Pregenerated sensors for FERMT2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000037712Ensembl transcript IDs: ENSMUST00000045905.15, ENSMUST00000141424.2, ENSMUST00000150660.3
Found 100 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ACAATACTGGTAAGTCCACCCCTCCCTGGCGCCCTTCTGGGCTCGTaGGCTAGGAATTGTCTAACTAGCACCAACGCAGATGTAATAGCG | + |
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Preference number: 1 (lower is better) Translates to: TILVSPPLPGALLGS*ARNCLTSTNADVIA Trigger: CGCTATTACATCTGCGTTGGTGCTAGTTAGACAATTCCTAGCTCACGAGCCCAGAAGGGCGCCAGGGAGGGGTGGACTTACCAGTATTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045905.15 |
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| 3UTR-3UTR CCA 90 bp | CACTGTAGACCGACTTTATACTGGGAGAGGGGATTAACTGGGTACCAGGAGCAGAGTGCACATATGTACTaGTCTGGTAAGGCAAAAAGG | + |
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Preference number: 2 (lower is better) Translates to: HCRPTLYWERGLTGYQEQSAHMY*SGKAKR Trigger: CCTTTTTGCCTTACCAGACCAGTACATATGTGCACT...CTGCTCCTGGTACCCAGTTAATCCCCTCTCCCAGTATAAAGTCGGTCTACAGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045905.15 |
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| 3UTR-3UTR CCA 90 bp | AGCATCAACAAATACCAAGCATCCACTGTAGACCGACTTTATACTGGGAGAGGGTATGTATGCCCTGGGTaGCTTGGTAGATGGCTTGTT | + |
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Preference number: 2 (lower is better) Translates to: SINKYQASTVDRLYTGRGYVCPG*LGRWLV Trigger: AACAAGCCATCTACCAAGCCACCCAGGGCATACATA...CCCTCTCCCAGTATAAAGTCGGTCTACAGTGGATGCTTGGTATTTGTTGATGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045905.15 |
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| 3UTR TCA 72 bp | GTAAGTCCACCCCTCCCTGGCGCCCTTCTGGGCTCGTaGGCTAGGAATTGTCTAACTAGCACCAACGCAGAT | + |
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Preference number: 3 (lower is better) Translates to: VSPPLPGALLGS*ARNCLTSTNAD Trigger: ATCTGCGTTGGTGCTAGTTAGACAATTCCTAGCTCACGAGCCCAGAAGGGCGCCAGGGAGGGGTGGACTTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045905.15 |
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| 3UTR-3UTR CAA 90 bp | CACTGTAGACCGACTTTATACTGGGAGAGGGGATTAACTGGGTACCAGGAGCAGGGCTTGGTAGATGGCTaGTTTCTTAGTTTGGTTACT | + |
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Preference number: 3 (lower is better) Translates to: HCRPTLYWERGLTGYQEQGLVDG*FLSLVT Trigger: AGTAACCAAACTAAGAAACAAGCCATCTACCAAGCC...CTGCTCCTGGTACCCAGTTAATCCCCTCTCCCAGTATAAAGTCGGTCTACAGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045905.15 |
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| 3UTR TCA 72 bp | GATGGCTTGTTTCTTAGTTTGGTTACTGTCAGTCAGTaGCAGCTTTCCGTGGCCCTAAGGACTGTTGGGAAT | + |
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Preference number: 3 (lower is better) Translates to: DGLFLSLVTVSQ*QLSVALRTVGN Trigger: ATTCCCAACAGTCCTTAGGGCCACGGAAAGCTGTCACTGACTGACAGTAACCAAACTAAGAAACAAGCCATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045905.15 |
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| 3UTR-3UTR CAA 90 bp | AACTGGGTACCAGGAGCAGGGTACTTTAAAAGAAGGCATCAATTAAACACAAACTATGCCCTGGGTGGCTaGGTAGATGGCTTGTTTCTT | + |
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Preference number: 3 (lower is better) Translates to: NWVPGAGYFKRRHQLNTNYALGG*VDGLFL Trigger: AAGAAACAAGCCATCTACCAAGCCACCCAGGGCATA...GTTTGTGTTTAATTGATGCCTTCTTTTAAAGTACCCTGCTCCTGGTACCCAGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045905.15 |
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| 3UTR CCA 72 bp | AGATTAACAATCGTGCTTGTTAGTGCACATATGTACTaGTCTGGTAAGGCAAAAAGGTATCATGATAAAATA | + |
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Preference number: 3 (lower is better) Translates to: RLTIVLVSAHMY*SGKAKRYHDKI Trigger: TATTTTATCATGATACCTTTTTGCCTTACCAGACCAGTACATATGTGCACTAACAAGCACGATTGTTAATCT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045905.15 |
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| CDS-3UTR TCA 90 bp | GCAGATGTAATAGCGCAACAGACTAGAACACAGCCGGTCCAGGCTGTAGTTAAGCACGGTTCAGGTCCGTaGCATGGACGCTCAGTTCCC | + |
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Preference number: 4 (lower is better) Translates to: ADVIAQQTRTQPVQAVVKHGSGP*HGRSVP Trigger: GGGAACTGAGCGTCCATGTCACGGACCTGAACCGTG...CTTAACTACAGCCTGGACCGGCTGTGTTCTAGTCTGTTGCGCTATTACATCTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045905.15 |
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| CDS-3UTR TCA 90 bp | CTAACTAGCACCAACGCAGATGTAATAGCGCAACAGACTAGAACACAGCCGGTCCGGTCACTCTCAGAGTaGCATCACGGTTCAGGTCCG | + |
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Preference number: 4 (lower is better) Translates to: LTSTNADVIAQQTRTQPVRSLSE*HHGSGP Trigger: CGGACCTGAACCGTGATGTCACTCTGAGAGTGACCG...GACCGGCTGTGTTCTAGTCTGTTGCGCTATTACATCTGCGTTGGTGCTAGTTAG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045905.15 |
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| CDS-3UTR TCA 90 bp | GCAGATGTAATAGCGCAACAGACTAGAACACAGCCGGTCCAGGCTGTAGTTAAGCCCAGGATTGCCTTCTaGCAGGGCACTGTCACCAAA | + |
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Preference number: 4 (lower is better) Translates to: ADVIAQQTRTQPVQAVVKPRIAF*QGTVTK Trigger: TTTGGTGACAGTGCCCTGTCAGAAGGCAATCCTGGG...CTTAACTACAGCCTGGACCGGCTGTGTTCTAGTCTGTTGCGCTATTACATCTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045905.15 |
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| CDS-3UTR GCA 90 bp | AGCATCAACAAATACCAAGCATCCACTGTAGACCGACTTTATACTGGGAGAGGGATCACCCCTCCGATGTaGACCTCCCCGGTCACTCTC | + |
|
Preference number: 4 (lower is better) Translates to: SINKYQASTVDRLYTGRGITPPM*TSPVTL Trigger: GAGAGTGACCGGGGAGGTGCACATCGGAGGGGTGAT...CCCTCTCCCAGTATAAAGTCGGTCTACAGTGGATGCTTGGTATTTGTTGATGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045905.15 |
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| CDS-3UTR CCA 90 bp | CACTGTAGACCGACTTTATACTGGGAGAGGGGATTAACTGGGTACCAGGAGCAGTCACATACTTCATGTTaGGAAGCTGCAGGCGGAGCA | + |
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Preference number: 4 (lower is better) Translates to: HCRPTLYWERGLTGYQEQSHTSC*EAAGGA Trigger: TGCTCCGCCTGCAGCTTCCCAACATGAAGTATGTGA...CTGCTCCTGGTACCCAGTTAATCCCCTCTCCCAGTATAAAGTCGGTCTACAGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045905.15 |
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| CDS-3UTR CCA 90 bp | GCAGATGTAATAGCGCAACAGACTAGAACACAGCCGGTCCAGGCTGTAGTTAAGCCATGGTCTTGCCTTTaGAGGCTAACCTGCAAGCTG | + |
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Preference number: 4 (lower is better) Translates to: ADVIAQQTRTQPVQAVVKPWSCL*RLTCKL Trigger: CAGCTTGCAGGTTAGCCTCCAAAGGCAAGACCATGG...CTTAACTACAGCCTGGACCGGCTGTGTTCTAGTCTGTTGCGCTATTACATCTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045905.15 |
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| CDS-3UTR CCA 90 bp | CACTGTAGACCGACTTTATACTGGGAGAGGGGATTAACTGGGTACCAGGAGCAGGATCAGCTGGGGGTCTaGGTTCAGATGCTGCATTTT | + |
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Preference number: 4 (lower is better) Translates to: HCRPTLYWERGLTGYQEQDQLGV*VQMLHF Trigger: AAAATGCAGCATCTGAACCCAGACCCCCAGCTGATC...CTGCTCCTGGTACCCAGTTAATCCCCTCTCCCAGTATAAAGTCGGTCTACAGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045905.15 |
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| CDS-3UTR CCA 90 bp | AGCATCAACAAATACCAAGCATCCACTGTAGACCGACTTTATACTGGGAGAGGGTTCAGGTCCGTGACATaGACGCTCAGTTCCCACGTC | + |
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Preference number: 4 (lower is better) Translates to: SINKYQASTVDRLYTGRGFRSVT*TLSSHV Trigger: GACGTGGGAACTGAGCGTCCATGTCACGGACCTGAA...CCCTCTCCCAGTATAAAGTCGGTCTACAGTGGATGCTTGGTATTTGTTGATGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045905.15 |
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| CDS-3UTR CCA 90 bp | AAGGGCATCACGGCAAGTCACGAGCATCATGAAGTCATTCGTAATTTAGCAGATTGGTCAGGGATCAGCTaGGGGTCTGGGTTCAGATGC | + |
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Preference number: 4 (lower is better) Translates to: KGITASHEHHEVIRNLADWSGIS*GSGFRC Trigger: GCATCTGAACCCAGACCCCCAGCTGATCCCTGACCA...ATCTGCTAAATTACGAATGACTTCATGATGCTCGTGACTTGCCGTGATGCCCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045905.15 |
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| CDS-3UTR TCA 90 bp | TATATGTATGCCCTGGGTGGCTTGGTAGATGGCTTGTTTCTTAGTTTGGTTACTGTTTGTGCTGCGGGGTaGACTGGAGCTTGGCATCTG | + |
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Preference number: 4 (lower is better) Translates to: YMYALGGLVDGLFLSLVTVCAAG*TGAWHL Trigger: CAGATGCCAAGCTCCAGTTCACCCCGCAGCACAAAC...AGTAACCAAACTAAGAAACAAGCCATCTACCAAGCCACCCAGGGCATACATATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045905.15 |
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| CDS-3UTR TCA 90 bp | CTAACTAGCACCAACGCAGATGTAATAGCGCAACAGACTAGAACACAGCCGGTCTGCCAGTATTTCTGGTaGTGTTACTGGCTGACTGAC | + |
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Preference number: 4 (lower is better) Translates to: LTSTNADVIAQQTRTQPVCQYFW*CYWLTD Trigger: GTCAGTCAGCCAGTAACATCACCAGAAATACTGGCA...GACCGGCTGTGTTCTAGTCTGTTGCGCTATTACATCTGCGTTGGTGCTAGTTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045905.15 |
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| CDS-3UTR TCA 90 bp | GCAGATGTAATAGCGCAACAGACTAGAACACAGCCGGTCCAGGCTGTAGTTAAGAAAAGCTGTAGTACTTaGATCGGAGCAGCAAGGCCT | + |
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Preference number: 4 (lower is better) Translates to: ADVIAQQTRTQPVQAVVKKSCST*IGAARP Trigger: AGGCCTTGCTGCTCCGATTCAAGTACTACAGCTTTT...CTTAACTACAGCCTGGACCGGCTGTGTTCTAGTCTGTTGCGCTATTACATCTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045905.15 |
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| CDS-3UTR GCA 90 bp | AGCATCAACAAATACCAAGCATCCACTGTAGACCGACTTTATACTGGGAGAGGGTGGCATCTGCCTGGATaGCACACTTATCCAAGGTCC | + |
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Preference number: 4 (lower is better) Translates to: SINKYQASTVDRLYTGRGWHLPG*HTYPRS Trigger: GGACCTTGGATAAGTGTGGCATCCAGGCAGATGCCA...CCCTCTCCCAGTATAAAGTCGGTCTACAGTGGATGCTTGGTATTTGTTGATGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045905.15 |
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| CDS-3UTR GCA 90 bp | AAGGCTGCATATCTTAGGCAGATAGTGAGTATGCTGGTGAATACTAAGAGTACTAGGCGGAGCAGTTTGTaGTGCGGGGTGAACTGGAGC | + |
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Preference number: 4 (lower is better) Translates to: KAAYLRQIVSMLVNTKSTRRSSL*CGVNWS Trigger: GCTCCAGTTCACCCCGCAGCACAAACTGCTCCGCCT...AGTACTCTTAGTATTCACCAGCATACTCACTATCTGCCTAAGATATGCAGCCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045905.15 |
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| CDS-3UTR CCA 90 bp | TATATGTATGCCCTGGGTGGCTTGGTAGATGGCTTGTTTCTTAGTTTGGTTACTCGCGTAGCAGCCATCTaGCATCCTTATCCCGTCCAG | + |
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Preference number: 4 (lower is better) Translates to: YMYALGGLVDGLFLSLVTRVAAI*HPYPVQ Trigger: CTGGACGGGATAAGGATGCCAGATGGCTGCTACGCG...AGTAACCAAACTAAGAAACAAGCCATCTACCAAGCCACCCAGGGCATACATATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045905.15 |
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| CDS-3UTR CCA 90 bp | AGCATCAACAAATACCAAGCATCCACTGTAGACCGACTTTATACTGGGAGAGGGGAGCAGGTGTACCACTaGACTCTTCTCGGCTCTTGT | + |
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Preference number: 4 (lower is better) Translates to: SINKYQASTVDRLYTGRGEQVYH*TLLGSC Trigger: ACAAGAGCCGAGAAGAGTCCAGTGGTACACCTGCTC...CCCTCTCCCAGTATAAAGTCGGTCTACAGTGGATGCTTGGTATTTGTTGATGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045905.15 |
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| CDS-3UTR CCA 90 bp | CCAAGCATCCACTGTAGACCGACTTTATACTGGGAGAGGGGATTAACTGGGTACCCACCAATGAATTCGTaGACCACCTTGCAGTCTACT | + |
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Preference number: 4 (lower is better) Translates to: PSIHCRPTLYWERGLTGYPPMNS*TTLQST Trigger: AGTAGACTGCAAGGTGGTCCACGAATTCATTGGTGG...GTACCCAGTTAATCCCCTCTCCCAGTATAAAGTCGGTCTACAGTGGATGCTTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045905.15 |
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| CDS-3UTR GCA 90 bp | CACTGTAGACCGACTTTATACTGGGAGAGGGGATTAACTGGGTACCAGGAGCAGATGATACTGCAAGGCTaGGAACATCATCATCTCTTC | + |
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Preference number: 4 (lower is better) Translates to: HCRPTLYWERGLTGYQEQMILQG*EHHHLF Trigger: GAAGAGATGATGATGTTCGCAGCCTTGCAGTATCAT...CTGCTCCTGGTACCCAGTTAATCCCCTCTCCCAGTATAAAGTCGGTCTACAGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045905.15 |
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| CDS-3UTR GCA 90 bp | AAGGGCATCACGGCAAGTCACGAGCATCATGAAGTCATTCGTAATTTAGCAGATTGTCTGCCATGGTCTTaGCTTTGGAGGCTAACCTGC | + |
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Preference number: 4 (lower is better) Translates to: KGITASHEHHEVIRNLADCLPWS*LWRLTC Trigger: GCAGGTTAGCCTCCAAAGGCAAGACCATGGCAGACA...ATCTGCTAAATTACGAATGACTTCATGATGCTCGTGACTTGCCGTGATGCCCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045905.15 |
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| CDS-3UTR TCA 90 bp | AGCATCAACAAATACCAAGCATCCACTGTAGACCGACTTTATACTGGGAGAGGGGTCACCCAGAATTGTTaGTGTTTTCCCGCCTTCCAA | + |
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Preference number: 4 (lower is better) Translates to: SINKYQASTVDRLYTGRGVTQNC*CFPAFQ Trigger: TTGGAAGGCGGGAAAACATCAACAATTCTGGGTGAC...CCCTCTCCCAGTATAAAGTCGGTCTACAGTGGATGCTTGGTATTTGTTGATGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045905.15 |
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| CDS-3UTR GCA 90 bp | AACTGGGTACCAGGAGCAGGGTACTTTAAAAGAAGGCATCAATTAAACACAAACCTTTGGAGGCTAACCTaGAAGCTGCCATCCAGTGCG | + |
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Preference number: 4 (lower is better) Translates to: NWVPGAGYFKRRHQLNTNLWRLT*KLPSSA Trigger: CGCACTGGATGGCAGCTTGCAGGTTAGCCTCCAAAG...GTTTGTGTTTAATTGATGCCTTCTTTTAAAGTACCCTGCTCCTGGTACCCAGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045905.15 |
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| CDS-3UTR GCA 90 bp | CCAAGCATCCACTGTAGACCGACTTTATACTGGGAGAGGGGATTAACTGGGTACTCTGGGTTCAGATGCTaGATTTTCAGGAAGGAAAGA | + |
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Preference number: 4 (lower is better) Translates to: PSIHCRPTLYWERGLTGYSGFRC*IFRKER Trigger: TCTTTCCTTCCTGAAAATGCAGCATCTGAACCCAGA...GTACCCAGTTAATCCCCTCTCCCAGTATAAAGTCGGTCTACAGTGGATGCTTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045905.15 |
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| CDS-3UTR GCA 90 bp | AGCATCAACAAATACCAAGCATCCACTGTAGACCGACTTTATACTGGGAGAGGGGGGTCTGGGTTCAGATaGTGCATTTTCAGGAAGGAA | + |
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Preference number: 4 (lower is better) Translates to: SINKYQASTVDRLYTGRGGSGFR*CIFRKE Trigger: TTCCTTCCTGAAAATGCAGCATCTGAACCCAGACCC...CCCTCTCCCAGTATAAAGTCGGTCTACAGTGGATGCTTGGTATTTGTTGATGCT 47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000045905.15 |
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| CDS-3UTR TCA 90 bp | CTAACTAGCACCAACGCAGATGTAATAGCGCAACAGACTAGAACACAGCCGGTCGTTAAATTTCTGGCCTaGAATGTTTACATCCGGAGT | + |
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Preference number: 4 (lower is better) Translates to: LTSTNADVIAQQTRTQPVVKFLA*NVYIRS Trigger: ACTCCGGATGTAAACATTTCAGGCCAGAAATTTAAC...GACCGGCTGTGTTCTAGTCTGTTGCGCTATTACATCTGCGTTGGTGCTAGTTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045905.15 |
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| CDS-3UTR GCA 90 bp | CTAACTAGCACCAACGCAGATGTAATAGCGCAACAGACTAGAACACAGCCGGTCCCCTTGGTTGGTTTTTaGTTTATCAAGAAGAGCTTG | + |
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Preference number: 4 (lower is better) Translates to: LTSTNADVIAQQTRTQPVPLVGF*FIKKSL Trigger: CAAGCTCTTCTTGATAAAGCAAAAACCAACCAAGGG...GACCGGCTGTGTTCTAGTCTGTTGCGCTATTACATCTGCGTTGGTGCTAGTTAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045905.15 |
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| CDS-3UTR GCA 90 bp | AAGGGCATCACGGCAAGTCACGAGCATCATGAAGTCATTCGTAATTTAGCAGATCAACCGGACCTCATCTaGAAACTCTACAGTGACCAT | + |
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Preference number: 4 (lower is better) Translates to: KGITASHEHHEVIRNLADQPDLI*KLYSDH Trigger: ATGGTCACTGTAGAGTTTGCAGATGAGGTCCGGTTG...ATCTGCTAAATTACGAATGACTTCATGATGCTCGTGACTTGCCGTGATGCCCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045905.15 |
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| CDS-3UTR TCA 90 bp | AAGGGCATCACGGCAAGTCACGAGCATCATGAAGTCATTCGTAATTTAGCAGATACTGCCAGGCTTGAATaGATCTCATCTTGGCTTCAA | + |
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Preference number: 4 (lower is better) Translates to: KGITASHEHHEVIRNLADTARLE*ISSWLQ Trigger: TTGAAGCCAAGATGAGATTCATTCAAGCCTGGCAGT...ATCTGCTAAATTACGAATGACTTCATGATGCTCGTGACTTGCCGTGATGCCCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045905.15 |
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| CDS-3UTR GCA 90 bp | GTACCAGGAGCAGGGTACTTTAAAAGAAGGCATCAATTAAACACAAACACATGCCAAGTATCCCAGGATTaGCTTCTGACAGGGCACTGT | + |
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Preference number: 4 (lower is better) Translates to: VPGAGYFKRRHQLNTNTCQVSQD*LLTGHC Trigger: ACAGTGCCCTGTCAGAAGGCAATCCTGGGATACTTG...GCATGTGTTTGTGTTTAATTGATGCCTTCTTTTAAAGTACCCTGCTCCTGGTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045905.15 |
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| CDS-3UTR GCA 90 bp | GCAGATGTAATAGCGCAACAGACTAGAACACAGCCGGTCCAGGCTGTAGTTAAGGTGCTGTTATCTGTTTaGTCTTATACTTCTTCAGGT | + |
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Preference number: 4 (lower is better) Translates to: ADVIAQQTRTQPVQAVVKVLLSV*SYTSSG Trigger: ACCTGAAGAAGTATAAGAGCAAACAGATAACAGCAC...CTTAACTACAGCCTGGACCGGCTGTGTTCTAGTCTGTTGCGCTATTACATCTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045905.15 |
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| CDS-3UTR GCA 90 bp | GTACCAGGAGCAGGGTACTTTAAAAGAAGGCATCAATTAAACACAAACACATGCGCCAGATCTCATTCATaGCCTCTGCTACCGGAATTA | + |
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Preference number: 4 (lower is better) Translates to: VPGAGYFKRRHQLNTNTCARSHS*PLLPEL Trigger: TAATTCCGGTAGCAGAGGGCATGAATGAGATCTGGC...GCATGTGTTTGTGTTTAATTGATGCCTTCTTTTAAAGTACCCTGCTCCTGGTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045905.15 |
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| CDS-3UTR TCA 90 bp | AAGGGCATCACGGCAAGTCACGAGCATCATGAAGTCATTCGTAATTTAGCAGATTTATCAAGAAGAGCTTaGGGCTTGAACATTTTTGCC | + |
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Preference number: 4 (lower is better) Translates to: KGITASHEHHEVIRNLADLSRRA*GLNIFA Trigger: GGCAAAAATGTTCAAGCCTCAAGCTCTTCTTGATAA...ATCTGCTAAATTACGAATGACTTCATGATGCTCGTGACTTGCCGTGATGCCCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045905.15 |
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| CDS-3UTR TCA 90 bp | AAGGCTGCATATCTTAGGCAGATAGTGAGTATGCTGGTGAATACTAAGAGTACTGTCTTTCGCACGAGTTaGGAGAAATATGTAACCACC | + |
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Preference number: 4 (lower is better) Translates to: KAAYLRQIVSMLVNTKSTVFRTS*EKYVTT Trigger: GGTGGTTACATATTTCTCTCAACTCGTGCGAAAGAC...AGTACTCTTAGTATTCACCAGCATACTCACTATCTGCCTAAGATATGCAGCCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045905.15 |
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| CDS-3UTR GCA 90 bp | AAGGCTGCATATCTTAGGCAGATAGTGAGTATGCTGGTGAATACTAAGAGTACTGTTGTAAGAACTGTCTaGCATGGTCTTGCCTTTGGA | + |
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Preference number: 4 (lower is better) Translates to: KAAYLRQIVSMLVNTKSTVVRTV*HGLAFG Trigger: TCCAAAGGCAAGACCATGGCAGACAGTTCTTACAAC...AGTACTCTTAGTATTCACCAGCATACTCACTATCTGCCTAAGATATGCAGCCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045905.15 |
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| CDS-3UTR CCA 90 bp | AAGGGCATCACGGCAAGTCACGAGCATCATGAAGTCATTCGTAATTTAGCAGATGAATCTAGCCACCCTTaGTTGGTTTTTGCTTTATCA | + |
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Preference number: 4 (lower is better) Translates to: KGITASHEHHEVIRNLADESSHP*LVFALS Trigger: TGATAAAGCAAAAACCAACCAAGGGTGGCTAGATTC...ATCTGCTAAATTACGAATGACTTCATGATGCTCGTGACTTGCCGTGATGCCCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045905.15 |
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| CDS-3UTR TCA 90 bp | AAGGCTGCATATCTTAGGCAGATAGTGAGTATGCTGGTGAATACTAAGAGTACTCAGGGTGTCTTATATTaGAAGTCTTGCAGATGTCAG | + |
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Preference number: 4 (lower is better) Translates to: KAAYLRQIVSMLVNTKSTQGVLY*KSCRCQ Trigger: CTGACATCTGCAAGACTTTCAATATAAGACACCCTG...AGTACTCTTAGTATTCACCAGCATACTCACTATCTGCCTAAGATATGCAGCCTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045905.15 |
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| CDS-3UTR GCA 90 bp | GTACCAGGAGCAGGGTACTTTAAAAGAAGGCATCAATTAAACACAAACACATGCTTCTCCTTCACATCTTaGTCCATGAGAGATCTTGAG | + |
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Preference number: 4 (lower is better) Translates to: VPGAGYFKRRHQLNTNTCFSFTS*SMRDLE Trigger: CTCAAGATCTCTCATGGAGCAAGATGTGAAGGAGAA...GCATGTGTTTGTGTTTAATTGATGCCTTCTTTTAAAGTACCCTGCTCCTGGTAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045905.15 |
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| CDS-3UTR TCA 90 bp | AAGGCTGCATATCTTAGGCAGATAGTGAGTATGCTGGTGAATACTAAGAGTACTGAAGAGCTTGAGGCTTaGACATTTTTGCCAGTATTT | + |
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Preference number: 4 (lower is better) Translates to: KAAYLRQIVSMLVNTKSTEELEA*TFLPVF Trigger: AAATACTGGCAAAAATGTTCAAGCCTCAAGCTCTTC...AGTACTCTTAGTATTCACCAGCATACTCACTATCTGCCTAAGATATGCAGCCTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045905.15 |
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| CDS-3UTR CCA 90 bp | AAGGCTGCATATCTTAGGCAGATAGTGAGTATGCTGGTGAATACTAAGAGTACTGCTTCGTCTTCAGACTaGTCATCTAGCTTTTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: KAAYLRQIVSMLVNTKSTASSSD*SSSFFF Trigger: AAAGAAAAAGCTAGATGACCAGTCTGAAGACGAAGC...AGTACTCTTAGTATTCACCAGCATACTCACTATCTGCCTAAGATATGCAGCCTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045905.15 |
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| CDS-3UTR CCA 90 bp | TATATGTATGCCCTGGGTGGCTTGGTAGATGGCTTGTTTCTTAGTTTGGTTACTTCTAAACTTTCATTTTaGTCTTTCGCACGAGTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: YMYALGGLVDGLFLSLVTSKLSF*SFARVE Trigger: CTCAACTCGTGCGAAAGACCAAAATGAAAGTTTAGA...AGTAACCAAACTAAGAAACAAGCCATCTACCAAGCCACCCAGGGCATACATATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045905.15 |
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| CDS GCA 90 bp | TCAGAGAAGTTCACTTTCACCTTCACATACTTCATGTTGGGAAGCTaGAGGCGGAGCAGTTTGTGCTGCGGGGTGAACTGGAGCTTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: SEKFTFTFTYFMLGS*RRSSLCCGVNWSLA Trigger: TGCCAAGCTCCAGTTCACCCCGCAGCACAAACTGCTCCGCCTGCAGCTTCCCAACATGAAGTATGTGAAGGTGAAAGTGAACTTCTCTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045905.15 ENSMUST00000150660.3 |
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| CDS GCA 90 bp | GATGGCGTCACCTGTGCTGGCGTCCATCCGAATCAACCTGTTGTATaGAATTCCAATAAGTTCTTCTCTCTTGCCGCCTTGAAACCTCGC | + |
|
Preference number: 5 (lower is better) Translates to: DGVTCAGVHPNQPVV*NSNKFFSLAALKPR Trigger: GCGAGGTTTCAAGGCGGCAAGAGAGAAGAACTTATTGGAATTGCATACAACAGGTTGATTCGGATGGACGCCAGCACAGGTGACGCCATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045905.15 |
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| CDS-3UTR CAA 90 bp | TATATGTATGCCCTGGGTGGCTTGGTAGATGGCTTGTTTCTTAGTTTGGTTACTTGCAGGCGGAGCAGTTaGTGCTGCGGGGTGAACTGG | + |
|
Preference number: 5 (lower is better) Translates to: YMYALGGLVDGLFLSLVTCRRSS*CCGVNW Trigger: CCAGTTCACCCCGCAGCACAAACTGCTCCGCCTGCA...AGTAACCAAACTAAGAAACAAGCCATCTACCAAGCCACCCAGGGCATACATATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045905.15 |
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| CDS-3UTR CAA 90 bp | TATATGTATGCCCTGGGTGGCTTGGTAGATGGCTTGTTTCTTAGTTTGGTTACTGGGGTGAACTGGAGCTaGGCATCTGCCTGGATGCCA | + |
|
Preference number: 5 (lower is better) Translates to: YMYALGGLVDGLFLSLVTGVNWS*ASAWMP Trigger: TGGCATCCAGGCAGATGCCAAGCTCCAGTTCACCCC...AGTAACCAAACTAAGAAACAAGCCATCTACCAAGCCACCCAGGGCATACATATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045905.15 |
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| CDS-3UTR CAA 90 bp | AGCATCAACAAATACCAAGCATCCACTGTAGACCGACTTTATACTGGGAGAGGGGCAAGTATCCCAGGATaGCCTTCTGACAGGGCACTG | + |
|
Preference number: 5 (lower is better) Translates to: SINKYQASTVDRLYTGRGASIPG*PSDRAL Trigger: CAGTGCCCTGTCAGAAGGCAATCCTGGGATACTTGC...CCCTCTCCCAGTATAAAGTCGGTCTACAGTGGATGCTTGGTATTTGTTGATGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045905.15 |
||
| CDS-3UTR CAA 90 bp | AGCATCAACAAATACCAAGCATCCACTGTAGACCGACTTTATACTGGGAGAGGGGCCATGGTCTTGCCTTaGGAGGCTAACCTGCAAGCT | + |
|
Preference number: 5 (lower is better) Translates to: SINKYQASTVDRLYTGRGAMVLP*EANLQA Trigger: AGCTTGCAGGTTAGCCTCCAAAGGCAAGACCATGGC...CCCTCTCCCAGTATAAAGTCGGTCTACAGTGGATGCTTGGTATTTGTTGATGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045905.15 |
||
| CDS TCA 90 bp | ATATATGCTTCCTTTCAGAGGGCCAATGTAAAGAACATCGGTGCCTaGTCCAGGCATGATAAGAGGTCCTTCCAGCTCAAGCGCTTCGTC | + |
|
Preference number: 5 (lower is better) Translates to: IYASFQRANVKNIGA*SRHDKRSFQLKRFV Trigger: GACGAAGCGCTTGAGCTGGAAGGACCTCTTATCATGCCTGGATCAGGCACCGATGTTCTTTACATTGGCCCTCTGAAAGGAAGCATATAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150660.3 |
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| CDS GCA 90 bp | AATCAGGCTCATCTGGGCTACATTTTGATGGGCCTCCAAGATCCGTaGTGTTATCTGTTTGCTCTTATACTTCTTCAGGTACCGCGGGGA | + |
|
Preference number: 5 (lower is better) Translates to: NQAHLGYILMGLQDP*CYLFALILLQVPRG Trigger: TCCCCGCGGTACCTGAAGAAGTATAAGAGCAAACAGATAACAGCACGGATCTTGGAGGCCCATCAAAATGTAGCCCAGATGAGCCTGATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045905.15 |
||
| CDS-3UTR CAA 90 bp | GCAGATGTAATAGCGCAACAGACTAGAACACAGCCGGTCCAGGCTGTAGTTAAGTGTCACCCAGAATTGTaGATGTTTTCCCGCCTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: ADVIAQQTRTQPVQAVVKCHPEL*MFSRLP Trigger: TGGAAGGCGGGAAAACATCAACAATTCTGGGTGACA...CTTAACTACAGCCTGGACCGGCTGTGTTCTAGTCTGTTGCGCTATTACATCTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045905.15 |
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| CDS-3UTR CAA 90 bp | CTAACTAGCACCAACGCAGATGTAATAGCGCAACAGACTAGAACACAGCCGGTCGGTCTTTCGCACGAGTaGAGAGAAATATGTAACCAC | + |
|
Preference number: 5 (lower is better) Translates to: LTSTNADVIAQQTRTQPVGLSHE*REICNH Trigger: GTGGTTACATATTTCTCTCAACTCGTGCGAAAGACC...GACCGGCTGTGTTCTAGTCTGTTGCGCTATTACATCTGCGTTGGTGCTAGTTAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045905.15 |
||
| CDS-3UTR CAA 90 bp | CCAAGCATCCACTGTAGACCGACTTTATACTGGGAGAGGGGATTAACTGGGTACTCCGACCAATCTTTTTaGACATCGAGTTTTTCCACC | + |
|
Preference number: 5 (lower is better) Translates to: PSIHCRPTLYWERGLTGYSDQSF*TSSFST Trigger: GGTGGAAAAACTCGATGTCAAAAAAGATTGGTCGGA...GTACCCAGTTAATCCCCTCTCCCAGTATAAAGTCGGTCTACAGTGGATGCTTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000045905.15 |
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| CDS-3UTR CAA 90 bp | TATATGTATGCCCTGGGTGGCTTGGTAGATGGCTTGTTTCTTAGTTTGGTTACTTTCACATACTTCATGTaGGGAAGCTGCAGGCGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: YMYALGGLVDGLFLSLVTFTYFM*GSCRRS Trigger: GCTCCGCCTGCAGCTTCCCAACATGAAGTATGTGAA...AGTAACCAAACTAAGAAACAAGCCATCTACCAAGCCACCCAGGGCATACATATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045905.15 |
||
| CDS-3UTR CAA 90 bp | AAGGGCATCACGGCAAGTCACGAGCATCATGAAGTCATTCGTAATTTAGCAGATATGTCAGACACAGCCTaGAAGACTCGGTCAGAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: KGITASHEHHEVIRNLADMSDTA*KTRSEK Trigger: CTTCTCTGACCGAGTCTTCAAGGCTGTGTCTGACAT...ATCTGCTAAATTACGAATGACTTCATGATGCTCGTGACTTGCCGTGATGCCCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045905.15 |
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| CDS-3UTR CAA 90 bp | AACTGGGTACCAGGAGCAGGGTACTTTAAAAGAAGGCATCAATTAAACACAAACCATCTGGGCTACATTTaGATGGGCCTCCAAGATCCG | + |
|
Preference number: 5 (lower is better) Translates to: NWVPGAGYFKRRHQLNTNHLGYI*MGLQDP Trigger: CGGATCTTGGAGGCCCATCAAAATGTAGCCCAGATG...GTTTGTGTTTAATTGATGCCTTCTTTTAAAGTACCCTGCTCCTGGTACCCAGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045905.15 |
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| CDS TCA 90 bp | ATCAAGAAGAGCTTGAGGCTTGAACATTTTTGCCAGTATTTCTGGTaGTGTTACTGGCTGACTGACAGCAAGTATCCCAGGATTGCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: IKKSLRLEHFCQYFW*CYWLTDSKYPRIAF Trigger: GAAGGCAATCCTGGGATACTTGCTGTCAGTCAGCCAGTAACATCACCAGAAATACTGGCAAAAATGTTCAAGCCTCAAGCTCTTCTTGAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000045905.15 ENSMUST00000141424.2 ENSMUST00000150660.3 |
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| CDS-3UTR CAA 90 bp | AAGGCTGCATATCTTAGGCAGATAGTGAGTATGCTGGTGAATACTAAGAGTACTCAAACCAGGCAGAAGTaGGTGACAAAGGGCTTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: KAAYLRQIVSMLVNTKSTQTRQK*VTKGFH Trigger: ATGGAAGCCCTTTGTCACCAACTTCTGCCTGGTTTG...AGTACTCTTAGTATTCACCAGCATACTCACTATCTGCCTAAGATATGCAGCCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045905.15 |
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| CDS-3UTR CAA 90 bp | AACTGGGTACCAGGAGCAGGGTACTTTAAAAGAAGGCATCAATTAAACACAAACGAGATGGACGTGTCTTaGAAAGTGCACCAGTACTGC | + |
|
Preference number: 5 (lower is better) Translates to: NWVPGAGYFKRRHQLNTNEMDVS*KVHQYC Trigger: GCAGTACTGGTGCACTTTCAAAGACACGTCCATCTC...GTTTGTGTTTAATTGATGCCTTCTTTTAAAGTACCCTGCTCCTGGTACCCAGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045905.15 |
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| CDS-3UTR CAA 90 bp | AGCATCAACAAATACCAAGCATCCACTGTAGACCGACTTTATACTGGGAGAGGGCGTGCTGTTATCTGTTaGCTCTTATACTTCTTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: SINKYQASTVDRLYTGRGRAVIC*LLYFFR Trigger: CCTGAAGAAGTATAAGAGCAAACAGATAACAGCACG...CCCTCTCCCAGTATAAAGTCGGTCTACAGTGGATGCTTGGTATTTGTTGATGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045905.15 |
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| CDS-3UTR CAA 90 bp | GCAGATGTAATAGCGCAACAGACTAGAACACAGCCGGTCCAGGCTGTAGTTAAGATCCGAATCAACCTGTaGTATGCAATTCCAATAAGT | + |
|
Preference number: 5 (lower is better) Translates to: ADVIAQQTRTQPVQAVVKIRINL*YAIPIS Trigger: ACTTATTGGAATTGCATACAACAGGTTGATTCGGAT...CTTAACTACAGCCTGGACCGGCTGTGTTCTAGTCTGTTGCGCTATTACATCTGC 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045905.15 |
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| CDS-3UTR CAA 90 bp | GTACCAGGAGCAGGGTACTTTAAAAGAAGGCATCAATTAAACACAAACACATGCTTCCACTGCTTCATGTaGCTGAACCGCCAGGTTTTG | + |
|
Preference number: 5 (lower is better) Translates to: VPGAGYFKRRHQLNTNTCFHCFM*LNRQVL Trigger: CAAAACCTGGCGGTTCAGCAACATGAAGCAGTGGAA...GCATGTGTTTGTGTTTAATTGATGCCTTCTTTTAAAGTACCCTGCTCCTGGTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045905.15 |
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| CDS-3UTR CAA 90 bp | TATATGTATGCCCTGGGTGGCTTGGTAGATGGCTTGTTTCTTAGTTTGGTTACTTCTACAGTGACCATCTaGATCTCCCAGTTGACATTC | + |
|
Preference number: 5 (lower is better) Translates to: YMYALGGLVDGLFLSLVTSTVTI*ISQLTF Trigger: GAATGTCAACTGGGAGATCAAGATGGTCACTGTAGA...AGTAACCAAACTAAGAAACAAGCCATCTACCAAGCCACCCAGGGCATACATATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045905.15 |
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| CDS TCA 90 bp | GAATCTAGCCACCCTTGGTTGGTTTTTGCTTTATCAAGAAGAGCTTaGGGCTTGAACATTTTTGCCAGTATTTCTGGTGATGTTACTGGC | + |
|
Preference number: 5 (lower is better) Translates to: ESSHPWLVFALSRRA*GLNIFASISGDVTG Trigger: GCCAGTAACATCACCAGAAATACTGGCAAAAATGTTCAAGCCTCAAGCTCTTCTTGATAAAGCAAAAACCAACCAAGGGTGGCTAGATTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000045905.15 ENSMUST00000141424.2 |
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| CDS TCA 90 bp | AGCGTCGTAAGTAGGGGTCATTGTTTTACTATAAAGTCCCGGGCTTaGATATATGCTTCCAGTTTCAATTTGTCTTATGGATGCTCTAGG | + |
|
Preference number: 5 (lower is better) Translates to: SVVSRGHCFTIKSRA*IYASSFNLSYGCSR Trigger: CCTAGAGCATCCATAAGACAAATTGAAACTGGAAGCATATATTCAAGCCCGGGACTTTATAGTAAAACAATGACCCCTACTTACGACGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000141424.2 |
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| CDS-3UTR CAA 90 bp | AACTGGGTACCAGGAGCAGGGTACTTTAAAAGAAGGCATCAATTAAACACAAACTATAAAGTCCCGGGCTaGAATATATGCTTCCTGATC | + |
|
Preference number: 5 (lower is better) Translates to: NWVPGAGYFKRRHQLNTNYKVPG*NICFLI Trigger: GATCAGGAAGCATATATTCAAGCCCGGGACTTTATA...GTTTGTGTTTAATTGATGCCTTCTTTTAAAGTACCCTGCTCCTGGTACCCAGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045905.15 |
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| CDS-3UTR CAA 90 bp | AAGGCTGCATATCTTAGGCAGATAGTGAGTATGCTGGTGAATACTAAGAGTACTTCTAGCCACCCTTGGTaGGTTTTTGCTTTATCAAGA | + |
|
Preference number: 5 (lower is better) Translates to: KAAYLRQIVSMLVNTKSTSSHPW*VFALSR Trigger: TCTTGATAAAGCAAAAACCAACCAAGGGTGGCTAGA...AGTACTCTTAGTATTCACCAGCATACTCACTATCTGCCTAAGATATGCAGCCTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045905.15 |
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| CDS-3UTR CAA 90 bp | AAGGCTGCATATCTTAGGCAGATAGTGAGTATGCTGGTGAATACTAAGAGTACTTCAGGGTGTCTTATATaGAAAGTCTTGCAGATGTCA | + |
|
Preference number: 5 (lower is better) Translates to: KAAYLRQIVSMLVNTKSTSGCLI*KVLQMS Trigger: TGACATCTGCAAGACTTTCAATATAAGACACCCTGA...AGTACTCTTAGTATTCACCAGCATACTCACTATCTGCCTAAGATATGCAGCCTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045905.15 |
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| CDS-3UTR CAA 90 bp | TATATGTATGCCCTGGGTGGCTTGGTAGATGGCTTGTTTCTTAGTTTGGTTACTTTTATCAAGAAGAGCTaGAGGCTTGAACATTTTTGC | + |
|
Preference number: 5 (lower is better) Translates to: YMYALGGLVDGLFLSLVTFIKKS*RLEHFC Trigger: GCAAAAATGTTCAAGCCTCAAGCTCTTCTTGATAAA...AGTAACCAAACTAAGAAACAAGCCATCTACCAAGCCACCCAGGGCATACATATA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045905.15 |
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| CDS CCA 72 bp | GACACCAGACACTCGGGGTTGACGTCGGTTGTGATCTaGTCAGGGATCAGCTGGGGGTCTGGGTTCAGATGC | + |
|
Preference number: 6 (lower is better) Translates to: DTRHSGLTSVVI*SGISWGSGFRC Trigger: GCATCTGAACCCAGACCCCCAGCTGATCCCTGACCAGATCACAACCGACGTCAACCCCGAGTGTCTGGTGTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045905.15 |
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| CDS CCA 72 bp | GGGTTGACGTCGGTTGTGATCTGGTCAGGGATCAGCTaGGGGTCTGGGTTCAGATGCTGCATTTTCAGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: GLTSVVIWSGIS*GSGFRCCIFRK Trigger: CTTCCTGAAAATGCAGCATCTGAACCCAGACCCCCAGCTGATCCCTGACCAGATCACAACCGACGTCAACCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045905.15 |
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| CDS GCA 72 bp | GAGGCTAACCTGCAAGCTGCCATCCAGTGCGCGTACTaGTTCTCGTTATCACAGCGAAGCCAGATCTCATTC | + |
|
Preference number: 6 (lower is better) Translates to: EANLQAAIQCAY*FSLSQRSQISF Trigger: GAATGAGATCTGGCTTCGCTGTGATAACGAGAAGCAGTACGCGCACTGGATGGCAGCTTGCAGGTTAGCCTC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045905.15 |
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| CDS GCA 72 bp | TTCACTTTCACCTTCACATACTTCATGTTGGGAAGCTaGAGGCGGAGCAGTTTGTGCTGCGGGGTGAACTGG | + |
|
Preference number: 6 (lower is better) Translates to: FTFTFTYFMLGS*RRSSLCCGVNW Trigger: CCAGTTCACCCCGCAGCACAAACTGCTCCGCCTGCAGCTTCCCAACATGAAGTATGTGAAGGTGAAAGTGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045905.15 ENSMUST00000150660.3 |
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| CDS CCA 72 bp | CAGAGAAGTTCACTTTCACCTTCACATACTTCATGTTaGGAAGCTGCAGGCGGAGCAGTTTGTGCTGCGGGG | + |
|
Preference number: 6 (lower is better) Translates to: QRSSLSPSHTSC*EAAGGAVCAAG Trigger: CCCCGCAGCACAAACTGCTCCGCCTGCAGCTTCCCAACATGAAGTATGTGAAGGTGAAAGTGAACTTCTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045905.15 ENSMUST00000150660.3 |
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| CDS CAA 72 bp | CTTCTGACAGGGCACTGTCACCAAACCAGGCAGAAGTaGGTGACAAAGGGCTTCCATCATGAGCGTCGTAAG | + |
|
Preference number: 6 (lower is better) Translates to: LLTGHCHQTRQK*VTKGFHHERRK Trigger: CTTACGACGCTCATGATGGAAGCCCTTTGTCACCAACTTCTGCCTGGTTTGGTGACAGTGCCCTGTCAGAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045905.15 ENSMUST00000141424.2 ENSMUST00000150660.3 |
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| CDS CAA 90 bp | AAGACTCGGTCAGAGAAGTTCACTTTCACCTTCACATACTTCATGTaGGGAAGCTGCAGGCGGAGCAGTTTGTGCTGCGGGGTGAACTGG | + |
|
Preference number: 6 (lower is better) Translates to: KTRSEKFTFTFTYFM*GSCRRSSLCCGVNW Trigger: CCAGTTCACCCCGCAGCACAAACTGCTCCGCCTGCAGCTTCCCAACATGAAGTATGTGAAGGTGAAAGTGAACTTCTCTGACCGAGTCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045905.15 ENSMUST00000150660.3 |
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| CDS GCA 72 bp | AATCGGAGCAGCAAGGCCTCGTTCTCCTTCACATCTTaGTCCATGAGAGATCTTGAGGAATCTAGCCACCCT | + |
|
Preference number: 6 (lower is better) Translates to: NRSSKASFSFTS*SMRDLEESSHP Trigger: AGGGTGGCTAGATTCCTCAAGATCTCTCATGGAGCAAGATGTGAAGGAGAACGAGGCCTTGCTGCTCCGATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045905.15 ENSMUST00000141424.2 |
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| CDS CCA 72 bp | GTCGGTTGTGATCTGGTCAGGGATCAGCTGGGGGTCTaGGTTCAGATGCTGCATTTTCAGGAAGGAAAGAAT | + |
|
Preference number: 6 (lower is better) Translates to: VGCDLVRDQLGV*VQMLHFQEGKN Trigger: ATTCTTTCCTTCCTGAAAATGCAGCATCTGAACCCAGACCCCCAGCTGATCCCTGACCAGATCACAACCGAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045905.15 |
||
| CDS TCA 72 bp | ATTCGTGGACCACCTTGCAGTCTACTTCGGTACAGATaGAGGACAACCGGACCTCATCTGCAAACTCTACAG | + |
|
Preference number: 6 (lower is better) Translates to: IRGPPCSLLRYR*RTTGPHLQTLQ Trigger: CTGTAGAGTTTGCAGATGAGGTCCGGTTGTCCTTCATCTGTACCGAAGTAGACTGCAAGGTGGTCCACGAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045905.15 |
||
| CDS TCA 72 bp | TCCTTTCAGAGGGCCAATGTAAAGAACATCGGTGCCTaGTCCAGGCATGATAAGAGGTCCTTCCAGCTCAAG | + |
|
Preference number: 6 (lower is better) Translates to: SFQRANVKNIGA*SRHDKRSFQLK Trigger: CTTGAGCTGGAAGGACCTCTTATCATGCCTGGATCAGGCACCGATGTTCTTTACATTGGCCCTCTGAAAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150660.3 |
||
| CDS TCA 72 bp | CACCCAGAATTGTTGATGTTTTCCCGCCTTCCAAAGTaGTCTCCAGGTCAGAAAGGGCAGCGTCAACTTCAT | + |
|
Preference number: 6 (lower is better) Translates to: HPELLMFSRLPK*SPGQKGQRQLH Trigger: ATGAAGTTGACGCTGCCCTTTCTGACCTGGAGATCACTTTGGAAGGCGGGAAAACATCAACAATTCTGGGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045905.15 |
||
| CDS GCA 72 bp | CAGGAGATGGACGTGTCTTTGAAAGTGCACCAGTACTaGTTGTACCCCTTTAAAGTCAGCTTCTTCGGCTTG | + |
|
Preference number: 6 (lower is better) Translates to: QEMDVSLKVHQY*LYPFKVSFFGL Trigger: CAAGCCGAAGAAGCTGACTTTAAAGGGGTACAAGCAGTACTGGTGCACTTTCAAAGACACGTCCATCTCCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045905.15 |
||
| CDS CAA 72 bp | CATCTTGGCTTCAATCAGGCTCATCTGGGCTACATTTaGATGGGCCTCCAAGATCCGTGCTGTTATCTGTTT | + |
|
Preference number: 6 (lower is better) Translates to: HLGFNQAHLGYI*MGLQDPCCYLF Trigger: AAACAGATAACAGCACGGATCTTGGAGGCCCATCAAAATGTAGCCCAGATGAGCCTGATTGAAGCCAAGATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045905.15 |
||
| CDS TCA 72 bp | AGCTTGAGGCTTGAACATTTTTGCCAGTATTTCTGGTaGTGTTACTGGCTGACTGACAGCAAGTATCCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: SLRLEHFCQYFW*CYWLTDSKYPR Trigger: CCTGGGATACTTGCTGTCAGTCAGCCAGTAACATCACCAGAAATACTGGCAAAAATGTTCAAGCCTCAAGCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000045905.15 ENSMUST00000141424.2 ENSMUST00000150660.3 |
||
| CDS TCA 72 bp | CTTTCGCACGAGTTGAGAGAAATATGTAACCACCAATaGATTCGTGGACCACCTTGCAGTCTACTTCGGTAC | + |
|
Preference number: 6 (lower is better) Translates to: LSHELREICNHQ*IRGPPCSLLRY Trigger: GTACCGAAGTAGACTGCAAGGTGGTCCACGAATTCATTGGTGGTTACATATTTCTCTCAACTCGTGCGAAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045905.15 |
||
| CDS CAA 72 bp | GAGATGGACGTGTCTTTGAAAGTGCACCAGTACTGCTaGTACCCCTTTAAAGTCAGCTTCTTCGGCTTGAAA | + |
|
Preference number: 6 (lower is better) Translates to: EMDVSLKVHQYC*YPFKVSFFGLK Trigger: TTTCAAGCCGAAGAAGCTGACTTTAAAGGGGTACAAGCAGTACTGGTGCACTTTCAAAGACACGTCCATCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045905.15 |
||
| CDS TCA 72 bp | AACATTTTTGCCAGTATTTCTGGTGATGTTACTGGCTaGCTGACAGCAAGTATCCCAGGATTGCCTTCTGAC | + |
|
Preference number: 6 (lower is better) Translates to: NIFASISGDVTG*LTASIPGLPSD Trigger: GTCAGAAGGCAATCCTGGGATACTTGCTGTCAGTCAGCCAGTAACATCACCAGAAATACTGGCAAAAATGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000045905.15 ENSMUST00000141424.2 ENSMUST00000150660.3 |
||
| CDS GCA 72 bp | CATCTGGGCTACATTTTGATGGGCCTCCAAGATCCGTaGTGTTATCTGTTTGCTCTTATACTTCTTCAGGTA | + |
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Preference number: 6 (lower is better) Translates to: HLGYILMGLQDP*CYLFALILLQV Trigger: TACCTGAAGAAGTATAAGAGCAAACAGATAACAGCACGGATCTTGGAGGCCCATCAAAATGTAGCCCAGATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045905.15 |
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| CDS CAA 90 bp | TCAGGGTGTCTTATATTGAAAGTCTTGCAGATGTCAGACACAGCCTaGAAGACTCGGTCAGAGAAGTTCACTTTCACCTTCACATACTTC | + |
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Preference number: 6 (lower is better) Translates to: SGCLILKVLQMSDTA*KTRSEKFTFTFTYF Trigger: GAAGTATGTGAAGGTGAAAGTGAACTTCTCTGACCGAGTCTTCAAGGCTGTGTCTGACATCTGCAAGACTTTCAATATAAGACACCCTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045905.15 ENSMUST00000150660.3 |
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| CDS CAA 90 bp | AATGAATCTCATCTTGGCTTCAATCAGGCTCATCTGGGCTACATTTaGATGGGCCTCCAAGATCCGTGCTGTTATCTGTTTGCTCTTATA | + |
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Preference number: 6 (lower is better) Translates to: NESHLGFNQAHLGYI*MGLQDPCCYLFALI Trigger: TATAAGAGCAAACAGATAACAGCACGGATCTTGGAGGCCCATCAAAATGTAGCCCAGATGAGCCTGATTGAAGCCAAGATGAGATTCATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045905.15 |
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| CDS CAA 72 bp | CTTATATTGAAAGTCTTGCAGATGTCAGACACAGCCTaGAAGACTCGGTCAGAGAAGTTCACTTTCACCTTC | + |
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Preference number: 6 (lower is better) Translates to: LILKVLQMSDTA*KTRSEKFTFTF Trigger: GAAGGTGAAAGTGAACTTCTCTGACCGAGTCTTCAAGGCTGTGTCTGACATCTGCAAGACTTTCAATATAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045905.15 ENSMUST00000150660.3 |
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| CDS TCA 72 bp | AGTAGGGGTCATTGTTTTACTATAAAGTCCCGGGCTTaGATATATGCTTCCTTTCAGAGGGCCAATGTAAAG | + |
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Preference number: 6 (lower is better) Translates to: SRGHCFTIKSRA*IYASFQRANVK Trigger: CTTTACATTGGCCCTCTGAAAGGAAGCATATATTCAAGCCCGGGACTTTATAGTAAAACAATGACCCCTACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000150660.3 |
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| CDS TCA 72 bp | CACCCTTGGTTGGTTTTTGCTTTATCAAGAAGAGCTTaGGGCTTGAACATTTTTGCCAGTATTTCTGGTGAT | + |
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Preference number: 6 (lower is better) Translates to: HPWLVFALSRRA*GLNIFASISGD Trigger: ATCACCAGAAATACTGGCAAAAATGTTCAAGCCTCAAGCTCTTCTTGATAAAGCAAAAACCAACCAAGGGTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000045905.15 ENSMUST00000141424.2 |
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| CDS TCA 72 bp | GGTTGGTTTTTGCTTTATCAAGAAGAGCTTGAGGCTTaGACATTTTTGCCAGTATTTCTGGTGATGTTACTG | + |
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Preference number: 6 (lower is better) Translates to: GWFLLYQEELEA*TFLPVFLVMLL Trigger: CAGTAACATCACCAGAAATACTGGCAAAAATGTTCAAGCCTCAAGCTCTTCTTGATAAAGCAAAAACCAACC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000045905.15 ENSMUST00000141424.2 |
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| CDS TCA 72 bp | AGTAGGGGTCATTGTTTTACTATAAAGTCCCGGGCTTaGATATATGCTTCCAGTTTCAATTTGTCTTATGGA | + |
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Preference number: 6 (lower is better) Translates to: SRGHCFTIKSRA*IYASSFNLSYG Trigger: TCCATAAGACAAATTGAAACTGGAAGCATATATTCAAGCCCGGGACTTTATAGTAAAACAATGACCCCTACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000141424.2 |
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