Pregenerated sensors for FEM1C (Mus musculus)
Ensembl gene IDs: ENSMUSG00000033319Ensembl transcript IDs: ENSMUST00000036226.6
Found 136 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CATCAGCACAAGCAGGACGACGCCGGAGACGACGCTGGAGCGGTATaGAAGGCAGTTCACTCTACAAAGGTCTTCCTTTACTGCACGCTA | + |
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Preference number: 1 (lower is better) Translates to: HQHKQDDAGDDAGAV*KAVHSTKVFLYCTL Trigger: TAGCGTGCAGTAAAGGAAGACCTTTGTAGAGTGAACTGCCTTTCATACCGCTCCAGCGTCGTCTCCGGCGTCGTCCTGCTTGTGCTGATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036226.6 |
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| 3UTR CCA 90 bp | CTAGTCACACCATCAGCACAAGCAGGACGACGCCGGAGACGACGCTaGAGCGGTATGAAAGGCAGTTCACTCTACAAAGGTCTTCCTTTA | + |
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Preference number: 1 (lower is better) Translates to: LVTPSAQAGRRRRRR*SGMKGSSLYKGLPL Trigger: TAAAGGAAGACCTTTGTAGAGTGAACTGCCTTTCATACCGCTCCAGCGTCGTCTCCGGCGTCGTCCTGCTTGTGCTGATGGTGTGACTAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036226.6 |
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| 3UTR GCA 90 bp | CGGAACGTAAGGAAACAGTGTTTTGAGTTGAAGTTGACCAACTGCTaGATAGAGAATATGCCAACACACAACAGTCCCAGTTTAAGCCGG | + |
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Preference number: 1 (lower is better) Translates to: RNVRKQCFELKLTNC*IENMPTHNSPSLSR Trigger: CCGGCTTAAACTGGGACTGTTGTGTGTTGGCATATTCTCTATGCAGCAGTTGGTCAACTTCAACTCAAAACACTGTTTCCTTACGTTCCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036226.6 |
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| 3UTR GCA 90 bp | GAACGGAACGTAAGGAAACAGTGTTTTGAGTTGAAGTTGACCAACTaGTGCATAGAGAATATGCCAACACACAACAGTCCCAGTTTAAGC | + |
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Preference number: 1 (lower is better) Translates to: ERNVRKQCFELKLTN*CIENMPTHNSPSLS Trigger: GCTTAAACTGGGACTGTTGTGTGTTGGCATATTCTCTATGCAGCAGTTGGTCAACTTCAACTCAAAACACTGTTTCCTTACGTTCCGTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036226.6 |
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| 3UTR CCA 90 bp | GTAACTGCAAATGGTAAACAAGTCCATAAGGTTTATGACTTAGCATaGACCCAACGGTTCAGGGAACACTGTAGCAGAAATGGTTTGGGA | + |
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Preference number: 1 (lower is better) Translates to: VTANGKQVHKVYDLA*TQRFREHCSRNGLG Trigger: TCCCAAACCATTTCTGCTACAGTGTTCCCTGAACCGTTGGGTCCATGCTAAGTCATAAACCTTATGGACTTGTTTACCATTTGCAGTTAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036226.6 |
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| 3UTR TCA 90 bp | TTTAATCGGTCTCACACATGTCTGATGAAGGCCCTAACAGTTATCTaGGGTTGCACTCCTGAACCAATTCACTCTAAAATAAATTCAATG | + |
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Preference number: 1 (lower is better) Translates to: FNRSHTCLMKALTVI*GCTPEPIHSKINSM Trigger: CATTGAATTTATTTTAGAGTGAATTGGTTCAGGAGTGCAACCTCAGATAACTGTTAGGGCCTTCATCAGACATGTGTGAGACCGATTAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036226.6 |
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| 3UTR TCA 90 bp | TGCACTCCTGAACCAATTCACTCTAAAATAAATTCAATGCTAATTTaGGCTACTAAACAGCTTTTTCAAGAGCTCCAAGGGACATTTCTG | + |
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Preference number: 1 (lower is better) Translates to: CTPEPIHSKINSMLI*ATKQLFQELQGTFL Trigger: CAGAAATGTCCCTTGGAGCTCTTGAAAAAGCTGTTTAGTAGCTCAAATTAGCATTGAATTTATTTTAGAGTGAATTGGTTCAGGAGTGCA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036226.6 |
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| 3UTR CAA 90 bp | TGGACTCCGGAACGGAACGTAAGGAAACAGTGTTTTGAGTTGAAGTaGACCAACTGCTGCATAGAGAATATGCCAACACACAACAGTCCC | + |
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Preference number: 2 (lower is better) Translates to: WTPERNVRKQCFELK*TNCCIENMPTHNSP Trigger: GGGACTGTTGTGTGTTGGCATATTCTCTATGCAGCAGTTGGTCAACTTCAACTCAAAACACTGTTTCCTTACGTTCCGTTCCGGAGTCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036226.6 |
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| 3UTR-3UTR TCA 90 bp | GCTTTTTCAAGAGCTCCAAGGGACATTTCTGGAGAAGGCAAACAGAAGAGGGAGAGCCAATGGGAGCAATaGTATCAAGCTAATGGATGC | + |
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Preference number: 2 (lower is better) Translates to: AFSRAPRDISGEGKQKRESQWEQ*YQANGC Trigger: GCATCCATTAGCTTGATATCATTGCTCCCATTGGCT...CTCCCTCTTCTGTTTGCCTTCTCCAGAAATGTCCCTTGGAGCTCTTGAAAAAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036226.6 |
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| 3UTR CAA 90 bp | GTGAAATGGACTCCGGAACGGAACGTAAGGAAACAGTGTTTTGAGTaGAAGTTGACCAACTGCTGCATAGAGAATATGCCAACACACAAC | + |
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Preference number: 2 (lower is better) Translates to: VKWTPERNVRKQCFE*KLTNCCIENMPTHN Trigger: GTTGTGTGTTGGCATATTCTCTATGCAGCAGTTGGTCAACTTCAACTCAAAACACTGTTTCCTTACGTTCCGTTCCGGAGTCCATTTCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036226.6 |
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| 3UTR-3UTR TCA 90 bp | CTAAACAGCTTTTTCAAGAGCTCCAAGGGACATTTCTGGAGAAGGCAAACAGAATCTGCAGTTCATGACTaGGAGCTCAATGTGAGTCGT | + |
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Preference number: 2 (lower is better) Translates to: LNSFFKSSKGHFWRRQTESAVHD*ELNVSR Trigger: ACGACTCACATTGAGCTCTCAGTCATGAACTGCAGA...TTCTGTTTGCCTTCTCCAGAAATGTCCCTTGGAGCTCTTGAAAAAGCTGTTTAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036226.6 |
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| 3UTR-3UTR TCA 90 bp | GAGCTGCATCCTGACTGCAATACAATGCTGCAGTTTTCAAGACTAAGTAAGAACAAAGAACACTGTTACTaGCCTCTGGTCCTATGGCAG | + |
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Preference number: 2 (lower is better) Translates to: ELHPDCNTMLQFSRLSKNKEHCY*PLVLWQ Trigger: CTGCCATAGGACCAGAGGTCAGTAACAGTGTTCTTT...GTTCTTACTTAGTCTTGAAAACTGCAGCATTGTATTGCAGTCAGGATGCAGCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036226.6 |
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| 3UTR-3UTR GCA 90 bp | GCTTTTTCAAGAGCTCCAAGGGACATTTCTGGAGAAGGCAAACAGAAGAGGGAGTTGAAGTTGACCAACTaGTGCATAGAGAATATGCCA | + |
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Preference number: 2 (lower is better) Translates to: AFSRAPRDISGEGKQKRELKLTN*CIENMP Trigger: TGGCATATTCTCTATGCAGCAGTTGGTCAACTTCAA...CTCCCTCTTCTGTTTGCCTTCTCCAGAAATGTCCCTTGGAGCTCTTGAAAAAGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036226.6 |
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| 3UTR-3UTR TCA 90 bp | CAGTTTAAGCCGGTGCATAGAGAAGATAAAGCACTTATGGTAACTGCAAATGGTGAAACAGGCAAAACTTaGAGACAGAAGTGGGAGCCA | + |
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Preference number: 2 (lower is better) Translates to: QFKPVHREDKALMVTANGETGKT*RQKWEP Trigger: TGGCTCCCACTTCTGTCTTCAAGTTTTGCCTGTTTC...ACCATTTGCAGTTACCATAAGTGCTTTATCTTCTCTATGCACCGGCTTAAACTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036226.6 |
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| 3UTR-3UTR TCA 90 bp | GCTTTTTCAAGAGCTCCAAGGGACATTTCTGGAGAAGGCAAACAGAAGAGGGAGAAATTTTCTGTGGACTaGAGAAAGAAACCTCAGATG | + |
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Preference number: 2 (lower is better) Translates to: AFSRAPRDISGEGKQKREKFSVD*RKKPQM Trigger: CATCTGAGGTTTCTTTCTTCAGTCCACAGAAAATTT...CTCCCTCTTCTGTTTGCCTTCTCCAGAAATGTCCCTTGGAGCTCTTGAAAAAGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036226.6 |
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| 3UTR-3UTR GCA 90 bp | CTAAACAGCTTTTTCAAGAGCTCCAAGGGACATTTCTGGAGAAGGCAAACAGAACCCAGTTTAAGCCGGTaGATAGAGAAGATAAAGCAC | + |
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Preference number: 2 (lower is better) Translates to: LNSFFKSSKGHFWRRQTEPSLSR*IEKIKH Trigger: GTGCTTTATCTTCTCTATGCACCGGCTTAAACTGGG...TTCTGTTTGCCTTCTCCAGAAATGTCCCTTGGAGCTCTTGAAAAAGCTGTTTAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036226.6 |
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| 3UTR-3UTR TCA 90 bp | TCTGGTCCTATGGCAGTACACCGCATACTAAAATACCGTAATTATCTTAGATGCCCAACCCTGCACATTTaGTGCTTACAATGCTTTAGC | + |
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Preference number: 2 (lower is better) Translates to: SGPMAVHRILKYRNYLRCPTLHI*CLQCFS Trigger: GCTAAAGCATTGTAAGCATCAAATGTGCAGGGTTGG...GCATCTAAGATAATTACGGTATTTTAGTATGCGGTGTACTGCCATAGGACCAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036226.6 |
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| 3UTR-3UTR GCA 90 bp | CCTATGGCAGTACACCGCATACTAAAATACCGTAATTATCTTAGATGCCTAGGGGTGTTATCACAACAGTaGTCATTACAACTGTTCCCA | + |
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Preference number: 2 (lower is better) Translates to: PMAVHRILKYRNYLRCLGVLSQQ*SLQLFP Trigger: TGGGAACAGTTGTAATGAGCACTGTTGTGATAACAC...CCCTAGGCATCTAAGATAATTACGGTATTTTAGTATGCGGTGTACTGCCATAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036226.6 |
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| 3UTR-3UTR GCA 90 bp | CCTATGGCAGTACACCGCATACTAAAATACCGTAATTATCTTAGATGCCTAGGGAAGTTGACCAACTGCTaGATAGAGAATATGCCAACA | + |
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Preference number: 2 (lower is better) Translates to: PMAVHRILKYRNYLRCLGKLTNC*IENMPT Trigger: TGTTGGCATATTCTCTATGCAGCAGTTGGTCAACTT...CCCTAGGCATCTAAGATAATTACGGTATTTTAGTATGCGGTGTACTGCCATAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036226.6 |
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| 3UTR-3UTR CCA 90 bp | TCTGGTCCTATGGCAGTACACCGCATACTAAAATACCGTAATTATCTTAGATGCCAAGCTAATGGATGCTaGTGTTATCACAACAGTGCT | + |
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Preference number: 2 (lower is better) Translates to: SGPMAVHRILKYRNYLRCQANGC*CYHNSA Trigger: AGCACTGTTGTGATAACACCAGCATCCATTAGCTTG...GCATCTAAGATAATTACGGTATTTTAGTATGCGGTGTACTGCCATAGGACCAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036226.6 |
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| 3UTR-3UTR GCA 90 bp | TCTGGTCCTATGGCAGTACACCGCATACTAAAATACCGTAATTATCTTAGATGCTATCAAGCTAATGGATaGTGGTGTTATCACAACAGT | + |
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Preference number: 2 (lower is better) Translates to: SGPMAVHRILKYRNYLRCYQANG*WCYHNS Trigger: ACTGTTGTGATAACACCAGCATCCATTAGCTTGATA...GCATCTAAGATAATTACGGTATTTTAGTATGCGGTGTACTGCCATAGGACCAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036226.6 |
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| 3UTR-3UTR CCA 90 bp | CCTATGGCAGTACACCGCATACTAAAATACCGTAATTATCTTAGATGCCTAGGGATTTATATTAAACACTaGGAAACCAACCCTGCACAT | + |
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Preference number: 2 (lower is better) Translates to: PMAVHRILKYRNYLRCLGIYIKH*ETNPAH Trigger: ATGTGCAGGGTTGGTTTCCCAGTGTTTAATATAAAT...CCCTAGGCATCTAAGATAATTACGGTATTTTAGTATGCGGTGTACTGCCATAGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036226.6 |
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| 3UTR CCA 72 bp | CCATCAGCACAAGCAGGACGACGCCGGAGACGACGCTaGAGCGGTATGAAAGGCAGTTCACTCTACAAAGGT | + |
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Preference number: 3 (lower is better) Translates to: PSAQAGRRRRRR*SGMKGSSLYKG Trigger: ACCTTTGTAGAGTGAACTGCCTTTCATACCGCTCCAGCGTCGTCTCCGGCGTCGTCCTGCTTGTGCTGATGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036226.6 |
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| 3UTR TCA 72 bp | GGGCTACGAAAATTCCAGTGCATGTGTAAAACAGTGTaGAGATGTGCCCTGCTCTATGAGCGGGTAAGCCAG | + |
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Preference number: 3 (lower is better) Translates to: GLRKFQCMCKTV*RCALLYERVSQ Trigger: CTGGCTTACCCGCTCATAGAGCAGGGCACATCTTCACACTGTTTTACACATGCACTGGAATTTTCGTAGCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036226.6 |
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| 3UTR-3UTR CAA 90 bp | GAGCTGCATCCTGACTGCAATACAATGCTGCAGTTTTCAAGACTAAGTAAGAACATGCCTAGGGCTGGCTaGGCAAGCATCATGCCACTG | + |
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Preference number: 3 (lower is better) Translates to: ELHPDCNTMLQFSRLSKNMPRAG*ASIMPL Trigger: CAGTGGCATGATGCTTGCCAAGCCAGCCCTAGGCAT...GTTCTTACTTAGTCTTGAAAACTGCAGCATTGTATTGCAGTCAGGATGCAGCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036226.6 |
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| 3UTR TCA 72 bp | CTGGAGAAGGCAAACAGAAGAGGGAGAGCTGCATCCTaGCTGCAATACAATGCTGCAGTTTTCAAGACTAAG | + |
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Preference number: 3 (lower is better) Translates to: LEKANRRGRAAS*LQYNAAVFKTK Trigger: CTTAGTCTTGAAAACTGCAGCATTGTATTGCAGTCAGGATGCAGCTCTCCCTCTTCTGTTTGCCTTCTCCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036226.6 |
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| 3UTR GCA 72 bp | CCTGCTGGGAACTACTTGCAGAGATTAACACACCTGTaGATTCAAACTGAGGGGATGATTTGCTGGGCAATT | + |
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Preference number: 3 (lower is better) Translates to: PAGNYLQRLTHL*IQTEGMICWAI Trigger: AATTGCCCAGCAAATCATCCCCTCAGTTTGAATGCACAGGTGTGTTAATCTCTGCAAGTAGTTCCCAGCAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036226.6 |
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| 3UTR CCA 72 bp | CTAAACAGCTTTTTCAAGAGCTCCAAGGGACATTTCTaGAGAAGGCAAACAGAAGAGGGAGAGCTGCATCCT | + |
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Preference number: 3 (lower is better) Translates to: LNSFFKSSKGHF*RRQTEEGELHP Trigger: AGGATGCAGCTCTCCCTCTTCTGTTTGCCTTCTCCAGAAATGTCCCTTGGAGCTCTTGAAAAAGCTGTTTAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036226.6 |
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| 3UTR-3UTR CAA 90 bp | GCTTTTTCAAGAGCTCCAAGGGACATTTCTGGAGAAGGCAAACAGAAGAGGGAGTGTTTTGAGTTGAAGTaGACCAACTGCTGCATAGAG | + |
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Preference number: 3 (lower is better) Translates to: AFSRAPRDISGEGKQKRECFELK*TNCCIE Trigger: CTCTATGCAGCAGTTGGTCAACTTCAACTCAAAACA...CTCCCTCTTCTGTTTGCCTTCTCCAGAAATGTCCCTTGGAGCTCTTGAAAAAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036226.6 |
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| 3UTR TCA 72 bp | ATGGACTCCGGAACGGAACGTAAGGAAACAGTGTTTTaGGTTGAAGTTGACCAACTGCTGCATAGAGAATAT | + |
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Preference number: 3 (lower is better) Translates to: MDSGTERKETVF*VEVDQLLHREY Trigger: ATATTCTCTATGCAGCAGTTGGTCAACTTCAACTCAAAACACTGTTTCCTTACGTTCCGTTCCGGAGTCCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036226.6 |
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| 3UTR GCA 72 bp | AGGAAACAGTGTTTTGAGTTGAAGTTGACCAACTGCTaGATAGAGAATATGCCAACACACAACAGTCCCAGT | + |
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Preference number: 3 (lower is better) Translates to: RKQCFELKLTNC*IENMPTHNSPS Trigger: ACTGGGACTGTTGTGTGTTGGCATATTCTCTATGCAGCAGTTGGTCAACTTCAACTCAAAACACTGTTTCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036226.6 |
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| 3UTR GCA 72 bp | GTAAGGAAACAGTGTTTTGAGTTGAAGTTGACCAACTaGTGCATAGAGAATATGCCAACACACAACAGTCCC | + |
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Preference number: 3 (lower is better) Translates to: VRKQCFELKLTN*CIENMPTHNSP Trigger: GGGACTGTTGTGTGTTGGCATATTCTCTATGCAGCAGTTGGTCAACTTCAACTCAAAACACTGTTTCCTTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036226.6 |
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| 3UTR-3UTR CAA 90 bp | CTAAACAGCTTTTTCAAGAGCTCCAAGGGACATTTCTGGAGAAGGCAAACAGAAAAACAGTGTTTTGAGTaGAAGTTGACCAACTGCTGC | + |
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Preference number: 3 (lower is better) Translates to: LNSFFKSSKGHFWRRQTEKQCFE*KLTNCC Trigger: GCAGCAGTTGGTCAACTTCAACTCAAAACACTGTTT...TTCTGTTTGCCTTCTCCAGAAATGTCCCTTGGAGCTCTTGAAAAAGCTGTTTAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000036226.6 |
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| 3UTR TCA 72 bp | TCTCACACATGTCTGATGAAGGCCCTAACAGTTATCTaGGGTTGCACTCCTGAACCAATTCACTCTAAAATA | + |
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Preference number: 3 (lower is better) Translates to: SHTCLMKALTVI*GCTPEPIHSKI Trigger: TATTTTAGAGTGAATTGGTTCAGGAGTGCAACCTCAGATAACTGTTAGGGCCTTCATCAGACATGTGTGAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036226.6 |
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| 3UTR TCA 72 bp | CTACTTGCAGAGATTAACACACCTGTGCATTCAAACTaGGGGGATGATTTGCTGGGCAATTTGAGTTTTAAA | + |
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Preference number: 3 (lower is better) Translates to: LLAEINTPVHSN*GDDLLGNLSFK Trigger: TTTAAAACTCAAATTGCCCAGCAAATCATCCCCTCAGTTTGAATGCACAGGTGTGTTAATCTCTGCAAGTAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036226.6 |
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| 3UTR GCA 72 bp | ATTCAGAAGTATTTCTGGAGAAACAATGTTGAGACCTaGACATTAATTCCAGCCAATACTACCATGTATATT | + |
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Preference number: 3 (lower is better) Translates to: IQKYFWRNNVET*TLIPANTTMYI Trigger: AATATACATGGTAGTATTGGCTGGAATTAATGTGCAGGTCTCAACATTGTTTCTCCAGAAATACTTCTGAAT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036226.6 |
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| CDS-3UTR TCA 90 bp | GCTTTTTCAAGAGCTCCAAGGGACATTTCTGGAGAAGGCAAACAGAAGAGGGAGTTGCCAGCAACTTGGTaGGGAGCCGGAGTTTGCCAT | + |
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Preference number: 4 (lower is better) Translates to: AFSRAPRDISGEGKQKRELPATW*GAGVCH Trigger: ATGGCAAACTCCGGCTCCTCACCAAGTTGCTGGCAA...CTCCCTCTTCTGTTTGCCTTCTCCAGAAATGTCCCTTGGAGCTCTTGAAAAAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036226.6 |
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| CDS-3UTR CCA 90 bp | GCTTTTTCAAGAGCTCCAAGGGACATTTCTGGAGAAGGCAAACAGAAGAGGGAGAGCCCCCGACTTCTATaGAAGCACTGCACTGCTCTA | + |
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Preference number: 4 (lower is better) Translates to: AFSRAPRDISGEGKQKRESPRLL*KHCTAL Trigger: TAGAGCAGTGCAGTGCTTCCATAGAAGTCGGGGGCT...CTCCCTCTTCTGTTTGCCTTCTCCAGAAATGTCCCTTGGAGCTCTTGAAAAAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000036226.6 |
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| CDS-3UTR TCA 90 bp | GAGCTGCATCCTGACTGCAATACAATGCTGCAGTTTTCAAGACTAAGTAAGAACCATCGCGCGCTGCGTTaGACACCGCTGTCTTTAGAT | + |
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Preference number: 4 (lower is better) Translates to: ELHPDCNTMLQFSRLSKNHRALR*TPLSLD Trigger: ATCTAAAGACAGCGGTGTTCAACGCAGCGCGCGATG...GTTCTTACTTAGTCTTGAAAACTGCAGCATTGTATTGCAGTCAGGATGCAGCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036226.6 |
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| CDS-3UTR GCA 90 bp | GCTTTTTCAAGAGCTCCAAGGGACATTTCTGGAGAAGGCAAACAGAAGAGGGAGTTGTCCACAGCCAGATaGAGAGGGCTGAAGTTATTC | + |
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Preference number: 4 (lower is better) Translates to: AFSRAPRDISGEGKQKRELSTAR*RGLKLF Trigger: GAATAACTTCAGCCCTCTGCATCTGGCTGTGGACAA...CTCCCTCTTCTGTTTGCCTTCTCCAGAAATGTCCCTTGGAGCTCTTGAAAAAGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036226.6 |
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| CDS-3UTR TCA 90 bp | CTAAACAGCTTTTTCAAGAGCTCCAAGGGACATTTCTGGAGAAGGCAAACAGAAGGGTCAGCTGGACACTaGGTTTGTTTGATAGCTCGC | + |
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Preference number: 4 (lower is better) Translates to: LNSFFKSSKGHFWRRQTEGSAGH*VCLIAR Trigger: GCGAGCTATCAAACAAACTCAGTGTCCAGCTGACCC...TTCTGTTTGCCTTCTCCAGAAATGTCCCTTGGAGCTCTTGAAAAAGCTGTTTAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036226.6 |
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| CDS-3UTR CCA 90 bp | GCTTTTTCAAGAGCTCCAAGGGACATTTCTGGAGAAGGCAAACAGAAGAGGGAGTCTGTCTTGCTTGTCTaGGCATGGTGCGTAAGAAAA | + |
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Preference number: 4 (lower is better) Translates to: AFSRAPRDISGEGKQKRESVLLV*AWCVRK Trigger: TTTTCTTACGCACCATGCCCAGACAAGCAAGACAGA...CTCCCTCTTCTGTTTGCCTTCTCCAGAAATGTCCCTTGGAGCTCTTGAAAAAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036226.6 |
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| CDS-3UTR TCA 90 bp | CCTATGGCAGTACACCGCATACTAAAATACCGTAATTATCTTAGATGCCTAGGGCCCTGTCCTGTAGCATaGAGGAGAACAGTTCTGCAA | + |
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Preference number: 4 (lower is better) Translates to: PMAVHRILKYRNYLRCLGPCPVA*RRTVLQ Trigger: TTGCAGAACTGTTCTCCTTCATGCTACAGGACAGGG...CCCTAGGCATCTAAGATAATTACGGTATTTTAGTATGCGGTGTACTGCCATAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036226.6 |
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| CDS-3UTR GCA 90 bp | GCTTTTTCAAGAGCTCCAAGGGACATTTCTGGAGAAGGCAAACAGAAGAGGGAGCAAACTTCCAGACTCTaGACAATCATGCAATGCAGT | + |
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Preference number: 4 (lower is better) Translates to: AFSRAPRDISGEGKQKREQTSRL*TIMQCS Trigger: ACTGCATTGCATGATTGTGCAGAGTCTGGAAGTTTG...CTCCCTCTTCTGTTTGCCTTCTCCAGAAATGTCCCTTGGAGCTCTTGAAAAAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036226.6 |
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| CDS-3UTR TCA 90 bp | CAGTTTAAGCCGGTGCATAGAGAAGATAAAGCACTTATGGTAACTGCAAATGGTACCAGTCACACTTGCTaGGAGAAGAGGAGTCATTCC | + |
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Preference number: 4 (lower is better) Translates to: QFKPVHREDKALMVTANGTSHTC*EKRSHS Trigger: GGAATGACTCCTCTTCTCTCAGCAAGTGTGACTGGT...ACCATTTGCAGTTACCATAAGTGCTTTATCTTCTCTATGCACCGGCTTAAACTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036226.6 |
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| CDS-3UTR GCA 90 bp | CTAAACAGCTTTTTCAAGAGCTCCAAGGGACATTTCTGGAGAAGGCAAACAGAAATCATCAAGCAAGTATaGCCATGGCGGTTGGACACT | + |
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Preference number: 4 (lower is better) Translates to: LNSFFKSSKGHFWRRQTEIIKQV*PWRLDT Trigger: AGTGTCCAACCGCCATGGGCATACTTGCTTGATGAT...TTCTGTTTGCCTTCTCCAGAAATGTCCCTTGGAGCTCTTGAAAAAGCTGTTTAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036226.6 |
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| CDS-3UTR CCA 90 bp | TCTGGTCCTATGGCAGTACACCGCATACTAAAATACCGTAATTATCTTAGATGCTATGCCCATGGCGGTTaGACACTTCCAAATCGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: SGPMAVHRILKYRNYLRCYAHGG*TLPNRL Trigger: AAGCCGATTTGGAAGTGTCCAACCGCCATGGGCATA...GCATCTAAGATAATTACGGTATTTTAGTATGCGGTGTACTGCCATAGGACCAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036226.6 |
||
| CDS-3UTR CCA 90 bp | CCTATGGCAGTACACCGCATACTAAAATACCGTAATTATCTTAGATGCCTAGGGAAGCAAGTATGCCCATaGCGGTTGGACACTTCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: PMAVHRILKYRNYLRCLGKQVCP*RLDTSK Trigger: TTTGGAAGTGTCCAACCGCCATGGGCATACTTGCTT...CCCTAGGCATCTAAGATAATTACGGTATTTTAGTATGCGGTGTACTGCCATAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036226.6 |
||
| 3UTR CAA 72 bp | ACTCCGGAACGGAACGTAAGGAAACAGTGTTTTGAGTaGAAGTTGACCAACTGCTGCATAGAGAATATGCCA | + |
|
Preference number: 4 (lower is better) Translates to: TPERNVRKQCFE*KLTNCCIENMP Trigger: TGGCATATTCTCTATGCAGCAGTTGGTCAACTTCAACTCAAAACACTGTTTCCTTACGTTCCGTTCCGGAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036226.6 |
||
| CDS-3UTR TCA 90 bp | TCTGGTCCTATGGCAGTACACCGCATACTAAAATACCGTAATTATCTTAGATGCCCAGATGCAGAGGGCTaGAGTTATTCTTTCCTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: SGPMAVHRILKYRNYLRCPDAEG*SYSFLL Trigger: CAAGAGGAAAGAATAACTTCAGCCCTCTGCATCTGG...GCATCTAAGATAATTACGGTATTTTAGTATGCGGTGTACTGCCATAGGACCAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036226.6 |
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| CDS-3UTR TCA 90 bp | CAGTTTAAGCCGGTGCATAGAGAAGATAAAGCACTTATGGTAACTGCAAATGGTTGTCATCAGAGTCTCTaGCATTCACATCAGCACCAC | + |
|
Preference number: 4 (lower is better) Translates to: QFKPVHREDKALMVTANGCHQSL*HSHQHH Trigger: GTGGTGCTGATGTGAATGTCAGAGACTCTGATGACA...ACCATTTGCAGTTACCATAAGTGCTTTATCTTCTCTATGCACCGGCTTAAACTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036226.6 |
||
| CDS-3UTR TCA 90 bp | CCTATGGCAGTACACCGCATACTAAAATACCGTAATTATCTTAGATGCCTAGGGTTCTATGATTCACGATaGCACGAGCAGCAAGACACT | + |
|
Preference number: 4 (lower is better) Translates to: PMAVHRILKYRNYLRCLGFYDSR*HEQQDT Trigger: AGTGTCTTGCTGCTCGTGTCATCGTGAATCATAGAA...CCCTAGGCATCTAAGATAATTACGGTATTTTAGTATGCGGTGTACTGCCATAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036226.6 |
||
| CDS-3UTR GCA 90 bp | CCTATGGCAGTACACCGCATACTAAAATACCGTAATTATCTTAGATGCCTAGGGATGGAAGCACTGCACTaGTCTAGAAGGAATTCTACC | + |
|
Preference number: 4 (lower is better) Translates to: PMAVHRILKYRNYLRCLGMEALH*SRRNST Trigger: GGTAGAATTCCTTCTAGAGCAGTGCAGTGCTTCCAT...CCCTAGGCATCTAAGATAATTACGGTATTTTAGTATGCGGTGTACTGCCATAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036226.6 |
||
| CDS-3UTR GCA 90 bp | CCTATGGCAGTACACCGCATACTAAAATACCGTAATTATCTTAGATGCCTAGGGCAAAAGACAGTAAGCTaGTGGCAGTCATTGGGCTTA | + |
|
Preference number: 4 (lower is better) Translates to: PMAVHRILKYRNYLRCLGQKTVS*WQSLGL Trigger: TAAGCCCAATGACTGCCAGCAGCTTACTGTCTTTTG...CCCTAGGCATCTAAGATAATTACGGTATTTTAGTATGCGGTGTACTGCCATAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036226.6 |
||
| CDS-3UTR CCA 90 bp | TCTGGTCCTATGGCAGTACACCGCATACTAAAATACCGTAATTATCTTAGATGCTTCACTATTTCCAAATaGCCATCGAAGCACGCGGCT | + |
|
Preference number: 4 (lower is better) Translates to: SGPMAVHRILKYRNYLRCFTISK*PSKHAA Trigger: AGCCGCGTGCTTCGATGGCCATTTGGAAATAGTGAA...GCATCTAAGATAATTACGGTATTTTAGTATGCGGTGTACTGCCATAGGACCAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036226.6 |
||
| CDS-3UTR CCA 90 bp | CTAAACAGCTTTTTCAAGAGCTCCAAGGGACATTTCTGGAGAAGGCAAACAGAATTGCTTGTCTGGGCATaGTGCGTAAGAAAATCCACA | + |
|
Preference number: 4 (lower is better) Translates to: LNSFFKSSKGHFWRRQTELLVWA*CVRKST Trigger: TGTGGATTTTCTTACGCACCATGCCCAGACAAGCAA...TTCTGTTTGCCTTCTCCAGAAATGTCCCTTGGAGCTCTTGAAAAAGCTGTTTAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036226.6 |
||
| CDS-3UTR CCA 90 bp | CCTATGGCAGTACACCGCATACTAAAATACCGTAATTATCTTAGATGCCTAGGGGAGATTCATGATGTCTaGATGGTTATTCAGAGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: PMAVHRILKYRNYLRCLGEIHDV*MVIQSR Trigger: GCGGCTCTGAATAACCATCCAGACATCATGAATCTC...CCCTAGGCATCTAAGATAATTACGGTATTTTAGTATGCGGTGTACTGCCATAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036226.6 |
||
| 3UTR CAA 72 bp | GAACGGAACGTAAGGAAACAGTGTTTTGAGTTGAAGTaGACCAACTGCTGCATAGAGAATATGCCAACACAC | + |
|
Preference number: 4 (lower is better) Translates to: ERNVRKQCFELK*TNCCIENMPTH Trigger: GTGTGTTGGCATATTCTCTATGCAGCAGTTGGTCAACTTCAACTCAAAACACTGTTTCCTTACGTTCCGTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036226.6 |
||
| CDS-3UTR TCA 90 bp | CAGTTTAAGCCGGTGCATAGAGAAGATAAAGCACTTATGGTAACTGCAAATGGTTCCACAATATTAGTGTaGCCAGTCACACTTGCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: QFKPVHREDKALMVTANGSTILV*PVTLAE Trigger: CTCAGCAAGTGTGACTGGTCACACTAATATTGTGGA...ACCATTTGCAGTTACCATAAGTGCTTTATCTTCTCTATGCACCGGCTTAAACTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036226.6 |
||
| CDS-3UTR GCA 90 bp | CCTATGGCAGTACACCGCATACTAAAATACCGTAATTATCTTAGATGCCTAGGGGACTCTGCACAATCATaGAATGCAGTGTTGCCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: PMAVHRILKYRNYLRCLGDSAQS*NAVLPL Trigger: TAAAGGCAACACTGCATTGCATGATTGTGCAGAGTC...CCCTAGGCATCTAAGATAATTACGGTATTTTAGTATGCGGTGTACTGCCATAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036226.6 |
||
| CDS-3UTR GCA 90 bp | GAGCTGCATCCTGACTGCAATACAATGCTGCAGTTTTCAAGACTAAGTAAGAACCTTGTCTGGGCATGGTaGGTAAGAAAATCCACAATA | + |
|
Preference number: 4 (lower is better) Translates to: ELHPDCNTMLQFSRLSKNLVWAW*VRKSTI Trigger: TATTGTGGATTTTCTTACGCACCATGCCCAGACAAG...GTTCTTACTTAGTCTTGAAAACTGCAGCATTGTATTGCAGTCAGGATGCAGCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036226.6 |
||
| CDS-3UTR GCA 90 bp | CTAAACAGCTTTTTCAAGAGCTCCAAGGGACATTTCTGGAGAAGGCAAACAGAAGGGTCCAAATTGCTCTaGTGCATATCCAAAGCATAT | + |
|
Preference number: 4 (lower is better) Translates to: LNSFFKSSKGHFWRRQTEGSKLL*CISKAY Trigger: ATATGCTTTGGATATGCAGCAGAGCAATTTGGACCC...TTCTGTTTGCCTTCTCCAGAAATGTCCCTTGGAGCTCTTGAAAAAGCTGTTTAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036226.6 |
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| CDS-3UTR GCA 90 bp | TCTGGTCCTATGGCAGTACACCGCATACTAAAATACCGTAATTATCTTAGATGCAGAGCCTTATTTAACTaGAATGGGTCAGCTGGACAC | + |
|
Preference number: 4 (lower is better) Translates to: SGPMAVHRILKYRNYLRCRALFN*NGSAGH Trigger: GTGTCCAGCTGACCCATTGCAGTTAAATAAGGCTCT...GCATCTAAGATAATTACGGTATTTTAGTATGCGGTGTACTGCCATAGGACCAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036226.6 |
||
| CDS-3UTR CCA 90 bp | CAGTTTAAGCCGGTGCATAGAGAAGATAAAGCACTTATGGTAACTGCAAATGGTAAGACAGTAAGCTGCTaGCAGTCATTGGGCTTAAAG | + |
|
Preference number: 4 (lower is better) Translates to: QFKPVHREDKALMVTANGKTVSC*QSLGLK Trigger: CTTTAAGCCCAATGACTGCCAGCAGCTTACTGTCTT...ACCATTTGCAGTTACCATAAGTGCTTTATCTTCTCTATGCACCGGCTTAAACTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036226.6 |
||
| CDS-3UTR CCA 90 bp | CAGTTTAAGCCGGTGCATAGAGAAGATAAAGCACTTATGGTAACTGCAAATGGTCTGCAATGGGTCAGCTaGACACTGAGTTTGTTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: QFKPVHREDKALMVTANGLQWVS*TLSLFD Trigger: ATCAAACAAACTCAGTGTCCAGCTGACCCATTGCAG...ACCATTTGCAGTTACCATAAGTGCTTTATCTTCTCTATGCACCGGCTTAAACTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036226.6 |
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| CDS-3UTR CCA 90 bp | GAGCTGCATCCTGACTGCAATACAATGCTGCAGTTTTCAAGACTAAGTAAGAACTTCATGATGTCTGGATaGTTATTCAGAGCCGCGATA | + |
|
Preference number: 4 (lower is better) Translates to: ELHPDCNTMLQFSRLSKNFMMSG*LFRAAI Trigger: TATCGCGGCTCTGAATAACCATCCAGACATCATGAA...GTTCTTACTTAGTCTTGAAAACTGCAGCATTGTATTGCAGTCAGGATGCAGCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036226.6 |
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| CDS-3UTR TCA 90 bp | CAGTTTAAGCCGGTGCATAGAGAAGATAAAGCACTTATGGTAACTGCAAATGGTTTGACAGATGCTCCGTaGTTTAACAAAGACTGGACA | + |
|
Preference number: 4 (lower is better) Translates to: QFKPVHREDKALMVTANGLTDAP*FNKDWT Trigger: TGTCCAGTCTTTGTTAAATCACGGAGCATCTGTCAA...ACCATTTGCAGTTACCATAAGTGCTTTATCTTCTCTATGCACCGGCTTAAACTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036226.6 |
||
| CDS-3UTR TCA 90 bp | CCTATGGCAGTACACCGCATACTAAAATACCGTAATTATCTTAGATGCCTAGGGCACTGCAATGTGGTATaGTTTATGGGCTGTATCAAA | + |
|
Preference number: 4 (lower is better) Translates to: PMAVHRILKYRNYLRCLGHCNVV*FMGCIK Trigger: TTTGATACAGCCCATAAATCATACCACATTGCAGTG...CCCTAGGCATCTAAGATAATTACGGTATTTTAGTATGCGGTGTACTGCCATAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036226.6 |
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| CDS-3UTR GCA 90 bp | GAGCTGCATCCTGACTGCAATACAATGCTGCAGTTTTCAAGACTAAGTAAGAACCTAATTAACAGCGCTTaGATTCTCATCTCATCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: ELHPDCNTMLQFSRLSKNLINSA*ILISSG Trigger: TCCTGATGAGATGAGAATGCAAGCGCTGTTAATTAG...GTTCTTACTTAGTCTTGAAAACTGCAGCATTGTATTGCAGTCAGGATGCAGCTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036226.6 |
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| CDS-3UTR GCA 90 bp | GAGCTGCATCCTGACTGCAATACAATGCTGCAGTTTTCAAGACTAAGTAAGAACTTAAAGGGTCCAAATTaGTCTGCTGCATATCCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: ELHPDCNTMLQFSRLSKNLKGPN*SAAYPK Trigger: CTTTGGATATGCAGCAGAGCAATTTGGACCCTTTAA...GTTCTTACTTAGTCTTGAAAACTGCAGCATTGTATTGCAGTCAGGATGCAGCTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036226.6 |
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| CDS-3UTR CCA 90 bp | CTAAACAGCTTTTTCAAGAGCTCCAAGGGACATTTCTGGAGAAGGCAAACAGAACAAGACACTGCAATGTaGTATGATTTATGGGCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: LNSFFKSSKGHFWRRQTEQDTAM*YDLWAV Trigger: TACAGCCCATAAATCATACCACATTGCAGTGTCTTG...TTCTGTTTGCCTTCTCCAGAAATGTCCCTTGGAGCTCTTGAAAAAGCTGTTTAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036226.6 |
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| CDS-3UTR TCA 90 bp | CAGTTTAAGCCGGTGCATAGAGAAGATAAAGCACTTATGGTAACTGCAAATGGTTTAAAGTCGTGTTGTTaGCAGATGCTCCGTGATTTA | + |
|
Preference number: 4 (lower is better) Translates to: QFKPVHREDKALMVTANGLKSCC*QMLRDL Trigger: TAAATCACGGAGCATCTGTCAACAACACGACTTTAA...ACCATTTGCAGTTACCATAAGTGCTTTATCTTCTCTATGCACCGGCTTAAACTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036226.6 |
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| CDS-3UTR TCA 90 bp | CCTATGGCAGTACACCGCATACTAAAATACCGTAATTATCTTAGATGCCTAGGGGTGTCCTTTATAGCATaGAATCATCAAGCAAGTATG | + |
|
Preference number: 4 (lower is better) Translates to: PMAVHRILKYRNYLRCLGVSFIA*NHQASM Trigger: CATACTTGCTTGATGATTTCATGCTATAAAGGACAC...CCCTAGGCATCTAAGATAATTACGGTATTTTAGTATGCGGTGTACTGCCATAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036226.6 |
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| CDS-3UTR TCA 90 bp | GAGCTGCATCCTGACTGCAATACAATGCTGCAGTTTTCAAGACTAAGTAAGAACGTCTGCTTTTTGAAATaGTCCTGTTCTACAGTACAA | + |
|
Preference number: 4 (lower is better) Translates to: ELHPDCNTMLQFSRLSKNVCFLK*SCSTVQ Trigger: TTGTACTGTAGAACAGGATCATTTCAAAAAGCAGAC...GTTCTTACTTAGTCTTGAAAACTGCAGCATTGTATTGCAGTCAGGATGCAGCTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036226.6 |
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| CDS-3UTR GCA 90 bp | TCTGGTCCTATGGCAGTACACCGCATACTAAAATACCGTAATTATCTTAGATGCTGCACAATCATGCAATaGAGTGTTGCCTTTAACACT | + |
|
Preference number: 4 (lower is better) Translates to: SGPMAVHRILKYRNYLRCCTIMQ*SVAFNT Trigger: AGTGTTAAAGGCAACACTGCATTGCATGATTGTGCA...GCATCTAAGATAATTACGGTATTTTAGTATGCGGTGTACTGCCATAGGACCAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036226.6 |
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| CDS-3UTR GCA 90 bp | CCTATGGCAGTACACCGCATACTAAAATACCGTAATTATCTTAGATGCCTAGGGTCCAAATTGCTCTGCTaGATATCCAAAGCATATTTC | + |
|
Preference number: 4 (lower is better) Translates to: PMAVHRILKYRNYLRCLGSKLLC*ISKAYF Trigger: GAAATATGCTTTGGATATGCAGCAGAGCAATTTGGA...CCCTAGGCATCTAAGATAATTACGGTATTTTAGTATGCGGTGTACTGCCATAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036226.6 |
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| CDS-3UTR GCA 90 bp | CAGTTTAAGCCGGTGCATAGAGAAGATAAAGCACTTATGGTAACTGCAAATGGTAGTATCGCAGTAACTTaGAGAGATGGAAACTTACAA | + |
|
Preference number: 4 (lower is better) Translates to: QFKPVHREDKALMVTANGSIAVT*RDGNLQ Trigger: TTGTAAGTTTCCATCTCTGCAAGTTACTGCGATACT...ACCATTTGCAGTTACCATAAGTGCTTTATCTTCTCTATGCACCGGCTTAAACTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036226.6 |
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| CDS-3UTR CCA 90 bp | GAGCTGCATCCTGACTGCAATACAATGCTGCAGTTTTCAAGACTAAGTAAGAACGTTATTCTTTCCTCTTaGATGCAACTTAAGAAACCT | + |
|
Preference number: 4 (lower is better) Translates to: ELHPDCNTMLQFSRLSKNVILSS*MQLKKP Trigger: AGGTTTCTTAAGTTGCATCCAAGAGGAAAGAATAAC...GTTCTTACTTAGTCTTGAAAACTGCAGCATTGTATTGCAGTCAGGATGCAGCTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036226.6 |
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| CDS-3UTR CCA 90 bp | TCTGGTCCTATGGCAGTACACCGCATACTAAAATACCGTAATTATCTTAGATGCCAGTGTCTGTGGGACTaGTTTACTAATTATATTAGT | + |
|
Preference number: 4 (lower is better) Translates to: SGPMAVHRILKYRNYLRCQCLWD*FTNYIS Trigger: ACTAATATAATTAGTAAACCAGTCCCACAGACACTG...GCATCTAAGATAATTACGGTATTTTAGTATGCGGTGTACTGCCATAGGACCAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036226.6 |
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| CDS-3UTR CCA 90 bp | TCTGGTCCTATGGCAGTACACCGCATACTAAAATACCGTAATTATCTTAGATGCCATTATCAGTGTCTGTaGGACTGGTTTACTAATTAT | + |
|
Preference number: 4 (lower is better) Translates to: SGPMAVHRILKYRNYLRCHYQCL*DWFTNY Trigger: ATAATTAGTAAACCAGTCCCACAGACACTGATAATG...GCATCTAAGATAATTACGGTATTTTAGTATGCGGTGTACTGCCATAGGACCAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036226.6 |
||
| CDS GCA 90 bp | CCGTCAAAGTTAACAGAGCCCCCGACTTCTATGGAAGCACTGCACTaGTCTAGAAGGAATTCTACCATGTCGAGGTGTCCATACCTAGCA | + |
|
Preference number: 5 (lower is better) Translates to: PSKLTEPPTSMEALH*SRRNSTMSRCPYLA Trigger: TGCTAGGTATGGACACCTCGACATGGTAGAATTCCTTCTAGAGCAGTGCAGTGCTTCCATAGAAGTCGGGGGCTCTGTTAACTTTGACGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036226.6 |
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| CDS-3UTR CAA 90 bp | TCTGGTCCTATGGCAGTACACCGCATACTAAAATACCGTAATTATCTTAGATGCCCATCGCGCGCTGCGTaGAACACCGCTGTCTTTAGA | + |
|
Preference number: 5 (lower is better) Translates to: SGPMAVHRILKYRNYLRCPSRAA*NTAVFR Trigger: TCTAAAGACAGCGGTGTTCAACGCAGCGCGCGATGG...GCATCTAAGATAATTACGGTATTTTAGTATGCGGTGTACTGCCATAGGACCAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036226.6 |
||
| CDS-3UTR CAA 90 bp | CTAAACAGCTTTTTCAAGAGCTCCAAGGGACATTTCTGGAGAAGGCAAACAGAATTGCTTGCCAGCAACTaGGTGAGGAGCCGGAGTTTG | + |
|
Preference number: 5 (lower is better) Translates to: LNSFFKSSKGHFWRRQTELLASN*VRSRSL Trigger: CAAACTCCGGCTCCTCACCAAGTTGCTGGCAAGCAA...TTCTGTTTGCCTTCTCCAGAAATGTCCCTTGGAGCTCTTGAAAAAGCTGTTTAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036226.6 |
||
| CDS-3UTR CAA 90 bp | CTAAACAGCTTTTTCAAGAGCTCCAAGGGACATTTCTGGAGAAGGCAAACAGAAGTATGCCCATGGCGGTaGGACACTTCCAAATCGGCT | + |
|
Preference number: 5 (lower is better) Translates to: LNSFFKSSKGHFWRRQTEVCPWR*DTSKSA Trigger: AGCCGATTTGGAAGTGTCCAACCGCCATGGGCATAC...TTCTGTTTGCCTTCTCCAGAAATGTCCCTTGGAGCTCTTGAAAAAGCTGTTTAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036226.6 |
||
| CDS TCA 90 bp | AGCACGCGGCTCGAAGAGGAGTTGAGTTGGTTAAAGTCGTGTTGTTaGCAGATGCTCCGTGATTTAACAAAGACTGGACAACCTTCAGAT | + |
|
Preference number: 5 (lower is better) Translates to: STRLEEELSWLKSCC*QMLRDLTKTGQPSD Trigger: ATCTGAAGGTTGTCCAGTCTTTGTTAAATCACGGAGCATCTGTCAACAACACGACTTTAACCAACTCAACTCCTCTTCGAGCCGCGTGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036226.6 |
||
| CDS TCA 90 bp | GTGCGTAAGAAAATCCACAATATTAGTGTGACCAGTCACACTTGCTaGGAGAAGAGGAGTCATTCCGTAGCCATCTTTCTCCATCTTGGC | + |
|
Preference number: 5 (lower is better) Translates to: VRKKIHNISVTSHTC*EKRSHSVAIFLHLG Trigger: GCCAAGATGGAGAAAGATGGCTACGGAATGACTCCTCTTCTCTCAGCAAGTGTGACTGGTCACACTAATATTGTGGATTTTCTTACGCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036226.6 |
||
| CDS GCA 90 bp | CTGACATTCACATCAGCACCACATTCTATCAGTATCGCAGTAACTTaGAGAGATGGAAACTTACAAACAGGGTACCGCCCCACACATGTA | + |
|
Preference number: 5 (lower is better) Translates to: LTFTSAPHSISIAVT*RDGNLQTGYRPTHV Trigger: TACATGTGTGGGGCGGTACCCTGTTTGTAAGTTTCCATCTCTGCAAGTTACTGCGATACTGATAGAATGTGGTGCTGATGTGAATGTCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036226.6 |
||
| CDS-3UTR CAA 90 bp | GCTTTTTCAAGAGCTCCAAGGGACATTTCTGGAGAAGGCAAACAGAAGAGGGAGCTTAAAGGGTCCAAATaGCTCTGCTGCATATCCAAA | + |
|
Preference number: 5 (lower is better) Translates to: AFSRAPRDISGEGKQKRELKGSK*LCCISK Trigger: TTTGGATATGCAGCAGAGCAATTTGGACCCTTTAAG...CTCCCTCTTCTGTTTGCCTTCTCCAGAAATGTCCCTTGGAGCTCTTGAAAAAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036226.6 |
||
| CDS-3UTR CAA 90 bp | CTAAACAGCTTTTTCAAGAGCTCCAAGGGACATTTCTGGAGAAGGCAAACAGAAAGCTGCTGGCAGTCATaGGGCTTAAAGGGTCCAAAT | + |
|
Preference number: 5 (lower is better) Translates to: LNSFFKSSKGHFWRRQTESCWQS*GLKGPN Trigger: ATTTGGACCCTTTAAGCCCAATGACTGCCAGCAGCT...TTCTGTTTGCCTTCTCCAGAAATGTCCCTTGGAGCTCTTGAAAAAGCTGTTTAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036226.6 |
||
| CDS-3UTR CAA 90 bp | GCTTTTTCAAGAGCTCCAAGGGACATTTCTGGAGAAGGCAAACAGAAGAGGGAGATTTCAAGGACACTTTaGCACAGTATGCCCATGAGA | + |
|
Preference number: 5 (lower is better) Translates to: AFSRAPRDISGEGKQKREISRTL*HSMPMR Trigger: TCTCATGGGCATACTGTGCAAAAGTGTCCTTGAAAT...CTCCCTCTTCTGTTTGCCTTCTCCAGAAATGTCCCTTGGAGCTCTTGAAAAAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036226.6 |
||
| CDS TCA 90 bp | AGAGGAGTTGAGTTGGTTAAAGTCGTGTTGTTGACAGATGCTCCGTaGTTTAACAAAGACTGGACAACCTTCAGATGTCCTGCTGCAGAA | + |
|
Preference number: 5 (lower is better) Translates to: RGVELVKVVLLTDAP*FNKDWTTFRCPAAE Trigger: TTCTGCAGCAGGACATCTGAAGGTTGTCCAGTCTTTGTTAAATCACGGAGCATCTGTCAACAACACGACTTTAACCAACTCAACTCCTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036226.6 |
||
| CDS CCA 90 bp | TCCAAATCGGCTTTGTGTTCTACAAGGTATTTCACTATTTCCAAATaGCCATCGAAGCACGCGGCTCGAAGAGGAGTTGAGTTGGTTAAA | + |
|
Preference number: 5 (lower is better) Translates to: SKSALCSTRYFTISK*PSKHAARRGVELVK Trigger: TTTAACCAACTCAACTCCTCTTCGAGCCGCGTGCTTCGATGGCCATTTGGAAATAGTGAAATACCTTGTAGAACACAAAGCCGATTTGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036226.6 |
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| CDS-3UTR CAA 90 bp | TCTGGTCCTATGGCAGTACACCGCATACTAAAATACCGTAATTATCTTAGATGCCGGCTCGAAGAGGAGTaGAGTTGGTTAAAGTCGTGT | + |
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Preference number: 5 (lower is better) Translates to: SGPMAVHRILKYRNYLRCRLEEE*SWLKSC Trigger: ACACGACTTTAACCAACTCAACTCCTCTTCGAGCCG...GCATCTAAGATAATTACGGTATTTTAGTATGCGGTGTACTGCCATAGGACCAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036226.6 |
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| CDS-3UTR CAA 90 bp | GCTTTTTCAAGAGCTCCAAGGGACATTTCTGGAGAAGGCAAACAGAAGAGGGAGTCTGTTTGTGTAAGTTaGTGGCATCAAAATGTGCAC | + |
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Preference number: 5 (lower is better) Translates to: AFSRAPRDISGEGKQKRESVCVS*WHQNVH Trigger: GTGCACATTTTGATGCCACAAACTTACACAAACAGA...CTCCCTCTTCTGTTTGCCTTCTCCAGAAATGTCCCTTGGAGCTCTTGAAAAAGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036226.6 |
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| CDS-3UTR CAA 90 bp | CCTATGGCAGTACACCGCATACTAAAATACCGTAATTATCTTAGATGCCTAGGGCCATCTTTCTCCATCTaGGCACAATACATAAGCAGC | + |
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Preference number: 5 (lower is better) Translates to: PMAVHRILKYRNYLRCLGPSFSI*AQYISS Trigger: GCTGCTTATGTATTGTGCCAAGATGGAGAAAGATGG...CCCTAGGCATCTAAGATAATTACGGTATTTTAGTATGCGGTGTACTGCCATAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036226.6 |
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| CDS-3UTR CAA 90 bp | TCTGGTCCTATGGCAGTACACCGCATACTAAAATACCGTAATTATCTTAGATGCTTAATACGTTCTGTCTaGCTTGTCTGGGCATGGTGC | + |
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Preference number: 5 (lower is better) Translates to: SGPMAVHRILKYRNYLRCLIRSV*LVWAWC Trigger: GCACCATGCCCAGACAAGCAAGACAGAACGTATTAA...GCATCTAAGATAATTACGGTATTTTAGTATGCGGTGTACTGCCATAGGACCAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036226.6 |
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| CDS TCA 90 bp | GCTTTTCTGGGATGTTCCCTTTGTAATAGATTCTATGATTCACGATaGCACGAGCAGCAAGACACTGCAATGTGGTATGATTTATGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: AFLGCSLCNRFYDSR*HEQQDTAMWYDLWA Trigger: AGCCCATAAATCATACCACATTGCAGTGTCTTGCTGCTCGTGTCATCGTGAATCATAGAATCTATTACAAAGGGAACATCCCAGAAAAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036226.6 |
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| CDS CCA 90 bp | GTCCTTTATAGCATGAAATCATCAAGCAAGTATGCCCATGGCGGTTaGACACTTCCAAATCGGCTTTGTGTTCTACAAGGTATTTCACTA | + |
|
Preference number: 5 (lower is better) Translates to: VLYSMKSSSKYAHGG*TLPNRLCVLQGISL Trigger: TAGTGAAATACCTTGTAGAACACAAAGCCGATTTGGAAGTGTCCAACCGCCATGGGCATACTTGCTTGATGATTTCATGCTATAAAGGAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036226.6 |
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| CDS-3UTR CAA 90 bp | TCTGGTCCTATGGCAGTACACCGCATACTAAAATACCGTAATTATCTTAGATGCCGAAGAGGAGTTGAGTaGGTTAAAGTCGTGTTGTTG | + |
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Preference number: 5 (lower is better) Translates to: SGPMAVHRILKYRNYLRCRRGVE*VKVVLL Trigger: CAACAACACGACTTTAACCAACTCAACTCCTCTTCG...GCATCTAAGATAATTACGGTATTTTAGTATGCGGTGTACTGCCATAGGACCAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036226.6 |
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| CDS-3UTR CAA 90 bp | TCTGGTCCTATGGCAGTACACCGCATACTAAAATACCGTAATTATCTTAGATGCAGCTGGACACTGAGTTaGTTTGATAGCTCGCTCAAT | + |
|
Preference number: 5 (lower is better) Translates to: SGPMAVHRILKYRNYLRCSWTLS*FDSSLN Trigger: ATTGAGCGAGCTATCAAACAAACTCAGTGTCCAGCT...GCATCTAAGATAATTACGGTATTTTAGTATGCGGTGTACTGCCATAGGACCAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036226.6 |
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| CDS-3UTR CAA 90 bp | TCTGGTCCTATGGCAGTACACCGCATACTAAAATACCGTAATTATCTTAGATGCATATGTAGGGGACTGTaGTCATCAGAGTCTCTGACA | + |
|
Preference number: 5 (lower is better) Translates to: SGPMAVHRILKYRNYLRCICRGL*SSESLT Trigger: TGTCAGAGACTCTGATGACAACAGTCCCCTACATAT...GCATCTAAGATAATTACGGTATTTTAGTATGCGGTGTACTGCCATAGGACCAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036226.6 |
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| CDS-3UTR CAA 90 bp | CAGTTTAAGCCGGTGCATAGAGAAGATAAAGCACTTATGGTAACTGCAAATGGTTCACTGGCAGTCTGTTaGTGTAAGTTTGTGGCATCA | + |
|
Preference number: 5 (lower is better) Translates to: QFKPVHREDKALMVTANGSLAVC*CKFVAS Trigger: TGATGCCACAAACTTACACAAACAGACTGCCAGTGA...ACCATTTGCAGTTACCATAAGTGCTTTATCTTCTCTATGCACCGGCTTAAACTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036226.6 |
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| CDS-3UTR CAA 90 bp | GAGCTGCATCCTGACTGCAATACAATGCTGCAGTTTTCAAGACTAAGTAAGAACACTTCCAAATCGGCTTaGTGTTCTACAAGGTATTTC | + |
|
Preference number: 5 (lower is better) Translates to: ELHPDCNTMLQFSRLSKNTSKSA*CSTRYF Trigger: GAAATACCTTGTAGAACACAAAGCCGATTTGGAAGT...GTTCTTACTTAGTCTTGAAAACTGCAGCATTGTATTGCAGTCAGGATGCAGCTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036226.6 |
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| CDS-3UTR CAA 90 bp | TCTGGTCCTATGGCAGTACACCGCATACTAAAATACCGTAATTATCTTAGATGCCAGTATCGCAGTAACTaGCAGAGATGGAAACTTACA | + |
|
Preference number: 5 (lower is better) Translates to: SGPMAVHRILKYRNYLRCQYRSN*QRWKLT Trigger: TGTAAGTTTCCATCTCTGCAAGTTACTGCGATACTG...GCATCTAAGATAATTACGGTATTTTAGTATGCGGTGTACTGCCATAGGACCAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036226.6 |
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| CDS GCA 90 bp | ACAATACATAAGCAGCATCTTCATGATGTCCAAACTTCCAGACTCTaGACAATCATGCAATGCAGTGTTGCCTTTAACACTTTTTCTGTT | + |
|
Preference number: 5 (lower is better) Translates to: TIHKQHLHDVQTSRL*TIMQCSVAFNTFSV Trigger: AACAGAAAAAGTGTTAAAGGCAACACTGCATTGCATGATTGTGCAGAGTCTGGAAGTTTGGACATCATGAAGATGCTGCTTATGTATTGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036226.6 |
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| CDS CAA 72 bp | GAGGAAACCTCCGCTTTCGATTTGCTTGCCAGCAACTaGGTGAGGAGCCGGAGTTTGCCATCGCGCGCTGCG | + |
|
Preference number: 6 (lower is better) Translates to: EETSAFDLLASN*VRSRSLPSRAA Trigger: CGCAGCGCGCGATGGCAAACTCCGGCTCCTCACCAAGTTGCTGGCAAGCAAATCGAAAGCGGAGGTTTCCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036226.6 |
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| CDS CAA 72 bp | GATTTGCTTGCCAGCAACTTGGTGAGGAGCCGGAGTTaGCCATCGCGCGCTGCGTTGAACACCGCTGTCTTT | + |
|
Preference number: 6 (lower is better) Translates to: DLLASNLVRSRS*PSRAALNTAVF Trigger: AAAGACAGCGGTGTTCAACGCAGCGCGCGATGGCAAACTCCGGCTCCTCACCAAGTTGCTGGCAAGCAAATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036226.6 |
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| CDS CAA 90 bp | GAGATTAAGGAGGAAACCTCCGCTTTCGATTTGCTTGCCAGCAACTaGGTGAGGAGCCGGAGTTTGCCATCGCGCGCTGCGTTGAACACC | + |
|
Preference number: 6 (lower is better) Translates to: EIKEETSAFDLLASN*VRSRSLPSRAALNT Trigger: GGTGTTCAACGCAGCGCGCGATGGCAAACTCCGGCTCCTCACCAAGTTGCTGGCAAGCAAATCGAAAGCGGAGGTTTCCTCCTTAATCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036226.6 |
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| CDS CAA 90 bp | CCATTTGTTTTCTCCGAGATTAAGGAGGAAACCTCCGCTTTCGATTaGCTTGCCAGCAACTTGGTGAGGAGCCGGAGTTTGCCATCGCGC | + |
|
Preference number: 6 (lower is better) Translates to: PFVFSEIKEETSAFD*LASNLVRSRSLPSR Trigger: GCGCGATGGCAAACTCCGGCTCCTCACCAAGTTGCTGGCAAGCAAATCGAAAGCGGAGGTTTCCTCCTTAATCTCGGAGAAAACAAATGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036226.6 |
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| CDS CAA 72 bp | TTCTCCGAGATTAAGGAGGAAACCTCCGCTTTCGATTaGCTTGCCAGCAACTTGGTGAGGAGCCGGAGTTTG | + |
|
Preference number: 6 (lower is better) Translates to: FSEIKEETSAFD*LASNLVRSRSL Trigger: CAAACTCCGGCTCCTCACCAAGTTGCTGGCAAGCAAATCGAAAGCGGAGGTTTCCTCCTTAATCTCGGAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036226.6 |
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| CDS GCA 72 bp | TTAACAGAGCCCCCGACTTCTATGGAAGCACTGCACTaGTCTAGAAGGAATTCTACCATGTCGAGGTGTCCA | + |
|
Preference number: 6 (lower is better) Translates to: LTEPPTSMEALH*SRRNSTMSRCP Trigger: TGGACACCTCGACATGGTAGAATTCCTTCTAGAGCAGTGCAGTGCTTCCATAGAAGTCGGGGGCTCTGTTAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036226.6 |
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| CDS CAA 72 bp | GGATGGTTATTCAGAGCCGCGATATGTAGGGGACTGTaGTCATCAGAGTCTCTGACATTCACATCAGCACCA | + |
|
Preference number: 6 (lower is better) Translates to: GWLFRAAICRGL*SSESLTFTSAP Trigger: TGGTGCTGATGTGAATGTCAGAGACTCTGATGACAACAGTCCCCTACATATCGCGGCTCTGAATAACCATCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036226.6 |
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| CDS GCA 72 bp | ACATCAGCACCACATTCTATCAGTATCGCAGTAACTTaGAGAGATGGAAACTTACAAACAGGGTACCGCCCC | + |
|
Preference number: 6 (lower is better) Translates to: TSAPHSISIAVT*RDGNLQTGYRP Trigger: GGGGCGGTACCCTGTTTGTAAGTTTCCATCTCTGCAAGTTACTGCGATACTGATAGAATGTGGTGCTGATGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036226.6 |
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| CDS CCA 72 bp | GCTTTGTGTTCTACAAGGTATTTCACTATTTCCAAATaGCCATCGAAGCACGCGGCTCGAAGAGGAGTTGAG | + |
|
Preference number: 6 (lower is better) Translates to: ALCSTRYFTISK*PSKHAARRGVE Trigger: CTCAACTCCTCTTCGAGCCGCGTGCTTCGATGGCCATTTGGAAATAGTGAAATACCTTGTAGAACACAAAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036226.6 |
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| CDS CAA 72 bp | GCTCCCAGAAGCTCTAGAGCATTAATACGTTCTGTCTaGCTTGTCTGGGCATGGTGCGTAAGAAAATCCACA | + |
|
Preference number: 6 (lower is better) Translates to: APRSSRALIRSV*LVWAWCVRKST Trigger: TGTGGATTTTCTTACGCACCATGCCCAGACAAGCAAGACAGAACGTATTAATGCTCTAGAGCTTCTGGGAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036226.6 |
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| CDS CAA 72 bp | CACATCAGCACCACATTCTATCAGTATCGCAGTAACTaGCAGAGATGGAAACTTACAAACAGGGTACCGCCC | + |
|
Preference number: 6 (lower is better) Translates to: HISTTFYQYRSN*QRWKLTNRVPP Trigger: GGGCGGTACCCTGTTTGTAAGTTTCCATCTCTGCAAGTTACTGCGATACTGATAGAATGTGGTGCTGATGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036226.6 |
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| CDS CAA 90 bp | TCTGACATTCACATCAGCACCACATTCTATCAGTATCGCAGTAACTaGCAGAGATGGAAACTTACAAACAGGGTACCGCCCCACACATGT | + |
|
Preference number: 6 (lower is better) Translates to: SDIHISTTFYQYRSN*QRWKLTNRVPPHTC Trigger: ACATGTGTGGGGCGGTACCCTGTTTGTAAGTTTCCATCTCTGCAAGTTACTGCGATACTGATAGAATGTGGTGCTGATGTGAATGTCAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036226.6 |
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| CDS GCA 72 bp | AGCTGCTGGCAGTCATTGGGCTTAAAGGGTCCAAATTaGTCTGCTGCATATCCAAAGCATATTTCCATAGGT | + |
|
Preference number: 6 (lower is better) Translates to: SCWQSLGLKGPN*SAAYPKHISIG Trigger: ACCTATGGAAATATGCTTTGGATATGCAGCAGAGCAATTTGGACCCTTTAAGCCCAATGACTGCCAGCAGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036226.6 |
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| CDS CCA 72 bp | AGCATGAAATCATCAAGCAAGTATGCCCATGGCGGTTaGACACTTCCAAATCGGCTTTGTGTTCTACAAGGT | + |
|
Preference number: 6 (lower is better) Translates to: SMKSSSKYAHGG*TLPNRLCVLQG Trigger: ACCTTGTAGAACACAAAGCCGATTTGGAAGTGTCCAACCGCCATGGGCATACTTGCTTGATGATTTCATGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036226.6 |
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| CDS CAA 72 bp | ATCTCCTTCTCGTCCAGCAAGTCACTGGCAGTCTGTTaGTGTAAGTTTGTGGCATCAAAATGTGCACCTGAT | + |
|
Preference number: 6 (lower is better) Translates to: ISFSSSKSLAVC*CKFVASKCAPD Trigger: ATCAGGTGCACATTTTGATGCCACAAACTTACACAAACAGACTGCCAGTGACTTGCTGGACGAGAAGGAGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036226.6 |
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| CDS CAA 90 bp | ATCAAGCAAGTATGCCCATGGCGGTTGGACACTTCCAAATCGGCTTaGTGTTCTACAAGGTATTTCACTATTTCCAAATGGCCATCGAAG | + |
|
Preference number: 6 (lower is better) Translates to: IKQVCPWRLDTSKSA*CSTRYFTISKWPSK Trigger: CTTCGATGGCCATTTGGAAATAGTGAAATACCTTGTAGAACACAAAGCCGATTTGGAAGTGTCCAACCGCCATGGGCATACTTGCTTGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036226.6 |
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| CDS GCA 72 bp | CTGGCAGTCATTGGGCTTAAAGGGTCCAAATTGCTCTaGTGCATATCCAAAGCATATTTCCATAGGTTGATG | + |
|
Preference number: 6 (lower is better) Translates to: LAVIGLKGSKLL*CISKAYFHRLM Trigger: CATCAACCTATGGAAATATGCTTTGGATATGCAGCAGAGCAATTTGGACCCTTTAAGCCCAATGACTGCCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036226.6 |
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| CDS CCA 72 bp | GCACCTGATTTAATAAGGAGATTCATGATGTCTGGATaGTTATTCAGAGCCGCGATATGTAGGGGACTGTTG | + |
|
Preference number: 6 (lower is better) Translates to: APDLIRRFMMSG*LFRAAICRGLL Trigger: CAACAGTCCCCTACATATCGCGGCTCTGAATAACCATCCAGACATCATGAATCTCCTTATTAAATCAGGTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036226.6 |
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| CDS CAA 90 bp | ACAAACGTAGCTCCCAGAAGCTCTAGAGCATTAATACGTTCTGTCTaGCTTGTCTGGGCATGGTGCGTAAGAAAATCCACAATATTAGTG | + |
|
Preference number: 6 (lower is better) Translates to: TNVAPRSSRALIRSV*LVWAWCVRKSTILV Trigger: CACTAATATTGTGGATTTTCTTACGCACCATGCCCAGACAAGCAAGACAGAACGTATTAATGCTCTAGAGCTTCTGGGAGCTACGTTTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036226.6 |
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| CDS TCA 72 bp | GAGTTGGTTAAAGTCGTGTTGTTGACAGATGCTCCGTaGTTTAACAAAGACTGGACAACCTTCAGATGTCCT | + |
|
Preference number: 6 (lower is better) Translates to: ELVKVVLLTDAP*FNKDWTTFRCP Trigger: AGGACATCTGAAGGTTGTCCAGTCTTTGTTAAATCACGGAGCATCTGTCAACAACACGACTTTAACCAACTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036226.6 |
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| CDS TCA 72 bp | CTCGAAGAGGAGTTGAGTTGGTTAAAGTCGTGTTGTTaGCAGATGCTCCGTGATTTAACAAAGACTGGACAA | + |
|
Preference number: 6 (lower is better) Translates to: LEEELSWLKSCC*QMLRDLTKTGQ Trigger: TTGTCCAGTCTTTGTTAAATCACGGAGCATCTGTCAACAACACGACTTTAACCAACTCAACTCCTCTTCGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036226.6 |
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| CDS TCA 72 bp | AAAATCCACAATATTAGTGTGACCAGTCACACTTGCTaGGAGAAGAGGAGTCATTCCGTAGCCATCTTTCTC | + |
|
Preference number: 6 (lower is better) Translates to: KIHNISVTSHTC*EKRSHSVAIFL Trigger: GAGAAAGATGGCTACGGAATGACTCCTCTTCTCTCAGCAAGTGTGACTGGTCACACTAATATTGTGGATTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036226.6 |
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| CDS GCA 72 bp | AAGCAGCATCTTCATGATGTCCAAACTTCCAGACTCTaGACAATCATGCAATGCAGTGTTGCCTTTAACACT | + |
|
Preference number: 6 (lower is better) Translates to: KQHLHDVQTSRL*TIMQCSVAFNT Trigger: AGTGTTAAAGGCAACACTGCATTGCATGATTGTGCAGAGTCTGGAAGTTTGGACATCATGAAGATGCTGCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036226.6 |
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| CDS GCA 72 bp | GAAGGACCAAGAATCCGTTCTCTAATTAACAGCGCTTaGATTCTCATCTCATCAGGATCAGCAATAAGACCT | + |
|
Preference number: 6 (lower is better) Translates to: EGPRIRSLINSA*ILISSGSAIRP Trigger: AGGTCTTATTGCTGATCCTGATGAGATGAGAATGCAAGCGCTGTTAATTAGAGAACGGATTCTTGGTCCTTC 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036226.6 |
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| CDS GCA 72 bp | GCAGTCATTGGGCTTAAAGGGTCCAAATTGCTCTGCTaGATATCCAAAGCATATTTCCATAGGTTGATGCAT | + |
|
Preference number: 6 (lower is better) Translates to: AVIGLKGSKLLC*ISKAYFHRLMH Trigger: ATGCATCAACCTATGGAAATATGCTTTGGATATGCAGCAGAGCAATTTGGACCCTTTAAGCCCAATGACTGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036226.6 |
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| CDS TCA 72 bp | ACGATGACACGAGCAGCAAGACACTGCAATGTGGTATaGTTTATGGGCTGTATCAAATTTTTAGCTATCTCC | + |
|
Preference number: 6 (lower is better) Translates to: TMTRAARHCNVV*FMGCIKFLAIS Trigger: GGAGATAGCTAAAAATTTGATACAGCCCATAAATCATACCACATTGCAGTGTCTTGCTGCTCGTGTCATCGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036226.6 |
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| CDS TCA 72 bp | GGATGTTCCCTTTGTAATAGATTCTATGATTCACGATaGCACGAGCAGCAAGACACTGCAATGTGGTATGAT | + |
|
Preference number: 6 (lower is better) Translates to: GCSLCNRFYDSR*HEQQDTAMWYD Trigger: ATCATACCACATTGCAGTGTCTTGCTGCTCGTGTCATCGTGAATCATAGAATCTATTACAAAGGGAACATCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036226.6 |
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| CDS CCA 72 bp | AGCTCTAGAGCATTAATACGTTCTGTCTTGCTTGTCTaGGCATGGTGCGTAAGAAAATCCACAATATTAGTG | + |
|
Preference number: 6 (lower is better) Translates to: SSRALIRSVLLV*AWCVRKSTILV Trigger: CACTAATATTGTGGATTTTCTTACGCACCATGCCCAGACAAGCAAGACAGAACGTATTAATGCTCTAGAGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036226.6 |
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| CDS CAA 90 bp | TTTTTAGCTATCTCCTTCTCGTCCAGCAAGTCACTGGCAGTCTGTTaGTGTAAGTTTGTGGCATCAAAATGTGCACCTGATTTAATAAGG | + |
|
Preference number: 6 (lower is better) Translates to: FLAISFSSSKSLAVC*CKFVASKCAPDLIR Trigger: CCTTATTAAATCAGGTGCACATTTTGATGCCACAAACTTACACAAACAGACTGCCAGTGACTTGCTGGACGAGAAGGAGATAGCTAAAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036226.6 |
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| CDS CCA 72 bp | GGCATAGTCATAGGCCATTATCAGTGTCTGTGGGACTaGTTTACTAATTATATTAGTCCTATCACTGTACCT | + |
|
Preference number: 6 (lower is better) Translates to: GIVIGHYQCLWD*FTNYISPITVP Trigger: AGGTACAGTGATAGGACTAATATAATTAGTAAACCAGTCCCACAGACACTGATAATGGCCTATGACTATGCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036226.6 |
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| CDS GCA 72 bp | TTCATGATGTCCAAACTTCCAGACTCTGCACAATCATaGAATGCAGTGTTGCCTTTAACACTTTTTCTGTTA | + |
|
Preference number: 6 (lower is better) Translates to: FMMSKLPDSAQS*NAVLPLTLFLL Trigger: TAACAGAAAAAGTGTTAAAGGCAACACTGCATTGCATGATTGTGCAGAGTCTGGAAGTTTGGACATCATGAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036226.6 |
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