTCCACAGCAGGTG...GCCATGTCCCAGACTCCTCTCTGGAAGGGTTCCAGGGCCATTGTAGGACCCGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000237888.2
ENSMUST00000237960.2
CDS-3UTR CCA 90 bp GACGTTCCATTGCCGCATGTTGCTGAAGCGCCAGGTCTTGACCACGTCACCCACTTGAGGTTGAGCTGCTaGGTAGGGTCCCCCGGTGCT +
Preference number: 4 (lower is better)
Translates to: DVPLPHVAEAPGLDHVTHLRLSC*VGSPGA
Trigger: AGCACCGGGGGACCCTACCCAGCAGCTCAACCTCAA...GTGGGTGACGTGGTCAAGACCTGGCGCTTCAGCAACATGCGGCAATGGAACGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000237888.2
CDS-3UTR CCA 90 bp AAGTTGCCCAGCAGTGTACATCCCGGGAGTGATGGAGCAGTGTGTTCAGGTGGGTGGCCTGCACCTCGCTaGCATAGCTGCTGTCCGCCA +
Preference number: 4 (lower is better)
Translates to: KLPSSVHPGSDGAVCSGGWPAPR*HSCCPP
Trigger: TGGCGGACAGCAGCTATGCCAGCGAGGTGCAGGCCA...CCCACCTGAACACACTGCTCCATCACTCCCGGGATGTACACTGCTGGGCAACTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040772.9
ENSMUST00000237888.2
3UTR CAA 72 bp TCTGAGGGTGCTGACCCCTTCAGCTTCACCTCCAGGTaGTTCAGGGCTGCATCCAGGTCATCCAGTCCCAGG +
Preference number: 4 (lower is better)
Translates to: SEGADPFSFTSR*FRAASRSSSPR
Trigger: CCTGGGACTGGATGACCTGGATGCAGCCCTGAACAACCTGGAGGTGAAGCTGAAGGGGTCAGCACCCTCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000237960.2
CDS-3UTR CCA 90 bp GCAGTGTACATCCCGGGAGTGATGGAGCAGTGTGTTCAGGTGGGTGTGGCCTTTCACCTGCTGTGGAGCTaGGTCTTGTCAGGCAGGGAG +
Preference number: 4 (lower is better)
Translates to: AVYIPGVMEQCVQVGVAFHLLWS*VLSGRE
Trigger: CTCCCTGCCTGACAAGACCCAGCTCCACAGCAGGTG...AAAGGCCACACCCACCTGAACACACTGCTCCATCACTCCCGGGATGTACACTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000040772.9
ENSMUST00000237888.2
ENSMUST00000237960.2
CDS-3UTR CCA 90 bp CGTGTGCTTAGGGACTACATAGAGGTCGGGGGTGTGAGCTTCTGCCAACAGGGTGCCTGCTCATACAGCTaGGTCAGCCGCACAGGGTCT +
Preference number: 4 (lower is better)
Translates to: RVLRDYIEVGGVSFCQQGACSYS*VSRTGS
Trigger: AGACCCTGTGCGGCTGACCCAGCTGTATGAGCAGGC...ACCCTGTTGGCAGAAGCTCACACCCCCGACCTCTATGTAGTCCCTAAGCACACG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000040772.9
ENSMUST00000237888.2
CDS-3UTR CCA 90 bp AGTTGCCCAGCAGTGTACATCCCGGGAGTGATGGAGCAGTGTGTTCAGGTGGGTTTGAGGTTGAGCTGCTaGGTAGGGTCCCCCGGTGCT +
Preference number: 4 (lower is better)
Translates to: SCPAVYIPGVMEQCVQVGLRLSC*VGSPGA
Trigger: AGCACCGGGGGACCCTACCCAGCAGCTCAACCTCAA...ACCCACCTGAACACACTGCTCCATCACTCCCGGGATGTACACTGCTGGGCAACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000040772.9
ENSMUST00000237888.2
CDS-3UTR GCA 90 bp CCAGCAGTGTACATCCCGGGAGTGATGGAGCAGTGTGTTCAGGTGGGTGTGGCCAGCCACTGTCTCTTCTaGTCCCACCAAATGGCATGG +
Preference number: 4 (lower is better)
Translates to: PAVYIPGVMEQCVQVGVASHCLF*SHQMAW
Trigger: CCATGCCATTTGGTGGGAGCAGAAGAGACAGTGGCT...GGCCACACCCACCTGAACACACTGCTCCATCACTCCCGGGATGTACACTGCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000040772.9
ENSMUST00000237888.2
ENSMUST00000237960.2
CDS-3UTR GCA 90 bp TTGCTGAAGCGCCAGGTCTTGACCACGTCACCCACGGCCAGATCAATCCGGATGAGGATGACAGGTCGGTaGTGTGGCCCAAAGAAGAGG +
Preference number: 4 (lower is better)
Translates to: LLKRQVLTTSPTARSIRMRMTGR*CGPKKR
Trigger: CCTCTTCTTTGGGCCACAGCACCGACCTGTCATCCT...CATCCGGATTGATCTGGCCGTGGGTGACGTGGTCAAGACCTGGCGCTTCAGCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000237888.2
ENSMUST00000237960.2
CDS-3UTR GCA 90 bp GTGTACATCCCGGGAGTGATGGAGCAGTGTGTTCAGGTGGGTGTGGCCTTTGGGCCGGCCTTGATACCTTaGTGCATGAGGCACCGAGAT +
Preference number: 4 (lower is better)
Translates to: VYIPGVMEQCVQVGVAFGPALIP*CMRHRD
Trigger: ATCTCGGTGCCTCATGCAGCAAGGTATCAAGGCCGG...CCCAAAGGCCACACCCACCTGAACACACTGCTCCATCACTCCCGGGATGTACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000040772.9
ENSMUST00000237888.2
ENSMUST00000237960.2
CDS-3UTR GCA 90 bp GCCCTGGCCTGCCTGGTGACAACAAGTGAAGTTGCCCAGCAGTGTACATCCCGGATCCACTGTGCGTACTaGTGTTCATCCTGGCACCTC +
Preference number: 4 (lower is better)
Translates to: ALACLVTTSEVAQQCTSRIHCAY*CSSWHL
Trigger: GAGGTGCCAGGATGAACAGCAGTACGCACAGTGGAT...CCGGGATGTACACTGCTGGGCAACTTCACTTGTTGTCACCAGGCAGGCCAGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040772.9
CDS-3UTR CCA 90 bp TTTGATGCAGAACTTCTGGCCAGAGACATTGACATCAGGGACCACCTCACAGCCGGCCTTGGCAGGCGCTaGAGCAGGAGAGGGTCAGGT +
Preference number: 4 (lower is better)
Translates to: FDAELLARDIDIRDHLTAGLGRR*SRRGSG
Trigger: ACCTGACCCTCTCCTGCTCCAGCGCCTGCCAAGGCC...GGCTGTGAGGTGGTCCCTGATGTCAATGTCTCTGGCCAGAAGTTCTGCATCAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237960.2
3UTR CAA 72 bp ACGTTCCATTGCCGCATGTTGCTGAAGCGCCAGGTCTaGACCACGTCACCCACGGCCAGATCAATCCGGATG +
Preference number: 4 (lower is better)
Translates to: TFHCRMLLKRQV*TTSPTARSIRM
Trigger: CATCCGGATTGATCTGGCCGTGGGTGACGTGGTCAAGACCTGGCGCTTCAGCAACATGCGGCAATGGAACGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000237888.2
ENSMUST00000237960.2
CDS-3UTR TCA 90 bp CATGTTGCTGAAGCGCCAGGTCTTGACCACGTCACCCACGGCCAGATCAATCCGTCAGGGTCAGTTTGTTaGTGTGGTACTGCAGGGCAG +
Preference number: 4 (lower is better)
Translates to: HVAEAPGLDHVTHGQINPSGSVC*CGTAGQ
Trigger: CTGCCCTGCAGTACCACATCAACAAACTGACCCTGA...CGGATTGATCTGGCCGTGGGTGACGTGGTCAAGACCTGGCGCTTCAGCAACATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237888.2
CDS-3UTR GCA 90 bp CCCTCAGAAGGCCTCATGGCCTCCTGTAAGCTGCAGGAACAGATCCTCATCCAGCAGGTTGTTCAGGGCTaGATCCAGGTCATCCAGTCC +
Preference number: 4 (lower is better)
Translates to: PSEGLMASCKLQEQILIQQVVQG*IQVIQS
Trigger: GGACTGGATGACCTGGATGCAGCCCTGAACAACCTG...CTGGATGAGGATCTGTTCCTGCAGCTTACAGGAGGCCATGAGGCCTTCTGAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237888.2
CDS-3UTR TCA 90 bp AGTTGCCCAGCAGTGTACATCCCGGGAGTGATGGAGCAGTGTGTTCAGGTGGGTTCAGGGTCAGTTTGTTaGTGTGGTACTGCAGGGCAG +
Preference number: 4 (lower is better)
Translates to: SCPAVYIPGVMEQCVQVGSGSVC*CGTAGQ
Trigger: CTGCCCTGCAGTACCACATCAACAAACTGACCCTGA...ACCCACCTGAACACACTGCTCCATCACTCCCGGGATGTACACTGCTGGGCAACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040772.9
ENSMUST00000237888.2
CDS-3UTR TCA 90 bp AAGTTGCCCAGCAGTGTACATCCCGGGAGTGATGGAGCAGTGTGTTCAGGTGGGAGGGTACCAGGAGTTTaGTGCAGAACTTCTGGCCAG +
Preference number: 4 (lower is better)
Translates to: KLPSSVHPGSDGAVCSGGRVPGV*CRTSGQ
Trigger: CTGGCCAGAAGTTCTGCATCAAACTCCTGGTACCCT...CCCACCTGAACACACTGCTCCATCACTCCCGGGATGTACACTGCTGGGCAACTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040772.9
ENSMUST00000237888.2
CDS-3UTR TCA 90 bp AGTTGCCCAGCAGTGTACATCCCGGGAGTGATGGAGCAGTGTGTTCAGGTGGGTAGGGTACCAGGAGTTTaGTGCAGAACTTCTGGCCAG +
Preference number: 4 (lower is better)
Translates to: SCPAVYIPGVMEQCVQVGRVPGV*CRTSGQ
Trigger: CTGGCCAGAAGTTCTGCATCAAACTCCTGGTACCCT...ACCCACCTGAACACACTGCTCCATCACTCCCGGGATGTACACTGCTGGGCAACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040772.9
ENSMUST00000237888.2
CDS-3UTR GCA 90 bp TCCTACAATGGCCCTGGAACCCTTCCAGAGAGGAGTCTGGGACATGGCAGGATTAGGATGACAGGTCGGTaGTGTGGCCCAAAGAAGAGG +
Preference number: 4 (lower is better)
Translates to: SYNGPGTLPERSLGHGRIRMTGR*CGPKKR
Trigger: CCTCTTCTTTGGGCCACAGCACCGACCTGTCATCCT...AATCCTGCCATGTCCCAGACTCCTCTCTGGAAGGGTTCCAGGGCCATTGTAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000237888.2
ENSMUST00000237960.2
CDS-3UTR GCA 90 bp AATCGGGTCCTACAATGGCCCTGGAACCCTTCCAGAGAGGAGTCTGGGACATGGATGAATCCAGCCACCTaGTGTGGAGCTGGGTCTTGT +
Preference number: 4 (lower is better)
Translates to: NRVLQWPWNPSREESGTWMNPAT*CGAGSC
Trigger: ACAAGACCCAGCTCCACAGCAGGTGGCTGGATTCAT...CCATGTCCCAGACTCCTCTCTGGAAGGGTTCCAGGGCCATTGTAGGACCCGATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000237888.2
ENSMUST00000237960.2
CDS-3UTR GCA 90 bp GTAGCACCTACCCCAGCGAGGGCCCTGGCCTGCCTGGTGACAACAAGTGAAGTTTTGTTGATGTGGTACTaGAGGGCAGCAAACACCATC +
Preference number: 4 (lower is better)
Translates to: VAPTPARALACLVTTSEVLLMWY*RAANTI
Trigger: GATGGTGTTTGCTGCCCTGCAGTACCACATCAACAA...AACTTCACTTGTTGTCACCAGGCAGGCCAGGGCCCTCGCTGGGGTAGGTGCTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000040772.9
ENSMUST00000237888.2
CDS-3UTR GCA 90 bp ATGAGTCGGTTGTTGGCAATGCCTAGGATCTCATCTTTCCTGCTGCCCTTGAACCCCTTGAGGTTGAGCTaGTGGGTAGGGTCCCCCGGT +
Preference number: 4 (lower is better)
Translates to: MSRLLAMPRISSFLLPLNPLRLS*WVGSPG
Trigger: ACCGGGGGACCCTACCCAGCAGCTCAACCTCAAGGG...GTTCAAGGGCAGCAGGAAAGATGAGATCCTAGGCATTGCCAACAACCGACTCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000237888.2
CDS-3UTR GCA 90 bp GCCCTGGCCTGCCTGGTGACAACAAGTGAAGTTGCCCAGCAGTGTACATCCCGGCCATCACATAGGAGATaGCAAAGTCGGGCAAGGATT +
Preference number: 4 (lower is better)
Translates to: ALACLVTTSEVAQQCTSRPSHRR*QSRARI
Trigger: AATCCTTGCCCGACTTTGGCATCTCCTATGTGATGG...CCGGGATGTACACTGCTGGGCAACTTCACTTGTTGTCACCAGGCAGGCCAGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040772.9
CDS-3UTR CCA 90 bp AAGTTGCCCAGCAGTGTACATCCCGGGAGTGATGGAGCAGTGTGTTCAGGTGGGTCCCACCAAATGGCATaGTCAGACCAGTCCTGCTTG +
Preference number: 4 (lower is better)
Translates to: KLPSSVHPGSDGAVCSGGSHQMA*SDQSCL
Trigger: CAAGCAGGACTGGTCTGACCATGCCATTTGGTGGGA...CCCACCTGAACACACTGCTCCATCACTCCCGGGATGTACACTGCTGGGCAACTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000040772.9
ENSMUST00000237888.2
ENSMUST00000237960.2
CDS-3UTR CCA 90 bp AGAAAGAAAGTCCAGCTTCAAACCAGGATTTGTGGTTCCTCATCCGTGTCTGGCGGCCTTGGCAGGCGCTaGAGCAGGAGAGGGTCAGGT +
Preference number: 4 (lower is better)
Translates to: RKKVQLQTRICGSSSVSGGLGRR*SRRGSG
Trigger: ACCTGACCCTCTCCTGCTCCAGCGCCTGCCAAGGCC...GCCAGACACGGATGAGGAACCACAAATCCTGGTTTGAAGCTGGACTTTCTTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000040772.9
ENSMUST00000237888.2
ENSMUST00000237960.2
CDS-3UTR CCA 90 bp GTGGTAGCACCTACCCCAGCGAGGGCCCTGGCCTGCCTGGTGACAACAAGTGAAATGGTCCTTGAGTTCTaGGATGGTAGTGAGACTATC +
Preference number: 4 (lower is better)
Translates to: VVAPTPARALACLVTTSEMVLEF*DGSETI
Trigger: GATAGTCTCACTACCATCCCAGAACTCAAGGACCAT...TTCACTTGTTGTCACCAGGCAGGCCAGGGCCCTCGCTGGGGTAGGTGCTACCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040772.9
ENSMUST00000237888.2
3UTR CAA 72 bp TCACCCACGGCCAGATCAATCCGGATGAGTCGGTTGTaGGCAATGCCTAGGATCTCATCTTTCCTGCTGCCC +
Preference number: 4 (lower is better)
Translates to: SPTARSIRMSRL*AMPRISSFLLP
Trigger: GGGCAGCAGGAAAGATGAGATCCTAGGCATTGCCAACAACCGACTCATCCGGATTGATCTGGCCGTGGGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000237888.2
ENSMUST00000237960.2
CDS-3UTR GCA 90 bp GTGTACATCCCGGGAGTGATGGAGCAGTGTGTTCAGGTGGGTGTGGCCTTTGGGTTGTTGATGTGGTACTaGAGGGCAGCAAACACCATC +
Preference number: 4 (lower is better)
Translates to: VYIPGVMEQCVQVGVAFGLLMWY*RAANTI
Trigger: GATGGTGTTTGCTGCCCTGCAGTACCACATCAACAA...CCCAAAGGCCACACCCACCTGAACACACTGCTCCATCACTCCCGGGATGTACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040772.9
ENSMUST00000237888.2
CDS-3UTR GCA 90 bp ACACAGAAAGAAAGTCCAGCTTCAAACCAGGATTTGTGGTTCCTCATCCGTGTCCCTCGCTGGCATAGCTaGTGTCCGCCATGGTGCGGC +
Preference number: 4 (lower is better)
Translates to: TQKESPASNQDLWFLIRVPRWHS*CPPWCG
Trigger: GCCGCACCATGGCGGACAGCAGCTATGCCAGCGAGG...GACACGGATGAGGAACCACAAATCCTGGTTTGAAGCTGGACTTTCTTTCTGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040772.9
ENSMUST00000237888.2
CDS-3UTR GCA 90 bp AGAAAGAAAGTCCAGCTTCAAACCAGGATTTGTGGTTCCTCATCCGTGTCTGGCCTACCACCTGCCCGCTaGAGGCTGAGGAAGGCCAGA +
Preference number: 4 (lower is better)
Translates to: RKKVQLQTRICGSSSVSGLPPAR*RLRKAR
Trigger: TCTGGCCTTCCTCAGCCTGCAGCGGGCAGGTGGTAG...GCCAGACACGGATGAGGAACCACAAATCCTGGTTTGAAGCTGGACTTTCTTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040772.9
ENSMUST00000237888.2
CDS-3UTR CCA 90 bp CAGACACAGAAAGAAAGTCCAGCTTCAAACCAGGATTTGTGGTTCCTCATCCGTTGTCAGGCAGGGAGCTaGGCCTTGGCAGGCGCTGGA +
Preference number: 4 (lower is better)
Translates to: QTQKESPASNQDLWFLIRCQAGS*ALAGAG
Trigger: TCCAGCGCCTGCCAAGGCCCAGCTCCCTGCCTGACA...ACGGATGAGGAACCACAAATCCTGGTTTGAAGCTGGACTTTCTTTCTGTGTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000040772.9
ENSMUST00000237888.2
ENSMUST00000237960.2
CDS-3UTR CCA 90 bp AAAGAAAGTCCAGCTTCAAACCAGGATTTGTGGTTCCTCATCCGTGTCTGGCATTGTCAGGCAGGGAGCTaGGCCTTGGCAGGCGCTGGA +
Preference number: 4 (lower is better)
Translates to: KESPASNQDLWFLIRVWHCQAGS*ALAGAG
Trigger: TCCAGCGCCTGCCAAGGCCCAGCTCCCTGCCTGACA...ATGCCAGACACGGATGAGGAACCACAAATCCTGGTTTGAAGCTGGACTTTCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000040772.9
ENSMUST00000237888.2
ENSMUST00000237960.2
3UTR CAA 72 bp ACGTCACCCACGGCCAGATCAATCCGGATGAGTCGGTaGTTGGCAATGCCTAGGATCTCATCTTTCCTGCTG +
Preference number: 4 (lower is better)
Translates to: TSPTARSIRMSR*LAMPRISSFLL
Trigger: CAGCAGGAAAGATGAGATCCTAGGCATTGCCAACAACCGACTCATCCGGATTGATCTGGCCGTGGGTGACGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000237888.2
ENSMUST00000237960.2
CDS-3UTR GCA 90 bp ACACAGAAAGAAAGTCCAGCTTCAAACCAGGATTTGTGGTTCCTCATCCGTGTCCTACCACCTGCCCGCTaGAGGCTGAGGAAGGCCAGA +
Preference number: 4 (lower is better)
Translates to: TQKESPASNQDLWFLIRVLPPAR*RLRKAR
Trigger: TCTGGCCTTCCTCAGCCTGCAGCGGGCAGGTGGTAG...GACACGGATGAGGAACCACAAATCCTGGTTTGAAGCTGGACTTTCTTTCTGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040772.9
ENSMUST00000237888.2
CDS-3UTR CCA 90 bp AAAGAAAGTCCAGCTTCAAACCAGGATTTGTGGTTCCTCATCCGTGTCTGGCATCGGAGTGTGACAGACTaGGCCTCAGGGTCCTCCTCG +
Preference number: 4 (lower is better)
Translates to: KESPASNQDLWFLIRVWHRSVTD*ASGSSS
Trigger: CGAGGAGGACCCTGAGGCCCAGTCTGTCACACTCCG...ATGCCAGACACGGATGAGGAACCACAAATCCTGGTTTGAAGCTGGACTTTCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000040772.9
ENSMUST00000237888.2
ENSMUST00000237960.2
CDS-3UTR CCA 90 bp CACAGAAAGAAAGTCCAGCTTCAAACCAGGATTTGTGGTTCCTCATCCGTGTCTGACAGGTCGGTGCTGTaGCCCAAAGAAGAGGCGGGC +
Preference number: 4 (lower is better)
Translates to: HRKKVQLQTRICGSSSVSDRSVL*PKEEAG
Trigger: GCCCGCCTCTTCTTTGGGCCACAGCACCGACCTGTC...AGACACGGATGAGGAACCACAAATCCTGGTTTGAAGCTGGACTTTCTTTCTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000040772.9
ENSMUST00000237888.2
ENSMUST00000237960.2
CDS-3UTR GCA 90 bp CACAGAAAGAAAGTCCAGCTTCAAACCAGGATTTGTGGTTCCTCATCCGTGTCTAGTACCCCACCAATGTaGGACTCCCCCGTGACTCGG +
Preference number: 4 (lower is better)
Translates to: HRKKVQLQTRICGSSSVSSTPPM*DSPVTR
Trigger: CCGAGTCACGGGGGAGTCGCACATTGGTGGGGTACT...AGACACGGATGAGGAACCACAAATCCTGGTTTGAAGCTGGACTTTCTTTCTGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000040772.9
ENSMUST00000237888.2
ENSMUST00000237960.2
CDS-3UTR GCA 90 bp CAGACACAGAAAGAAAGTCCAGCTTCAAACCAGGATTTGTGGTTCCTCATCCGTAGTACCCCACCAATGTaGGACTCCCCCGTGACTCGG +
Preference number: 4 (lower is better)
Translates to: QTQKESPASNQDLWFLIRSTPPM*DSPVTR
Trigger: CCGAGTCACGGGGGAGTCGCACATTGGTGGGGTACT...ACGGATGAGGAACCACAAATCCTGGTTTGAAGCTGGACTTTCTTTCTGTGTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000040772.9
ENSMUST00000237888.2
ENSMUST00000237960.2
CDS-3UTR CCA 90 bp ACAGCTGAAGGCCACATTGATGTGTTCATCGAACTCAATGGCCACCTGCCGTATTTTGGAAGAGGGGCTTaGAGAAACTGGCCCGAAGCC +
Preference number: 4 (lower is better)
Translates to: TAEGHIDVFIELNGHLPYFGRGA*RNWPEA
Trigger: GGCTTCGGGCCAGTTTCTCCAAGCCCCTCTTCCAAA...ATACGGCAGGTGGCCATTGAGTTCGATGAACACATCAATGTGGCCTTCAGCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000237888.2
ENSMUST00000237960.2
CDS-3UTR GCA 90 bp GCAGCTAGCAGACACACAGCTGAAGGCCACATTGATGTGTTCATCGAACTCAATCCGGCCTTGATACCTTaGTGCATGAGGCACCGAGAT +
Preference number: 4 (lower is better)
Translates to: AASRHTAEGHIDVFIELNPALIP*CMRHRD
Trigger: ATCTCGGTGCCTCATGCAGCAAGGTATCAAGGCCGG...ATTGAGTTCGATGAACACATCAATGTGGCCTTCAGCTGTGTGTCTGCTAGCTGC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000237888.2
ENSMUST00000237960.2
CDS-3UTR GCA 90 bp AGAAAGAAAGTCCAGCTTCAAACCAGGATTTGTGGTTCCTCATCCGTGTCTGGCCAGGTTGTTCAGGGCTaGATCCAGGTCATCCAGTCC +
Preference number: 4 (lower is better)
Translates to: RKKVQLQTRICGSSSVSGQVVQG*IQVIQS
Trigger: GGACTGGATGACCTGGATGCAGCCCTGAACAACCTG...GCCAGACACGGATGAGGAACCACAAATCCTGGTTTGAAGCTGGACTTTCTTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040772.9
ENSMUST00000237888.2
CDS-3UTR GCA 90 bp AGAAAGAAAGTCCAGCTTCAAACCAGGATTTGTGGTTCCTCATCCGTGTCTGGCAAGTCGGGCAAGGATTaGCAGGCCTGGATAAAGCGC +
Preference number: 4 (lower is better)
Translates to: RKKVQLQTRICGSSSVSGKSGKD*QAWIKR
Trigger: GCGCTTTATCCAGGCCTGGCAATCCTTGCCCGACTT...GCCAGACACGGATGAGGAACCACAAATCCTGGTTTGAAGCTGGACTTTCTTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040772.9
CDS-3UTR GCA 90 bp ACACAGAAAGAAAGTCCAGCTTCAAACCAGGATTTGTGGTTCCTCATCCGTGTCGGCAGCCATCCACTGTaGGTACTGCTGTTCCTCAGG +
Preference number: 4 (lower is better)
Translates to: TQKESPASNQDLWFLIRVGSHPL*VLLFLR
Trigger: CCTGAGGAACAGCAGTACGCACAGTGGATGGCTGCC...GACACGGATGAGGAACCACAAATCCTGGTTTGAAGCTGGACTTTCTTTCTGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237888.2
CDS-3UTR CCA 90 bp ACACAGAAAGAAAGTCCAGCTTCAAACCAGGATTTGTGGTTCCTCATCCGTGTCGCCTTGAACTTTCGCTaGAACCGAGGAGCCACGAGG +
Preference number: 4 (lower is better)
Translates to: TQKESPASNQDLWFLIRVALNFR*NRGATR
Trigger: CCTCGTGGCTCCTCGGTTCCAGCGAAAGTTCAAGGC...GACACGGATGAGGAACCACAAATCCTGGTTTGAAGCTGGACTTTCTTTCTGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040772.9
ENSMUST00000237888.2
CDS-3UTR CCA 90 bp CACAGAAAGAAAGTCCAGCTTCAAACCAGGATTTGTGGTTCCTCATCCGTGTCTAAGGATTGCCAGGCCTaGATAAAGCGCAGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: HRKKVQLQTRICGSSSVSKDCQA*IKRSWA
Trigger: GGCCCAGCTGCGCTTTATCCAGGCCTGGCAATCCTT...AGACACGGATGAGGAACCACAAATCCTGGTTTGAAGCTGGACTTTCTTTCTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040772.9
CDS-3UTR GCA 90 bp TGGGACATGGCAGGATTAGGAAGGAGTGGCTATAAGGATTCCCTAAGGAAGAGTATGAATCCAGCCACCTaGTGTGGAGCTGGGTCTTGT +
Preference number: 4 (lower is better)
Translates to: WDMAGLGRSGYKDSLRKSMNPAT*CGAGSC
Trigger: ACAAGACCCAGCTCCACAGCAGGTGGCTGGATTCAT...ACTCTTCCTTAGGGAATCCTTATAGCCACTCCTTCCTAATCCTGCCATGTCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000237888.2
ENSMUST00000237960.2
CDS-3UTR CCA 90 bp CAGACACAGAAAGAAAGTCCAGCTTCAAACCAGGATTTGTGGTTCCTCATCCGTTTTGGAAGAGGGGCTTaGAGAAACTGGCCCGAAGCC +
Preference number: 4 (lower is better)
Translates to: QTQKESPASNQDLWFLIRFGRGA*RNWPEA
Trigger: GGCTTCGGGCCAGTTTCTCCAAGCCCCTCTTCCAAA...ACGGATGAGGAACCACAAATCCTGGTTTGAAGCTGGACTTTCTTTCTGTGTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000040772.9
ENSMUST00000237888.2
ENSMUST00000237960.2
3UTR CAA 72 bp CAGACACAGAAAGAAAGTCCAGCTTCAAACCAGGATTaGTGGTTCCTCATCCGTGTCTGGCATTCGTCGTGT +
Preference number: 4 (lower is better)
Translates to: QTQKESPASNQD*WFLIRVWHSSC
Trigger: ACACGACGAATGCCAGACACGGATGAGGAACCACAAATCCTGGTTTGAAGCTGGACTTTCTTTCTGTGTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000040772.9
ENSMUST00000237888.2
ENSMUST00000237960.2
CDS-3UTR GCA 90 bp AAACAGACACAGAAAGAAAGTCCAGCTTCAAACCAGGATTTGTGGTTCCTCATCACTCCCTCAGGCACCTaGTTGGCCTTGAACTTTCGC +
Preference number: 4 (lower is better)
Translates to: KQTQKESPASNQDLWFLITPSGT*LALNFR
Trigger: GCGAAAGTTCAAGGCCAAGCAGGTGCCTGAGGGAGT...GATGAGGAACCACAAATCCTGGTTTGAAGCTGGACTTTCTTTCTGTGTCTGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237888.2
CDS-3UTR CCA 90 bp GCAGGATTAGGAAGGAGTGGCTATAAGGATTCCCTAAGGAAGAGTGTGCTGTTGGTCAGTTTGTTGATGTaGTACTGCAGGGCAGCAAAC +
Preference number: 4 (lower is better)
Translates to: AGLGRSGYKDSLRKSVLLVSLLM*YCRAAN
Trigger: GTTTGCTGCCCTGCAGTACCACATCAACAAACTGAC...CAACAGCACACTCTTCCTTAGGGAATCCTTATAGCCACTCCTTCCTAATCCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237888.2
CDS-3UTR GCA 90 bp ACACAGAAAGAAAGTCCAGCTTCAAACCAGGATTTGTGGTTCCTCATCCGTGTCATCCACTGTGCGTACTaGTGTTCCTCAGGTAGATCT +
Preference number: 4 (lower is better)
Translates to: TQKESPASNQDLWFLIRVIHCAY*CSSGRS
Trigger: AGATCTACCTGAGGAACAGCAGTACGCACAGTGGAT...GACACGGATGAGGAACCACAAATCCTGGTTTGAAGCTGGACTTTCTTTCTGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237888.2
CDS-3UTR CCA 90 bp AAACAGACACAGAAAGAAAGTCCAGCTTCAAACCAGGATTTGTGGTTCCTCATCTCCCACCAAATGGCATaGTCAGACCAGTCCTGCTTG +
Preference number: 4 (lower is better)
Translates to: KQTQKESPASNQDLWFLISHQMA*SDQSCL
Trigger: CAAGCAGGACTGGTCTGACCATGCCATTTGGTGGGA...GATGAGGAACCACAAATCCTGGTTTGAAGCTGGACTTTCTTTCTGTGTCTGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000040772.9
ENSMUST00000237888.2
ENSMUST00000237960.2
CDS-3UTR CCA 90 bp CTGAAACAGACACAGAAAGAAAGTCCAGCTTCAAACCAGGATTTGTGGTTCCTCGTCAGTTTGTTGATGTaGTACTGCAGGGCAGCAAAC +
Preference number: 4 (lower is better)
Translates to: LKQTQKESPASNQDLWFLVSLLM*YCRAAN
Trigger: GTTTGCTGCCCTGCAGTACCACATCAACAAACTGAC...GAGGAACCACAAATCCTGGTTTGAAGCTGGACTTTCTTTCTGTGTCTGTTTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040772.9
ENSMUST00000237888.2
CDS-3UTR CCA 90 bp CAGACACAGAAAGAAAGTCCAGCTTCAAACCAGGATTTGTGGTTCCTCATCCGTATGGTCCTTGAGTTCTaGGATGGTAGTGAGACTATC +
Preference number: 4 (lower is better)
Translates to: QTQKESPASNQDLWFLIRMVLEF*DGSETI
Trigger: GATAGTCTCACTACCATCCCAGAACTCAAGGACCAT...ACGGATGAGGAACCACAAATCCTGGTTTGAAGCTGGACTTTCTTTCTGTGTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040772.9
ENSMUST00000237888.2
CDS-3UTR CCA 90 bp AAACAGACACAGAAAGAAAGTCCAGCTTCAAACCAGGATTTGTGGTTCCTCATCGTGGATAGGAAAATGTaGTGGTTCCCATCCCCACTC +
Preference number: 4 (lower is better)
Translates to: KQTQKESPASNQDLWFLIVDRKM*WFPSPL
Trigger: GAGTGGGGATGGGAACCACCACATTTTCCTATCCAC...GATGAGGAACCACAAATCCTGGTTTGAAGCTGGACTTTCTTTCTGTGTCTGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000237888.2
CDS-3UTR CAA 90 bp ATCATCCCTAGGCTGGCTGGTGGTAGCACCTACCCCAGCGAGGGCCCTGGCCTGGCCATGGTGCGGCCCTaGGAGGCCAGTCGGCAGGCA +
Preference number: 5 (lower is better)
Translates to: IIPRLAGGSTYPSEGPGLAMVRP*EASRQA
Trigger: TGCCTGCCGACTGGCCTCCAAGGGCCGCACCATGGC...CAGGCCAGGGCCCTCGCTGGGGTAGGTGCTACCACCAGCCAGCCTAGGGATGAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040772.9
ENSMUST00000237888.2
CDS-3UTR CAA 90 bp GTGGTAGCACCTACCCCAGCGAGGGCCCTGGCCTGCCTGGTGACAACAAGTGAAGCCATGGTGCGGCCCTaGGAGGCCAGTCGGCAGGCA +
Preference number: 5 (lower is better)
Translates to: VVAPTPARALACLVTTSEAMVRP*EASRQA
Trigger: TGCCTGCCGACTGGCCTCCAAGGGCCGCACCATGGC...TTCACTTGTTGTCACCAGGCAGGCCAGGGCCCTCGCTGGGGTAGGTGCTACCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040772.9
ENSMUST00000237888.2
CDS-3UTR CAA 90 bp TCCCTAGGCTGGCTGGTGGTAGCACCTACCCCAGCGAGGGCCCTGGCCTGCCTGAGCACATCCCCGGCCTaGATACCTTGCTGCATGAGG +
Preference number: 5 (lower is better)
Translates to: SLGWLVVAPTPARALACLSTSPA*IPCCMR
Trigger: CCTCATGCAGCAAGGTATCAAGGCCGGGGATGTGCT...CAGGCAGGCCAGGGCCCTCGCTGGGGTAGGTGCTACCACCAGCCAGCCTAGGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000040772.9
ENSMUST00000237888.2
ENSMUST00000237960.2
CDS-3UTR CAA 90 bp TCCCTAGGCTGGCTGGTGGTAGCACCTACCCCAGCGAGGGCCCTGGCCTGCCTGGGCACCTGCTTGGCCTaGAACTTTCGCTGGAACCGA +
Preference number: 5 (lower is better)
Translates to: SLGWLVVAPTPARALACLGTCLA*NFRWNR
Trigger: TCGGTTCCAGCGAAAGTTCAAGGCCAAGCAGGTGCC...CAGGCAGGCCAGGGCCCTCGCTGGGGTAGGTGCTACCACCAGCCAGCCTAGGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000237888.2
CDS TCA 90 bp AACTGGCCCGAAGCCGCAGCACACGTCTGTTGGGCAGTCGCAGGATaGCAGGTCGGTGCTGTGGCCCAAAGAAGAGGCGGGCATCGGCCA +
Preference number: 5 (lower is better)
Translates to: NWPEAAAHVCWAVAG*QVGAVAQRRGGHRP
Trigger: TGGCCGATGCCCGCCTCTTCTTTGGGCCACAGCACCGACCTGTCATCCTGCGACTGCCCAACAGACGTGTGCTGCGGCTTCGGGCCAGTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000040772.9
ENSMUST00000237888.2
ENSMUST00000237960.2
CDS CCA 90 bp ACCCCACCAATGTGCGACTCCCCCGTGACTCGGAGTGTGACAGACTaGGCCTCAGGGTCCTCCTCGCCCACAAACACCCTCAGCTCCCAG +
Preference number: 5 (lower is better)
Translates to: TPPMCDSPVTRSVTD*ASGSSSPTNTLSSQ
Trigger: CTGGGAGCTGAGGGTGTTTGTGGGCGAGGAGGACCCTGAGGCCCAGTCTGTCACACTCCGAGTCACGGGGGAGTCGCACATTGGTGGGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000040772.9
ENSMUST00000236188.2
ENSMUST00000237888.2
ENSMUST00000237960.2
CDS-3UTR CAA 90 bp GGGGCTCTGTGTGGCTCAGGGCCCATCATCCCTAGGCTGGCTGGTGGTAGCACCCCCGGCCTTGATACCTaGCTGCATGAGGCACCGAGA +
Preference number: 5 (lower is better)
Translates to: GALCGSGPIIPRLAGGSTPGLDT*LHEAPR
Trigger: TCTCGGTGCCTCATGCAGCAAGGTATCAAGGCCGGG...GGTGCTACCACCAGCCAGCCTAGGGATGATGGGCCCTGAGCCACACAGAGCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000040772.9
ENSMUST00000237888.2
ENSMUST00000237960.2
CDS CCA 90 bp TCTGGGTGCCTGATACTGAGGAGGCGGCAGATGGCAGCCACCGTTTaGAAGAGGGGCTTGGAGAAACTGGCCCGAAGCCGCAGCACACGT +
Preference number: 5 (lower is better)
Translates to: SGCLILRRRQMAATV*KRGLEKLARSRSTR
Trigger: ACGTGTGCTGCGGCTTCGGGCCAGTTTCTCCAAGCCCCTCTTCCAAACGGTGGCTGCCATCTGCCGCCTCCTCAGTATCAGGCACCCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000040772.9
ENSMUST00000237888.2
ENSMUST00000237960.2
CDS-3UTR CAA 90 bp GTGGTAGCACCTACCCCAGCGAGGGCCCTGGCCTGCCTGGTGACAACAAGTGAACCCGGCCTTGATACCTaGCTGCATGAGGCACCGAGA +
Preference number: 5 (lower is better)
Translates to: VVAPTPARALACLVTTSEPGLDT*LHEAPR
Trigger: TCTCGGTGCCTCATGCAGCAAGGTATCAAGGCCGGG...TTCACTTGTTGTCACCAGGCAGGCCAGGGCCCTCGCTGGGGTAGGTGCTACCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000040772.9
ENSMUST00000237888.2
ENSMUST00000237960.2
CDS-3UTR CAA 90 bp GGGGCTCTGTGTGGCTCAGGGCCCATCATCCCTAGGCTGGCTGGTGGTAGCACCCCGCTCAGGGTCAGTTaGTTGATGTGGTACTGCAGG +
Preference number: 5 (lower is better)
Translates to: GALCGSGPIIPRLAGGSTPLRVS*LMWYCR
Trigger: CCTGCAGTACCACATCAACAAACTGACCCTGAGCGG...GGTGCTACCACCAGCCAGCCTAGGGATGATGGGCCCTGAGCCACACAGAGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000040772.9
ENSMUST00000237888.2
CDS-3UTR CAA 90 bp CTGGTGGTAGCACCTACCCCAGCGAGGGCCCTGGCCTGCCTGGTGACAACAAGTAGCTTCACCTCCAGGTaGTTCAGGGCTGCATCCAGG +
Preference number: 5 (lower is better)
Translates to: LVVAPTPARALACLVTTSSFTSR*FRAASR
Trigger: CCTGGATGCAGCCCTGAACAACCTGGAGGTGAAGCT...ACTTGTTGTCACCAGGCAGGCCAGGGCCCTCGCTGGGGTAGGTGCTACCACCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040772.9
ENSMUST00000237888.2
CDS CCA 90 bp CAGCACACGTCTGTTGGGCAGTCGCAGGATGACAGGTCGGTGCTGTaGCCCAAAGAAGAGGCGGGCATCGGCCAGAATCCCGTACTTGTC +
Preference number: 5 (lower is better)
Translates to: QHTSVGQSQDDRSVL*PKEEAGIGQNPVLV
Trigger: GACAAGTACGGGATTCTGGCCGATGCCCGCCTCTTCTTTGGGCCACAGCACCGACCTGTCATCCTGCGACTGCCCAACAGACGTGTGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000040772.9
ENSMUST00000237888.2
ENSMUST00000237960.2
CDS-3UTR CAA 90 bp GTAGCACCTACCCCAGCGAGGGCCCTGGCCTGCCTGGTGACAACAAGTGAAGTTTCACAGCCCTTGAGGTaGAGCTGCTGGGTAGGGTCC +
Preference number: 5 (lower is better)
Translates to: VAPTPARALACLVTTSEVSQPLR*SCWVGS
Trigger: GGACCCTACCCAGCAGCTCAACCTCAAGGGCTGTGA...AACTTCACTTGTTGTCACCAGGCAGGCCAGGGCCCTCGCTGGGGTAGGTGCTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040772.9
ENSMUST00000237888.2
CDS-3UTR CAA 90 bp GCCCTGGCCTGCCTGGTGACAACAAGTGAAGTTGCCCAGCAGTGTACATCCCGGTCACAGCCCTTGAGGTaGAGCTGCTGGGTAGGGTCC +
Preference number: 5 (lower is better)
Translates to: ALACLVTTSEVAQQCTSRSQPLR*SCWVGS
Trigger: GGACCCTACCCAGCAGCTCAACCTCAAGGGCTGTGA...CCGGGATGTACACTGCTGGGCAACTTCACTTGTTGTCACCAGGCAGGCCAGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040772.9
ENSMUST00000237888.2
CDS-3UTR CAA 90 bp CCCCTCCACTCCCTCCAGGCAGGCCCTATACTTAACCGGAAGATCCGGAGATGGAGCACATCCCCGGCCTaGATACCTTGCTGCATGAGG +
Preference number: 5 (lower is better)
Translates to: PLHSLQAGPILNRKIRRWSTSPA*IPCCMR
Trigger: CCTCATGCAGCAAGGTATCAAGGCCGGGGATGTGCT...CCATCTCCGGATCTTCCGGTTAAGTATAGGGCCTGCCTGGAGGGAGTGGAGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000237960.2
CDS-3UTR CAA 90 bp GCCCTGGCCTGCCTGGTGACAACAAGTGAAGTTGCCCAGCAGTGTACATCCCGGACCACCTCACAGCCCTaGAGGTTGAGCTGCTGGGTA +
Preference number: 5 (lower is better)
Translates to: ALACLVTTSEVAQQCTSRTTSQP*RLSCWV
Trigger: TACCCAGCAGCTCAACCTCAAGGGCTGTGAGGTGGT...CCGGGATGTACACTGCTGGGCAACTTCACTTGTTGTCACCAGGCAGGCCAGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040772.9
ENSMUST00000237888.2
CDS GCA 90 bp TCTTCAGTGCAGTCGATCTCCTCTGTCAGTAAGTCCCAGCGGGCCTaGTCATACAGCTGGGTCAGCCGCACAGGGTCTGTCTTGGGATCC +
Preference number: 5 (lower is better)
Translates to: SSVQSISSVSKSQRA*SYSWVSRTGSVLGS
Trigger: GGATCCCAAGACAGACCCTGTGCGGCTGACCCAGCTGTATGAGCAGGCCCGCTGGGACTTACTGACAGAGGAGATCGACTGCACTGAAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040772.9
ENSMUST00000237888.2
CDS-3UTR CAA 90 bp AAGTTGCCCAGCAGTGTACATCCCGGGAGTGATGGAGCAGTGTGTTCAGGTGGGGTTTGGAAGAGGGGCTaGGAGAAACTGGCCCGAAGC +
Preference number: 5 (lower is better)
Translates to: KLPSSVHPGSDGAVCSGGVWKRG*EKLARS
Trigger: GCTTCGGGCCAGTTTCTCCAAGCCCCTCTTCCAAAC...CCCACCTGAACACACTGCTCCATCACTCCCGGGATGTACACTGCTGGGCAACTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000040772.9
ENSMUST00000237888.2
ENSMUST00000237960.2
CDS-3UTR CAA 90 bp AAGTTGCCCAGCAGTGTACATCCCGGGAGTGATGGAGCAGTGTGTTCAGGTGGGGATGGCAGCCACCGTTaGGAAGAGGGGCTTGGAGAA +
Preference number: 5 (lower is better)
Translates to: KLPSSVHPGSDGAVCSGGDGSHR*EEGLGE
Trigger: TTCTCCAAGCCCCTCTTCCAAACGGTGGCTGCCATC...CCCACCTGAACACACTGCTCCATCACTCCCGGGATGTACACTGCTGGGCAACTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000040772.9
ENSMUST00000237888.2
ENSMUST00000237960.2
CDS-3UTR CAA 90 bp AAGTTGCCCAGCAGTGTACATCCCGGGAGTGATGGAGCAGTGTGTTCAGGTGGGACCACCTCACAGCCCTaGAGGTTGAGCTGCTGGGTA +
Preference number: 5 (lower is better)
Translates to: KLPSSVHPGSDGAVCSGGTTSQP*RLSCWV
Trigger: TACCCAGCAGCTCAACCTCAAGGGCTGTGAGGTGGT...CCCACCTGAACACACTGCTCCATCACTCCCGGGATGTACACTGCTGGGCAACTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040772.9
ENSMUST00000237888.2
CDS-3UTR CAA 90 bp GCCCTGGCCTGCCTGGTGACAACAAGTGAAGTTGCCCAGCAGTGTACATCCCGGGAGGGTACCAGGAGTTaGATGCAGAACTTCTGGCCA +
Preference number: 5 (lower is better)
Translates to: ALACLVTTSEVAQQCTSREGTRS*MQNFWP
Trigger: TGGCCAGAAGTTCTGCATCAAACTCCTGGTACCCTC...CCGGGATGTACACTGCTGGGCAACTTCACTTGTTGTCACCAGGCAGGCCAGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040772.9
ENSMUST00000237888.2
CDS-3UTR CAA 90 bp GTGTACATCCCGGGAGTGATGGAGCAGTGTGTTCAGGTGGGTGTGGCCTTTGGGAAAGTCGGGCAAGGATaGCCAGGCCTGGATAAAGCG +
Preference number: 5 (lower is better)
Translates to: VYIPGVMEQCVQVGVAFGKVGQG*PGLDKA
Trigger: CGCTTTATCCAGGCCTGGCAATCCTTGCCCGACTTT...CCCAAAGGCCACACCCACCTGAACACACTGCTCCATCACTCCCGGGATGTACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040772.9
CDS-3UTR CAA 90 bp GTGTACATCCCGGGAGTGATGGAGCAGTGTGTTCAGGTGGGTGTGGCCTTTGGGTTCCATTGCCGCATGTaGCTGAAGCGCCAGGTCTTG +
Preference number: 5 (lower is better)
Translates to: VYIPGVMEQCVQVGVAFGFHCRM*LKRQVL
Trigger: CAAGACCTGGCGCTTCAGCAACATGCGGCAATGGAA...CCCAAAGGCCACACCCACCTGAACACACTGCTCCATCACTCCCGGGATGTACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040772.9
CDS-3UTR CAA 90 bp CCTACAATGGCCCTGGAACCCTTCCAGAGAGGAGTCTGGGACATGGCAGGATTAGTTTGGAAGAGGGGCTaGGAGAAACTGGCCCGAAGC +
Preference number: 5 (lower is better)
Translates to: PTMALEPFQRGVWDMAGLVWKRG*EKLARS
Trigger: GCTTCGGGCCAGTTTCTCCAAGCCCCTCTTCCAAAC...TAATCCTGCCATGTCCCAGACTCCTCTCTGGAAGGGTTCCAGGGCCATTGTAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000237888.2
ENSMUST00000237960.2
CDS-3UTR CAA 90 bp GATGTGACTGAATCGGGTCCTACAATGGCCCTGGAACCCTTCCAGAGAGGAGTCGATGGCAGCCACCGTTaGGAAGAGGGGCTTGGAGAA +
Preference number: 5 (lower is better)
Translates to: DVTESGPTMALEPFQRGVDGSHR*EEGLGE
Trigger: TTCTCCAAGCCCCTCTTCCAAACGGTGGCTGCCATC...GACTCCTCTCTGGAAGGGTTCCAGGGCCATTGTAGGACCCGATTCAGTCACATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000237888.2
ENSMUST00000237960.2
CDS TCA 90 bp AAGCCTCAGTCTGGGCGCTGTCCGAGAAGTGTGCTGGCATGCCTCTaGATAAAGTGGGTGCCACACCGCCAGCTAAGACAACCTTTGTCA +
Preference number: 5 (lower is better)
Translates to: KPQSGRCPRSVLACL*IKWVPHRQLRQPLS
Trigger: TGACAAAGGTTGTCTTAGCTGGCGGTGTGGCACCCACTTTATTCAGAGGCATGCCAGCACACTTCTCGGACAGCGCCCAGACTGAGGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000040772.9
ENSMUST00000237888.2
ENSMUST00000237960.2
CDS GCA 90 bp TACTTAAATCGCAGCCAAAGCACATCCCCGGCCTTGATACCTTGCTaGATGAGGCACCGAGATGAATCCAGCCACCTGCTGTGGAGCTGG +
Preference number: 5 (lower is better)
Translates to: YLNRSQSTSPALIPC*MRHRDESSHLLWSW
Trigger: CCAGCTCCACAGCAGGTGGCTGGATTCATCTCGGTGCCTCATGCAGCAAGGTATCAAGGCCGGGGATGTGCTTTGGCTGCGATTTAAGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000040772.9
ENSMUST00000237888.2
ENSMUST00000237960.2
CDS-3UTR CAA 90 bp GATGTGACTGAATCGGGTCCTACAATGGCCCTGGAACCCTTCCAGAGAGGAGTCCCGCTCAGGGTCAGTTaGTTGATGTGGTACTGCAGG +
Preference number: 5 (lower is better)
Translates to: DVTESGPTMALEPFQRGVPLRVS*LMWYCR
Trigger: CCTGCAGTACCACATCAACAAACTGACCCTGAGCGG...GACTCCTCTCTGGAAGGGTTCCAGGGCCATTGTAGGACCCGATTCAGTCACATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237888.2
CDS-3UTR CAA 90 bp ATGAGTCGGTTGTTGGCAATGCCTAGGATCTCATCTTTCCTGCTGCCCTTGAACTTCCCTGAGCCTCCATaGCTACCACCTGCCCGCTGC +
Preference number: 5 (lower is better)
Translates to: MSRLLAMPRISSFLLPLNFPEPP*LPPARC
Trigger: GCAGCGGGCAGGTGGTAGCAATGGAGGCTCAGGGAA...GTTCAAGGGCAGCAGGAAAGATGAGATCCTAGGCATTGCCAACAACCGACTCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237888.2
CDS-3UTR CAA 90 bp GCCCTGGCCTGCCTGGTGACAACAAGTGAAGTTGCCCAGCAGTGTACATCCCGGCAGCTGAAGGCCACATaGATGTGTTCATCGAACTCA +
Preference number: 5 (lower is better)
Translates to: ALACLVTTSEVAQQCTSRQLKAT*MCSSNS
Trigger: TGAGTTCGATGAACACATCAATGTGGCCTTCAGCTG...CCGGGATGTACACTGCTGGGCAACTTCACTTGTTGTCACCAGGCAGGCCAGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040772.9
CDS CCA 90 bp CTCCTCTTCAGGCTCCTTCTCCTTCTTCTTCTTCTCCTTCTTCTCTaGAGCACGCAGCAGAGACAGCTCCTCTGGGTGCCTGATACTGAG +
Preference number: 5 (lower is better)
Translates to: LLFRLLLLLLLLLLL*STQQRQLLWVPDTE
Trigger: CTCAGTATCAGGCACCCAGAGGAGCTGTCTCTGCTGCGTGCTCCAGAGAAGAAGGAGAAGAAGAAGAAGGAGAAGGAGCCTGAAGAGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000040772.9
ENSMUST00000237888.2
ENSMUST00000237960.2
CDS-3UTR CAA 90 bp TGTTCATCGAACTCAATGGCCACCTGCCGTATGTCCCAGTTGACGTTCCATTGCAGCACATCCCCGGCCTaGATACCTTGCTGCATGAGG +
Preference number: 5 (lower is better)
Translates to: CSSNSMATCRMSQLTFHCSTSPA*IPCCMR
Trigger: CCTCATGCAGCAAGGTATCAAGGCCGGGGATGTGCT...GCAATGGAACGTCAACTGGGACATACGGCAGGTGGCCATTGAGTTCGATGAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000237888.2
ENSMUST00000237960.2
CDS CCA 90 bp CTCCTCTTCAGGCTCCTTCTCCTTCTTCTTCTTCTCCTTCTTCTCTaGAGCACGCAGCAGAGACAGCTCCTCTGGGTGCCTGATACTGAT +
Preference number: 5 (lower is better)
Translates to: LLFRLLLLLLLLLLL*STQQRQLLWVPDTD
Trigger: ATCAGTATCAGGCACCCAGAGGAGCTGTCTCTGCTGCGTGCTCCAGAGAAGAAGGAGAAGAAGAAGAAGGAGAAGGAGCCTGAAGAGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236188.2
CDS-3UTR CAA 90 bp GCAGCTAGCAGACACACAGCTGAAGGCCACATTGATGTGTTCATCGAACTCAATCCCGGCCTTGATACCTaGCTGCATGAGGCACCGAGA +
Preference number: 5 (lower is better)
Translates to: AASRHTAEGHIDVFIELNPGLDT*LHEAPR
Trigger: TCTCGGTGCCTCATGCAGCAAGGTATCAAGGCCGGG...ATTGAGTTCGATGAACACATCAATGTGGCCTTCAGCTGTGTGTCTGCTAGCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000237888.2
ENSMUST00000237960.2
CDS TCA 90 bp TCTGCTCCCACCAAATGGCATGGTCAGACCAGTCCTGCTTGCGATTaGTTTCCTCCACGATCTTCAGAAGTACCCCACCAATGTGCGACT +
Preference number: 5 (lower is better)
Translates to: SAPTKWHGQTSPACD*FPPRSSEVPHQCAT
Trigger: AGTCGCACATTGGTGGGGTACTTCTGAAGATCGTGGAGGAAATCAATCGCAAGCAGGACTGGTCTGACCATGCCATTTGGTGGGAGCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000040772.9
ENSMUST00000237888.2
ENSMUST00000237960.2
CDS TCA 90 bp GTGCGTACTGCTGTTCCTCAGGTAGATCTCACTCATGCCCTCTGGTaGGGGTACCAGGAGTTTGATGCAGAACTTCTGGCCAGAGACATT +
Preference number: 5 (lower is better)
Translates to: VRTAVPQVDLTHALW*GYQEFDAELLARDI
Trigger: AATGTCTCTGGCCAGAAGTTCTGCATCAAACTCCTGGTACCCTCACCAGAGGGCATGAGTGAGATCTACCTGAGGAACAGCAGTACGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000237888.2
CDS-3UTR CAA 90 bp TGGGACATGGCAGGATTAGGAAGGAGTGGCTATAAGGATTCCCTAAGGAAGAGTGTTTGGAAGAGGGGCTaGGAGAAACTGGCCCGAAGC +
Preference number: 5 (lower is better)
Translates to: WDMAGLGRSGYKDSLRKSVWKRG*EKLARS
Trigger: GCTTCGGGCCAGTTTCTCCAAGCCCCTCTTCCAAAC...ACTCTTCCTTAGGGAATCCTTATAGCCACTCCTTCCTAATCCTGCCATGTCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000237888.2
ENSMUST00000237960.2
CDS-3UTR CAA 90 bp AGTCGGTTGTTGGCAATGCCTAGGATCTCATCTTTCCTGCTGCCCTTGAACCTGCCCCGGTGCTTCATCTaGGCTCTTATAGTAGGACAG +
Preference number: 5 (lower is better)
Translates to: SRLLAMPRISSFLLPLNLPRCFI*ALIVGQ
Trigger: CTGTCCTACTATAAGAGCCAAGATGAAGCACCGGGG...CAGGTTCAAGGGCAGCAGGAAAGATGAGATCCTAGGCATTGCCAACAACCGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000237888.2
CDS-3UTR CAA 90 bp AGTCGGTTGTTGGCAATGCCTAGGATCTCATCTTTCCTGCTGCCCTTGAACCTGGAGGGTACCAGGAGTTaGATGCAGAACTTCTGGCCA +
Preference number: 5 (lower is better)
Translates to: SRLLAMPRISSFLLPLNLEGTRS*MQNFWP
Trigger: TGGCCAGAAGTTCTGCATCAAACTCCTGGTACCCTC...CAGGTTCAAGGGCAGCAGGAAAGATGAGATCCTAGGCATTGCCAACAACCGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237888.2
CDS-3UTR CAA 90 bp CTGAAACAGACACAGAAAGAAAGTCCAGCTTCAAACCAGGATTTGTGGTTCCTCTTCCCTGAGCCTCCATaGCTACCACCTGCCCGCTGC +
Preference number: 5 (lower is better)
Translates to: LKQTQKESPASNQDLWFLFPEPP*LPPARC
Trigger: GCAGCGGGCAGGTGGTAGCAATGGAGGCTCAGGGAA...GAGGAACCACAAATCCTGGTTTGAAGCTGGACTTTCTTTCTGTGTCTGTTTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040772.9
ENSMUST00000237888.2
CDS-3UTR CAA 90 bp AAAGAAAGTCCAGCTTCAAACCAGGATTTGTGGTTCCTCATCCGTGTCTGGCATCCCTCAGGCACCTGCTaGGCCTTGAACTTTCGCTGG +
Preference number: 5 (lower is better)
Translates to: KESPASNQDLWFLIRVWHPSGTC*ALNFRW
Trigger: CCAGCGAAAGTTCAAGGCCAAGCAGGTGCCTGAGGG...ATGCCAGACACGGATGAGGAACCACAAATCCTGGTTTGAAGCTGGACTTTCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237888.2
CDS-3UTR CAA 90 bp CACAGAAAGAAAGTCCAGCTTCAAACCAGGATTTGTGGTTCCTCATCCGTGTCTAGCTTCACCTCCAGGTaGTTCAGGGCTGCATCCAGG +
Preference number: 5 (lower is better)
Translates to: HRKKVQLQTRICGSSSVSSFTSR*FRAASR
Trigger: CCTGGATGCAGCCCTGAACAACCTGGAGGTGAAGCT...AGACACGGATGAGGAACCACAAATCCTGGTTTGAAGCTGGACTTTCTTTCTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040772.9
ENSMUST00000237888.2
CDS-3UTR CAA 90 bp AGAAAGAAAGTCCAGCTTCAAACCAGGATTTGTGGTTCCTCATCCGTGTCTGGCCCAGTTGACGTTCCATaGCCGCATGTTGCTGAAGCG +
Preference number: 5 (lower is better)
Translates to: RKKVQLQTRICGSSSVSGPVDVP*PHVAEA
Trigger: CGCTTCAGCAACATGCGGCAATGGAACGTCAACTGG...GCCAGACACGGATGAGGAACCACAAATCCTGGTTTGAAGCTGGACTTTCTTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040772.9
CDS-3UTR CAA 90 bp AGAAAGAAAGTCCAGCTTCAAACCAGGATTTGTGGTTCCTCATCCGTGTCTGGCCCCCGGTGCTTCATCTaGGCTCTTATAGTAGGACAG +
Preference number: 5 (lower is better)
Translates to: RKKVQLQTRICGSSSVSGPRCFI*ALIVGQ
Trigger: CTGTCCTACTATAAGAGCCAAGATGAAGCACCGGGG...GCCAGACACGGATGAGGAACCACAAATCCTGGTTTGAAGCTGGACTTTCTTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000040772.9
ENSMUST00000237888.2
CDS-3UTR CAA 90 bp CACAGAAAGAAAGTCCAGCTTCAAACCAGGATTTGTGGTTCCTCATCCGTGTCTATCCGGAGATGGTCCTaGAGTTCTGGGATGGTAGTG +
Preference number: 5 (lower is better)
Translates to: HRKKVQLQTRICGSSSVSIRRWS*SSGMVV
Trigger: CACTACCATCCCAGAACTCAAGGACCATCTCCGGAT...AGACACGGATGAGGAACCACAAATCCTGGTTTGAAGCTGGACTTTCTTTCTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040772.9
ENSMUST00000237888.2
CDS TCA 72 bp GAAGCCGCAGCACACGTCTGTTGGGCAGTCGCAGGATaGCAGGTCGGTGCTGTGGCCCAAAGAAGAGGCGGG +
Preference number: 6 (lower is better)
Translates to: EAAAHVCWAVAG*QVGAVAQRRGG
Trigger: CCCGCCTCTTCTTTGGGCCACAGCACCGACCTGTCATCCTGCGACTGCCCAACAGACGTGTGCTGCGGCTTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000040772.9
ENSMUST00000237888.2
ENSMUST00000237960.2
CDS CCA 72 bp ATGTGCGACTCCCCCGTGACTCGGAGTGTGACAGACTaGGCCTCAGGGTCCTCCTCGCCCACAAACACCCTC +
Preference number: 6 (lower is better)
Translates to: MCDSPVTRSVTD*ASGSSSPTNTL
Trigger: GAGGGTGTTTGTGGGCGAGGAGGACCCTGAGGCCCAGTCTGTCACACTCCGAGTCACGGGGGAGTCGCACAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000040772.9
ENSMUST00000236188.2
ENSMUST00000237888.2
ENSMUST00000237960.2
CDS CCA 72 bp GGCGGCAGATGGCAGCCACCGTTTGGAAGAGGGGCTTaGAGAAACTGGCCCGAAGCCGCAGCACACGTCTGT +
Preference number: 6 (lower is better)
Translates to: GGRWQPPFGRGA*RNWPEAAAHVC
Trigger: ACAGACGTGTGCTGCGGCTTCGGGCCAGTTTCTCCAAGCCCCTCTTCCAAACGGTGGCTGCCATCTGCCGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000040772.9
ENSMUST00000237888.2
ENSMUST00000237960.2
CDS CCA 72 bp TCTGTTGGGCAGTCGCAGGATGACAGGTCGGTGCTGTaGCCCAAAGAAGAGGCGGGCATCGGCCAGAATCCC +
Preference number: 6 (lower is better)
Translates to: SVGQSQDDRSVL*PKEEAGIGQNP
Trigger: GGGATTCTGGCCGATGCCCGCCTCTTCTTTGGGCCACAGCACCGACCTGTCATCCTGCGACTGCCCAACAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000040772.9
ENSMUST00000237888.2
ENSMUST00000237960.2
CDS CCA 72 bp CTGATACTGAGGAGGCGGCAGATGGCAGCCACCGTTTaGAAGAGGGGCTTGGAGAAACTGGCCCGAAGCCGC +
Preference number: 6 (lower is better)
Translates to: LILRRRQMAATV*KRGLEKLARSR
Trigger: GCGGCTTCGGGCCAGTTTCTCCAAGCCCCTCTTCCAAACGGTGGCTGCCATCTGCCGCCTCCTCAGTATCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000040772.9
ENSMUST00000237888.2
ENSMUST00000237960.2
CDS CAA 90 bp AAGAGGGGCTTGGAGAAACTGGCCCGAAGCCGCAGCACACGTCTGTaGGGCAGTCGCAGGATGACAGGTCGGTGCTGTGGCCCAAAGAAG +
Preference number: 6 (lower is better)
Translates to: KRGLEKLARSRSTRL*GSRRMTGRCCGPKK
Trigger: CTTCTTTGGGCCACAGCACCGACCTGTCATCCTGCGACTGCCCAACAGACGTGTGCTGCGGCTTCGGGCCAGTTTCTCCAAGCCCCTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000040772.9
ENSMUST00000237888.2
ENSMUST00000237960.2
CDS CAA 90 bp ATACTGAGGAGGCGGCAGATGGCAGCCACCGTTTGGAAGAGGGGCTaGGAGAAACTGGCCCGAAGCCGCAGCACACGTCTGTTGGGCAGT +
Preference number: 6 (lower is better)
Translates to: ILRRRQMAATVWKRG*EKLARSRSTRLLGS
Trigger: ACTGCCCAACAGACGTGTGCTGCGGCTTCGGGCCAGTTTCTCCAAGCCCCTCTTCCAAACGGTGGCTGCCATCTGCCGCCTCCTCAGTAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000040772.9
ENSMUST00000237888.2
ENSMUST00000237960.2
CDS CCA 72 bp TCTGTCAGTAAGTCCCAGCGGGCCTGCTCATACAGCTaGGTCAGCCGCACAGGGTCTGTCTTGGGATCCAGG +
Preference number: 6 (lower is better)
Translates to: SVSKSQRACSYS*VSRTGSVLGSR
Trigger: CCTGGATCCCAAGACAGACCCTGTGCGGCTGACCCAGCTGTATGAGCAGGCCCGCTGGGACTTACTGACAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040772.9
ENSMUST00000237888.2
CDS CAA 90 bp TGCTGTGGCCCAAAGAAGAGGCGGGCATCGGCCAGAATCCCGTACTaGTCCAGCGTCCAGTGTGTCTGCAGCAGCCACTGTCTCTTCTGC +
Preference number: 6 (lower is better)
Translates to: CCGPKKRRASARIPY*SSVQCVCSSHCLFC
Trigger: GCAGAAGAGACAGTGGCTGCTGCAGACACACTGGACGCTGGACAAGTACGGGATTCTGGCCGATGCCCGCCTCTTCTTTGGGCCACAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000040772.9
ENSMUST00000237888.2
ENSMUST00000237960.2
CDS GCA 72 bp CGCAGCCAAAGCACATCCCCGGCCTTGATACCTTGCTaGATGAGGCACCGAGATGAATCCAGCCACCTGCTG +
Preference number: 6 (lower is better)
Translates to: RSQSTSPALIPC*MRHRDESSHLL
Trigger: CAGCAGGTGGCTGGATTCATCTCGGTGCCTCATGCAGCAAGGTATCAAGGCCGGGGATGTGCTTTGGCTGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000040772.9
ENSMUST00000237888.2
ENSMUST00000237960.2
CDS GCA 72 bp GAGGCCAGTCGGCAGGCAGCCATCCACTGTGCGTACTaGTGTTCCTCAGGTAGATCTCACTCATGCCCTCTG +
Preference number: 6 (lower is better)
Translates to: EASRQAAIHCAY*CSSGRSHSCPL
Trigger: CAGAGGGCATGAGTGAGATCTACCTGAGGAACAGCAGTACGCACAGTGGATGGCTGCCTGCCGACTGGCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237888.2
CDS CAA 72 bp CCAAAGAAGAGGCGGGCATCGGCCAGAATCCCGTACTaGTCCAGCGTCCAGTGTGTCTGCAGCAGCCACTGT +
Preference number: 6 (lower is better)
Translates to: PKKRRASARIPY*SSVQCVCSSHC
Trigger: ACAGTGGCTGCTGCAGACACACTGGACGCTGGACAAGTACGGGATTCTGGCCGATGCCCGCCTCTTCTTTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000040772.9
ENSMUST00000237888.2
ENSMUST00000237960.2
CDS TCA 72 bp TCTGGGCGCTGTCCGAGAAGTGTGCTGGCATGCCTCTaGATAAAGTGGGTGCCACACCGCCAGCTAAGACAA +
Preference number: 6 (lower is better)
Translates to: SGRCPRSVLACL*IKWVPHRQLRQ
Trigger: TTGTCTTAGCTGGCGGTGTGGCACCCACTTTATTCAGAGGCATGCCAGCACACTTCTCGGACAGCGCCCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000040772.9
ENSMUST00000237888.2
ENSMUST00000237960.2
CDS GCA 72 bp AATCGCAGCCAAAGCACATCCCCGGCCTTGATACCTTaGTGCATGAGGCACCGAGATGAATCCAGCCACCTG +
Preference number: 6 (lower is better)
Translates to: NRSQSTSPALIP*CMRHRDESSHL
Trigger: CAGGTGGCTGGATTCATCTCGGTGCCTCATGCAGCAAGGTATCAAGGCCGGGGATGTGCTTTGGCTGCGATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000040772.9
ENSMUST00000237888.2
ENSMUST00000237960.2
CDS CCA 72 bp AGGCTCCTTCTCCTTCTTCTTCTTCTCCTTCTTCTCTaGAGCACGCAGCAGAGACAGCTCCTCTGGGTGCCT +
Preference number: 6 (lower is better)
Translates to: RLLLLLLLLLLL*STQQRQLLWVP
Trigger: AGGCACCCAGAGGAGCTGTCTCTGCTGCGTGCTCCAGAGAAGAAGGAGAAGAAGAAGAAGGAGAAGGAGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000040772.9
ENSMUST00000236188.2
ENSMUST00000237888.2
ENSMUST00000237960.2
CDS TCA 72 bp GCTGTTCCTCAGGTAGATCTCACTCATGCCCTCTGGTaGGGGTACCAGGAGTTTGATGCAGAACTTCTGGCC +
Preference number: 6 (lower is better)
Translates to: AVPQVDLTHALW*GYQEFDAELLA
Trigger: GGCCAGAAGTTCTGCATCAAACTCCTGGTACCCTCACCAGAGGGCATGAGTGAGATCTACCTGAGGAACAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000237888.2
CDS CAA 72 bp ATAAAGTGGGTGCCACACCGCCAGCTAAGACAACCTTaGTCAGGTCATGCACCTCCTCTTCAGGCTCCTTCT +
Preference number: 6 (lower is better)
Translates to: IKWVPHRQLRQP*SGHAPPLQAPS
Trigger: AGAAGGAGCCTGAAGAGGAGGTGCATGACCTGACAAAGGTTGTCTTAGCTGGCGGTGTGGCACCCACTTTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000040772.9
ENSMUST00000237888.2
ENSMUST00000237960.2
CDS CAA 90 bp TTCTGCTCCCACCAAATGGCATGGTCAGACCAGTCCTGCTTGCGATaGATTTCCTCCACGATCTTCAGAAGTACCCCACCAATGTGCGAC +
Preference number: 6 (lower is better)
Translates to: FCSHQMAWSDQSCLR*ISSTIFRSTPPMCD
Trigger: GTCGCACATTGGTGGGGTACTTCTGAAGATCGTGGAGGAAATCAATCGCAAGCAGGACTGGTCTGACCATGCCATTTGGTGGGAGCAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000040772.9
ENSMUST00000237888.2
ENSMUST00000237960.2
CDS CAA 72 bp CACCAAATGGCATGGTCAGACCAGTCCTGCTTGCGATaGATTTCCTCCACGATCTTCAGAAGTACCCCACCA +
Preference number: 6 (lower is better)
Translates to: HQMAWSDQSCLR*ISSTIFRSTPP
Trigger: TGGTGGGGTACTTCTGAAGATCGTGGAGGAAATCAATCGCAAGCAGGACTGGTCTGACCATGCCATTTGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000040772.9
ENSMUST00000237888.2
ENSMUST00000237960.2
CDS CAA 72 bp TGCTCCCACCAAATGGCATGGTCAGACCAGTCCTGCTaGCGATTGATTTCCTCCACGATCTTCAGAAGTACC +
Preference number: 6 (lower is better)
Translates to: CSHQMAWSDQSC*RLISSTIFRST
Trigger: GGTACTTCTGAAGATCGTGGAGGAAATCAATCGCAAGCAGGACTGGTCTGACCATGCCATTTGGTGGGAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000040772.9
ENSMUST00000237888.2
ENSMUST00000237960.2
CDS TCA 72 bp ACCAAATGGCATGGTCAGACCAGTCCTGCTTGCGATTaGTTTCCTCCACGATCTTCAGAAGTACCCCACCAA +
Preference number: 6 (lower is better)
Translates to: TKWHGQTSPACD*FPPRSSEVPHQ
Trigger: TTGGTGGGGTACTTCTGAAGATCGTGGAGGAAATCAATCGCAAGCAGGACTGGTCTGACCATGCCATTTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000040772.9
ENSMUST00000237888.2
ENSMUST00000237960.2