Pregenerated sensors for FEN1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024742Ensembl transcript IDs: ENSMUST00000025651.6, ENSMUST00000116542.9, ENSMUST00000142241.2, ENSMUST00000156291.2
Found 130 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGGAGCAGTAGTCAGTCAGGTTCTAGTCACCTCTCCTCCACCAGCTaGCCAGCTGGGAAACTATCTCCAGCCTCGCTCCCGGCTTTATCT | + |
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Preference number: 1 (lower is better) Translates to: RSSSQSGSSHLSSTS*PAGKLSPASLPALS Trigger: AGATAAAGCCGGGAGCGAGGCTGGAGATAGTTTCCCAGCTGGCCAGCTGGTGGAGGAGAGGTGACTAGAACCTGACTGACTACTGCTCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025651.6 ENSMUST00000116542.9 ENSMUST00000142241.2 ENSMUST00000156291.2 |
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| 3UTR CCA 90 bp | TTCCTGCCACAGGGTCAAGAGAGGGAAAGCTCTGAAGGGCAGCGCTaGGAAGCAATGAACTCTCCTCAAGACGAGGGACAAGAGGGATGT | + |
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Preference number: 1 (lower is better) Translates to: FLPQGQERESSEGQR*EAMNSPQDEGQEGC Trigger: ACATCCCTCTTGTCCCTCGTCTTGAGGAGAGTTCATTGCTTCCCAGCGCTGCCCTTCAGAGCTTTCCCTCTCTTGACCCTGTGGCAGGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025651.6 ENSMUST00000116542.9 ENSMUST00000142241.2 ENSMUST00000156291.2 |
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| 3UTR GCA 90 bp | AGTACTAAATCTGTTGTCAGCCAGACTTCTCTCTGCTCGTCTCTTTaGAGTTCTTCCATCAGCGAATCCCAGGCTGATGGGCATCTTTCA | + |
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Preference number: 1 (lower is better) Translates to: STKSVVSQTSLCSSL*SSSISESQADGHLS Trigger: TGAAAGATGCCCATCAGCCTGGGATTCGCTGATGGAAGAACTGCAAAGAGACGAGCAGAGAGAAGTCTGGCTGACAACAGATTTAGTACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025651.6 ENSMUST00000116542.9 ENSMUST00000142241.2 ENSMUST00000156291.2 |
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| 3UTR GCA 90 bp | CCTATGAACAACAGTTTCTTCTCCCAAAACCTCAATTCAATTGATTaGCTCAGAAAGGCTGTCAGAACATCACTTGGAGGCACAGGTCAG | + |
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Preference number: 1 (lower is better) Translates to: PMNNSFFSQNLNSID*LRKAVRTSLGGTGQ Trigger: CTGACCTGTGCCTCCAAGTGATGTTCTGACAGCCTTTCTGAGGCAATCAATTGAATTGAGGTTTTGGGAGAAGAAACTGTTGTTCATAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025651.6 ENSMUST00000116542.9 ENSMUST00000142241.2 ENSMUST00000156291.2 |
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| 3UTR TCA 90 bp | ATAGCCTATGAACAACAGTTTCTTCTCCCAAAACCTCAATTCAATTaGTTGCCTCAGAAAGGCTGTCAGAACATCACTTGGAGGCACAGG | + |
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Preference number: 1 (lower is better) Translates to: IAYEQQFLLPKPQFN*LPQKGCQNITWRHR Trigger: CCTGTGCCTCCAAGTGATGTTCTGACAGCCTTTCTGAGGCAATCAATTGAATTGAGGTTTTGGGAGAAGAAACTGTTGTTCATAGGCTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025651.6 ENSMUST00000116542.9 ENSMUST00000142241.2 ENSMUST00000156291.2 |
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| 3UTR-3UTR GCA 90 bp | GTCAGTCAGGTTCTAGTCACCTCTCCTCCACCAGCTGGCCAGCTGGGAAACTATGAGCTACGGCCTTCCTaGCACAGGGTCAAGAGAGGG | + |
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Preference number: 2 (lower is better) Translates to: VSQVLVTSPPPAGQLGNYELRPS*HRVKRG Trigger: CCCTCTCTTGACCCTGTGGCAGGAAGGCCGTAGCTC...ATAGTTTCCCAGCTGGCCAGCTGGTGGAGGAGAGGTGACTAGAACCTGACTGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025651.6 ENSMUST00000116542.9 ENSMUST00000142241.2 ENSMUST00000156291.2 |
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| 3UTR-3UTR GCA 90 bp | CCTGCACAACTACTGGACTCAGCAGGCAGCAAGTTCAAATTTCTGCCCACAAAAGAGCTACGGCCTTCCTaGCACAGGGTCAAGAGAGGG | + |
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Preference number: 2 (lower is better) Translates to: PAQLLDSAGSKFKFLPTKELRPS*HRVKRG Trigger: CCCTCTCTTGACCCTGTGGCAGGAAGGCCGTAGCTC...TTTTGTGGGCAGAAATTTGAACTTGCTGCCTGCTGAGTCCAGTAGTTGTGCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025651.6 ENSMUST00000116542.9 ENSMUST00000142241.2 ENSMUST00000156291.2 |
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| 3UTR-3UTR TCA 90 bp | ACTCAGCAGGCAGCAAGTTCAAATTTCTGCCCACAAAAATCAGCTGGTCAGTACCAGCGAATCCCAGGCTaGTGGGCATCTTTCAGGGCA | + |
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Preference number: 2 (lower is better) Translates to: TQQAASSNFCPQKSAGQYQRIPG*WASFRA Trigger: TGCCCTGAAAGATGCCCATCAGCCTGGGATTCGCTG...GTACTGACCAGCTGATTTTTGTGGGCAGAAATTTGAACTTGCTGCCTGCTGAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000025651.6 ENSMUST00000116542.9 ENSMUST00000142241.2 ENSMUST00000156291.2 |
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| 3UTR CAA 90 bp | ACCTCAATTCAATTGATTGCCTCAGAAAGGCTGTCAGAACATCACTaGGAGGCACAGGTCAGTGGCACACTTAATGCCTTTGCCCTGGGG | + |
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Preference number: 2 (lower is better) Translates to: TSIQLIASERLSEHH*EAQVSGTLNAFALG Trigger: CCCCAGGGCAAAGGCATTAAGTGTGCCACTGACCTGTGCCTCCAAGTGATGTTCTGACAGCCTTTCTGAGGCAATCAATTGAATTGAGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025651.6 ENSMUST00000116542.9 ENSMUST00000142241.2 ENSMUST00000156291.2 |
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| 3UTR-3UTR CCA 90 bp | GACTCAGCAGGCAGCAAGTTCAAATTTCTGCCCACAAAAATCAGCTGGTCAGTACTCTCCTCCACCAGCTaGCCAGCTGGGAAACTATCT | + |
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Preference number: 2 (lower is better) Translates to: DSAGSKFKFLPTKISWSVLSSTS*PAGKLS Trigger: AGATAGTTTCCCAGCTGGCCAGCTGGTGGAGGAGAG...TACTGACCAGCTGATTTTTGTGGGCAGAAATTTGAACTTGCTGCCTGCTGAGTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000025651.6 ENSMUST00000116542.9 ENSMUST00000142241.2 ENSMUST00000156291.2 |
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| 3UTR-3UTR GCA 90 bp | AAAACCTCAATTCAATTGATTGCCTCAGAAAGGCTGTCAGAACATCACTTGGAGGAGCTACGGCCTTCCTaGCACAGGGTCAAGAGAGGG | + |
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Preference number: 2 (lower is better) Translates to: KTSIQLIASERLSEHHLEELRPS*HRVKRG Trigger: CCCTCTCTTGACCCTGTGGCAGGAAGGCCGTAGCTC...CTCCAAGTGATGTTCTGACAGCCTTTCTGAGGCAATCAATTGAATTGAGGTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025651.6 ENSMUST00000116542.9 ENSMUST00000142241.2 ENSMUST00000156291.2 |
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| 3UTR-3UTR CCA 90 bp | AACTACTGGACTCAGCAGGCAGCAAGTTCAAATTTCTGCCCACAAAAATCAGCTCTCTCCTCCACCAGCTaGCCAGCTGGGAAACTATCT | + |
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Preference number: 2 (lower is better) Translates to: NYWTQQAASSNFCPQKSALSSTS*PAGKLS Trigger: AGATAGTTTCCCAGCTGGCCAGCTGGTGGAGGAGAG...AGCTGATTTTTGTGGGCAGAAATTTGAACTTGCTGCCTGCTGAGTCCAGTAGTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000025651.6 ENSMUST00000116542.9 ENSMUST00000142241.2 ENSMUST00000156291.2 |
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| 3UTR-3UTR CCA 90 bp | TTCAAATTTCTGCCCACAAAAATCAGCTGGTCAGTACTAAATCTGTTGTCAGCCCACCAGCTGGCCAGCTaGGAAACTATCTCCAGCCTC | + |
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Preference number: 2 (lower is better) Translates to: FKFLPTKISWSVLNLLSAHQLAS*ETISSL Trigger: GAGGCTGGAGATAGTTTCCCAGCTGGCCAGCTGGTG...GGCTGACAACAGATTTAGTACTGACCAGCTGATTTTTGTGGGCAGAAATTTGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000025651.6 ENSMUST00000116542.9 ENSMUST00000142241.2 ENSMUST00000156291.2 |
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| 3UTR-3UTR GCA 90 bp | AAGTTCAAATTTCTGCCCACAAAAATCAGCTGGTCAGTACTAAATCTGTTGTCAGAGCTACGGCCTTCCTaGCACAGGGTCAAGAGAGGG | + |
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Preference number: 2 (lower is better) Translates to: KFKFLPTKISWSVLNLLSELRPS*HRVKRG Trigger: CCCTCTCTTGACCCTGTGGCAGGAAGGCCGTAGCTC...TGACAACAGATTTAGTACTGACCAGCTGATTTTTGTGGGCAGAAATTTGAACTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000025651.6 ENSMUST00000116542.9 ENSMUST00000142241.2 ENSMUST00000156291.2 |
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| 3UTR-3UTR CCA 90 bp | GTTCAAATTTCTGCCCACAAAAATCAGCTGGTCAGTACTAAATCTGTTGTCAGCCTCTCCTCCACCAGCTaGCCAGCTGGGAAACTATCT | + |
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Preference number: 2 (lower is better) Translates to: VQISAHKNQLVSTKSVVSLSSTS*PAGKLS Trigger: AGATAGTTTCCCAGCTGGCCAGCTGGTGGAGGAGAG...GCTGACAACAGATTTAGTACTGACCAGCTGATTTTTGTGGGCAGAAATTTGAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000025651.6 ENSMUST00000116542.9 ENSMUST00000142241.2 ENSMUST00000156291.2 |
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| 3UTR CAA 90 bp | TCGCTCCCGGCTTTATCTTCTTCTTCCTTAAGACATTGCTCGCAGTaGCACAGAACAATGACTACAGTGTCCATTAACCTGAGAAGTGGT | + |
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Preference number: 2 (lower is better) Translates to: SLPALSSSSLRHCSQ*HRTMTTVSINLRSG Trigger: ACCACTTCTCAGGTTAATGGACACTGTAGTCATTGTTCTGTGCAACTGCGAGCAATGTCTTAAGGAAGAAGAAGATAAAGCCGGGAGCGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025651.6 ENSMUST00000116542.9 ENSMUST00000142241.2 ENSMUST00000156291.2 |
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| 3UTR-3UTR TCA 90 bp | AAGTTCAAATTTCTGCCCACAAAAATCAGCTGGTCAGTACTAAATCTGTTGTCACAGCGAATCCCAGGCTaGTGGGCATCTTTCAGGGCA | + |
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Preference number: 2 (lower is better) Translates to: KFKFLPTKISWSVLNLLSQRIPG*WASFRA Trigger: TGCCCTGAAAGATGCCCATCAGCCTGGGATTCGCTG...TGACAACAGATTTAGTACTGACCAGCTGATTTTTGTGGGCAGAAATTTGAACTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000025651.6 ENSMUST00000116542.9 ENSMUST00000142241.2 ENSMUST00000156291.2 |
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| 3UTR CAA 90 bp | TTCAAATTTCTGCCCACAAAAATCAGCTGGTCAGTACTAAATCTGTaGTCAGCCAGACTTCTCTCTGCTCGTCTCTTTGCAGTTCTTCCA | + |
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Preference number: 2 (lower is better) Translates to: FKFLPTKISWSVLNL*SARLLSARLFAVLP Trigger: TGGAAGAACTGCAAAGAGACGAGCAGAGAGAAGTCTGGCTGACAACAGATTTAGTACTGACCAGCTGATTTTTGTGGGCAGAAATTTGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000025651.6 ENSMUST00000116542.9 ENSMUST00000142241.2 ENSMUST00000156291.2 |
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| 3UTR-3UTR GCA 90 bp | AAAACCTCAATTCAATTGATTGCCTCAGAAAGGCTGTCAGAACATCACTTGGAGTCAAAACTTAAACACTaGCATCTCACTCCCTGCACA | + |
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Preference number: 2 (lower is better) Translates to: KTSIQLIASERLSEHHLESKLKH*HLTPCT Trigger: TGTGCAGGGAGTGAGATGGCAGTGTTTAAGTTTTGA...CTCCAAGTGATGTTCTGACAGCCTTTCTGAGGCAATCAATTGAATTGAGGTTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025651.6 ENSMUST00000116542.9 ENSMUST00000142241.2 ENSMUST00000156291.2 |
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| 3UTR-3UTR CCA 90 bp | AAAACCTCAATTCAATTGATTGCCTCAGAAAGGCTGTCAGAACATCACTTGGAGCCCACAAAAATCAGCTaGTCAGTACTAAATCTGTTG | + |
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Preference number: 2 (lower is better) Translates to: KTSIQLIASERLSEHHLEPTKIS*SVLNLL Trigger: CAACAGATTTAGTACTGACCAGCTGATTTTTGTGGG...CTCCAAGTGATGTTCTGACAGCCTTTCTGAGGCAATCAATTGAATTGAGGTTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000025651.6 ENSMUST00000116542.9 ENSMUST00000142241.2 ENSMUST00000156291.2 |
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| 3UTR-3UTR GCA 90 bp | CCTATGAACAACAGTTTCTTCTCCCAAAACCTCAATTCAATTGATTGCCTCAGAGCAAGTTCAAATTTCTaGCCACAAAAATCAGCTGGT | + |
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Preference number: 2 (lower is better) Translates to: PMNNSFFSQNLNSIDCLRASSNF*PQKSAG Trigger: ACCAGCTGATTTTTGTGGGCAGAAATTTGAACTTGC...TCTGAGGCAATCAATTGAATTGAGGTTTTGGGAGAAGAAACTGTTGTTCATAGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000025651.6 ENSMUST00000116542.9 ENSMUST00000142241.2 ENSMUST00000156291.2 |
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| 3UTR CCA 72 bp | AGTCAGTCAGGTTCTAGTCACCTCTCCTCCACCAGCTaGCCAGCTGGGAAACTATCTCCAGCCTCGCTCCCG | + |
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Preference number: 3 (lower is better) Translates to: SQSGSSHLSSTS*PAGKLSPASLP Trigger: CGGGAGCGAGGCTGGAGATAGTTTCCCAGCTGGCCAGCTGGTGGAGGAGAGGTGACTAGAACCTGACTGACT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025651.6 ENSMUST00000116542.9 ENSMUST00000142241.2 ENSMUST00000156291.2 |
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| 3UTR CCA 72 bp | AGGCACAGGTCAGTGGCACACTTAATGCCTTTGCCCTaGGGTCAATCCCCAACACTGGAGAGGGGAGAGACA | + |
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Preference number: 3 (lower is better) Translates to: RHRSVAHLMPLP*GQSPTLERGET Trigger: TGTCTCTCCCCTCTCCAGTGTTGGGGATTGACCCCAGGGCAAAGGCATTAAGTGTGCCACTGACCTGTGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025651.6 ENSMUST00000116542.9 ENSMUST00000142241.2 ENSMUST00000156291.2 |
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| 3UTR TCA 72 bp | AGAGGGAAAGCTCTGAAGGGCAGCGCTGGGAAGCAATaGACTCTCCTCAAGACGAGGGACAAGAGGGATGTG | + |
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Preference number: 3 (lower is better) Translates to: RGKALKGSAGKQ*TLLKTRDKRDV Trigger: CACATCCCTCTTGTCCCTCGTCTTGAGGAGAGTTCATTGCTTCCCAGCGCTGCCCTTCAGAGCTTTCCCTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025651.6 ENSMUST00000116542.9 ENSMUST00000142241.2 ENSMUST00000156291.2 |
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| 3UTR GCA 72 bp | GAACTCTCCTCAAGACGAGGGACAAGAGGGATGTGCTaGAGCCGAGGGTACAAAACAGATAGACAGCCTGGG | + |
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Preference number: 3 (lower is better) Translates to: ELSSRRGTRGMC*SRGYKTDRQPG Trigger: CCCAGGCTGTCTATCTGTTTTGTACCCTCGGCTGCAGCACATCCCTCTTGTCCCTCGTCTTGAGGAGAGTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025651.6 ENSMUST00000116542.9 ENSMUST00000142241.2 ENSMUST00000156291.2 |
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| 3UTR-3UTR CAA 90 bp | CCAGCTGGGAAACTATCTCCAGCCTCGCTCCCGGCTTTATCTTCTTCTTCCTTAAGACATTGCTCGCAGTaGCACAGAACAATGACTACA | + |
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Preference number: 3 (lower is better) Translates to: PAGKLSPASLPALSSSSLRHCSQ*HRTMTT Trigger: TGTAGTCATTGTTCTGTGCAACTGCGAGCAATGTCT...TAAGGAAGAAGAAGATAAAGCCGGGAGCGAGGCTGGAGATAGTTTCCCAGCTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025651.6 ENSMUST00000116542.9 ENSMUST00000142241.2 ENSMUST00000156291.2 |
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| 3UTR-3UTR CAA 90 bp | AGCGAATCCCAGGCTGATGGGCATCTTTCAGGGCACAGTGAAATTAGAAGGAGCAGACATTGCTCGCAGTaGCACAGAACAATGACTACA | + |
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Preference number: 3 (lower is better) Translates to: SESQADGHLSGHSEIRRSRHCSQ*HRTMTT Trigger: TGTAGTCATTGTTCTGTGCAACTGCGAGCAATGTCT...GCTCCTTCTAATTTCACTGTGCCCTGAAAGATGCCCATCAGCCTGGGATTCGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025651.6 ENSMUST00000116542.9 ENSMUST00000142241.2 ENSMUST00000156291.2 |
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| 3UTR-3UTR CAA 90 bp | TTGATTGCCTCAGAAAGGCTGTCAGAACATCACTTGGAGGCACAGGTCAGTGGCTCAGTACTAAATCTGTaGTCAGCCAGACTTCTCTCT | + |
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Preference number: 3 (lower is better) Translates to: LIASERLSEHHLEAQVSGSVLNL*SARLLS Trigger: AGAGAGAAGTCTGGCTGACAACAGATTTAGTACTGA...GCCACTGACCTGTGCCTCCAAGTGATGTTCTGACAGCCTTTCTGAGGCAATCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025651.6 ENSMUST00000116542.9 ENSMUST00000142241.2 ENSMUST00000156291.2 |
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| 3UTR-3UTR CAA 90 bp | CTCAGCAGGCAGCAAGTTCAAATTTCTGCCCACAAAAATCAGCTGGTCAGTACTAGACATTGCTCGCAGTaGCACAGAACAATGACTACA | + |
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Preference number: 3 (lower is better) Translates to: LSRQQVQISAHKNQLVSTRHCSQ*HRTMTT Trigger: TGTAGTCATTGTTCTGTGCAACTGCGAGCAATGTCT...AGTACTGACCAGCTGATTTTTGTGGGCAGAAATTTGAACTTGCTGCCTGCTGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000025651.6 ENSMUST00000116542.9 ENSMUST00000142241.2 ENSMUST00000156291.2 |
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| 3UTR-3UTR CAA 90 bp | AAAACCTCAATTCAATTGATTGCCTCAGAAAGGCTGTCAGAACATCACTTGGAGTCTCTGCTCGTCTCTTaGCAGTTCTTCCATCAGCGA | + |
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Preference number: 3 (lower is better) Translates to: KTSIQLIASERLSEHHLESLLVS*QFFHQR Trigger: TCGCTGATGGAAGAACTGCAAAGAGACGAGCAGAGA...CTCCAAGTGATGTTCTGACAGCCTTTCTGAGGCAATCAATTGAATTGAGGTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025651.6 ENSMUST00000116542.9 ENSMUST00000142241.2 ENSMUST00000156291.2 |
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| 3UTR GCA 72 bp | AACAGTTTCTTCTCCCAAAACCTCAATTCAATTGATTaGCTCAGAAAGGCTGTCAGAACATCACTTGGAGGC | + |
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Preference number: 3 (lower is better) Translates to: NSFFSQNLNSID*LRKAVRTSLGG Trigger: GCCTCCAAGTGATGTTCTGACAGCCTTTCTGAGGCAATCAATTGAATTGAGGTTTTGGGAGAAGAAACTGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025651.6 ENSMUST00000116542.9 ENSMUST00000142241.2 ENSMUST00000156291.2 |
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| 3UTR TCA 72 bp | GAACAACAGTTTCTTCTCCCAAAACCTCAATTCAATTaGTTGCCTCAGAAAGGCTGTCAGAACATCACTTGG | + |
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Preference number: 3 (lower is better) Translates to: EQQFLLPKPQFN*LPQKGCQNITW Trigger: CCAAGTGATGTTCTGACAGCCTTTCTGAGGCAATCAATTGAATTGAGGTTTTGGGAGAAGAAACTGTTGTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025651.6 ENSMUST00000116542.9 ENSMUST00000142241.2 ENSMUST00000156291.2 |
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| CDS-3UTR GCA 90 bp | CCTTCCTGCCACAGGGTCAAGAGAGGGAAAGCTCTGAAGGGCAGCGCTGGGAAGCCCGCTTGGGCCCAATaGCACGGATGCTCTCGCAGT | + |
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Preference number: 4 (lower is better) Translates to: PSCHRVKRGKALKGSAGKPAWAQ*HGCSRS Trigger: ACTGCGAGAGCATCCGTGGCATTGGGCCCAAGCGGG...CTTCCCAGCGCTGCCCTTCAGAGCTTTCCCTCTCTTGACCCTGTGGCAGGAAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025651.6 ENSMUST00000116542.9 ENSMUST00000142241.2 ENSMUST00000156291.2 |
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| CDS-3UTR CCA 90 bp | CCTTCCTGCCACAGGGTCAAGAGAGGGAAAGCTCTGAAGGGCAGCGCTGGGAAGGAACGGGGTACTTGCTaGGGTCCAGCCGCCTCACGA | + |
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Preference number: 4 (lower is better) Translates to: PSCHRVKRGKALKGSAGKERGTC*GPAASR Trigger: TCGTGAGGCGGCTGGACCCCAGCAAGTACCCCGTTC...CTTCCCAGCGCTGCCCTTCAGAGCTTTCCCTCTCTTGACCCTGTGGCAGGAAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025651.6 ENSMUST00000116542.9 ENSMUST00000142241.2 ENSMUST00000156291.2 |
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| CDS-3UTR CCA 90 bp | GCCTTCCTGCCACAGGGTCAAGAGAGGGAAAGCTCTGAAGGGCAGCGCTGGGAAGAACGGGGTACTTGCTaGGGTCCAGCCGCCTCACGA | + |
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Preference number: 4 (lower is better) Translates to: AFLPQGQERESSEGQRWEERGTC*GPAASR Trigger: TCGTGAGGCGGCTGGACCCCAGCAAGTACCCCGTTC...TTCCCAGCGCTGCCCTTCAGAGCTTTCCCTCTCTTGACCCTGTGGCAGGAAGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025651.6 ENSMUST00000116542.9 ENSMUST00000142241.2 ENSMUST00000156291.2 |
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| CDS-3UTR GCA 90 bp | GACGAGGGACAAGAGGGATGTGCTGCAGCCGAGGGTACAAAACAGATAGACAGCGGCGTCCCTGGGTGCTaGCCTGGCGGCTCTTACTCA | + |
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Preference number: 4 (lower is better) Translates to: DEGQEGCAAAEGTKQIDSGVPGC*PGGSYS Trigger: TGAGTAAGAGCCGCCAGGGCAGCACCCAGGGACGCC...GCTGTCTATCTGTTTTGTACCCTCGGCTGCAGCACATCCCTCTTGTCCCTCGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025651.6 ENSMUST00000116542.9 ENSMUST00000142241.2 ENSMUST00000156291.2 |
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| CDS-3UTR GCA 90 bp | TGGGAAGCAATGAACTCTCCTCAAGACGAGGGACAAGAGGGATGTGCTGCAGCCCTGGAACGGGGTACTTaGTGGGGTCCAGCCGCCTCA | + |
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Preference number: 4 (lower is better) Translates to: WEAMNSPQDEGQEGCAAALERGT*WGPAAS Trigger: TGAGGCGGCTGGACCCCAGCAAGTACCCCGTTCCAG...GGCTGCAGCACATCCCTCTTGTCCCTCGTCTTGAGGAGAGTTCATTGCTTCCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025651.6 ENSMUST00000116542.9 ENSMUST00000142241.2 ENSMUST00000156291.2 |
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| CDS-3UTR GCA 90 bp | TCAGTGGCACACTTAATGCCTTTGCCCTGGGGTCAATCCCCAACACTGGAGAGGCTGGAACGGGGTACTTaGTGGGGTCCAGCCGCCTCA | + |
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Preference number: 4 (lower is better) Translates to: SVAHLMPLPWGQSPTLERLERGT*WGPAAS Trigger: TGAGGCGGCTGGACCCCAGCAAGTACCCCGTTCCAG...CCTCTCCAGTGTTGGGGATTGACCCCAGGGCAAAGGCATTAAGTGTGCCACTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000025651.6 ENSMUST00000116542.9 ENSMUST00000142241.2 ENSMUST00000156291.2 |
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| CDS-3UTR CCA 90 bp | GCCTTCCTGCCACAGGGTCAAGAGAGGGAAAGCTCTGAAGGGCAGCGCTGGGAATGGGTCCAGTACTTCTaGCTCCAGGAAGAGCTGCTG | + |
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Preference number: 4 (lower is better) Translates to: AFLPQGQERESSEGQRWEWVQYF*LQEELL Trigger: CAGCAGCTCTTCCTGGAGCCAGAAGTACTGGACCCA...TTCCCAGCGCTGCCCTTCAGAGCTTTCCCTCTCTTGACCCTGTGGCAGGAAGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025651.6 ENSMUST00000116542.9 ENSMUST00000142241.2 ENSMUST00000156291.2 |
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| CDS-3UTR TCA 90 bp | AGCAGTAGTCAGTCAGGTTCTAGTCACCTCTCCTCCACCAGCTGGCCAGCTGGGTCACGAGCCTCTTGGTaGACTTCTCCACCTCCTCCT | + |
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Preference number: 4 (lower is better) Translates to: SSSQSGSSHLSSTSWPAGSRASW*TSPPPP Trigger: AGGAGGAGGTGGAGAAGTTCACCAAGAGGCTCGTGA...CCCAGCTGGCCAGCTGGTGGAGGAGAGGTGACTAGAACCTGACTGACTACTGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025651.6 ENSMUST00000116542.9 ENSMUST00000142241.2 ENSMUST00000156291.2 |
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| CDS-3UTR GCA 90 bp | GACGAGGGACAAGAGGGATGTGCTGCAGCCGAGGGTACAAAACAGATAGACAGCTTCAGACCCAGCTCCTaGAGGACGCGGCTCAGATGG | + |
|
Preference number: 4 (lower is better) Translates to: DEGQEGCAAAEGTKQIDSFRPSS*RTRLRW Trigger: CCATCTGAGCCGCGTCCTGCAGGAGCTGGGTCTGAA...GCTGTCTATCTGTTTTGTACCCTCGGCTGCAGCACATCCCTCTTGTCCCTCGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025651.6 ENSMUST00000116542.9 ENSMUST00000142241.2 ENSMUST00000156291.2 |
||
| CDS-3UTR GCA 90 bp | CTTCTCTCTGCTCGTCTCTTTGCAGTTCTTCCATCAGCGAATCCCAGGCTGATGGGCGTCCCTGGGTGCTaGCCTGGCGGCTCTTACTCA | + |
|
Preference number: 4 (lower is better) Translates to: LLSARLFAVLPSANPRLMGVPGC*PGGSYS Trigger: TGAGTAAGAGCCGCCAGGGCAGCACCCAGGGACGCC...CATCAGCCTGGGATTCGCTGATGGAAGAACTGCAAAGAGACGAGCAGAGAGAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025651.6 ENSMUST00000116542.9 ENSMUST00000142241.2 ENSMUST00000156291.2 |
||
| CDS-3UTR CCA 90 bp | AGCAGTAGTCAGTCAGGTTCTAGTCACCTCTCCTCCACCAGCTGGCCAGCTGGGTGCTGGGCTTCCTTGTaGAGCCAGTTCTCTGGAACG | + |
|
Preference number: 4 (lower is better) Translates to: SSSQSGSSHLSSTSWPAGCWASL*SQFSGT Trigger: CGTTCCAGAGAACTGGCTCCACAAGGAAGCCCAGCA...CCCAGCTGGCCAGCTGGTGGAGGAGAGGTGACTAGAACCTGACTGACTACTGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025651.6 ENSMUST00000116542.9 ENSMUST00000142241.2 ENSMUST00000156291.2 |
||
| CDS-3UTR GCA 90 bp | TTGATTGCCTCAGAAAGGCTGTCAGAACATCACTTGGAGGCACAGGTCAGTGGCCCCGCTTGGGCCCAATaGCACGGATGCTCTCGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: LIASERLSEHHLEAQVSGPAWAQ*HGCSRS Trigger: ACTGCGAGAGCATCCGTGGCATTGGGCCCAAGCGGG...GCCACTGACCTGTGCCTCCAAGTGATGTTCTGACAGCCTTTCTGAGGCAATCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025651.6 ENSMUST00000116542.9 ENSMUST00000142241.2 ENSMUST00000156291.2 |
||
| CDS-3UTR GCA 90 bp | CTTCTCTCTGCTCGTCTCTTTGCAGTTCTTCCATCAGCGAATCCCAGGCTGATGCCCGCTTGGGCCCAATaGCACGGATGCTCTCGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: LLSARLFAVLPSANPRLMPAWAQ*HGCSRS Trigger: ACTGCGAGAGCATCCGTGGCATTGGGCCCAAGCGGG...CATCAGCCTGGGATTCGCTGATGGAAGAACTGCAAAGAGACGAGCAGAGAGAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025651.6 ENSMUST00000116542.9 ENSMUST00000142241.2 ENSMUST00000156291.2 |
||
| CDS-3UTR GCA 90 bp | AGTGAAATTAGAAGGAGCAGTAGTCAGTCAGGTTCTAGTCACCTCTCCTCCACCCGAGGCGTCCCTGGGTaGTGCCCTGGCGGCTCTTAC | + |
|
Preference number: 4 (lower is better) Translates to: SEIRRSSSQSGSSHLSSTRGVPG*CPGGSY Trigger: GTAAGAGCCGCCAGGGCAGCACCCAGGGACGCCTCG...GGTGGAGGAGAGGTGACTAGAACCTGACTGACTACTGCTCCTTCTAATTTCACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025651.6 ENSMUST00000116542.9 ENSMUST00000142241.2 ENSMUST00000156291.2 |
||
| CDS-3UTR CCA 90 bp | TTGATTGCCTCAGAAAGGCTGTCAGAACATCACTTGGAGGCACAGGTCAGTGGCGATCCACAGCCCGCTTaGGCCCAATGCCACGGATGC | + |
|
Preference number: 4 (lower is better) Translates to: LIASERLSEHHLEAQVSGDPQPA*AQCHGC Trigger: GCATCCGTGGCATTGGGCCCAAGCGGGCTGTGGATC...GCCACTGACCTGTGCCTCCAAGTGATGTTCTGACAGCCTTTCTGAGGCAATCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025651.6 ENSMUST00000116542.9 ENSMUST00000142241.2 ENSMUST00000156291.2 |
||
| CDS-3UTR CCA 90 bp | CTTCTCTCTGCTCGTCTCTTTGCAGTTCTTCCATCAGCGAATCCCAGGCTGATGGATCCACAGCCCGCTTaGGCCCAATGCCACGGATGC | + |
|
Preference number: 4 (lower is better) Translates to: LLSARLFAVLPSANPRLMDPQPA*AQCHGC Trigger: GCATCCGTGGCATTGGGCCCAAGCGGGCTGTGGATC...CATCAGCCTGGGATTCGCTGATGGAAGAACTGCAAAGAGACGAGCAGAGAGAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025651.6 ENSMUST00000116542.9 ENSMUST00000142241.2 ENSMUST00000156291.2 |
||
| CDS-3UTR CCA 90 bp | CTTCTCTCTGCTCGTCTCTTTGCAGTTCTTCCATCAGCGAATCCCAGGCTGATGGAACGGGGTACTTGCTaGGGTCCAGCCGCCTCACGA | + |
|
Preference number: 4 (lower is better) Translates to: LLSARLFAVLPSANPRLMERGTC*GPAASR Trigger: TCGTGAGGCGGCTGGACCCCAGCAAGTACCCCGTTC...CATCAGCCTGGGATTCGCTGATGGAAGAACTGCAAAGAGACGAGCAGAGAGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025651.6 ENSMUST00000116542.9 ENSMUST00000142241.2 ENSMUST00000156291.2 |
||
| CDS-3UTR CCA 90 bp | AGCGAATCCCAGGCTGATGGGCATCTTTCAGGGCACAGTGAAATTAGAAGGAGCGAACGGGGTACTTGCTaGGGTCCAGCCGCCTCACGA | + |
|
Preference number: 4 (lower is better) Translates to: SESQADGHLSGHSEIRRSERGTC*GPAASR Trigger: TCGTGAGGCGGCTGGACCCCAGCAAGTACCCCGTTC...GCTCCTTCTAATTTCACTGTGCCCTGAAAGATGCCCATCAGCCTGGGATTCGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025651.6 ENSMUST00000116542.9 ENSMUST00000142241.2 ENSMUST00000156291.2 |
||
| CDS-3UTR TCA 90 bp | TCCTGCCACAGGGTCAAGAGAGGGAAAGCTCTGAAGGGCAGCGCTGGGAAGCAAAGACGTACACAGGCTTaGTGCCATTCTCCATCATGC | + |
|
Preference number: 4 (lower is better) Translates to: SCHRVKRGKALKGSAGKQRRTQA*CHSPSC Trigger: GCATGATGGAGAATGGCATCAAGCCTGTGTACGTCT...TTGCTTCCCAGCGCTGCCCTTCAGAGCTTTCCCTCTCTTGACCCTGTGGCAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025651.6 ENSMUST00000116542.9 ENSMUST00000142241.2 ENSMUST00000156291.2 |
||
| CDS-3UTR GCA 90 bp | CTTCTCTCTGCTCGTCTCTTTGCAGTTCTTCCATCAGCGAATCCCAGGCTGATGTTCAGACCCAGCTCCTaGAGGACGCGGCTCAGATGG | + |
|
Preference number: 4 (lower is better) Translates to: LLSARLFAVLPSANPRLMFRPSS*RTRLRW Trigger: CCATCTGAGCCGCGTCCTGCAGGAGCTGGGTCTGAA...CATCAGCCTGGGATTCGCTGATGGAAGAACTGCAAAGAGACGAGCAGAGAGAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025651.6 ENSMUST00000116542.9 ENSMUST00000142241.2 ENSMUST00000156291.2 |
||
| CDS-3UTR CCA 90 bp | TCAGTGGCACACTTAATGCCTTTGCCCTGGGGTCAATCCCCAACACTGGAGAGGTGGGTCCAGTACTTCTaGCTCCAGGAAGAGCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SVAHLMPLPWGQSPTLERWVQYF*LQEELL Trigger: CAGCAGCTCTTCCTGGAGCCAGAAGTACTGGACCCA...CCTCTCCAGTGTTGGGGATTGACCCCAGGGCAAAGGCATTAAGTGTGCCACTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025651.6 ENSMUST00000116542.9 ENSMUST00000142241.2 ENSMUST00000156291.2 |
||
| CDS-3UTR CCA 90 bp | TGGGAAGCAATGAACTCTCCTCAAGACGAGGGACAAGAGGGATGTGCTGCAGCCTGGGTCCAGTACTTCTaGCTCCAGGAAGAGCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: WEAMNSPQDEGQEGCAAAWVQYF*LQEELL Trigger: CAGCAGCTCTTCCTGGAGCCAGAAGTACTGGACCCA...GGCTGCAGCACATCCCTCTTGTCCCTCGTCTTGAGGAGAGTTCATTGCTTCCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025651.6 ENSMUST00000116542.9 ENSMUST00000142241.2 ENSMUST00000156291.2 |
||
| CDS-3UTR GCA 90 bp | CCTGCACAACTACTGGACTCAGCAGGCAGCAAGTTCAAATTTCTGCCCACAAAACTGGAACGGGGTACTTaGTGGGGTCCAGCCGCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: PAQLLDSAGSKFKFLPTKLERGT*WGPAAS Trigger: TGAGGCGGCTGGACCCCAGCAAGTACCCCGTTCCAG...TTTTGTGGGCAGAAATTTGAACTTGCTGCCTGCTGAGTCCAGTAGTTGTGCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000025651.6 ENSMUST00000116542.9 ENSMUST00000142241.2 ENSMUST00000156291.2 |
||
| CDS-3UTR GCA 90 bp | AACTACTGGACTCAGCAGGCAGCAAGTTCAAATTTCTGCCCACAAAAATCAGCTCGAGGCGTCCCTGGGTaGTGCCCTGGCGGCTCTTAC | + |
|
Preference number: 4 (lower is better) Translates to: NYWTQQAASSNFCPQKSARGVPG*CPGGSY Trigger: GTAAGAGCCGCCAGGGCAGCACCCAGGGACGCCTCG...AGCTGATTTTTGTGGGCAGAAATTTGAACTTGCTGCCTGCTGAGTCCAGTAGTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000025651.6 ENSMUST00000116542.9 ENSMUST00000142241.2 ENSMUST00000156291.2 |
||
| CDS-3UTR CCA 90 bp | AGCAGTAGTCAGTCAGGTTCTAGTCACCTCTCCTCCACCAGCTGGCCAGCTGGGGCTTCTTGGCCTCACTaGCAGTTAAGTGTCGCATTA | + |
|
Preference number: 4 (lower is better) Translates to: SSSQSGSSHLSSTSWPAGASWPH*QLSVAL Trigger: TAATGCGACACTTAACTGCCAGTGAGGCCAAGAAGC...CCCAGCTGGCCAGCTGGTGGAGGAGAGGTGACTAGAACCTGACTGACTACTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025651.6 ENSMUST00000116542.9 ENSMUST00000142241.2 ENSMUST00000156291.2 |
||
| CDS-3UTR TCA 90 bp | TGGGAAGCAATGAACTCTCCTCAAGACGAGGGACAAGAGGGATGTGCTGCAGCCAGACGTACACAGGCTTaGTGCCATTCTCCATCATGC | + |
|
Preference number: 4 (lower is better) Translates to: WEAMNSPQDEGQEGCAAARRTQA*CHSPSC Trigger: GCATGATGGAGAATGGCATCAAGCCTGTGTACGTCT...GGCTGCAGCACATCCCTCTTGTCCCTCGTCTTGAGGAGAGTTCATTGCTTCCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025651.6 ENSMUST00000116542.9 ENSMUST00000142241.2 ENSMUST00000156291.2 |
||
| CDS-3UTR TCA 90 bp | CCAGCTGGGAAACTATCTCCAGCCTCGCTCCCGGCTTTATCTTCTTCTTCCTTATCACGAGCCTCTTGGTaGACTTCTCCACCTCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: PAGKLSPASLPALSSSSLSRASW*TSPPPP Trigger: AGGAGGAGGTGGAGAAGTTCACCAAGAGGCTCGTGA...TAAGGAAGAAGAAGATAAAGCCGGGAGCGAGGCTGGAGATAGTTTCCCAGCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025651.6 ENSMUST00000116542.9 ENSMUST00000142241.2 ENSMUST00000156291.2 |
||
| CDS-3UTR GCA 90 bp | AGCGAATCCCAGGCTGATGGGCATCTTTCAGGGCACAGTGAAATTAGAAGGAGCCGCTCCCCCAGTCTTTaGTTTCTTCTTAGCAGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: SESQADGHLSGHSEIRRSRSPSL*FLLSRP Trigger: GGGCCTGCTAAGAAGAAAGCAAAGACTGGGGGAGCG...GCTCCTTCTAATTTCACTGTGCCCTGAAAGATGCCCATCAGCCTGGGATTCGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000025651.6 ENSMUST00000116542.9 ENSMUST00000142241.2 ENSMUST00000156291.2 |
||
| CDS-3UTR CCA 90 bp | ACTCAGCAGGCAGCAAGTTCAAATTTCTGCCCACAAAAATCAGCTGGTCAGTACGATCCACAGCCCGCTTaGGCCCAATGCCACGGATGC | + |
|
Preference number: 4 (lower is better) Translates to: TQQAASSNFCPQKSAGQYDPQPA*AQCHGC Trigger: GCATCCGTGGCATTGGGCCCAAGCGGGCTGTGGATC...GTACTGACCAGCTGATTTTTGTGGGCAGAAATTTGAACTTGCTGCCTGCTGAGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000025651.6 ENSMUST00000116542.9 ENSMUST00000142241.2 ENSMUST00000156291.2 |
||
| CDS-3UTR CCA 90 bp | CTTCTCTCTGCTCGTCTCTTTGCAGTTCTTCCATCAGCGAATCCCAGGCTGATGTGCTGGGCTTCCTTGTaGAGCCAGTTCTCTGGAACG | + |
|
Preference number: 4 (lower is better) Translates to: LLSARLFAVLPSANPRLMCWASL*SQFSGT Trigger: CGTTCCAGAGAACTGGCTCCACAAGGAAGCCCAGCA...CATCAGCCTGGGATTCGCTGATGGAAGAACTGCAAAGAGACGAGCAGAGAGAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025651.6 ENSMUST00000116542.9 ENSMUST00000142241.2 ENSMUST00000156291.2 |
||
| CDS-3UTR GCA 90 bp | GACGAGGGACAAGAGGGATGTGCTGCAGCCGAGGGTACAAAACAGATAGACAGCTCAGCTGTGGTGGTTTaGCATCAAAGACGTACACAG | + |
|
Preference number: 4 (lower is better) Translates to: DEGQEGCAAAEGTKQIDSSAVVV*HQRRTQ Trigger: CTGTGTACGTCTTTGATGGCAAACCACCACAGCTGA...GCTGTCTATCTGTTTTGTACCCTCGGCTGCAGCACATCCCTCTTGTCCCTCGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025651.6 ENSMUST00000116542.9 ENSMUST00000142241.2 ENSMUST00000156291.2 |
||
| CDS-3UTR GCA 90 bp | GTCAGTCAGGTTCTAGTCACCTCTCCTCCACCAGCTGGCCAGCTGGGAAACTATCACTCATCATTGTGTTaGTTGGTGACCTTCACGAGC | + |
|
Preference number: 4 (lower is better) Translates to: VSQVLVTSPPPAGQLGNYHSSLC*LVTFTS Trigger: GCTCGTGAAGGTCACCAAGCAACACAATGATGAGTG...ATAGTTTCCCAGCTGGCCAGCTGGTGGAGGAGAGGTGACTAGAACCTGACTGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025651.6 ENSMUST00000116542.9 ENSMUST00000142241.2 ENSMUST00000156291.2 |
||
| CDS-3UTR GCA 90 bp | GACGAGGGACAAGAGGGATGTGCTGCAGCCGAGGGTACAAAACAGATAGACAGCGGCTCAGCAGGTGTTTaGACTCATCATTGTGTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: DEGQEGCAAAEGTKQIDSGSAGV*THHCVA Trigger: AGCAACACAATGATGAGTGCAAACACCTGCTGAGCC...GCTGTCTATCTGTTTTGTACCCTCGGCTGCAGCACATCCCTCTTGTCCCTCGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025651.6 ENSMUST00000116542.9 ENSMUST00000142241.2 ENSMUST00000156291.2 |
||
| CDS-3UTR GCA 90 bp | GACTCAGCAGGCAGCAAGTTCAAATTTCTGCCCACAAAAATCAGCTGGTCAGTATTCAGACCCAGCTCCTaGAGGACGCGGCTCAGATGG | + |
|
Preference number: 4 (lower is better) Translates to: DSAGSKFKFLPTKISWSVFRPSS*RTRLRW Trigger: CCATCTGAGCCGCGTCCTGCAGGAGCTGGGTCTGAA...TACTGACCAGCTGATTTTTGTGGGCAGAAATTTGAACTTGCTGCCTGCTGAGTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000025651.6 ENSMUST00000116542.9 ENSMUST00000142241.2 ENSMUST00000156291.2 |
||
| CDS-3UTR GCA 90 bp | CTCCCGGCTTTATCTTCTTCTTCCTTAAGACATTGCTCGCAGTTGCACAGAACATTCAGACCCAGCTCCTaGAGGACGCGGCTCAGATGG | + |
|
Preference number: 4 (lower is better) Translates to: LPALSSSSLRHCSQLHRTFRPSS*RTRLRW Trigger: CCATCTGAGCCGCGTCCTGCAGGAGCTGGGTCTGAA...TGTTCTGTGCAACTGCGAGCAATGTCTTAAGGAAGAAGAAGATAAAGCCGGGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025651.6 ENSMUST00000116542.9 ENSMUST00000142241.2 ENSMUST00000156291.2 |
||
| CDS-3UTR GCA 90 bp | CCCGGCTTTATCTTCTTCTTCCTTAAGACATTGCTCGCAGTTGCACAGAACAATCCCGCTTGGGCCCAATaGCACGGATGCTCTCGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: PGFIFFFLKTLLAVAQNNPAWAQ*HGCSRS Trigger: ACTGCGAGAGCATCCGTGGCATTGGGCCCAAGCGGG...ATTGTTCTGTGCAACTGCGAGCAATGTCTTAAGGAAGAAGAAGATAAAGCCGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025651.6 ENSMUST00000116542.9 ENSMUST00000142241.2 ENSMUST00000156291.2 |
||
| CDS-3UTR GCA 90 bp | AGACATTGCTCGCAGTTGCACAGAACAATGACTACAGTGTCCATTAACCTGAGACTGGAACGGGGTACTTaGTGGGGTCCAGCCGCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: RHCSQLHRTMTTVSINLRLERGT*WGPAAS Trigger: TGAGGCGGCTGGACCCCAGCAAGTACCCCGTTCCAG...TCTCAGGTTAATGGACACTGTAGTCATTGTTCTGTGCAACTGCGAGCAATGTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025651.6 ENSMUST00000116542.9 ENSMUST00000142241.2 ENSMUST00000156291.2 |
||
| CDS-3UTR TCA 90 bp | CCCGGCTTTATCTTCTTCTTCCTTAAGACATTGCTCGCAGTTGCACAGAACAATTCCATCCCAGCCTCCTaGGCCTGCTGCAGTTGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: PGFIFFFLKTLLAVAQNNSIPAS*ACCSCF Trigger: GAAGCAACTGCAGCAGGCTCAGGAGGCTGGGATGGA...ATTGTTCTGTGCAACTGCGAGCAATGTCTTAAGGAAGAAGAAGATAAAGCCGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025651.6 ENSMUST00000116542.9 ENSMUST00000142241.2 ENSMUST00000156291.2 |
||
| CDS-3UTR TCA 90 bp | AGTGAAATTAGAAGGAGCAGTAGTCAGTCAGGTTCTAGTCACCTCTCCTCCACCTCACGAGCCTCTTGGTaGACTTCTCCACCTCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SEIRRSSSQSGSSHLSSTSRASW*TSPPPP Trigger: AGGAGGAGGTGGAGAAGTTCACCAAGAGGCTCGTGA...GGTGGAGGAGAGGTGACTAGAACCTGACTGACTACTGCTCCTTCTAATTTCACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025651.6 ENSMUST00000116542.9 ENSMUST00000142241.2 ENSMUST00000156291.2 |
||
| CDS-3UTR GCA 90 bp | CCAGCTGGGAAACTATCTCCAGCCTCGCTCCCGGCTTTATCTTCTTCTTCCTTATCAGGAACTGGTAGATaGTCATGGAGGCATCGATGG | + |
|
Preference number: 4 (lower is better) Translates to: PAGKLSPASLPALSSSSLSGTGR*SWRHRW Trigger: CCATCGATGCCTCCATGAGCATCTACCAGTTCCTGA...TAAGGAAGAAGAAGATAAAGCCGGGAGCGAGGCTGGAGATAGTTTCCCAGCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025651.6 ENSMUST00000116542.9 ENSMUST00000142241.2 ENSMUST00000156291.2 |
||
| CDS-3UTR GCA 90 bp | CTCCCGGCTTTATCTTCTTCTTCCTTAAGACATTGCTCGCAGTTGCACAGAACACCGCAGCATAGACTTTaGCAGCCTTTGCCAGGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LPALSSSSLRHCSQLHRTPQHRL*QPLPGQ Trigger: CTGCCCTGGCAAAGGCTGGCAAAGTCTATGCTGCGG...TGTTCTGTGCAACTGCGAGCAATGTCTTAAGGAAGAAGAAGATAAAGCCGGGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025651.6 ENSMUST00000116542.9 ENSMUST00000142241.2 ENSMUST00000156291.2 |
||
| CDS-3UTR GCA 90 bp | TTCAAATTTCTGCCCACAAAAATCAGCTGGTCAGTACTAAATCTGTTGTCAGCCGGCGTCCCTGGGTGCTaGCCTGGCGGCTCTTACTCA | + |
|
Preference number: 4 (lower is better) Translates to: FKFLPTKISWSVLNLLSAGVPGC*PGGSYS Trigger: TGAGTAAGAGCCGCCAGGGCAGCACCCAGGGACGCC...GGCTGACAACAGATTTAGTACTGACCAGCTGATTTTTGTGGGCAGAAATTTGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000025651.6 ENSMUST00000116542.9 ENSMUST00000142241.2 ENSMUST00000156291.2 |
||
| CDS-3UTR CCA 90 bp | AGTGAAATTAGAAGGAGCAGTAGTCAGTCAGGTTCTAGTCACCTCTCCTCCACCTCCACAAACTGCTCCTaGTTCAGACCCAGCTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SEIRRSSSQSGSSHLSSTSTNCS*FRPSSC Trigger: GCAGGAGCTGGGTCTGAACCAGGAGCAGTTTGTGGA...GGTGGAGGAGAGGTGACTAGAACCTGACTGACTACTGCTCCTTCTAATTTCACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025651.6 ENSMUST00000116542.9 ENSMUST00000142241.2 ENSMUST00000156291.2 |
||
| CDS-3UTR CCA 90 bp | CCTGCACAACTACTGGACTCAGCAGGCAGCAAGTTCAAATTTCTGCCCACAAAATCCACAAACTGCTCCTaGTTCAGACCCAGCTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: PAQLLDSAGSKFKFLPTKSTNCS*FRPSSC Trigger: GCAGGAGCTGGGTCTGAACCAGGAGCAGTTTGTGGA...TTTTGTGGGCAGAAATTTGAACTTGCTGCCTGCTGAGTCCAGTAGTTGTGCAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025651.6 ENSMUST00000116542.9 ENSMUST00000142241.2 ENSMUST00000156291.2 |
||
| CDS-3UTR TCA 90 bp | ACTCAGCAGGCAGCAAGTTCAAATTTCTGCCCACAAAAATCAGCTGGTCAGTACTCACGAGCCTCTTGGTaGACTTCTCCACCTCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: TQQAASSNFCPQKSAGQYSRASW*TSPPPP Trigger: AGGAGGAGGTGGAGAAGTTCACCAAGAGGCTCGTGA...GTACTGACCAGCTGATTTTTGTGGGCAGAAATTTGAACTTGCTGCCTGCTGAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000025651.6 ENSMUST00000116542.9 ENSMUST00000142241.2 ENSMUST00000156291.2 |
||
| CDS-3UTR GCA 90 bp | CCAGCTGGGAAACTATCTCCAGCCTCGCTCCCGGCTTTATCTTCTTCTTCCTTATCAGCTGTGGTGGTTTaGCATCAAAGACGTACACAG | + |
|
Preference number: 4 (lower is better) Translates to: PAGKLSPASLPALSSSSLSAVVV*HQRRTQ Trigger: CTGTGTACGTCTTTGATGGCAAACCACCACAGCTGA...TAAGGAAGAAGAAGATAAAGCCGGGAGCGAGGCTGGAGATAGTTTCCCAGCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025651.6 ENSMUST00000116542.9 ENSMUST00000142241.2 ENSMUST00000156291.2 |
||
| CDS-3UTR GCA 90 bp | CTTCTCTCTGCTCGTCTCTTTGCAGTTCTTCCATCAGCGAATCCCAGGCTGATGGGCTCAGCAGGTGTTTaGACTCATCATTGTGTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: LLSARLFAVLPSANPRLMGSAGV*THHCVA Trigger: AGCAACACAATGATGAGTGCAAACACCTGCTGAGCC...CATCAGCCTGGGATTCGCTGATGGAAGAACTGCAAAGAGACGAGCAGAGAGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025651.6 ENSMUST00000116542.9 ENSMUST00000142241.2 ENSMUST00000156291.2 |
||
| CDS-3UTR GCA 90 bp | CCTATGAACAACAGTTTCTTCTCCCAAAACCTCAATTCAATTGATTGCCTCAGAGGCGTCCCTGGGTGCTaGCCTGGCGGCTCTTACTCA | + |
|
Preference number: 4 (lower is better) Translates to: PMNNSFFSQNLNSIDCLRGVPGC*PGGSYS Trigger: TGAGTAAGAGCCGCCAGGGCAGCACCCAGGGACGCC...TCTGAGGCAATCAATTGAATTGAGGTTTTGGGAGAAGAAACTGTTGTTCATAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025651.6 ENSMUST00000116542.9 ENSMUST00000142241.2 ENSMUST00000156291.2 |
||
| CDS-3UTR GCA 90 bp | CTCAGCAGGCAGCAAGTTCAAATTTCTGCCCACAAAAATCAGCTGGTCAGTACTCGCTCCCCCAGTCTTTaGTTTCTTCTTAGCAGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: LSRQQVQISAHKNQLVSTRSPSL*FLLSRP Trigger: GGGCCTGCTAAGAAGAAAGCAAAGACTGGGGGAGCG...AGTACTGACCAGCTGATTTTTGTGGGCAGAAATTTGAACTTGCTGCCTGCTGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000025651.6 ENSMUST00000116542.9 ENSMUST00000142241.2 ENSMUST00000156291.2 |
||
| CDS-3UTR GCA 90 bp | GACTCAGCAGGCAGCAAGTTCAAATTTCTGCCCACAAAAATCAGCTGGTCAGTACGCTCCCCCAGTCTTTaGTTTCTTCTTAGCAGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: DSAGSKFKFLPTKISWSVRSPSL*FLLSRP Trigger: GGGCCTGCTAAGAAGAAAGCAAAGACTGGGGGAGCG...TACTGACCAGCTGATTTTTGTGGGCAGAAATTTGAACTTGCTGCCTGCTGAGTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000025651.6 ENSMUST00000116542.9 ENSMUST00000142241.2 ENSMUST00000156291.2 |
||
| CDS-3UTR CCA 90 bp | CTCCCGGCTTTATCTTCTTCTTCCTTAAGACATTGCTCGCAGTTGCACAGAACATGGGTCCAGTACTTCTaGCTCCAGGAAGAGCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LPALSSSSLRHCSQLHRTWVQYF*LQEELL Trigger: CAGCAGCTCTTCCTGGAGCCAGAAGTACTGGACCCA...TGTTCTGTGCAACTGCGAGCAATGTCTTAAGGAAGAAGAAGATAAAGCCGGGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025651.6 ENSMUST00000116542.9 ENSMUST00000142241.2 ENSMUST00000156291.2 |
||
| CDS-3UTR TCA 90 bp | AGTGAAATTAGAAGGAGCAGTAGTCAGTCAGGTTCTAGTCACCTCTCCTCCACCAGACGTACACAGGCTTaGTGCCATTCTCCATCATGC | + |
|
Preference number: 4 (lower is better) Translates to: SEIRRSSSQSGSSHLSSTRRTQA*CHSPSC Trigger: GCATGATGGAGAATGGCATCAAGCCTGTGTACGTCT...GGTGGAGGAGAGGTGACTAGAACCTGACTGACTACTGCTCCTTCTAATTTCACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025651.6 ENSMUST00000116542.9 ENSMUST00000142241.2 ENSMUST00000156291.2 |
||
| CDS-3UTR CCA 90 bp | ACTCAGCAGGCAGCAAGTTCAAATTTCTGCCCACAAAAATCAGCTGGTCAGTACGATGGAACTCTTGGATaGGCAGCTTCTTGGCCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: TQQAASSNFCPQKSAGQYDGTLG*AASWPH Trigger: GTGAGGCCAAGAAGCTGCCCATCCAAGAGTTCCATC...GTACTGACCAGCTGATTTTTGTGGGCAGAAATTTGAACTTGCTGCCTGCTGAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000025651.6 ENSMUST00000116542.9 ENSMUST00000142241.2 ENSMUST00000156291.2 |
||
| CDS-3UTR CCA 90 bp | CCTATGAACAACAGTTTCTTCTCCCAAAACCTCAATTCAATTGATTGCCTCAGAGATCCACAGCCCGCTTaGGCCCAATGCCACGGATGC | + |
|
Preference number: 4 (lower is better) Translates to: PMNNSFFSQNLNSIDCLRDPQPA*AQCHGC Trigger: GCATCCGTGGCATTGGGCCCAAGCGGGCTGTGGATC...TCTGAGGCAATCAATTGAATTGAGGTTTTGGGAGAAGAAACTGTTGTTCATAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025651.6 ENSMUST00000116542.9 ENSMUST00000142241.2 ENSMUST00000156291.2 |
||
| CDS-3UTR CCA 90 bp | CCCGGCTTTATCTTCTTCTTCCTTAAGACATTGCTCGCAGTTGCACAGAACAATTGCTGGGCTTCCTTGTaGAGCCAGTTCTCTGGAACG | + |
|
Preference number: 4 (lower is better) Translates to: PGFIFFFLKTLLAVAQNNCWASL*SQFSGT Trigger: CGTTCCAGAGAACTGGCTCCACAAGGAAGCCCAGCA...ATTGTTCTGTGCAACTGCGAGCAATGTCTTAAGGAAGAAGAAGATAAAGCCGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025651.6 ENSMUST00000116542.9 ENSMUST00000142241.2 ENSMUST00000156291.2 |
||
| CDS-3UTR CCA 90 bp | CATCTTTCAGGGCACAGTGAAATTAGAAGGAGCAGTAGTCAGTCAGGTTCTAGTTGCTGGGCTTCCTTGTaGAGCCAGTTCTCTGGAACG | + |
|
Preference number: 4 (lower is better) Translates to: HLSGHSEIRRSSSQSGSSCWASL*SQFSGT Trigger: CGTTCCAGAGAACTGGCTCCACAAGGAAGCCCAGCA...ACTAGAACCTGACTGACTACTGCTCCTTCTAATTTCACTGTGCCCTGAAAGATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025651.6 ENSMUST00000116542.9 ENSMUST00000142241.2 ENSMUST00000156291.2 |
||
| CDS-3UTR GCA 90 bp | GACTCAGCAGGCAGCAAGTTCAAATTTCTGCCCACAAAAATCAGCTGGTCAGTATCAGGAACTGGTAGATaGTCATGGAGGCATCGATGG | + |
|
Preference number: 4 (lower is better) Translates to: DSAGSKFKFLPTKISWSVSGTGR*SWRHRW Trigger: CCATCGATGCCTCCATGAGCATCTACCAGTTCCTGA...TACTGACCAGCTGATTTTTGTGGGCAGAAATTTGAACTTGCTGCCTGCTGAGTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000025651.6 ENSMUST00000116542.9 ENSMUST00000142241.2 ENSMUST00000156291.2 |
||
| CDS-3UTR GCA 90 bp | CTCCCGGCTTTATCTTCTTCTTCCTTAAGACATTGCTCGCAGTTGCACAGAACATCAGGAACTGGTAGATaGTCATGGAGGCATCGATGG | + |
|
Preference number: 4 (lower is better) Translates to: LPALSSSSLRHCSQLHRTSGTGR*SWRHRW Trigger: CCATCGATGCCTCCATGAGCATCTACCAGTTCCTGA...TGTTCTGTGCAACTGCGAGCAATGTCTTAAGGAAGAAGAAGATAAAGCCGGGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025651.6 ENSMUST00000116542.9 ENSMUST00000142241.2 ENSMUST00000156291.2 |
||
| CDS-3UTR GCA 90 bp | AGTGAAATTAGAAGGAGCAGTAGTCAGTCAGGTTCTAGTCACCTCTCCTCCACCGGCTCAGCAGGTGTTTaGACTCATCATTGTGTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: SEIRRSSSQSGSSHLSSTGSAGV*THHCVA Trigger: AGCAACACAATGATGAGTGCAAACACCTGCTGAGCC...GGTGGAGGAGAGGTGACTAGAACCTGACTGACTACTGCTCCTTCTAATTTCACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025651.6 ENSMUST00000116542.9 ENSMUST00000142241.2 ENSMUST00000156291.2 |
||
| CDS-3UTR GCA 90 bp | TTCAAATTTCTGCCCACAAAAATCAGCTGGTCAGTACTAAATCTGTTGTCAGCCCCGCAGCATAGACTTTaGCAGCCTTTGCCAGGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: FKFLPTKISWSVLNLLSAPQHRL*QPLPGQ Trigger: CTGCCCTGGCAAAGGCTGGCAAAGTCTATGCTGCGG...GGCTGACAACAGATTTAGTACTGACCAGCTGATTTTTGTGGGCAGAAATTTGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000025651.6 ENSMUST00000116542.9 ENSMUST00000142241.2 ENSMUST00000156291.2 |
||
| CDS-3UTR GCA 90 bp | CTCAGCAGGCAGCAAGTTCAAATTTCTGCCCACAAAAATCAGCTGGTCAGTACTCACTCATCATTGTGTTaGTTGGTGACCTTCACGAGC | + |
|
Preference number: 4 (lower is better) Translates to: LSRQQVQISAHKNQLVSTHSSLC*LVTFTS Trigger: GCTCGTGAAGGTCACCAAGCAACACAATGATGAGTG...AGTACTGACCAGCTGATTTTTGTGGGCAGAAATTTGAACTTGCTGCCTGCTGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000025651.6 ENSMUST00000116542.9 ENSMUST00000142241.2 ENSMUST00000156291.2 |
||
| CDS-3UTR GCA 90 bp | CTCCCGGCTTTATCTTCTTCTTCCTTAAGACATTGCTCGCAGTTGCACAGAACACACTCATCATTGTGTTaGTTGGTGACCTTCACGAGC | + |
|
Preference number: 4 (lower is better) Translates to: LPALSSSSLRHCSQLHRTHSSLC*LVTFTS Trigger: GCTCGTGAAGGTCACCAAGCAACACAATGATGAGTG...TGTTCTGTGCAACTGCGAGCAATGTCTTAAGGAAGAAGAAGATAAAGCCGGGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025651.6 ENSMUST00000116542.9 ENSMUST00000142241.2 ENSMUST00000156291.2 |
||
| CDS-3UTR GCA 90 bp | CTCCCGGCTTTATCTTCTTCTTCCTTAAGACATTGCTCGCAGTTGCACAGAACAGGCTCAGCAGGTGTTTaGACTCATCATTGTGTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: LPALSSSSLRHCSQLHRTGSAGV*THHCVA Trigger: AGCAACACAATGATGAGTGCAAACACCTGCTGAGCC...TGTTCTGTGCAACTGCGAGCAATGTCTTAAGGAAGAAGAAGATAAAGCCGGGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025651.6 ENSMUST00000116542.9 ENSMUST00000142241.2 ENSMUST00000156291.2 |
||
| CDS-3UTR GCA 90 bp | CCTATGAACAACAGTTTCTTCTCCCAAAACCTCAATTCAATTGATTGCCTCAGACCGCAGCATAGACTTTaGCAGCCTTTGCCAGGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: PMNNSFFSQNLNSIDCLRPQHRL*QPLPGQ Trigger: CTGCCCTGGCAAAGGCTGGCAAAGTCTATGCTGCGG...TCTGAGGCAATCAATTGAATTGAGGTTTTGGGAGAAGAAACTGTTGTTCATAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025651.6 ENSMUST00000116542.9 ENSMUST00000142241.2 ENSMUST00000156291.2 |
||
| CDS-3UTR GCA 90 bp | GTTCAAATTTCTGCCCACAAAAATCAGCTGGTCAGTACTAAATCTGTTGTCAGCCGCTCCCCCAGTCTTTaGTTTCTTCTTAGCAGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: VQISAHKNQLVSTKSVVSRSPSL*FLLSRP Trigger: GGGCCTGCTAAGAAGAAAGCAAAGACTGGGGGAGCG...GCTGACAACAGATTTAGTACTGACCAGCTGATTTTTGTGGGCAGAAATTTGAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000025651.6 ENSMUST00000116542.9 ENSMUST00000142241.2 ENSMUST00000156291.2 |
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| CDS-3UTR CCA 90 bp | GACTCAGCAGGCAGCAAGTTCAAATTTCTGCCCACAAAAATCAGCTGGTCAGTAGCTTCTTGGCCTCACTaGCAGTTAAGTGTCGCATTA | + |
|
Preference number: 4 (lower is better) Translates to: DSAGSKFKFLPTKISWSVASWPH*QLSVAL Trigger: TAATGCGACACTTAACTGCCAGTGAGGCCAAGAAGC...TACTGACCAGCTGATTTTTGTGGGCAGAAATTTGAACTTGCTGCCTGCTGAGTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000025651.6 ENSMUST00000116542.9 ENSMUST00000142241.2 ENSMUST00000156291.2 |
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| CDS-3UTR CCA 90 bp | AAAACCTCAATTCAATTGATTGCCTCAGAAAGGCTGTCAGAACATCACTTGGAGTCCACAAACTGCTCCTaGTTCAGACCCAGCTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: KTSIQLIASERLSEHHLESTNCS*FRPSSC Trigger: GCAGGAGCTGGGTCTGAACCAGGAGCAGTTTGTGGA...CTCCAAGTGATGTTCTGACAGCCTTTCTGAGGCAATCAATTGAATTGAGGTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025651.6 ENSMUST00000116542.9 ENSMUST00000142241.2 ENSMUST00000156291.2 |
||
| CDS-3UTR CCA 90 bp | GTTCAAATTTCTGCCCACAAAAATCAGCTGGTCAGTACTAAATCTGTTGTCAGCTCCACAAACTGCTCCTaGTTCAGACCCAGCTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: VQISAHKNQLVSTKSVVSSTNCS*FRPSSC Trigger: GCAGGAGCTGGGTCTGAACCAGGAGCAGTTTGTGGA...GCTGACAACAGATTTAGTACTGACCAGCTGATTTTTGTGGGCAGAAATTTGAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000025651.6 ENSMUST00000116542.9 ENSMUST00000142241.2 ENSMUST00000156291.2 |
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| 3UTR CAA 72 bp | CTGCCCACAAAAATCAGCTGGTCAGTACTAAATCTGTaGTCAGCCAGACTTCTCTCTGCTCGTCTCTTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: LPTKISWSVLNL*SARLLSARLFA Trigger: TGCAAAGAGACGAGCAGAGAGAAGTCTGGCTGACAACAGATTTAGTACTGACCAGCTGATTTTTGTGGGCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000025651.6 ENSMUST00000116542.9 ENSMUST00000142241.2 ENSMUST00000156291.2 |
||
| 3UTR CAA 72 bp | CAATTGATTGCCTCAGAAAGGCTGTCAGAACATCACTaGGAGGCACAGGTCAGTGGCACACTTAATGCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: QLIASERLSEHH*EAQVSGTLNAF Trigger: AAAGGCATTAAGTGTGCCACTGACCTGTGCCTCCAAGTGATGTTCTGACAGCCTTTCTGAGGCAATCAATTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025651.6 ENSMUST00000116542.9 ENSMUST00000142241.2 ENSMUST00000156291.2 |
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| CDS-3UTR GCA 90 bp | AGACATTGCTCGCAGTTGCACAGAACAATGACTACAGTGTCCATTAACCTGAGACACTCATCATTGTGTTaGTTGGTGACCTTCACGAGC | + |
|
Preference number: 4 (lower is better) Translates to: RHCSQLHRTMTTVSINLRHSSLC*LVTFTS Trigger: GCTCGTGAAGGTCACCAAGCAACACAATGATGAGTG...TCTCAGGTTAATGGACACTGTAGTCATTGTTCTGTGCAACTGCGAGCAATGTCT 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025651.6 ENSMUST00000116542.9 ENSMUST00000142241.2 ENSMUST00000156291.2 |
||
| CDS-3UTR CCA 90 bp | CCCGGCTTTATCTTCTTCTTCCTTAAGACATTGCTCGCAGTTGCACAGAACAATGCTTCTTGGCCTCACTaGCAGTTAAGTGTCGCATTA | + |
|
Preference number: 4 (lower is better) Translates to: PGFIFFFLKTLLAVAQNNASWPH*QLSVAL Trigger: TAATGCGACACTTAACTGCCAGTGAGGCCAAGAAGC...ATTGTTCTGTGCAACTGCGAGCAATGTCTTAAGGAAGAAGAAGATAAAGCCGGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025651.6 ENSMUST00000116542.9 ENSMUST00000142241.2 ENSMUST00000156291.2 |
||
| CDS-3UTR TCA 90 bp | GTTCAAATTTCTGCCCACAAAAATCAGCTGGTCAGTACTAAATCTGTTGTCAGCAGACGTACACAGGCTTaGTGCCATTCTCCATCATGC | + |
|
Preference number: 4 (lower is better) Translates to: VQISAHKNQLVSTKSVVSRRTQA*CHSPSC Trigger: GCATGATGGAGAATGGCATCAAGCCTGTGTACGTCT...GCTGACAACAGATTTAGTACTGACCAGCTGATTTTTGTGGGCAGAAATTTGAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000025651.6 ENSMUST00000116542.9 ENSMUST00000142241.2 ENSMUST00000156291.2 |
||
| CDS-3UTR GCA 90 bp | TTCAAATTTCTGCCCACAAAAATCAGCTGGTCAGTACTAAATCTGTTGTCAGCCTGCCATTCTCCATCATaGGGATGGTACGGTAGAACA | + |
|
Preference number: 4 (lower is better) Translates to: FKFLPTKISWSVLNLLSACHSPS*GWYGRT Trigger: TGTTCTACCGTACCATCCGCATGATGGAGAATGGCA...GGCTGACAACAGATTTAGTACTGACCAGCTGATTTTTGTGGGCAGAAATTTGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000025651.6 ENSMUST00000116542.9 ENSMUST00000142241.2 ENSMUST00000156291.2 |
||
| CDS-3UTR GCA 90 bp | AAAACCTCAATTCAATTGATTGCCTCAGAAAGGCTGTCAGAACATCACTTGGAGTCAGCTGTGGTGGTTTaGCATCAAAGACGTACACAG | + |
|
Preference number: 4 (lower is better) Translates to: KTSIQLIASERLSEHHLESAVVV*HQRRTQ Trigger: CTGTGTACGTCTTTGATGGCAAACCACCACAGCTGA...CTCCAAGTGATGTTCTGACAGCCTTTCTGAGGCAATCAATTGAATTGAGGTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025651.6 ENSMUST00000116542.9 ENSMUST00000142241.2 ENSMUST00000156291.2 |
||
| CDS-3UTR CCA 90 bp | AAAACCTCAATTCAATTGATTGCCTCAGAAAGGCTGTCAGAACATCACTTGGAGGCTTCTTGGCCTCACTaGCAGTTAAGTGTCGCATTA | + |
|
Preference number: 4 (lower is better) Translates to: KTSIQLIASERLSEHHLEASWPH*QLSVAL Trigger: TAATGCGACACTTAACTGCCAGTGAGGCCAAGAAGC...CTCCAAGTGATGTTCTGACAGCCTTTCTGAGGCAATCAATTGAATTGAGGTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025651.6 ENSMUST00000116542.9 ENSMUST00000142241.2 ENSMUST00000156291.2 |
||
| 3UTR CAA 72 bp | GCTTTATCTTCTTCTTCCTTAAGACATTGCTCGCAGTaGCACAGAACAATGACTACAGTGTCCATTAACCTG | + |
|
Preference number: 4 (lower is better) Translates to: ALSSSSLRHCSQ*HRTMTTVSINL Trigger: CAGGTTAATGGACACTGTAGTCATTGTTCTGTGCAACTGCGAGCAATGTCTTAAGGAAGAAGAAGATAAAGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025651.6 ENSMUST00000116542.9 ENSMUST00000142241.2 ENSMUST00000156291.2 |
||
| CDS-3UTR GCA 90 bp | AAGTTCAAATTTCTGCCCACAAAAATCAGCTGGTCAGTACTAAATCTGTTGTCATGCCATTCTCCATCATaGGGATGGTACGGTAGAACA | + |
|
Preference number: 4 (lower is better) Translates to: KFKFLPTKISWSVLNLLSCHSPS*GWYGRT Trigger: TGTTCTACCGTACCATCCGCATGATGGAGAATGGCA...TGACAACAGATTTAGTACTGACCAGCTGATTTTTGTGGGCAGAAATTTGAACTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000025651.6 ENSMUST00000116542.9 ENSMUST00000142241.2 ENSMUST00000156291.2 |
||
| CDS-3UTR CAA 90 bp | TCCTGCCACAGGGTCAAGAGAGGGAAAGCTCTGAAGGGCAGCGCTGGGAAGCAAAGCTGCTGGGCTTCCTaGTGGAGCCAGTTCTCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: SCHRVKRGKALKGSAGKQSCWAS*WSQFSG Trigger: TCCAGAGAACTGGCTCCACAAGGAAGCCCAGCAGCT...TTGCTTCCCAGCGCTGCCCTTCAGAGCTTTCCCTCTCTTGACCCTGTGGCAGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025651.6 ENSMUST00000116542.9 ENSMUST00000142241.2 ENSMUST00000156291.2 |
||
| CDS-3UTR CAA 90 bp | TCCTGCCACAGGGTCAAGAGAGGGAAAGCTCTGAAGGGCAGCGCTGGGAAGCAAGCTCAGATGGAACTCTaGGATGGGCAGCTTCTTGGC | + |
|
Preference number: 5 (lower is better) Translates to: SCHRVKRGKALKGSAGKQAQMEL*DGQLLG Trigger: GCCAAGAAGCTGCCCATCCAAGAGTTCCATCTGAGC...TTGCTTCCCAGCGCTGCCCTTCAGAGCTTTCCCTCTCTTGACCCTGTGGCAGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025651.6 ENSMUST00000116542.9 ENSMUST00000142241.2 ENSMUST00000156291.2 |
||
| CDS-3UTR CAA 90 bp | GTCAGTCAGGTTCTAGTCACCTCTCCTCCACCAGCTGGCCAGCTGGGAAACTATAGCTGCTGGGCTTCCTaGTGGAGCCAGTTCTCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: VSQVLVTSPPPAGQLGNYSCWAS*WSQFSG Trigger: TCCAGAGAACTGGCTCCACAAGGAAGCCCAGCAGCT...ATAGTTTCCCAGCTGGCCAGCTGGTGGAGGAGAGGTGACTAGAACCTGACTGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025651.6 ENSMUST00000116542.9 ENSMUST00000142241.2 ENSMUST00000156291.2 |
||
| CDS-3UTR CAA 90 bp | TGGGAAGCAATGAACTCTCCTCAAGACGAGGGACAAGAGGGATGTGCTGCAGCCGCTCAGATGGAACTCTaGGATGGGCAGCTTCTTGGC | + |
|
Preference number: 5 (lower is better) Translates to: WEAMNSPQDEGQEGCAAAAQMEL*DGQLLG Trigger: GCCAAGAAGCTGCCCATCCAAGAGTTCCATCTGAGC...GGCTGCAGCACATCCCTCTTGTCCCTCGTCTTGAGGAGAGTTCATTGCTTCCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025651.6 ENSMUST00000116542.9 ENSMUST00000142241.2 ENSMUST00000156291.2 |
||
| CDS-3UTR CAA 90 bp | TTGATTGCCTCAGAAAGGCTGTCAGAACATCACTTGGAGGCACAGGTCAGTGGCGCTCAGATGGAACTCTaGGATGGGCAGCTTCTTGGC | + |
|
Preference number: 5 (lower is better) Translates to: LIASERLSEHHLEAQVSGAQMEL*DGQLLG Trigger: GCCAAGAAGCTGCCCATCCAAGAGTTCCATCTGAGC...GCCACTGACCTGTGCCTCCAAGTGATGTTCTGACAGCCTTTCTGAGGCAATCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025651.6 ENSMUST00000116542.9 ENSMUST00000142241.2 ENSMUST00000156291.2 |
||
| CDS-3UTR CAA 90 bp | CTCCCGGCTTTATCTTCTTCTTCCTTAAGACATTGCTCGCAGTTGCACAGAACATTCTTAGCAGGCCCCTaGGGTTCTGGCTCCTTGCGC | + |
|
Preference number: 5 (lower is better) Translates to: LPALSSSSLRHCSQLHRTFLAGP*GSGSLR Trigger: GCGCAAGGAGCCAGAACCCAAGGGGCCTGCTAAGAA...TGTTCTGTGCAACTGCGAGCAATGTCTTAAGGAAGAAGAAGATAAAGCCGGGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025651.6 ENSMUST00000116542.9 ENSMUST00000142241.2 ENSMUST00000156291.2 |
||
| CDS-3UTR CAA 90 bp | GACTCAGCAGGCAGCAAGTTCAAATTTCTGCCCACAAAAATCAGCTGGTCAGTATTCTTAGCAGGCCCCTaGGGTTCTGGCTCCTTGCGC | + |
|
Preference number: 5 (lower is better) Translates to: DSAGSKFKFLPTKISWSVFLAGP*GSGSLR Trigger: GCGCAAGGAGCCAGAACCCAAGGGGCCTGCTAAGAA...TACTGACCAGCTGATTTTTGTGGGCAGAAATTTGAACTTGCTGCCTGCTGAGTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000025651.6 ENSMUST00000116542.9 ENSMUST00000142241.2 ENSMUST00000156291.2 |
||
| CDS-3UTR CAA 90 bp | GACTCAGCAGGCAGCAAGTTCAAATTTCTGCCCACAAAAATCAGCTGGTCAGTAAGCTGCTGGGCTTCCTaGTGGAGCCAGTTCTCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: DSAGSKFKFLPTKISWSVSCWAS*WSQFSG Trigger: TCCAGAGAACTGGCTCCACAAGGAAGCCCAGCAGCT...TACTGACCAGCTGATTTTTGTGGGCAGAAATTTGAACTTGCTGCCTGCTGAGTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000025651.6 ENSMUST00000116542.9 ENSMUST00000142241.2 ENSMUST00000156291.2 |
||
| CDS-3UTR CAA 90 bp | CATCTTTCAGGGCACAGTGAAATTAGAAGGAGCAGTAGTCAGTCAGGTTCTAGTTTCTTAGCAGGCCCCTaGGGTTCTGGCTCCTTGCGC | + |
|
Preference number: 5 (lower is better) Translates to: HLSGHSEIRRSSSQSGSSFLAGP*GSGSLR Trigger: GCGCAAGGAGCCAGAACCCAAGGGGCCTGCTAAGAA...ACTAGAACCTGACTGACTACTGCTCCTTCTAATTTCACTGTGCCCTGAAAGATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025651.6 ENSMUST00000116542.9 ENSMUST00000142241.2 ENSMUST00000156291.2 |
||
| CDS-3UTR CAA 90 bp | CTCCCGGCTTTATCTTCTTCTTCCTTAAGACATTGCTCGCAGTTGCACAGAACAACCTTCACGAGCCTCTaGGTGAACTTCTCCACCTCC | + |
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Preference number: 5 (lower is better) Translates to: LPALSSSSLRHCSQLHRTTFTSL*VNFSTS Trigger: GGAGGTGGAGAAGTTCACCAAGAGGCTCGTGAAGGT...TGTTCTGTGCAACTGCGAGCAATGTCTTAAGGAAGAAGAAGATAAAGCCGGGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025651.6 ENSMUST00000116542.9 ENSMUST00000142241.2 ENSMUST00000156291.2 |
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| CDS-3UTR CAA 90 bp | CTCAGCAGGCAGCAAGTTCAAATTTCTGCCCACAAAAATCAGCTGGTCAGTACTACCTTCACGAGCCTCTaGGTGAACTTCTCCACCTCC | + |
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Preference number: 5 (lower is better) Translates to: LSRQQVQISAHKNQLVSTTFTSL*VNFSTS Trigger: GGAGGTGGAGAAGTTCACCAAGAGGCTCGTGAAGGT...AGTACTGACCAGCTGATTTTTGTGGGCAGAAATTTGAACTTGCTGCCTGCTGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000025651.6 ENSMUST00000116542.9 ENSMUST00000142241.2 ENSMUST00000156291.2 |
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| CDS-3UTR CAA 90 bp | ACTCAGCAGGCAGCAAGTTCAAATTTCTGCCCACAAAAATCAGCTGGTCAGTACGCTCAGATGGAACTCTaGGATGGGCAGCTTCTTGGC | + |
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Preference number: 5 (lower is better) Translates to: TQQAASSNFCPQKSAGQYAQMEL*DGQLLG Trigger: GCCAAGAAGCTGCCCATCCAAGAGTTCCATCTGAGC...GTACTGACCAGCTGATTTTTGTGGGCAGAAATTTGAACTTGCTGCCTGCTGAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000025651.6 ENSMUST00000116542.9 ENSMUST00000142241.2 ENSMUST00000156291.2 |
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| CDS-3UTR CAA 90 bp | AGTGAAATTAGAAGGAGCAGTAGTCAGTCAGGTTCTAGTCACCTCTCCTCCACCAAGACGTACACAGGCTaGATGCCATTCTCCATCATG | + |
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Preference number: 5 (lower is better) Translates to: SEIRRSSSQSGSSHLSSTKTYTG*MPFSIM Trigger: CATGATGGAGAATGGCATCAAGCCTGTGTACGTCTT...GGTGGAGGAGAGGTGACTAGAACCTGACTGACTACTGCTCCTTCTAATTTCACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025651.6 ENSMUST00000116542.9 ENSMUST00000142241.2 ENSMUST00000156291.2 |
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| CDS-3UTR CAA 90 bp | CTCAGCAGGCAGCAAGTTCAAATTTCTGCCCACAAAAATCAGCTGGTCAGTACTAAGACGTACACAGGCTaGATGCCATTCTCCATCATG | + |
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Preference number: 5 (lower is better) Translates to: LSRQQVQISAHKNQLVSTKTYTG*MPFSIM Trigger: CATGATGGAGAATGGCATCAAGCCTGTGTACGTCTT...AGTACTGACCAGCTGATTTTTGTGGGCAGAAATTTGAACTTGCTGCCTGCTGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000025651.6 ENSMUST00000116542.9 ENSMUST00000142241.2 ENSMUST00000156291.2 |
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| CDS-3UTR CAA 90 bp | CCCGGCTTTATCTTCTTCTTCCTTAAGACATTGCTCGCAGTTGCACAGAACAATAAGACGTACACAGGCTaGATGCCATTCTCCATCATG | + |
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Preference number: 5 (lower is better) Translates to: PGFIFFFLKTLLAVAQNNKTYTG*MPFSIM Trigger: CATGATGGAGAATGGCATCAAGCCTGTGTACGTCTT...ATTGTTCTGTGCAACTGCGAGCAATGTCTTAAGGAAGAAGAAGATAAAGCCGGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025651.6 ENSMUST00000116542.9 ENSMUST00000142241.2 ENSMUST00000156291.2 |
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| CDS-3UTR CAA 90 bp | AGACATTGCTCGCAGTTGCACAGAACAATGACTACAGTGTCCATTAACCTGAGATTCAGCTGTGGTGGTTaGCCATCAAAGACGTACACA | + |
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Preference number: 5 (lower is better) Translates to: RHCSQLHRTMTTVSINLRFSCGG*PSKTYT Trigger: TGTGTACGTCTTTGATGGCAAACCACCACAGCTGAA...TCTCAGGTTAATGGACACTGTAGTCATTGTTCTGTGCAACTGCGAGCAATGTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025651.6 ENSMUST00000116542.9 ENSMUST00000142241.2 ENSMUST00000156291.2 |
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| CDS-3UTR CAA 90 bp | CCTATGAACAACAGTTTCTTCTCCCAAAACCTCAATTCAATTGATTGCCTCAGAACCTTCACGAGCCTCTaGGTGAACTTCTCCACCTCC | + |
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Preference number: 5 (lower is better) Translates to: PMNNSFFSQNLNSIDCLRTFTSL*VNFSTS Trigger: GGAGGTGGAGAAGTTCACCAAGAGGCTCGTGAAGGT...TCTGAGGCAATCAATTGAATTGAGGTTTTGGGAGAAGAAACTGTTGTTCATAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025651.6 ENSMUST00000116542.9 ENSMUST00000142241.2 ENSMUST00000156291.2 |
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| CDS-3UTR CAA 90 bp | AAGTTCAAATTTCTGCCCACAAAAATCAGCTGGTCAGTACTAAATCTGTTGTCAAAGACGTACACAGGCTaGATGCCATTCTCCATCATG | + |
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Preference number: 5 (lower is better) Translates to: KFKFLPTKISWSVLNLLSKTYTG*MPFSIM Trigger: CATGATGGAGAATGGCATCAAGCCTGTGTACGTCTT...TGACAACAGATTTAGTACTGACCAGCTGATTTTTGTGGGCAGAAATTTGAACTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000025651.6 ENSMUST00000116542.9 ENSMUST00000142241.2 ENSMUST00000156291.2 |
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| CDS CAA 72 bp | AGTACTTCTGGCTCCAGGAAGAGCTGCTGGGCTTCCTaGTGGAGCCAGTTCTCTGGAACGGGGTACTTGCTG | + |
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Preference number: 6 (lower is better) Translates to: STSGSRKSCWAS*WSQFSGTGYLL Trigger: CAGCAAGTACCCCGTTCCAGAGAACTGGCTCCACAAGGAAGCCCAGCAGCTCTTCCTGGAGCCAGAAGTACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025651.6 ENSMUST00000116542.9 ENSMUST00000142241.2 ENSMUST00000156291.2 |
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| CDS TCA 72 bp | GCTGTGGTGGTTTGCCATCAAAGACGTACACAGGCTTaGTGCCATTCTCCATCATGCGGATGGTACGGTAGA | + |
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Preference number: 6 (lower is better) Translates to: AVVVCHQRRTQA*CHSPSCGWYGR Trigger: TCTACCGTACCATCCGCATGATGGAGAATGGCATCAAGCCTGTGTACGTCTTTGATGGCAAACCACCACAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025651.6 ENSMUST00000116542.9 ENSMUST00000142241.2 ENSMUST00000156291.2 |
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