Pregenerated sensors for FERMT1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027356Ensembl transcript IDs: ENSMUST00000038280.5
Found 191 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTCTGCTCACTGCTGACTTACCGTGAGGCATACAAGCAGGTCAGCTaGCGGCTAGCACTTACATGTGCCTGCAAAGCCATGTTGCTGGGG | + |
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Preference number: 1 (lower is better) Translates to: LCSLLTYREAYKQVS*RLALTCACKAMLLG Trigger: CCCCAGCAACATGGCTTTGCAGGCACATGTAAGTGCTAGCCGGCAGCTGACCTGCTTGTATGCCTCACGGTAAGTCAGCAGTGAGCAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
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| 3UTR CCA 90 bp | GCCTGTTTTCTTGAGACCCAGCCCAGGACCAAATCGACTGAGTCTTaGATCTTGGCTGAGACTGGGCTCCCACTTATCCCTTCAGCACCT | + |
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Preference number: 1 (lower is better) Translates to: ACFLETQPRTKSTES*ILAETGLPLIPSAP Trigger: AGGTGCTGAAGGGATAAGTGGGAGCCCAGTCTCAGCCAAGATCCAAGACTCAGTCGATTTGGTCCTGGGCTGGGTCTCAAGAAAACAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
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| 3UTR TCA 90 bp | AGCCTGAGGCACAGTAAGGAGAGGGATGTGTTCAGTGCGCTCAGATaGGGCAGGACCTGGGCATCTGATGGTAAGCATACATTGTGTTGC | + |
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Preference number: 1 (lower is better) Translates to: SLRHSKERDVFSALR*GRTWASDGKHTLCC Trigger: GCAACACAATGTATGCTTACCATCAGATGCCCAGGTCCTGCCTCATCTGAGCGCACTGAACACATCCCTCTCCTTACTGTGCCTCAGGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
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| 3UTR CCA 90 bp | TTCTTGAGACCCAGCCCAGGACCAAATCGACTGAGTCTTGGATCTTaGCTGAGACTGGGCTCCCACTTATCCCTTCAGCACCTGTGTCTT | + |
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Preference number: 1 (lower is better) Translates to: FLRPSPGPNRLSLGS*LRLGSHLSLQHLCL Trigger: AAGACACAGGTGCTGAAGGGATAAGTGGGAGCCCAGTCTCAGCCAAGATCCAAGACTCAGTCGATTTGGTCCTGGGCTGGGTCTCAAGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
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| 3UTR TCA 90 bp | GGCCAGGACAGTCTTCTGAGAATTGCAGAACTCTCCCTTCCCAGGTaGCCTTGTTGGGAAACAAAGCAACAGCTGAGGCTTGAAGGTCTC | + |
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Preference number: 1 (lower is better) Translates to: GQDSLLRIAELSLPR*PCWETKQQLRLEGL Trigger: GAGACCTTCAAGCCTCAGCTGTTGCTTTGTTTCCCAACAAGGTCACCTGGGAAGGGAGAGTTCTGCAATTCTCAGAAGACTGTCCTGGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
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| 3UTR TCA 90 bp | GGTTCTTCTGGCTCATGTCTGTGGTCTCAGGCCAGGACAGTCTTCTaGGAATTGCAGAACTCTCCCTTCCCAGGTGACCTTGTTGGGAAA | + |
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Preference number: 1 (lower is better) Translates to: GSSGSCLWSQARTVF*ELQNSPFPGDLVGK Trigger: TTTCCCAACAAGGTCACCTGGGAAGGGAGAGTTCTGCAATTCTCAGAAGACTGTCCTGGCCTGAGACCACAGACATGAGCCAGAAGAACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
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| 3UTR GCA 90 bp | CTGGCTCATGTCTGTGGTCTCAGGCCAGGACAGTCTTCTGAGAATTaGAGAACTCTCCCTTCCCAGGTGACCTTGTTGGGAAACAAAGCA | + |
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Preference number: 1 (lower is better) Translates to: LAHVCGLRPGQSSEN*RTLPSQVTLLGNKA Trigger: TGCTTTGTTTCCCAACAAGGTCACCTGGGAAGGGAGAGTTCTGCAATTCTCAGAAGACTGTCCTGGCCTGAGACCACAGACATGAGCCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
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| 3UTR GCA 90 bp | ATGGAGCCTTGGCTGGCCTCAGACTCACAGATGTCTGCTTGCATCTaGCTCCTGAGTTCTGGGATTAAAGGCATGCACACTGTGTGTATA | + |
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Preference number: 1 (lower is better) Translates to: MEPWLASDSQMSACI*LLSSGIKGMHTVCI Trigger: TATACACACAGTGTGCATGCCTTTAATCCCAGAACTCAGGAGGCAGATGCAAGCAGACATCTGTGAGTCTGAGGCCAGCCAAGGCTCCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
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| 3UTR CCA 90 bp | TGGACTCTGAAACAGATTTGCCTGCCTTCTCTTACTTGGCTTGGTTaGCTGGAACGGAGACCTGAATGGACTTGGAATCCTGCCAGGGTT | + |
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Preference number: 1 (lower is better) Translates to: WTLKQICLPSLTWLG*LERRPEWTWNPARV Trigger: AACCCTGGCAGGATTCCAAGTCCATTCAGGTCTCCGTTCCAGCCAACCAAGCCAAGTAAGAGAAGGCAGGCAAATCTGTTTCAGAGTCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
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| 3UTR TCA 90 bp | ACTCAGCTGAGGTCCTCCGTAAGAGCAGCAAGCCCTCTTAACTGCTaGCCTATATCTTTCCAGCTCTGTGGAAGTTGCTTTTGGTTAACA | + |
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Preference number: 1 (lower is better) Translates to: TQLRSSVRAASPLNC*PISFQLCGSCFWLT Trigger: TGTTAACCAAAAGCAACTTCCACAGAGCTGGAAAGATATAGGTCAGCAGTTAAGAGGGCTTGCTGCTCTTACGGAGGACCTCAGCTGAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
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| 3UTR TCA 90 bp | AGTTTTACAGAAATCTCAGCCAACCATACAAAGCAAAGGAGGGGCTaGCCTGAAGGCCTGGTCTGGCATTCTAGGGAAGCTGAATTCTCA | + |
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Preference number: 1 (lower is better) Translates to: SFTEISANHTKQRRG*PEGLVWHSREAEFS Trigger: TGAGAATTCAGCTTCCCTAGAATGCCAGACCAGGCCTTCAGGTCAGCCCCTCCTTTGCTTTGTATGGTTGGCTGAGATTTCTGTAAAACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
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| 3UTR CCA 90 bp | AGTGGGTATCTGGAAAGGCTAAAAGAAACCTCCAGAAGGTTCTTCTaGCTCATGTCTGTGGTCTCAGGCCAGGACAGTCTTCTGAGAATT | + |
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Preference number: 1 (lower is better) Translates to: SGYLERLKETSRRFF*LMSVVSGQDSLLRI Trigger: AATTCTCAGAAGACTGTCCTGGCCTGAGACCACAGACATGAGCCAGAAGAACCTTCTGGAGGTTTCTTTTAGCCTTTCCAGATACCCACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
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| 3UTR GCA 90 bp | AACCCTAAAACATGCCAGGTTCAAGGAAAGCTCTTGCTCTATCTGTaGAGTCTGAGTTCGTGTGGAAGGAGAAGGCTGTGTATCGACAAT | + |
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Preference number: 1 (lower is better) Translates to: NPKTCQVQGKLLLYL*SLSSCGRRRLCIDN Trigger: ATTGTCGATACACAGCCTTCTCCTTCCACACGAACTCAGACTGCACAGATAGAGCAAGAGCTTTCCTTGAACCTGGCATGTTTTAGGGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
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| 3UTR TCA 90 bp | AAACATGCCAGGTTCAAGGAAAGCTCTTGCTCTATCTGTGCAGTCTaGGTTCGTGTGGAAGGAGAAGGCTGTGTATCGACAATAGAAAAC | + |
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Preference number: 1 (lower is better) Translates to: KHARFKESSCSICAV*VRVEGEGCVSTIEN Trigger: GTTTTCTATTGTCGATACACAGCCTTCTCCTTCCACACGAACTCAGACTGCACAGATAGAGCAAGAGCTTTCCTTGAACCTGGCATGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
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| 3UTR TCA 90 bp | AGACCGGACATGACTTTAAAAATAGAACTTCAACATGGTGGACTCTaGAACAGATTTGCCTGCCTTCTCTTACTTGGCTTGGTTGGCTGG | + |
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Preference number: 1 (lower is better) Translates to: RPDMTLKIELQHGGL*NRFACLLLLGLVGW Trigger: CCAGCCAACCAAGCCAAGTAAGAGAAGGCAGGCAAATCTGTTTCAGAGTCCACCATGTTGAAGTTCTATTTTTAAAGTCATGTCCGGTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
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| 3UTR GCA 90 bp | AAGTTCTTGATGATGGGAACCAGATCTTCCAAATGCTTAAAGTATTaGCAACCAAAACTGAGCCCCAGGAATTCAGTGGGTATCTGGAAA | + |
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Preference number: 1 (lower is better) Translates to: KFLMMGTRSSKCLKY*QPKLSPRNSVGIWK Trigger: TTTCCAGATACCCACTGAATTCCTGGGGCTCAGTTTTGGTTGGCAATACTTTAAGCATTTGGAAGATCTGGTTCCCATCATCAAGAACTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
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| 3UTR CCA 90 bp | ATAACCCAGACCGGACATGACTTTAAAAATAGAACTTCAACATGGTaGACTCTGAAACAGATTTGCCTGCCTTCTCTTACTTGGCTTGGT | + |
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Preference number: 1 (lower is better) Translates to: ITQTGHDFKNRTSTW*TLKQICLPSLTWLG Trigger: ACCAAGCCAAGTAAGAGAAGGCAGGCAAATCTGTTTCAGAGTCCACCATGTTGAAGTTCTATTTTTAAAGTCATGTCCGGTCTGGGTTAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
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| 3UTR TCA 90 bp | AAAACAGCTCCCAAGAGTCTGTTATTGTCTTGTGATTTACAAAGCTaGAGGTGTTTAGGGAAAAATGGCAAGGATCATAGAGGCAGACTC | + |
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Preference number: 1 (lower is better) Translates to: KTAPKSLLLSCDLQS*RCLGKNGKDHRGRL Trigger: GAGTCTGCCTCTATGATCCTTGCCATTTTTCCCTAAACACCTTCAGCTTTGTAAATCACAAGACAATAACAGACTCTTGGGAGCTGTTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
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| 3UTR-3UTR GCA 90 bp | CAGCCCAGGACCAAATCGACTGAGTCTTGGATCTTGGCTGAGACTGGGCTCCCACCTGCAAAGCCATGTTaGTGGGGAGCCATGATGGGC | + |
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Preference number: 2 (lower is better) Translates to: QPRTKSTESWILAETGLPPAKPC*WGAMMG Trigger: GCCCATCATGGCTCCCCAGCAACATGGCTTTGCAGG...TGGGAGCCCAGTCTCAGCCAAGATCCAAGACTCAGTCGATTTGGTCCTGGGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
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| 3UTR-3UTR TCA 90 bp | ATCCATAGGGTACCAGCCCTCTCTCCCCTCCACCCACTTTATAGGAAAAGAAGCTTCAGTGCGCTCAGATaGGGCAGGACCTGGGCATCT | + |
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Preference number: 2 (lower is better) Translates to: IHRVPALSPLHPLYRKRSFSALR*GRTWAS Trigger: AGATGCCCAGGTCCTGCCTCATCTGAGCGCACTGAA...GCTTCTTTTCCTATAAAGTGGGTGGAGGGGAGAGAGGGCTGGTACCCTATGGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
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| 3UTR-3UTR GCA 90 bp | ATGGACTTGGAATCCTGCCAGGGTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGGAGCCCAGTCTACTaGTGGCAGCCTGAGGCACAG | + |
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Preference number: 2 (lower is better) Translates to: MDLESCQGLCVCVCVCVCRSPVY*WQPEAQ Trigger: CTGTGCCTCAGGCTGCCAGCAGTAGACTGGGCTCCT...ACACACACACACACACACACACACACACAAACCCTGGCAGGATTCCAAGTCCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
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| 3UTR-3UTR CCA 90 bp | TGGCTGGAACGGAGACCTGAATGGACTTGGAATCCTGCCAGGGTTTGTGTGTGTGCAAAGCCATGTTGCTaGGGAGCCATGATGGGCCTT | + |
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Preference number: 2 (lower is better) Translates to: WLERRPEWTWNPARVCVCAKPCC*GAMMGL Trigger: AAGGCCCATCATGGCTCCCCAGCAACATGGCTTTGC...ACACACACAAACCCTGGCAGGATTCCAAGTCCATTCAGGTCTCCGTTCCAGCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
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| 3UTR-3UTR TCA 90 bp | AAACCTCCAGAAGGTTCTTCTGGCTCATGTCTGTGGTCTCAGGCCAGGACAGTCCTCTCCCTTCCCAGGTaGCCTTGTTGGGAAACAAAG | + |
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Preference number: 2 (lower is better) Translates to: KPPEGSSGSCLWSQARTVLSLPR*PCWETK Trigger: CTTTGTTTCCCAACAAGGTCACCTGGGAAGGGAGAG...GACTGTCCTGGCCTGAGACCACAGACATGAGCCAGAAGAACCTTCTGGAGGTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
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| 3UTR-3UTR TCA 90 bp | AAACCTCCAGAAGGTTCTTCTGGCTCATGTCTGTGGTCTCAGGCCAGGACAGTCAAACAAAGCAACAGCTaGGGCTTGAAGGTCTCTGGG | + |
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Preference number: 2 (lower is better) Translates to: KPPEGSSGSCLWSQARTVKQSNS*GLKVSG Trigger: CCCAGAGACCTTCAAGCCTCAGCTGTTGCTTTGTTT...GACTGTCCTGGCCTGAGACCACAGACATGAGCCAGAAGAACCTTCTGGAGGTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
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| 3UTR-3UTR GCA 90 bp | TATCCCTTCAGCACCTGTGTCTTTAAGAAGGGCTTCAGTGTGTCTGTGGGATTCGAGGGATGTGTTCAGTaGGCTCAGATGAGGCAGGAC | + |
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Preference number: 2 (lower is better) Translates to: YPFSTCVFKKGFSVSVGFEGCVQ*AQMRQD Trigger: GTCCTGCCTCATCTGAGCGCACTGAACACATCCCTC...GAATCCCACAGACACACTGAAGCCCTTCTTAAAGACACAGGTGCTGAAGGGATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
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| 3UTR-3UTR GCA 90 bp | TGGCTGGAACGGAGACCTGAATGGACTTGGAATCCTGCCAGGGTTTGTGTGTGTGCTAGCACTTACATGTaGCTGCAAAGCCATGTTGCT | + |
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Preference number: 2 (lower is better) Translates to: WLERRPEWTWNPARVCVCASTYM*LQSHVA Trigger: AGCAACATGGCTTTGCAGGCACATGTAAGTGCTAGC...ACACACACAAACCCTGGCAGGATTCCAAGTCCATTCAGGTCTCCGTTCCAGCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
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| 3UTR-3UTR GCA 90 bp | AAACCTCCAGAAGGTTCTTCTGGCTCATGTCTGTGGTCTCAGGCCAGGACAGTCATGGACTTGGAATCCTaGCAGGGTTTGTGTGTGTGT | + |
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Preference number: 2 (lower is better) Translates to: KPPEGSSGSCLWSQARTVMDLES*QGLCVC Trigger: ACACACACACAAACCCTGGCAGGATTCCAAGTCCAT...GACTGTCCTGGCCTGAGACCACAGACATGAGCCAGAAGAACCTTCTGGAGGTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
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| 3UTR-3UTR TCA 90 bp | CTCAAAACCCACTCATTCCCTCCTACTGAAAAACCAGAACATGACATTCAGGCAGTTGCTGGGGAGCCATaGTGGGCCTTAGAGCATCCA | + |
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Preference number: 2 (lower is better) Translates to: LKTHSFPPTEKPEHDIQAVAGEP*WALEHP Trigger: TGGATGCTCTAAGGCCCATCATGGCTCCCCAGCAAC...TGCCTGAATGTCATGTTCTGGTTTTTCAGTAGGAGGGAATGAGTGGGTTTTGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
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| 3UTR-3UTR GCA 90 bp | TATCCCTTCAGCACCTGTGTCTTTAAGAAGGGCTTCAGTGTGTCTGTGGGATTCGCACTTACATGTGCCTaGAAAGCCATGTTGCTGGGG | + |
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Preference number: 2 (lower is better) Translates to: YPFSTCVFKKGFSVSVGFALTCA*KAMLLG Trigger: CCCCAGCAACATGGCTTTGCAGGCACATGTAAGTGC...GAATCCCACAGACACACTGAAGCCCTTCTTAAAGACACAGGTGCTGAAGGGATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
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| 3UTR-3UTR CCA 90 bp | ATGGACTTGGAATCCTGCCAGGGTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCTTCAGTGTGTCTGTaGGATTCTCTAGGAGTGGAG | + |
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Preference number: 2 (lower is better) Translates to: MDLESCQGLCVCVCVCVCASVCL*DSLGVE Trigger: CTCCACTCCTAGAGAATCCCACAGACACACTGAAGC...ACACACACACACACACACACACACACACAAACCCTGGCAGGATTCCAAGTCCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
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| 3UTR-3UTR TCA 90 bp | GCTCTATCTGTGCAGTCTGAGTTCGTGTGGAAGGAGAAGGCTGTGTATCGACAAATGTCAGCCATACTGTaGGGAACAACGGTTAGACCA | + |
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Preference number: 2 (lower is better) Translates to: ALSVQSEFVWKEKAVYRQMSAIL*GTTVRP Trigger: TGGTCTAACCGTTGTTCCTCACAGTATGGCTGACAT...TTGTCGATACACAGCCTTCTCCTTCCACACGAACTCAGACTGCACAGATAGAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
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| 3UTR-3UTR TCA 90 bp | AAGGAGGTCATTGTGACCAGGATTTGGAAGATCTGTCCAGGCTATAGCATGCAACTTGCATCTGCCTCCTaGGTTCTGGGATTAAAGGCA | + |
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Preference number: 2 (lower is better) Translates to: KEVIVTRIWKICPGYSMQLASAS*VLGLKA Trigger: TGCCTTTAATCCCAGAACTCAGGAGGCAGATGCAAG...TTGCATGCTATAGCCTGGACAGATCTTCCAAATCCTGGTCACAATGACCTCCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
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| 3UTR-3UTR GCA 90 bp | AGTTGCTTTTGGTTAACAGAGAACCAGGCCTGTTTTCTTGAGACCCAGCCCAGGAAGCATACATTGTGTTaGTCTGCAGCTACACACAGG | + |
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Preference number: 2 (lower is better) Translates to: SCFWLTENQACFLETQPRKHTLC*SAATHR Trigger: CCTGTGTGTAGCTGCAGAGCAACACAATGTATGCTT...CCTGGGCTGGGTCTCAAGAAAACAGGCCTGGTTCTCTGTTAACCAAAAGCAACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
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| 3UTR-3UTR GCA 90 bp | AAGGAGGTCATTGTGACCAGGATTTGGAAGATCTGTCCAGGCTATAGCATGCAAAAGACCCCTGTAACCTaGTCCTTCCCACTCATCTCT | + |
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Preference number: 2 (lower is better) Translates to: KEVIVTRIWKICPGYSMQKTPVT*SFPLIS Trigger: AGAGATGAGTGGGAAGGAGCAGGTTACAGGGGTCTT...TTGCATGCTATAGCCTGGACAGATCTTCCAAATCCTGGTCACAATGACCTCCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
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| 3UTR-3UTR CCA 90 bp | TGTTGGGAAACAAAGCAACAGCTGAGGCTTGAAGGTCTCTGGGCTCCATCCAAATGTGGAAGTTGCTTTTaGTTAACAGAGAACCAGGCC | + |
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Preference number: 2 (lower is better) Translates to: CWETKQQLRLEGLWAPSKCGSCF*LTENQA Trigger: GGCCTGGTTCTCTGTTAACCAAAAGCAACTTCCACA...TTTGGATGGAGCCCAGAGACCTTCAAGCCTCAGCTGTTGCTTTGTTTCCCAACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
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| 3UTR-3UTR TCA 90 bp | TTACTCAAAACCCACTCATTCCCTCCTACTGAAAAACCAGAACATGACATTCAGGCTGGAACGGAGACCTaGATGGACTTGGAATCCTGC | + |
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Preference number: 2 (lower is better) Translates to: LLKTHSFPPTEKPEHDIQAGTET*MDLESC Trigger: GCAGGATTCCAAGTCCATTCAGGTCTCCGTTCCAGC...CTGAATGTCATGTTCTGGTTTTTCAGTAGGAGGGAATGAGTGGGTTTTGAGTAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
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| 3UTR-3UTR GCA 90 bp | ATGGACTTGGAATCCTGCCAGGGTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCAGCTCTGTGGAAGTTaGTTTTGGTTAACAGAGAAC | + |
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Preference number: 2 (lower is better) Translates to: MDLESCQGLCVCVCVCVCQLCGS*FWLTEN Trigger: GTTCTCTGTTAACCAAAAGCAACTTCCACAGAGCTG...ACACACACACACACACACACACACACACAAACCCTGGCAGGATTCCAAGTCCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
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| 3UTR-3UTR CCA 90 bp | CTCAAAACCCACTCATTCCCTCCTACTGAAAAACCAGAACATGACATTCAGGCATTCTCTTACTTGGCTTaGTTGGCTGGAACGGAGACC | + |
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Preference number: 2 (lower is better) Translates to: LKTHSFPPTEKPEHDIQAFSYLA*LAGTET Trigger: GGTCTCCGTTCCAGCCAACCAAGCCAAGTAAGAGAA...TGCCTGAATGTCATGTTCTGGTTTTTCAGTAGGAGGGAATGAGTGGGTTTTGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
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| 3UTR-3UTR TCA 90 bp | TTACTCAAAACCCACTCATTCCCTCCTACTGAAAAACCAGAACATGACATTCAGAGCCCTCTTAACTGCTaGCCTATATCTTTCCAGCTC | + |
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Preference number: 2 (lower is better) Translates to: LLKTHSFPPTEKPEHDIQSPLNC*PISFQL Trigger: GAGCTGGAAAGATATAGGTCAGCAGTTAAGAGGGCT...CTGAATGTCATGTTCTGGTTTTTCAGTAGGAGGGAATGAGTGGGTTTTGAGTAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
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| 3UTR-3UTR TCA 90 bp | AAGCTGAATTCTCATGGGCAACATGTAATCAAGGTGACATGTAATCAAGGAGGTCAACATGGTGGACTCTaGAACAGATTTGCCTGCCTT | + |
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Preference number: 2 (lower is better) Translates to: KLNSHGQHVIKVTCNQGGQHGGL*NRFACL Trigger: AAGGCAGGCAAATCTGTTTCAGAGTCCACCATGTTG...ACCTCCTTGATTACATGTCACCTTGATTACATGTTGCCCATGAGAATTCAGCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
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| 3UTR-3UTR GCA 90 bp | AAGGAGGTCATTGTGACCAGGATTTGGAAGATCTGTCCAGGCTATAGCATGCAAACCAGATCTTCCAAATaGTTAAAGTATTGCCAACCA | + |
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Preference number: 2 (lower is better) Translates to: KEVIVTRIWKICPGYSMQTRSSK*LKYCQP Trigger: TGGTTGGCAATACTTTAAGCATTTGGAAGATCTGGT...TTGCATGCTATAGCCTGGACAGATCTTCCAAATCCTGGTCACAATGACCTCCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
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| 3UTR-3UTR CCA 90 bp | AAGGAGGTCATTGTGACCAGGATTTGGAAGATCTGTCCAGGCTATAGCATGCAAAATAGAACTTCAACATaGTGGACTCTGAAACAGATT | + |
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Preference number: 2 (lower is better) Translates to: KEVIVTRIWKICPGYSMQNRTST*WTLKQI Trigger: AATCTGTTTCAGAGTCCACCATGTTGAAGTTCTATT...TTGCATGCTATAGCCTGGACAGATCTTCCAAATCCTGGTCACAATGACCTCCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
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| 3UTR-3UTR CCA 90 bp | TTACTCAAAACCCACTCATTCCCTCCTACTGAAAAACCAGAACATGACATTCAGAGAACTTCAACATGGTaGACTCTGAAACAGATTTGC | + |
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Preference number: 2 (lower is better) Translates to: LLKTHSFPPTEKPEHDIQRTSTW*TLKQIC Trigger: GCAAATCTGTTTCAGAGTCCACCATGTTGAAGTTCT...CTGAATGTCATGTTCTGGTTTTTCAGTAGGAGGGAATGAGTGGGTTTTGAGTAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
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| 3UTR CAA 90 bp | GCACTTAACATACTTGACTGTGGAAAAACACCCCACATTAAGTTCTaGATGATGGGAACCAGATCTTCCAAATGCTTAAAGTATTGCCAA | + |
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Preference number: 2 (lower is better) Translates to: ALNILDCGKTPHIKF*MMGTRSSKCLKYCQ Trigger: TTGGCAATACTTTAAGCATTTGGAAGATCTGGTTCCCATCATCAAGAACTTAATGTGGGGTGTTTTTCCACAGTCAAGTATGTTAAGTGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
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| 3UTR TCA 72 bp | GAAAAGAAGCAGGAGCCCAGTCTACTGCTGGCAGCCTaGGGCACAGTAAGGAGAGGGATGTGTTCAGTGCGC | + |
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Preference number: 3 (lower is better) Translates to: EKKQEPSLLLAA*GTVRRGMCSVR Trigger: GCGCACTGAACACATCCCTCTCCTTACTGTGCCTCAGGCTGCCAGCAGTAGACTGGGCTCCTGCTTCTTTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
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| 3UTR TCA 72 bp | CCCTATTACCCCTCTCTGCTCACTGCTGACTTACCGTaGGGCATACAAGCAGGTCAGCTGCCGGCTAGCACT | + |
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Preference number: 3 (lower is better) Translates to: PYYPSLLTADLP*GIQAGQLPAST Trigger: AGTGCTAGCCGGCAGCTGACCTGCTTGTATGCCTCACGGTAAGTCAGCAGTGAGCAGAGAGGGGTAATAGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
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| 3UTR CCA 72 bp | CCCAGCCCAGGACCAAATCGACTGAGTCTTGGATCTTaGCTGAGACTGGGCTCCCACTTATCCCTTCAGCAC | + |
|
Preference number: 3 (lower is better) Translates to: PSPGPNRLSLGS*LRLGSHLSLQH Trigger: GTGCTGAAGGGATAAGTGGGAGCCCAGTCTCAGCCAAGATCCAAGACTCAGTCGATTTGGTCCTGGGCTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
||
| 3UTR-3UTR CAA 90 bp | GCTGGCCTCAGACTCACAGATGTCTGCTTGCATCTGCCTCCTGAGTTCTGGGATCCTGCCTTCTCTTACTaGGCTTGGTTGGCTGGAACG | + |
|
Preference number: 3 (lower is better) Translates to: AGLRLTDVCLHLPPEFWDPAFSY*AWLAGT Trigger: CGTTCCAGCCAACCAAGCCAAGTAAGAGAAGGCAGG...ATCCCAGAACTCAGGAGGCAGATGCAAGCAGACATCTGTGAGTCTGAGGCCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
||
| 3UTR CCA 72 bp | CTTGAGACCCAGCCCAGGACCAAATCGACTGAGTCTTaGATCTTGGCTGAGACTGGGCTCCCACTTATCCCT | + |
|
Preference number: 3 (lower is better) Translates to: LETQPRTKSTES*ILAETGLPLIP Trigger: AGGGATAAGTGGGAGCCCAGTCTCAGCCAAGATCCAAGACTCAGTCGATTTGGTCCTGGGCTGGGTCTCAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
||
| 3UTR TCA 72 bp | TGCTATGCATCCCTATTACCCCTCTCTGCTCACTGCTaGCTTACCGTGAGGCATACAAGCAGGTCAGCTGCC | + |
|
Preference number: 3 (lower is better) Translates to: CYASLLPLSAHC*LTVRHTSRSAA Trigger: GGCAGCTGACCTGCTTGTATGCCTCACGGTAAGTCAGCAGTGAGCAGAGAGGGGTAATAGGGATGCATAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
||
| 3UTR TCA 72 bp | GGCTCATGTCTGTGGTCTCAGGCCAGGACAGTCTTCTaGGAATTGCAGAACTCTCCCTTCCCAGGTGACCTT | + |
|
Preference number: 3 (lower is better) Translates to: GSCLWSQARTVF*ELQNSPFPGDL Trigger: AAGGTCACCTGGGAAGGGAGAGTTCTGCAATTCTCAGAAGACTGTCCTGGCCTGAGACCACAGACATGAGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
||
| 3UTR GCA 72 bp | GTCTGTGGTCTCAGGCCAGGACAGTCTTCTGAGAATTaGAGAACTCTCCCTTCCCAGGTGACCTTGTTGGGA | + |
|
Preference number: 3 (lower is better) Translates to: VCGLRPGQSSEN*RTLPSQVTLLG Trigger: TCCCAACAAGGTCACCTGGGAAGGGAGAGTTCTGCAATTCTCAGAAGACTGTCCTGGCCTGAGACCACAGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
||
| 3UTR CCA 72 bp | TGGCTTGGTTGGCTGGAACGGAGACCTGAATGGACTTaGAATCCTGCCAGGGTTTGTGTGTGTGTGTGTGTG | + |
|
Preference number: 3 (lower is better) Translates to: WLGWLERRPEWT*NPARVCVCVCV Trigger: CACACACACACACACACAAACCCTGGCAGGATTCCAAGTCCATTCAGGTCTCCGTTCCAGCCAACCAAGCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
||
| 3UTR TCA 72 bp | CACAGTAAGGAGAGGGATGTGTTCAGTGCGCTCAGATaGGGCAGGACCTGGGCATCTGATGGTAAGCATACA | + |
|
Preference number: 3 (lower is better) Translates to: HSKERDVFSALR*GRTWASDGKHT Trigger: TGTATGCTTACCATCAGATGCCCAGGTCCTGCCTCATCTGAGCGCACTGAACACATCCCTCTCCTTACTGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
||
| 3UTR TCA 72 bp | TTCCCAGGTGACCTTGTTGGGAAACAAAGCAACAGCTaGGGCTTGAAGGTCTCTGGGCTCCATCCAAAACCC | + |
|
Preference number: 3 (lower is better) Translates to: FPGDLVGKQSNS*GLKVSGLHPKP Trigger: GGGTTTTGGATGGAGCCCAGAGACCTTCAAGCCTCAGCTGTTGCTTTGTTTCCCAACAAGGTCACCTGGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
||
| 3UTR TCA 72 bp | GAAATCTCAGCCAACCATACAAAGCAAAGGAGGGGCTaGCCTGAAGGCCTGGTCTGGCATTCTAGGGAAGCT | + |
|
Preference number: 3 (lower is better) Translates to: EISANHTKQRRG*PEGLVWHSREA Trigger: AGCTTCCCTAGAATGCCAGACCAGGCCTTCAGGTCAGCCCCTCCTTTGCTTTGTATGGTTGGCTGAGATTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
||
| 3UTR GCA 72 bp | AGGACCTGGGCATCTGATGGTAAGCATACATTGTGTTaGTCTGCAGCTACACACAGGGAAAGCCACAGACCC | + |
|
Preference number: 3 (lower is better) Translates to: RTWASDGKHTLC*SAATHRESHRP Trigger: GGGTCTGTGGCTTTCCCTGTGTGTAGCTGCAGAGCAACACAATGTATGCTTACCATCAGATGCCCAGGTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
||
| 3UTR GCA 72 bp | TGGCTGGCCTCAGACTCACAGATGTCTGCTTGCATCTaGCTCCTGAGTTCTGGGATTAAAGGCATGCACACT | + |
|
Preference number: 3 (lower is better) Translates to: WLASDSQMSACI*LLSSGIKGMHT Trigger: AGTGTGCATGCCTTTAATCCCAGAACTCAGGAGGCAGATGCAAGCAGACATCTGTGAGTCTGAGGCCAGCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
||
| 3UTR CCA 72 bp | CTTACTTGGCTTGGTTGGCTGGAACGGAGACCTGAATaGACTTGGAATCCTGCCAGGGTTTGTGTGTGTGTG | + |
|
Preference number: 3 (lower is better) Translates to: LTWLGWLERRPE*TWNPARVCVCV Trigger: CACACACACACAAACCCTGGCAGGATTCCAAGTCCATTCAGGTCTCCGTTCCAGCCAACCAAGCCAAGTAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
||
| 3UTR CCA 72 bp | ACCATACAAAGCAAAGGAGGGGCTGACCTGAAGGCCTaGTCTGGCATTCTAGGGAAGCTGAATTCTCATGGG | + |
|
Preference number: 3 (lower is better) Translates to: TIQSKGGADLKA*SGILGKLNSHG Trigger: CCCATGAGAATTCAGCTTCCCTAGAATGCCAGACCAGGCCTTCAGGTCAGCCCCTCCTTTGCTTTGTATGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
||
| 3UTR-3UTR CAA 90 bp | CTCAAAACCCACTCATTCCCTCCTACTGAAAAACCAGAACATGACATTCAGGCAGCCTGCAAAGCCATGTaGCTGGGGAGCCATGATGGG | + |
|
Preference number: 3 (lower is better) Translates to: LKTHSFPPTEKPEHDIQAACKAM*LGSHDG Trigger: CCCATCATGGCTCCCCAGCAACATGGCTTTGCAGGC...TGCCTGAATGTCATGTTCTGGTTTTTCAGTAGGAGGGAATGAGTGGGTTTTGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
||
| 3UTR-3UTR CAA 90 bp | GCTGGCCTCAGACTCACAGATGTCTGCTTGCATCTGCCTCCTGAGTTCTGGGATGACTCTGAAACAGATTaGCCTGCCTTCTCTTACTTG | + |
|
Preference number: 3 (lower is better) Translates to: AGLRLTDVCLHLPPEFWDDSETD*PAFSYL Trigger: CAAGTAAGAGAAGGCAGGCAAATCTGTTTCAGAGTC...ATCCCAGAACTCAGGAGGCAGATGCAAGCAGACATCTGTGAGTCTGAGGCCAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
||
| 3UTR TCA 72 bp | TTCTCTTACTTGGCTTGGTTGGCTGGAACGGAGACCTaGATGGACTTGGAATCCTGCCAGGGTTTGTGTGTG | + |
|
Preference number: 3 (lower is better) Translates to: FSYLAWLAGTET*MDLESCQGLCV Trigger: CACACACAAACCCTGGCAGGATTCCAAGTCCATTCAGGTCTCCGTTCCAGCCAACCAAGCCAAGTAAGAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
||
| 3UTR GCA 72 bp | GGACCAGAGTGTGTGGAGCGAGATTTGTACTTGCTATaGATCCCTATTACCCCTCTCTGCTCACTGCTGACT | + |
|
Preference number: 3 (lower is better) Translates to: GPECVERDLYLL*IPITPLCSLLT Trigger: AGTCAGCAGTGAGCAGAGAGGGGTAATAGGGATGCATAGCAAGTACAAATCTCGCTCCACACACTCTGGTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
||
| 3UTR CCA 72 bp | GCACCTGTGTCTTTAAGAAGGGCTTCAGTGTGTCTGTaGGATTCTCTAGGAGTGGAGCTTCTCATGTCAGCC | + |
|
Preference number: 3 (lower is better) Translates to: APVSLRRASVCL*DSLGVELLMSA Trigger: GGCTGACATGAGAAGCTCCACTCCTAGAGAATCCCACAGACACACTGAAGCCCTTCTTAAAGACACAGGTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
||
| 3UTR CCA 72 bp | AGATTTGCCTGCCTTCTCTTACTTGGCTTGGTTGGCTaGAACGGAGACCTGAATGGACTTGGAATCCTGCCA | + |
|
Preference number: 3 (lower is better) Translates to: RFACLLLLGLVG*NGDLNGLGILP Trigger: TGGCAGGATTCCAAGTCCATTCAGGTCTCCGTTCCAGCCAACCAAGCCAAGTAAGAGAAGGCAGGCAAATCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
||
| 3UTR TCA 72 bp | TCTCTAGGAGTGGAGCTTCTCATGTCAGCCATACTGTaGGGAACAACGGTTAGACCAGATGGTGAGTGGTCA | + |
|
Preference number: 3 (lower is better) Translates to: SLGVELLMSAIL*GTTVRPDGEWS Trigger: TGACCACTCACCATCTGGTCTAACCGTTGTTCCTCACAGTATGGCTGACATGAGAAGCTCCACTCCTAGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
||
| 3UTR TCA 72 bp | CCTCAGACTCACAGATGTCTGCTTGCATCTGCCTCCTaGGTTCTGGGATTAAAGGCATGCACACTGTGTGTA | + |
|
Preference number: 3 (lower is better) Translates to: PQTHRCLLASAS*VLGLKACTLCV Trigger: TACACACAGTGTGCATGCCTTTAATCCCAGAACTCAGGAGGCAGATGCAAGCAGACATCTGTGAGTCTGAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
||
| 3UTR CCA 72 bp | TGGGAAACAAAGCAACAGCTGAGGCTTGAAGGTCTCTaGGCTCCATCCAAAACCCTAAAACATGCCAGGTTC | + |
|
Preference number: 3 (lower is better) Translates to: WETKQQLRLEGL*APSKTLKHARF Trigger: GAACCTGGCATGTTTTAGGGTTTTGGATGGAGCCCAGAGACCTTCAAGCCTCAGCTGTTGCTTTGTTTCCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
||
| 3UTR CCA 72 bp | CTGGAAAGGCTAAAAGAAACCTCCAGAAGGTTCTTCTaGCTCATGTCTGTGGTCTCAGGCCAGGACAGTCTT | + |
|
Preference number: 3 (lower is better) Translates to: LERLKETSRRFF*LMSVVSGQDSL Trigger: AAGACTGTCCTGGCCTGAGACCACAGACATGAGCCAGAAGAACCTTCTGGAGGTTTCTTTTAGCCTTTCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
||
| 3UTR-3UTR CAA 90 bp | CCTGAATGGACTTGGAATCCTGCCAGGGTTTGTGTGTGTGTGTGTGTGTGTGTGGAGCGAGATTTGTACTaGCTATGCATCCCTATTACC | + |
|
Preference number: 3 (lower is better) Translates to: PEWTWNPARVCVCVCVCVERDLY*LCIPIT Trigger: GGTAATAGGGATGCATAGCAAGTACAAATCTCGCTC...CACACACACACACACACACACACAAACCCTGGCAGGATTCCAAGTCCATTCAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
||
| 3UTR-3UTR CAA 90 bp | CTTCTCTTACTTGGCTTGGTTGGCTGGAACGGAGACCTGAATGGACTTGGAATCCTGTGGAAGTTGCTTTaGGTTAACAGAGAACCAGGC | + |
|
Preference number: 3 (lower is better) Translates to: LLLLGLVGWNGDLNGLGILWKLL*VNREPG Trigger: GCCTGGTTCTCTGTTAACCAAAAGCAACTTCCACAG...GATTCCAAGTCCATTCAGGTCTCCGTTCCAGCCAACCAAGCCAAGTAAGAGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
||
| 3UTR-3UTR CAA 90 bp | GCTGGCCTCAGACTCACAGATGTCTGCTTGCATCTGCCTCCTGAGTTCTGGGATCCCAAGAGTCTGTTATaGTCTTGTGATTTACAAAGC | + |
|
Preference number: 3 (lower is better) Translates to: AGLRLTDVCLHLPPEFWDPKSLL*SCDLQS Trigger: GCTTTGTAAATCACAAGACAATAACAGACTCTTGGG...ATCCCAGAACTCAGGAGGCAGATGCAAGCAGACATCTGTGAGTCTGAGGCCAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
||
| 3UTR TCA 72 bp | AGGTCCTCCGTAAGAGCAGCAAGCCCTCTTAACTGCTaGCCTATATCTTTCCAGCTCTGTGGAAGTTGCTTT | + |
|
Preference number: 3 (lower is better) Translates to: RSSVRAASPLNC*PISFQLCGSCF Trigger: AAAGCAACTTCCACAGAGCTGGAAAGATATAGGTCAGCAGTTAAGAGGGCTTGCTGCTCTTACGGAGGACCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
||
| 3UTR TCA 72 bp | AGGTTCAAGGAAAGCTCTTGCTCTATCTGTGCAGTCTaGGTTCGTGTGGAAGGAGAAGGCTGTGTATCGACA | + |
|
Preference number: 3 (lower is better) Translates to: RFKESSCSICAV*VRVEGEGCVST Trigger: TGTCGATACACAGCCTTCTCCTTCCACACGAACTCAGACTGCACAGATAGAGCAAGAGCTTTCCTTGAACCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
||
| 3UTR TCA 72 bp | AGTCTTCTGAGAATTGCAGAACTCTCCCTTCCCAGGTaGCCTTGTTGGGAAACAAAGCAACAGCTGAGGCTT | + |
|
Preference number: 3 (lower is better) Translates to: SLLRIAELSLPR*PCWETKQQLRL Trigger: AAGCCTCAGCTGTTGCTTTGTTTCCCAACAAGGTCACCTGGGAAGGGAGAGTTCTGCAATTCTCAGAAGACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
||
| 3UTR GCA 72 bp | GATTTGTACTTGCTATGCATCCCTATTACCCCTCTCTaGTCACTGCTGACTTACCGTGAGGCATACAAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: DLYLLCIPITPL*SLLTYREAYKQ Trigger: CTGCTTGTATGCCTCACGGTAAGTCAGCAGTGAGCAGAGAGGGGTAATAGGGATGCATAGCAAGTACAAATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
||
| 3UTR CCA 72 bp | CAGAAGAAGACATCAGATCCCTTAAAGCTAGGTACTTaGAACTCAGCTGAGGTCCTCCGTAAGAGCAGCAAG | + |
|
Preference number: 3 (lower is better) Translates to: QKKTSDPLKLGT*NSAEVLRKSSK Trigger: CTTGCTGCTCTTACGGAGGACCTCAGCTGAGTTCCAAGTACCTAGCTTTAAGGGATCTGATGTCTTCTTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
||
| 3UTR CCA 72 bp | AAACAGATTTGCCTGCCTTCTCTTACTTGGCTTGGTTaGCTGGAACGGAGACCTGAATGGACTTGGAATCCT | + |
|
Preference number: 3 (lower is better) Translates to: KQICLPSLTWLG*LERRPEWTWNP Trigger: AGGATTCCAAGTCCATTCAGGTCTCCGTTCCAGCCAACCAAGCCAAGTAAGAGAAGGCAGGCAAATCTGTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
||
| 3UTR GCA 72 bp | TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTaGAGGTACTCACAGAGTTCAGAAGAAGACATCAGA | + |
|
Preference number: 3 (lower is better) Translates to: CVCVCVCVCVCV*RYSQSSEEDIR Trigger: TCTGATGTCTTCTTCTGAACTCTGTGAGTACCTGCACACACACACACACACACACACACACACACACACACA 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
||
| 3UTR GCA 72 bp | AATAGAACTTCAACATGGTGGACTCTGAAACAGATTTaGCTGCCTTCTCTTACTTGGCTTGGTTGGCTGGAA | + |
|
Preference number: 3 (lower is better) Translates to: NRTSTWWTLKQI*LPSLTWLGWLE Trigger: TTCCAGCCAACCAAGCCAAGTAAGAGAAGGCAGGCAAATCTGTTTCAGAGTCCACCATGTTGAAGTTCTATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
||
| 3UTR GCA 72 bp | ATGATGGGAACCAGATCTTCCAAATGCTTAAAGTATTaGCAACCAAAACTGAGCCCCAGGAATTCAGTGGGT | + |
|
Preference number: 3 (lower is better) Translates to: MMGTRSSKCLKY*QPKLSPRNSVG Trigger: ACCCACTGAATTCCTGGGGCTCAGTTTTGGTTGGCAATACTTTAAGCATTTGGAAGATCTGGTTCCCATCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
||
| 3UTR GCA 72 bp | ATTAAGTTCTTGATGATGGGAACCAGATCTTCCAAATaGTTAAAGTATTGCCAACCAAAACTGAGCCCCAGG | + |
|
Preference number: 3 (lower is better) Translates to: IKFLMMGTRSSK*LKYCQPKLSPR Trigger: CCTGGGGCTCAGTTTTGGTTGGCAATACTTTAAGCATTTGGAAGATCTGGTTCCCATCATCAAGAACTTAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
||
| 3UTR CCA 72 bp | ACCGGACATGACTTTAAAAATAGAACTTCAACATGGTaGACTCTGAAACAGATTTGCCTGCCTTCTCTTACT | + |
|
Preference number: 3 (lower is better) Translates to: TGHDFKNRTSTW*TLKQICLPSLT Trigger: AGTAAGAGAAGGCAGGCAAATCTGTTTCAGAGTCCACCATGTTGAAGTTCTATTTTTAAAGTCATGTCCGGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
||
| 3UTR TCA 72 bp | ATGACTTTAAAAATAGAACTTCAACATGGTGGACTCTaGAACAGATTTGCCTGCCTTCTCTTACTTGGCTTG | + |
|
Preference number: 3 (lower is better) Translates to: MTLKIELQHGGL*NRFACLLLLGL Trigger: CAAGCCAAGTAAGAGAAGGCAGGCAAATCTGTTTCAGAGTCCACCATGTTGAAGTTCTATTTTTAAAGTCAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
||
| 3UTR TCA 72 bp | CCCAAGAGTCTGTTATTGTCTTGTGATTTACAAAGCTaGAGGTGTTTAGGGAAAAATGGCAAGGATCATAGA | + |
|
Preference number: 3 (lower is better) Translates to: PKSLLLSCDLQS*RCLGKNGKDHR Trigger: TCTATGATCCTTGCCATTTTTCCCTAAACACCTTCAGCTTTGTAAATCACAAGACAATAACAGACTCTTGGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
||
| CDS-3UTR TCA 90 bp | AAACCTCCAGAAGGTTCTTCTGGCTCATGTCTGTGGTCTCAGGCCAGGACAGTCCAGACACCCTCAGCGTaGTCTCTGTCTGCTGCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: KPPEGSSGSCLWSQARTVQTPSA*SLSAAL Trigger: GAGAGCAGCAGACAGAGATCACGCTGAGGGTGTCTG...GACTGTCCTGGCCTGAGACCACAGACATGAGCCAGAAGAACCTTCTGGAGGTTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
||
| CDS-3UTR GCA 90 bp | TGGCTGGAACGGAGACCTGAATGGACTTGGAATCCTGCCAGGGTTTGTGTGTGTCCTTCGATGCCAAGATaGAGGCAGCCATCCATCGGG | + |
|
Preference number: 4 (lower is better) Translates to: WLERRPEWTWNPARVCVCPSMPR*RQPSIG Trigger: CCCGATGGATGGCTGCCTGCATCTTGGCATCGAAGG...ACACACACAAACCCTGGCAGGATTCCAAGTCCATTCAGGTCTCCGTTCCAGCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
||
| 3UTR CAA 72 bp | ACCCAGCCCAGGACCAAATCGACTGAGTCTTGGATCTaGGCTGAGACTGGGCTCCCACTTATCCCTTCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: TQPRTKSTESWI*AETGLPLIPSA Trigger: TGCTGAAGGGATAAGTGGGAGCCCAGTCTCAGCCAAGATCCAAGACTCAGTCGATTTGGTCCTGGGCTGGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
||
| CDS-3UTR TCA 90 bp | ATCCATAGGGTACCAGCCCTCTCTCCCCTCCACCCACTTTATAGGAAAAGAAGCGGCAAGGACATCTGGTaGTGGAGGAGGTTGGCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: IHRVPALSPLHPLYRKRSGKDIW*WRRLAE Trigger: TTCAGCCAACCTCCTCCATCACCAGATGTCCTTGCC...GCTTCTTTTCCTATAAAGTGGGTGGAGGGGAGAGAGGGCTGGTACCCTATGGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
||
| CDS-3UTR TCA 90 bp | CAGCCCAGGACCAAATCGACTGAGTCTTGGATCTTGGCTGAGACTGGGCTCCCAGCCGGATTTCCCAGTTaGCATTCCACTGCTTCATAT | + |
|
Preference number: 4 (lower is better) Translates to: QPRTKSTESWILAETGLPAGFPS*HSTASY Trigger: ATATGAAGCAGTGGAATGTCAACTGGGAAATCCGGC...TGGGAGCCCAGTCTCAGCCAAGATCCAAGACTCAGTCGATTTGGTCCTGGGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
||
| CDS-3UTR TCA 90 bp | TGGCTGGAACGGAGACCTGAATGGACTTGGAATCCTGCCAGGGTTTGTGTGTGTCCACAGAGCATAGTCTaGCCAGTCTTGGGCTATGTT | + |
|
Preference number: 4 (lower is better) Translates to: WLERRPEWTWNPARVCVCPQSIV*PVLGYV Trigger: AACATAGCCCAAGACTGGTCAGACTATGCTCTGTGG...ACACACACAAACCCTGGCAGGATTCCAAGTCCATTCAGGTCTCCGTTCCAGCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
||
| CDS-3UTR GCA 90 bp | GCTGGCCTCAGACTCACAGATGTCTGCTTGCATCTGCCTCCTGAGTTCTGGGATAGTTTTACCCTTCGATaGCAAGATGCAGGCAGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: AGLRLTDVCLHLPPEFWDSFTLR*QDAGSH Trigger: ATGGCTGCCTGCATCTTGGCATCGAAGGGTAAAACT...ATCCCAGAACTCAGGAGGCAGATGCAAGCAGACATCTGTGAGTCTGAGGCCAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
||
| CDS-3UTR CCA 90 bp | CTTCTCTTACTTGGCTTGGTTGGCTGGAACGGAGACCTGAATGGACTTGGAATCCCGCCAGTCAGTTTGTaGAAGAGGTCCTCATCGAGC | + |
|
Preference number: 4 (lower is better) Translates to: LLLLGLVGWNGDLNGLGIPPVSL*KRSSSS Trigger: GCTCGATGAGGACCTCTTCCACAAACTGACTGGCGG...GATTCCAAGTCCATTCAGGTCTCCGTTCCAGCCAACCAAGCCAAGTAAGAGAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
||
| CDS-3UTR TCA 90 bp | TATCCCTTCAGCACCTGTGTCTTTAAGAAGGGCTTCAGTGTGTCTGTGGGATTCACTGGGACAGCTTGCTaGTGTGATACTGCAGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: YPFSTCVFKKGFSVSVGFTGTAC*CDTAGL Trigger: CAGCCCTGCAGTATCACATCAGCAAGCTGTCCCAGT...GAATCCCACAGACACACTGAAGCCCTTCTTAAAGACACAGGTGCTGAAGGGATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
||
| CDS-3UTR GCA 90 bp | ATCCATAGGGTACCAGCCCTCTCTCCCCTCCACCCACTTTATAGGAAAAGAAGCTTGGTCAAACTCGATTaGCACCTGCCGGATTTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: IHRVPALSPLHPLYRKRSLVKLD*HLPDFP Trigger: TGGGAAATCCGGCAGGTGGCAATCGAGTTTGACCAA...GCTTCTTTTCCTATAAAGTGGGTGGAGGGGAGAGAGGGCTGGTACCCTATGGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
||
| CDS-3UTR CCA 90 bp | CCTGAATGGACTTGGAATCCTGCCAGGGTTTGTGTGTGTGTGTGTGTGTGTGTGTGCTCTCCATTTGCATaGTCAACTCGGACCACAAGC | + |
|
Preference number: 4 (lower is better) Translates to: PEWTWNPARVCVCVCVCVCSPFA*STRTTS Trigger: GCTTGTGGTCCGAGTTGACCATGCAAATGGAGAGCA...CACACACACACACACACACACACAAACCCTGGCAGGATTCCAAGTCCATTCAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
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| CDS-3UTR CCA 90 bp | TTACTCAAAACCCACTCATTCCCTCCTACTGAAAAACCAGAACATGACATTCAGGCAGGCGCACGGTCTTaGCATTGGGCAGGCGAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: LLKTHSFPPTEKPEHDIQAGARS*HWAGEG Trigger: GCCTTCGCCTGCCCAATGCCAAGACCGTGCGCCTGC...CTGAATGTCATGTTCTGGTTTTTCAGTAGGAGGGAATGAGTGGGTTTTGAGTAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
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| CDS-3UTR CCA 90 bp | CTCCTACTGAAAAACCAGAACATGACATTCAGGCAGCTGCCAAGGGCTTATGCTGGTGATGGAGGAGGTTaGCTGAAGGCCAGAACACTG | + |
|
Preference number: 4 (lower is better) Translates to: LLLKNQNMTFRQLPRAYAGDGGG*LKARTL Trigger: CAGTGTTCTGGCCTTCAGCCAACCTCCTCCATCACC...AGCATAAGCCCTTGGCAGCTGCCTGAATGTCATGTTCTGGTTTTTCAGTAGGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
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| CDS-3UTR CCA 90 bp | ATCCATAGGGTACCAGCCCTCTCTCCCCTCCACCCACTTTATAGGAAAAGAAGCTCTCCACGTTGTAACTaGTATCCCAGTGACCGCATC | + |
|
Preference number: 4 (lower is better) Translates to: IHRVPALSPLHPLYRKRSSPRCN*YPSDRI Trigger: GATGCGGTCACTGGGATACCAGTTACAACGTGGAGA...GCTTCTTTTCCTATAAAGTGGGTGGAGGGGAGAGAGGGCTGGTACCCTATGGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
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| CDS-3UTR GCA 90 bp | ATGGACTTGGAATCCTGCCAGGGTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGAATCCAGCCAGCCTaGATTCATCTTGGCTTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: MDLESCQGLCVCVCVCVCGIQPA*IHLGFV Trigger: GACAAAGCCAAGATGAATGCAGGCTGGCTGGATTCC...ACACACACACACACACACACACACACACAAACCCTGGCAGGATTCCAAGTCCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
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| CDS-3UTR GCA 90 bp | TGGCTGGAACGGAGACCTGAATGGACTTGGAATCCTGCCAGGGTTTGTGTGTGTCTGATAGGAGCTGTCTaGCATAGTTTTACCCTTCGA | + |
|
Preference number: 4 (lower is better) Translates to: WLERRPEWTWNPARVCVCLIGAV*HSFTLR Trigger: TCGAAGGGTAAAACTATGGCAGACAGCTCCTATCAG...ACACACACAAACCCTGGCAGGATTCCAAGTCCATTCAGGTCTCCGTTCCAGCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
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| CDS-3UTR GCA 90 bp | CTCCTACTGAAAAACCAGAACATGACATTCAGGCAGCTGCCAAGGGCTTATGCTCAGGCCTGGATGAACTaGAGTTTGGCTTCGACCAGA | + |
|
Preference number: 4 (lower is better) Translates to: LLLKNQNMTFRQLPRAYAQAWMN*SLASTR Trigger: TCTGGTCGAAGCCAAACTGCAGTTCATCCAGGCCTG...AGCATAAGCCCTTGGCAGCTGCCTGAATGTCATGTTCTGGTTTTTCAGTAGGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
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| CDS-3UTR GCA 90 bp | AGTTGCTTTTGGTTAACAGAGAACCAGGCCTGTTTTCTTGAGACCCAGCCCAGGAACTCAGGTAAGGATTaGCAGGCCTGGATGAACTGC | + |
|
Preference number: 4 (lower is better) Translates to: SCFWLTENQACFLETQPRNSGKD*QAWMNC Trigger: GCAGTTCATCCAGGCCTGGCAATCCTTACCTGAGTT...CCTGGGCTGGGTCTCAAGAAAACAGGCCTGGTTCTCTGTTAACCAAAAGCAACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
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| CDS-3UTR CCA 90 bp | GCTGGCCTCAGACTCACAGATGTCTGCTTGCATCTGCCTCCTGAGTTCTGGGATCCACCAATGTACTCATaGACAATCTTGCAATCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: AGLRLTDVCLHLPPEFWDPPMYS*TILQSA Trigger: TGCAGATTGCAAGATTGTCCATGAGTACATTGGTGG...ATCCCAGAACTCAGGAGGCAGATGCAAGCAGACATCTGTGAGTCTGAGGCCAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
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| 3UTR CAA 72 bp | AAGGAAGGACCAGAGTGTGTGGAGCGAGATTTGTACTaGCTATGCATCCCTATTACCCCTCTCTGCTCACTG | + |
|
Preference number: 4 (lower is better) Translates to: KEGPECVERDLY*LCIPITPLCSL Trigger: CAGTGAGCAGAGAGGGGTAATAGGGATGCATAGCAAGTACAAATCTCGCTCCACACACTCTGGTCCTTCCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
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| CDS-3UTR TCA 90 bp | TATCCCTTCAGCACCTGTGTCTTTAAGAAGGGCTTCAGTGTGTCTGTGGGATTCCGAAGCATCTTATGCTaGGGGGTGAAGAGAAGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: YPFSTCVFKKGFSVSVGFRSILC*GVKRRL Trigger: CAACCTTCTCTTCACCCCTCAGCATAAGATGCTTCG...GAATCCCACAGACACACTGAAGCCCTTCTTAAAGACACAGGTGCTGAAGGGATA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
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| CDS-3UTR GCA 90 bp | CTCCTACTGAAAAACCAGAACATGACATTCAGGCAGCTGCCAAGGGCTTATGCTCACAAGCTCCCAGGATaGAGATGTCAAGTCACCAGA | + |
|
Preference number: 4 (lower is better) Translates to: LLLKNQNMTFRQLPRAYAHKLPG*RCQVTR Trigger: TCTGGTGACTTGACATCTGCATCCTGGGAGCTTGTG...AGCATAAGCCCTTGGCAGCTGCCTGAATGTCATGTTCTGGTTTTTCAGTAGGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
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| CDS-3UTR GCA 90 bp | TGTTGGGAAACAAAGCAACAGCTGAGGCTTGAAGGTCTCTGGGCTCCATCCAAAGTGATCTCTGTCTGCTaGTCTCCATTTGCATGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: CWETKQQLRLEGLWAPSKVISVC*SPFAWS Trigger: TGACCATGCAAATGGAGAGCAGCAGACAGAGATCAC...TTTGGATGGAGCCCAGAGACCTTCAAGCCTCAGCTGTTGCTTTGTTTCCCAACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
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| CDS-3UTR GCA 90 bp | TATCCCTTCAGCACCTGTGTCTTTAAGAAGGGCTTCAGTGTGTCTGTGGGATTCAGCGTGATCTCTGTCTaGTGCTCTCCATTTGCATGG | + |
|
Preference number: 4 (lower is better) Translates to: YPFSTCVFKKGFSVSVGFSVISV*CSPFAW Trigger: CCATGCAAATGGAGAGCAGCAGACAGAGATCACGCT...GAATCCCACAGACACACTGAAGCCCTTCTTAAAGACACAGGTGCTGAAGGGATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
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| CDS-3UTR CCA 90 bp | ATCCATAGGGTACCAGCCCTCTCTCCCCTCCACCCACTTTATAGGAAAAGAAGCAGCCTGCATTCATCTTaGCTTTGTCAACCAAAGATC | + |
|
Preference number: 4 (lower is better) Translates to: IHRVPALSPLHPLYRKRSSLHSS*LCQPKI Trigger: GATCTTTGGTTGACAAAGCCAAGATGAATGCAGGCT...GCTTCTTTTCCTATAAAGTGGGTGGAGGGGAGAGAGGGCTGGTACCCTATGGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
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| CDS-3UTR CCA 90 bp | TTTCCAGCTCTGTGGAAGTTGCTTTTGGTTAACAGAGAACCAGGCCTGTTTTCTGATGCTGATGACCTCTaGCTGATAGGAGCTGTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: FPALWKLLLVNREPGLFSDADDL*LIGAVC Trigger: GCAGACAGCTCCTATCAGCCAGAGGTCATCAGCATC...AGAAAACAGGCCTGGTTCTCTGTTAACCAAAAGCAACTTCCACAGAGCTGGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
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| CDS-3UTR TCA 90 bp | ATGGACTTGGAATCCTGCCAGGGTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTCTTCTGGTCTTCTaGTATTCAGCACTTTGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: MDLESCQGLCVCVCVCVCVLLVF*YSALCR Trigger: TCTGCAAAGTGCTGAATATCAGAAGACCAGAAGAAC...ACACACACACACACACACACACACACACAAACCCTGGCAGGATTCCAAGTCCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
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| CDS-3UTR TCA 90 bp | TTTCCAGCTCTGTGGAAGTTGCTTTTGGTTAACAGAGAACCAGGCCTGTTTTCTAGCTGCTCATCCTCCTaGATGCTTTGCTCCATAAGG | + |
|
Preference number: 4 (lower is better) Translates to: FPALWKLLLVNREPGLFSSCSSS*MLCSIR Trigger: CCTTATGGAGCAAAGCATTCAGGAGGATGAGCAGCT...AGAAAACAGGCCTGGTTCTCTGTTAACCAAAAGCAACTTCCACAGAGCTGGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
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| CDS-3UTR GCA 90 bp | ATGGACTTGGAATCCTGCCAGGGTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGATACTGCAGGGCTaGAAAGATCAACATTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: MDLESCQGLCVCVCVCVCVILQG*KDQHFF Trigger: GAAGAAATGTTGATCTTTGCAGCCCTGCAGTATCAC...ACACACACACACACACACACACACACACAAACCCTGGCAGGATTCCAAGTCCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
||
| CDS-3UTR GCA 90 bp | GCTCTATCTGTGCAGTCTGAGTTCGTGTGGAAGGAGAAGGCTGTGTATCGACAAAACCTCAGACTTGGTTaGAAAGTCCTGTATTTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: ALSVQSEFVWKEKAVYRQNLRLG*KVLYFS Trigger: GCTGAAATACAGGACTTTGCAACCAAGTCTGAGGTT...TTGTCGATACACAGCCTTCTCCTTCCACACGAACTCAGACTGCACAGATAGAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
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| CDS-3UTR GCA 90 bp | AGTTGCTTTTGGTTAACAGAGAACCAGGCCTGTTTTCTTGAGACCCAGCCCAGGTTCCAAACTAGACAATaGTGCTTCTACCTCGTCAAC | + |
|
Preference number: 4 (lower is better) Translates to: SCFWLTENQACFLETQPRFQTRQ*CFYLVN Trigger: GTTGACGAGGTAGAAGCAGCATTGTCTAGTTTGGAA...CCTGGGCTGGGTCTCAAGAAAACAGGCCTGGTTCTCTGTTAACCAAAAGCAACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
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| CDS-3UTR GCA 90 bp | CTTCTCTTACTTGGCTTGGTTGGCTGGAACGGAGACCTGAATGGACTTGGAATCAATCAACCTGTTGTATaGAACTCCCAGGATGTCATC | + |
|
Preference number: 4 (lower is better) Translates to: LLLLGLVGWNGDLNGLGINQPVV*NSQDVI Trigger: GATGACATCCTGGGAGTTGCATACAACAGGTTGATT...GATTCCAAGTCCATTCAGGTCTCCGTTCCAGCCAACCAAGCCAAGTAAGAGAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
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| CDS-3UTR GCA 90 bp | CTTCTCTTACTTGGCTTGGTTGGCTGGAACGGAGACCTGAATGGACTTGGAATCCAGTTGACATTCCACTaGTTCATATTGGCGAATCTC | + |
|
Preference number: 4 (lower is better) Translates to: LLLLGLVGWNGDLNGLGIQLTFH*FILANL Trigger: GAGATTCGCCAATATGAAGCAGTGGAATGTCAACTG...GATTCCAAGTCCATTCAGGTCTCCGTTCCAGCCAACCAAGCCAAGTAAGAGAAG 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
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| CDS-3UTR GCA 90 bp | CTCCTACTGAAAAACCAGAACATGACATTCAGGCAGCTGCCAAGGGCTTATGCTAGAACACTGCAGTTTTaGTCTGTCAAAGGGCTATCA | + |
|
Preference number: 4 (lower is better) Translates to: LLLKNQNMTFRQLPRAYARTLQF*SVKGLS Trigger: TGATAGCCCTTTGACAGAGCAAAACTGCAGTGTTCT...AGCATAAGCCCTTGGCAGCTGCCTGAATGTCATGTTCTGGTTTTTCAGTAGGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
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| CDS-3UTR CCA 90 bp | AAGGAGGTCATTGTGACCAGGATTTGGAAGATCTGTCCAGGCTATAGCATGCAATTTCGTTTTGGTCCTTaGATCGGGTGGACAAGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: KEVIVTRIWKICPGYSMQFRFGP*IGWTRR Trigger: TCTTCTTGTCCACCCGATCCAAGGACCAAAACGAAA...TTGCATGCTATAGCCTGGACAGATCTTCCAAATCCTGGTCACAATGACCTCCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
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| CDS-3UTR GCA 90 bp | TATCCCTTCAGCACCTGTGTCTTTAAGAAGGGCTTCAGTGTGTCTGTGGGATTCACATTTCTTCTTCTGTaGAGTCGATTTCCTCCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: YPFSTCVFKKGFSVSVGFTFLLL*SRFPPR Trigger: TCTTGGAGGAAATCGACTGCACAGAAGAAGAAATGT...GAATCCCACAGACACACTGAAGCCCTTCTTAAAGACACAGGTGCTGAAGGGATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
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| CDS-3UTR GCA 90 bp | GCTCTATCTGTGCAGTCTGAGTTCGTGTGGAAGGAGAAGGCTGTGTATCGACAACAAACCAGTATTGCTTaGAAGCTTTTAACATCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: ALSVQSEFVWKEKAVYRQQTSIA*KLLTSA Trigger: AGCTGATGTTAAAAGCTTGCAAGCAATACTGGTTTG...TTGTCGATACACAGCCTTCTCCTTCCACACGAACTCAGACTGCACAGATAGAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
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| CDS-3UTR GCA 90 bp | TGTTGGGAAACAAAGCAACAGCTGAGGCTTGAAGGTCTCTGGGCTCCATCCAAAAAGACAAACCAGTATTaGTTGCAAGCTTTTAACATC | + |
|
Preference number: 4 (lower is better) Translates to: CWETKQQLRLEGLWAPSKKTNQY*LQAFNI Trigger: GATGTTAAAAGCTTGCAAGCAATACTGGTTTGTCTT...TTTGGATGGAGCCCAGAGACCTTCAAGCCTCAGCTGTTGCTTTGTTTCCCAACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
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| CDS-3UTR CCA 90 bp | AAGCTGAATTCTCATGGGCAACATGTAATCAAGGTGACATGTAATCAAGGAGGTCCATGTTTTCAAGACTaGAAGCCACCAGAGGTGATG | + |
|
Preference number: 4 (lower is better) Translates to: KLNSHGQHVIKVTCNQGGPCFQD*KPPEVM Trigger: CATCACCTCTGGTGGCTTCCAGTCTTGAAAACATGG...ACCTCCTTGATTACATGTCACCTTGATTACATGTTGCCCATGAGAATTCAGCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
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| CDS-3UTR CCA 90 bp | TTACTCAAAACCCACTCATTCCCTCCTACTGAAAAACCAGAACATGACATTCAGCGATACATTCACATCTaGCACAATTTCGCAGCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LLKTHSFPPTEKPEHDIQRYIHI*HNFAAS Trigger: AGAGGCTGCGAAATTGTGCCAGATGTGAATGTATCG...CTGAATGTCATGTTCTGGTTTTTCAGTAGGAGGGAATGAGTGGGTTTTGAGTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
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| 3UTR CAA 72 bp | GCATTTAGCCTTTTCCTCTTATACCAATTTATTCCTTaGAGATGTAGCTGTGTAACCACGGGAGAAATGCTA | + |
|
Preference number: 4 (lower is better) Translates to: AFSLFLLYQFIP*RCSCVTTGEML Trigger: TAGCATTTCTCCCGTGGTTACACAGCTACATCTCAAAGGAATAAATTGGTATAAGAGGAAAAGGCTAAATGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
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| CDS TCA 90 bp | CGCACGGTCTTGGCATTGGGCAGGCGAAGGCGAAGCATCTTATGCTaGGGGGTGAAGAGAAGGTTGGCGTCAGCCTGGACCCCACACTTG | + |
|
Preference number: 5 (lower is better) Translates to: RTVLALGRRRRSILC*GVKRRLASAWTPHL Trigger: CAAGTGTGGGGTCCAGGCTGACGCCAACCTTCTCTTCACCCCTCAGCATAAGATGCTTCGCCTTCGCCTGCCCAATGCCAAGACCGTGCG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
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| CDS GCA 90 bp | CCCCCGATATGTAGGTCCCCAGACACCCTCAGCGTGATCTCTGTCTaGTGCTCTCCATTTGCATGGTCAACTCGGACCACAAGCTCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: PPICRSPDTLSVISV*CSPFAWSTRTTSSQ Trigger: CTGGGAGCTTGTGGTCCGAGTTGACCATGCAAATGGAGAGCAGCAGACAGAGATCACGCTGAGGGTGTCTGGGGACCTACATATCGGGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
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| CDS-3UTR CAA 90 bp | AGTTGCTTTTGGTTAACAGAGAACCAGGCCTGTTTTCTTGAGACCCAGCCCAGGCGCAGGCGCACGGTCTaGGCATTGGGCAGGCGAAGG | + |
|
Preference number: 5 (lower is better) Translates to: SCFWLTENQACFLETQPRRRRTV*ALGRRR Trigger: CCTTCGCCTGCCCAATGCCAAGACCGTGCGCCTGCG...CCTGGGCTGGGTCTCAAGAAAACAGGCCTGGTTCTCTGTTAACCAAAAGCAACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
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| CDS-3UTR CAA 90 bp | AAACCTCCAGAAGGTTCTTCTGGCTCATGTCTGTGGTCTCAGGCCAGGACAGTCGCCTGGACCCCACACTaGTCCAGGGTCCAGTGTGTT | + |
|
Preference number: 5 (lower is better) Translates to: KPPEGSSGSCLWSQARTVAWTPH*SRVQCV Trigger: AACACACTGGACCCTGGACAAGTGTGGGGTCCAGGC...GACTGTCCTGGCCTGAGACCACAGACATGAGCCAGAAGAACCTTCTGGAGGTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
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| CDS GCA 90 bp | GTCCCCAGACACCCTCAGCGTGATCTCTGTCTGCTGCTCTCCATTTaGATGGTCAACTCGGACCACAAGCTCCCAGGATGCAGATGTCAA | + |
|
Preference number: 5 (lower is better) Translates to: VPRHPQRDLCLLLSI*MVNSDHKLPGCRCQ Trigger: TTGACATCTGCATCCTGGGAGCTTGTGGTCCGAGTTGACCATGCAAATGGAGAGCAGCAGACAGAGATCACGCTGAGGGTGTCTGGGGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
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| CDS GCA 90 bp | CCGATATGTAGGTCCCCAGACACCCTCAGCGTGATCTCTGTCTGCTaGTCTCCATTTGCATGGTCAACTCGGACCACAAGCTCCCAGGAT | + |
|
Preference number: 5 (lower is better) Translates to: PICRSPDTLSVISVC*SPFAWSTRTTSSQD Trigger: ATCCTGGGAGCTTGTGGTCCGAGTTGACCATGCAAATGGAGAGCAGCAGACAGAGATCACGCTGAGGGTGTCTGGGGACCTACATATCGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
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| CDS CCA 90 bp | CCAGACACCCTCAGCGTGATCTCTGTCTGCTGCTCTCCATTTGCATaGTCAACTCGGACCACAAGCTCCCAGGATGCAGATGTCAAGTCA | + |
|
Preference number: 5 (lower is better) Translates to: PDTLSVISVCCSPFA*STRTTSSQDADVKS Trigger: TGACTTGACATCTGCATCCTGGGAGCTTGTGGTCCGAGTTGACCATGCAAATGGAGAGCAGCAGACAGAGATCACGCTGAGGGTGTCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
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| CDS CCA 90 bp | CGAGGCTGGAACATGTCGGCAAGGACATCTGGTGATGGAGGAGGTTaGCTGAAGGCCAGAACACTGCAGTTTTGCTCTGTCAAAGGGCTA | + |
|
Preference number: 5 (lower is better) Translates to: RGWNMSARTSGDGGG*LKARTLQFCSVKGL Trigger: TAGCCCTTTGACAGAGCAAAACTGCAGTGTTCTGGCCTTCAGCCAACCTCCTCCATCACCAGATGTCCTTGCCGACATGTTCCAGCCTCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
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| CDS TCA 90 bp | GCTGGAACATGTCGGCAAGGACATCTGGTGATGGAGGAGGTTGGCTaGAGGCCAGAACACTGCAGTTTTGCTCTGTCAAAGGGCTATCAC | + |
|
Preference number: 5 (lower is better) Translates to: AGTCRQGHLVMEEVG*RPEHCSFALSKGYH Trigger: GTGATAGCCCTTTGACAGAGCAAAACTGCAGTGTTCTGGCCTTCAGCCAACCTCCTCCATCACCAGATGTCCTTGCCGACATGTTCCAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
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| CDS TCA 90 bp | GTCAACCAAAGATCGAGGCTGGAACATGTCGGCAAGGACATCTGGTaGTGGAGGAGGTTGGCTGAAGGCCAGAACACTGCAGTTTTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: VNQRSRLEHVGKDIW*WRRLAEGQNTAVLL Trigger: GAGCAAAACTGCAGTGTTCTGGCCTTCAGCCAACCTCCTCCATCACCAGATGTCCTTGCCGACATGTTCCAGCCTCGATCTTTGGTTGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
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| CDS GCA 90 bp | GTTGTCGGCCTTCCCGCCTTCCAGGGTCACTTCCAAACTAGACAATaGTGCTTCTACCTCGTCAACCTCAGACTTGGTTGCAAAGTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: VVGLPAFQGHFQTRQ*CFYLVNLRLGCKVL Trigger: CAGGACTTTGCAACCAAGTCTGAGGTTGACGAGGTAGAAGCAGCATTGTCTAGTTTGGAAGTGACCCTGGAAGGCGGGAAGGCCGACAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
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| CDS-3UTR CAA 90 bp | AAGGAGGTCATTGTGACCAGGATTTGGAAGATCTGTCCAGGCTATAGCATGCAAGGGGTGAAGAGAAGGTaGGCGTCAGCCTGGACCCCA | + |
|
Preference number: 5 (lower is better) Translates to: KEVIVTRIWKICPGYSMQGVKRR*ASAWTP Trigger: TGGGGTCCAGGCTGACGCCAACCTTCTCTTCACCCC...TTGCATGCTATAGCCTGGACAGATCTTCCAAATCCTGGTCACAATGACCTCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
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| CDS GCA 90 bp | GTCGGCCTTCCCGCCTTCCAGGGTCACTTCCAAACTAGACAATGCTaGTTCTACCTCGTCAACCTCAGACTTGGTTGCAAAGTCCTGTAT | + |
|
Preference number: 5 (lower is better) Translates to: VGLPAFQGHFQTRQC*FYLVNLRLGCKVLY Trigger: ATACAGGACTTTGCAACCAAGTCTGAGGTTGACGAGGTAGAAGCAGCATTGTCTAGTTTGGAAGTGACCCTGGAAGGCGGGAAGGCCGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
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| CDS GCA 90 bp | GACCTCTGGCTGATAGGAGCTGTCTGCCATAGTTTTACCCTTCGATaGCAAGATGCAGGCAGCCATCCATCGGGCATATTGATCCTCATG | + |
|
Preference number: 5 (lower is better) Translates to: DLWLIGAVCHSFTLR*QDAGSHPSGILILM Trigger: CATGAGGATCAATATGCCCGATGGATGGCTGCCTGCATCTTGGCATCGAAGGGTAAAACTATGGCAGACAGCTCCTATCAGCCAGAGGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
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| CDS-3UTR CAA 90 bp | CCTGAATGGACTTGGAATCCTGCCAGGGTTTGTGTGTGTGTGTGTGTGTGTGTGAACCGCCCACCTGGCTaGCTCGTAGAGTTGGTTTAT | + |
|
Preference number: 5 (lower is better) Translates to: PEWTWNPARVCVCVCVCVNRPPG*LVELVY Trigger: ATAAACCAACTCTACGAGCAAGCCAGGTGGGCGGTT...CACACACACACACACACACACACAAACCCTGGCAGGATTCCAAGTCCATTCAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
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| CDS TCA 90 bp | CTGCAGCTGCTCATCCTCCTGAATGCTTTGCTCCATAAGGGATCGTaGGGAATCCAGCCAGCCTGCATTCATCTTGGCTTTGTCAACCAA | + |
|
Preference number: 5 (lower is better) Translates to: LQLLILLNALLHKGS*GIQPACIHLGFVNQ Trigger: TTGGTTGACAAAGCCAAGATGAATGCAGGCTGGCTGGATTCCTCACGATCCCTTATGGAGCAAAGCATTCAGGAGGATGAGCAGCTGCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
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| CDS GCA 90 bp | GAGAAACGAAAGGATGCTGATGACCTCTGGCTGATAGGAGCTGTCTaGCATAGTTTTACCCTTCGATGCCAAGATGCAGGCAGCCATCCA | + |
|
Preference number: 5 (lower is better) Translates to: EKRKDADDLWLIGAV*HSFTLRCQDAGSHP Trigger: TGGATGGCTGCCTGCATCTTGGCATCGAAGGGTAAAACTATGGCAGACAGCTCCTATCAGCCAGAGGTCATCAGCATCCTTTCGTTTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
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| CDS-3UTR CAA 90 bp | TGTTGGGAAACAAAGCAACAGCTGAGGCTTGAAGGTCTCTGGGCTCCATCCAAATCTGCTGCTCTCCATTaGCATGGTCAACTCGGACCA | + |
|
Preference number: 5 (lower is better) Translates to: CWETKQQLRLEGLWAPSKSAALH*HGQLGP Trigger: TGGTCCGAGTTGACCATGCAAATGGAGAGCAGCAGA...TTTGGATGGAGCCCAGAGACCTTCAAGCCTCAGCTGTTGCTTTGTTTCCCAACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
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| CDS-3UTR CAA 90 bp | TGTTGGGAAACAAAGCAACAGCTGAGGCTTGAAGGTCTCTGGGCTCCATCCAAAATCTGTTCCACGAGCTaGAGCATCACTCCCCCGATA | + |
|
Preference number: 5 (lower is better) Translates to: CWETKQQLRLEGLWAPSKICSTS*SITPPI Trigger: TATCGGGGGAGTGATGCTCAAGCTCGTGGAACAGAT...TTTGGATGGAGCCCAGAGACCTTCAAGCCTCAGCTGTTGCTTTGTTTCCCAACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
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| CDS-3UTR CAA 90 bp | GCTCTATCTGTGCAGTCTGAGTTCGTGTGGAAGGAGAAGGCTGTGTATCGACAATTTGGTCAAACTCGATaGCCACCTGCCGGATTTCCC | + |
|
Preference number: 5 (lower is better) Translates to: ALSVQSEFVWKEKAVYRQFGQTR*PPAGFP Trigger: GGGAAATCCGGCAGGTGGCAATCGAGTTTGACCAAA...TTGTCGATACACAGCCTTCTCCTTCCACACGAACTCAGACTGCACAGATAGAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
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| CDS-3UTR CAA 90 bp | ATGGACTTGGAATCCTGCCAGGGTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTCGTTTTGGTCCTaGGATCGGGTGGACAAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: MDLESCQGLCVCVCVCVCVSFWS*DRVDKK Trigger: CTTCTTGTCCACCCGATCCAAGGACCAAAACGAAAC...ACACACACACACACACACACACACACACAAACCCTGGCAGGATTCCAAGTCCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
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| CDS TCA 90 bp | CACCAATGTACTCATGGACAATCTTGCAATCTGCACTTAGGCAGGTaGATGCGATGGAGACGTTTTGGTCAAACTCGATTGCCACCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: HQCTHGQSCNLHLGR*MRWRRFGQTRLPPA Trigger: GGCAGGTGGCAATCGAGTTTGACCAAAACGTCTCCATCGCATTCACCTGCCTAAGTGCAGATTGCAAGATTGTCCATGAGTACATTGGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
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| CDS-3UTR CAA 90 bp | CCTGAATGGACTTGGAATCCTGCCAGGGTTTGTGTGTGTGTGTGTGTGTGTGTGTACTCATGGACAATCTaGCAATCTGCACTTAGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: PEWTWNPARVCVCVCVCVYSWTI*QSALRQ Trigger: CTGCCTAAGTGCAGATTGCAAGATTGTCCATGAGTA...CACACACACACACACACACACACAAACCCTGGCAGGATTCCAAGTCCATTCAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
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| CDS GCA 90 bp | CAAACTAGACAATGCTGCTTCTACCTCGTCAACCTCAGACTTGGTTaGAAAGTCCTGTATTTCAGCACACTGGGACAGCTTGCTGATGTG | + |
|
Preference number: 5 (lower is better) Translates to: QTRQCCFYLVNLRLG*KVLYFSTLGQLADV Trigger: CACATCAGCAAGCTGTCCCAGTGTGCTGAAATACAGGACTTTGCAACCAAGTCTGAGGTTGACGAGGTAGAAGCAGCATTGTCTAGTTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
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| CDS-3UTR CAA 90 bp | TATCCCTTCAGCACCTGTGTCTTTAAGAAGGGCTTCAGTGTGTCTGTGGGATTCCTGGGGAACCTGAACTaGTTGAAGAACTTTCCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: YPFSTCVFKKGFSVSVGFLGNLN*LKNFPG Trigger: ACCTGGAAAGTTCTTCAACAAGTTCAGGTTCCCCAG...GAATCCCACAGACACACTGAAGCCCTTCTTAAAGACACAGGTGCTGAAGGGATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
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| CDS-3UTR CAA 90 bp | AAACCTCCAGAAGGTTCTTCTGGCTCATGTCTGTGGTCTCAGGCCAGGACAGTCACAAACCAGTATTGCTaGCAAGCTTTTAACATCAGC | + |
|
Preference number: 5 (lower is better) Translates to: KPPEGSSGSCLWSQARTVTNQYC*QAFNIS Trigger: GCTGATGTTAAAAGCTTGCAAGCAATACTGGTTTGT...GACTGTCCTGGCCTGAGACCACAGACATGAGCCAGAAGAACCTTCTGGAGGTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
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| CDS-3UTR CAA 90 bp | CTTCTCTTACTTGGCTTGGTTGGCTGGAACGGAGACCTGAATGGACTTGGAATCGGTTTAGCTTCTCTATaGGCTCTCCTTGTTCAAGCT | + |
|
Preference number: 5 (lower is better) Translates to: LLLLGLVGWNGDLNGLGIGLASL*ALLVQA Trigger: AGCTTGAACAAGGAGAGCCAATAGAGAAGCTAAACC...GATTCCAAGTCCATTCAGGTCTCCGTTCCAGCCAACCAAGCCAAGTAAGAGAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
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| CDS-3UTR CAA 90 bp | TTTCCAGCTCTGTGGAAGTTGCTTTTGGTTAACAGAGAACCAGGCCTGTTTTCTTGGATGAACTGCAGTTaGGCTTCGACCAGAGGCATC | + |
|
Preference number: 5 (lower is better) Translates to: FPALWKLLLVNREPGLFSWMNCS*ASTRGI Trigger: GATGCCTCTGGTCGAAGCCAAACTGCAGTTCATCCA...AGAAAACAGGCCTGGTTCTCTGTTAACCAAAAGCAACTTCCACAGAGCTGGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
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| CDS CCA 90 bp | GTTCCGGTTTTTCATCTTGAGAAACGAAAGGATGCTGATGACCTCTaGCTGATAGGAGCTGTCTGCCATAGTTTTACCCTTCGATGCCAA | + |
|
Preference number: 5 (lower is better) Translates to: VPVFHLEKRKDADDL*LIGAVCHSFTLRCQ Trigger: TTGGCATCGAAGGGTAAAACTATGGCAGACAGCTCCTATCAGCCAGAGGTCATCAGCATCCTTTCGTTTCTCAAGATGAAAAACCGGAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
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| CDS-3UTR CAA 90 bp | ATGGACTTGGAATCCTGCCAGGGTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATTCTAATCAACCTGTaGTATGCAACTCCCAGGATG | + |
|
Preference number: 5 (lower is better) Translates to: MDLESCQGLCVCVCVCVCILINL*YATPRM Trigger: CATCCTGGGAGTTGCATACAACAGGTTGATTAGAAT...ACACACACACACACACACACACACACACAAACCCTGGCAGGATTCCAAGTCCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
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| CDS-3UTR CAA 90 bp | CTCAAAACCCACTCATTCCCTCCTACTGAAAAACCAGAACATGACATTCAGGCATGCGATGGAGACGTTTaGGTCAAACTCGATTGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: LKTHSFPPTEKPEHDIQACDGDV*VKLDCH Trigger: GTGGCAATCGAGTTTGACCAAAACGTCTCCATCGCA...TGCCTGAATGTCATGTTCTGGTTTTTCAGTAGGAGGGAATGAGTGGGTTTTGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
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| CDS-3UTR CAA 90 bp | CTCAAAACCCACTCATTCCCTCCTACTGAAAAACCAGAACATGACATTCAGGCACAGAACACTGCAGTTTaGCTCTGTCAAAGGGCTATC | + |
|
Preference number: 5 (lower is better) Translates to: LKTHSFPPTEKPEHDIQAQNTAV*LCQRAI Trigger: GATAGCCCTTTGACAGAGCAAAACTGCAGTGTTCTG...TGCCTGAATGTCATGTTCTGGTTTTTCAGTAGGAGGGAATGAGTGGGTTTTGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
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| CDS-3UTR CAA 90 bp | AGTTGCTTTTGGTTAACAGAGAACCAGGCCTGTTTTCTTGAGACCCAGCCCAGGCTCTATTGGCTCTCCTaGTTCAAGCTCCTTATTTTT | + |
|
Preference number: 5 (lower is better) Translates to: SCFWLTENQACFLETQPRLYWLS*FKLLIF Trigger: AAAAATAAGGAGCTTGAACAAGGAGAGCCAATAGAG...CCTGGGCTGGGTCTCAAGAAAACAGGCCTGGTTCTCTGTTAACCAAAAGCAACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
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| CDS-3UTR CAA 90 bp | TTTCCAGCTCTGTGGAAGTTGCTTTTGGTTAACAGAGAACCAGGCCTGTTTTCTGGGAACCTGAACTTGTaGAAGAACTTTCCAGGTTCA | + |
|
Preference number: 5 (lower is better) Translates to: FPALWKLLLVNREPGLFSGNLNL*KNFPGS Trigger: TGAACCTGGAAAGTTCTTCAACAAGTTCAGGTTCCC...AGAAAACAGGCCTGGTTCTCTGTTAACCAAAAGCAACTTCCACAGAGCTGGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
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| CDS-3UTR CAA 90 bp | TTACTCAAAACCCACTCATTCCCTCCTACTGAAAAACCAGAACATGACATTCAGGGCTTGCTCGTAGAGTaGGTTTATTCTGACAGCGTC | + |
|
Preference number: 5 (lower is better) Translates to: LLKTHSFPPTEKPEHDIQGLLVE*VYSDSV Trigger: GACGCTGTCAGAATAAACCAACTCTACGAGCAAGCC...CTGAATGTCATGTTCTGGTTTTTCAGTAGGAGGGAATGAGTGGGTTTTGAGTAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
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| CDS-3UTR CAA 90 bp | AAGCTGAATTCTCATGGGCAACATGTAATCAAGGTGACATGTAATCAAGGAGGTCAGCCTGCATTCATCTaGGCTTTGTCAACCAAAGAT | + |
|
Preference number: 5 (lower is better) Translates to: KLNSHGQHVIKVTCNQGGQPAFI*ALSTKD Trigger: ATCTTTGGTTGACAAAGCCAAGATGAATGCAGGCTG...ACCTCCTTGATTACATGTCACCTTGATTACATGTTGCCCATGAGAATTCAGCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
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| CDS-3UTR CAA 90 bp | AAGCTGAATTCTCATGGGCAACATGTAATCAAGGTGACATGTAATCAAGGAGGTACGGGGATTAGTAACTaGATTCCAAATTTTCTCCCC | + |
|
Preference number: 5 (lower is better) Translates to: KLNSHGQHVIKVTCNQGGTGISN*IPNFLP Trigger: GGGGAGAAAATTTGGAATCAAGTTACTAATCCCCGT...ACCTCCTTGATTACATGTCACCTTGATTACATGTTGCCCATGAGAATTCAGCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
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| CDS CAA 72 bp | ACCACAGCCGAAAAGCTGACGCGCAGGCGCACGGTCTaGGCATTGGGCAGGCGAAGGCGAAGCATCTTATGC | + |
|
Preference number: 6 (lower is better) Translates to: TTAEKLTRRRTV*ALGRRRRSILC Trigger: GCATAAGATGCTTCGCCTTCGCCTGCCCAATGCCAAGACCGTGCGCCTGCGCGTCAGCTTTTCGGCTGTGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
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| CDS TCA 72 bp | TTGGCATTGGGCAGGCGAAGGCGAAGCATCTTATGCTaGGGGGTGAAGAGAAGGTTGGCGTCAGCCTGGACC | + |
|
Preference number: 6 (lower is better) Translates to: LALGRRRRSILC*GVKRRLASAWT Trigger: GGTCCAGGCTGACGCCAACCTTCTCTTCACCCCTCAGCATAAGATGCTTCGCCTTCGCCTGCCCAATGCCAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
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| CDS GCA 72 bp | CACCCTCAGCGTGATCTCTGTCTGCTGCTCTCCATTTaGATGGTCAACTCGGACCACAAGCTCCCAGGATGC | + |
|
Preference number: 6 (lower is better) Translates to: HPQRDLCLLLSI*MVNSDHKLPGC Trigger: GCATCCTGGGAGCTTGTGGTCCGAGTTGACCATGCAAATGGAGAGCAGCAGACAGAGATCACGCTGAGGGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
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| CDS GCA 72 bp | TGTAGGTCCCCAGACACCCTCAGCGTGATCTCTGTCTaGTGCTCTCCATTTGCATGGTCAACTCGGACCACA | + |
|
Preference number: 6 (lower is better) Translates to: CRSPDTLSVISV*CSPFAWSTRTT Trigger: TGTGGTCCGAGTTGACCATGCAAATGGAGAGCAGCAGACAGAGATCACGCTGAGGGTGTCTGGGGACCTACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
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| CDS CCA 72 bp | CTCAGCGTGATCTCTGTCTGCTGCTCTCCATTTGCATaGTCAACTCGGACCACAAGCTCCCAGGATGCAGAT | + |
|
Preference number: 6 (lower is better) Translates to: LSVISVCCSPFA*STRTTSSQDAD Trigger: ATCTGCATCCTGGGAGCTTGTGGTCCGAGTTGACCATGCAAATGGAGAGCAGCAGACAGAGATCACGCTGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
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| CDS CAA 72 bp | GACCAGTCTTGGGCTATGTTCATCTGTTCCACGAGCTaGAGCATCACTCCCCCGATATGTAGGTCCCCAGAC | + |
|
Preference number: 6 (lower is better) Translates to: DQSWAMFICSTS*SITPPICRSPD Trigger: GTCTGGGGACCTACATATCGGGGGAGTGATGCTCAAGCTCGTGGAACAGATGAACATAGCCCAAGACTGGTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
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| CDS TCA 72 bp | TGTCGGCAAGGACATCTGGTGATGGAGGAGGTTGGCTaGAGGCCAGAACACTGCAGTTTTGCTCTGTCAAAG | + |
|
Preference number: 6 (lower is better) Translates to: CRQGHLVMEEVG*RPEHCSFALSK Trigger: CTTTGACAGAGCAAAACTGCAGTGTTCTGGCCTTCAGCCAACCTCCTCCATCACCAGATGTCCTTGCCGACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
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| CDS GCA 72 bp | CTTCCCGCCTTCCAGGGTCACTTCCAAACTAGACAATaGTGCTTCTACCTCGTCAACCTCAGACTTGGTTGC | + |
|
Preference number: 6 (lower is better) Translates to: LPAFQGHFQTRQ*CFYLVNLRLGC Trigger: GCAACCAAGTCTGAGGTTGACGAGGTAGAAGCAGCATTGTCTAGTTTGGAAGTGACCCTGGAAGGCGGGAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
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| CDS CCA 72 bp | TCTGCACTTAGGCAGGTGAATGCGATGGAGACGTTTTaGTCAAACTCGATTGCCACCTGCCGGATTTCCCAG | + |
|
Preference number: 6 (lower is better) Translates to: SALRQVNAMETF*SNSIATCRISQ Trigger: CTGGGAAATCCGGCAGGTGGCAATCGAGTTTGACCAAAACGTCTCCATCGCATTCACCTGCCTAAGTGCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
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| CDS CAA 72 bp | GCGAGTTTAGGGATGTCAGTTATGTCCTCCAAAGTGTaGTCGGCCTTCCCGCCTTCCAGGGTCACTTCCAAA | + |
|
Preference number: 6 (lower is better) Translates to: ASLGMSVMSSKV*SAFPPSRVTSK Trigger: TTTGGAAGTGACCCTGGAAGGCGGGAAGGCCGACAACACTTTGGAGGACATAACTGACATCCCTAAACTCGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
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| CDS CAA 90 bp | TGCTCCATAAGGGATCGTGAGGAATCCAGCCAGCCTGCATTCATCTaGGCTTTGTCAACCAAAGATCGAGGCTGGAACATGTCGGCAAGG | + |
|
Preference number: 6 (lower is better) Translates to: CSIRDREESSQPAFI*ALSTKDRGWNMSAR Trigger: CCTTGCCGACATGTTCCAGCCTCGATCTTTGGTTGACAAAGCCAAGATGAATGCAGGCTGGCTGGATTCCTCACGATCCCTTATGGAGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
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| CDS GCA 72 bp | CCCGCCTTCCAGGGTCACTTCCAAACTAGACAATGCTaGTTCTACCTCGTCAACCTCAGACTTGGTTGCAAA | + |
|
Preference number: 6 (lower is better) Translates to: PAFQGHFQTRQC*FYLVNLRLGCK Trigger: TTTGCAACCAAGTCTGAGGTTGACGAGGTAGAAGCAGCATTGTCTAGTTTGGAAGTGACCCTGGAAGGCGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
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| CDS GCA 72 bp | CTGATAGGAGCTGTCTGCCATAGTTTTACCCTTCGATaGCAAGATGCAGGCAGCCATCCATCGGGCATATTG | + |
|
Preference number: 6 (lower is better) Translates to: LIGAVCHSFTLR*QDAGSHPSGIL Trigger: CAATATGCCCGATGGATGGCTGCCTGCATCTTGGCATCGAAGGGTAAAACTATGGCAGACAGCTCCTATCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
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| CDS GCA 72 bp | AAGGATGCTGATGACCTCTGGCTGATAGGAGCTGTCTaGCATAGTTTTACCCTTCGATGCCAAGATGCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: KDADDLWLIGAV*HSFTLRCQDAG Trigger: GCCTGCATCTTGGCATCGAAGGGTAAAACTATGGCAGACAGCTCCTATCAGCCAGAGGTCATCAGCATCCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
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| CDS CAA 72 bp | TGGAGGAGGTTGGCTGAAGGCCAGAACACTGCAGTTTaGCTCTGTCAAAGGGCTATCACCAAACCAGGTCAT | + |
|
Preference number: 6 (lower is better) Translates to: WRRLAEGQNTAV*LCQRAITKPGH Trigger: ATGACCTGGTTTGGTGATAGCCCTTTGACAGAGCAAAACTGCAGTGTTCTGGCCTTCAGCCAACCTCCTCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
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| CDS CAA 72 bp | CAGTTTGTGGAAGAGGTCCTCATCGAGCGTTTCGTTTaGGTCCTTGGATCGGGTGGACAAGAAGATGTAGCC | + |
|
Preference number: 6 (lower is better) Translates to: QFVEEVLIERFV*VLGSGGQEDVA Trigger: GGCTACATCTTCTTGTCCACCCGATCCAAGGACCAAAACGAAACGCTCGATGAGGACCTCTTCCACAAACTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
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| CDS TCA 72 bp | CTCATCCTCCTGAATGCTTTGCTCCATAAGGGATCGTaGGGAATCCAGCCAGCCTGCATTCATCTTGGCTTT | + |
|
Preference number: 6 (lower is better) Translates to: LILLNALLHKGS*GIQPACIHLGF Trigger: AAAGCCAAGATGAATGCAGGCTGGCTGGATTCCTCACGATCCCTTATGGAGCAAAGCATTCAGGAGGATGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
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| CDS GCA 72 bp | CAATGCTGCTTCTACCTCGTCAACCTCAGACTTGGTTaGAAAGTCCTGTATTTCAGCACACTGGGACAGCTT | + |
|
Preference number: 6 (lower is better) Translates to: QCCFYLVNLRLG*KVLYFSTLGQL Trigger: AAGCTGTCCCAGTGTGCTGAAATACAGGACTTTGCAACCAAGTCTGAGGTTGACGAGGTAGAAGCAGCATTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
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| CDS CAA 72 bp | ACAATGCTGCTTCTACCTCGTCAACCTCAGACTTGGTaGCAAAGTCCTGTATTTCAGCACACTGGGACAGCT | + |
|
Preference number: 6 (lower is better) Translates to: TMLLLPRQPQTW*QSPVFQHTGTA Trigger: AGCTGTCCCAGTGTGCTGAAATACAGGACTTTGCAACCAAGTCTGAGGTTGACGAGGTAGAAGCAGCATTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
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| CDS CAA 72 bp | CTAGACAATGCTGCTTCTACCTCGTCAACCTCAGACTaGGTTGCAAAGTCCTGTATTTCAGCACACTGGGAC | + |
|
Preference number: 6 (lower is better) Translates to: LDNAASTSSTSD*VAKSCISAHWD Trigger: GTCCCAGTGTGCTGAAATACAGGACTTTGCAACCAAGTCTGAGGTTGACGAGGTAGAAGCAGCATTGTCTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
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| CDS CAA 72 bp | TACTGTACAAGCCGGGGCTTACTGGGGAACCTGAACTaGTTGAAGAACTTTCCAGGTTCAGGATGTCTTCAA | + |
|
Preference number: 6 (lower is better) Translates to: YCTSRGLLGNLN*LKNFPGSGCLQ Trigger: TTGAAGACATCCTGAACCTGGAAAGTTCTTCAACAAGTTCAGGTTCCCCAGTAAGCCCCGGCTTGTACAGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
||
| CDS CAA 72 bp | CTCCAAGAGAACCGCCCACCTGGCTTGCTCGTAGAGTaGGTTTATTCTGACAGCGTCATATTTAGGATTCAA | + |
|
Preference number: 6 (lower is better) Translates to: LQENRPPGLLVE*VYSDSVIFRIQ Trigger: TTGAATCCTAAATATGACGCTGTCAGAATAAACCAACTCTACGAGCAAGCCAGGTGGGCGGTTCTCTTGGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
||
| CDS CAA 90 bp | GTCGATTTCCTCCAAGAGAACCGCCCACCTGGCTTGCTCGTAGAGTaGGTTTATTCTGACAGCGTCATATTTAGGATTCAAGTCAAAGAA | + |
|
Preference number: 6 (lower is better) Translates to: VDFLQENRPPGLLVE*VYSDSVIFRIQVKE Trigger: TTCTTTGACTTGAATCCTAAATATGACGCTGTCAGAATAAACCAACTCTACGAGCAAGCCAGGTGGGCGGTTCTCTTGGAGGAAATCGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
||
| CDS TCA 72 bp | CAAAGTCCTGTATTTCAGCACACTGGGACAGCTTGCTaGTGTGATACTGCAGGGCTGCAAAGATCAACATTT | + |
|
Preference number: 6 (lower is better) Translates to: QSPVFQHTGTAC*CDTAGLQRSTF Trigger: AAATGTTGATCTTTGCAGCCCTGCAGTATCACATCAGCAAGCTGTCCCAGTGTGCTGAAATACAGGACTTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
||
| CDS TCA 72 bp | ACTCATGGACAATCTTGCAATCTGCACTTAGGCAGGTaGATGCGATGGAGACGTTTTGGTCAAACTCGATTG | + |
|
Preference number: 6 (lower is better) Translates to: THGQSCNLHLGR*MRWRRFGQTRL Trigger: CAATCGAGTTTGACCAAAACGTCTCCATCGCATTCACCTGCCTAAGTGCAGATTGCAAGATTGTCCATGAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
||
| CDS CCA 72 bp | TTTCATCTTGAGAAACGAAAGGATGCTGATGACCTCTaGCTGATAGGAGCTGTCTGCCATAGTTTTACCCTT | + |
|
Preference number: 6 (lower is better) Translates to: FHLEKRKDADDL*LIGAVCHSFTL Trigger: AAGGGTAAAACTATGGCAGACAGCTCCTATCAGCCAGAGGTCATCAGCATCCTTTCGTTTCTCAAGATGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
||
| CDS CAA 90 bp | GGCTTTAACAATGAAAGTTCTTCTGGTCTTCTGATATTCAGCACTTaGCAGATATCAGCGACAGCCTTAAACACCACAGCCGAAAAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: GFNNESSSGLLIFST*QISATALNTTAEKL Trigger: CAGCTTTTCGGCTGTGGTGTTTAAGGCTGTCGCTGATATCTGCAAAGTGCTGAATATCAGAAGACCAGAAGAACTTTCATTGTTAAAGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038280.5 |
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