Pregenerated sensors for FEM1A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000043683Ensembl transcript IDs: ENSMUST00000060253.5
Found 150 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGTGGGCATCCTAGGTCCTCTGGGGCAGCTCCTAGAGGGGCATCCTaGAAGACGGAGGGAGAGCAGAGCCTGGGAAGTAAGCATGGAGCC | + |
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Preference number: 1 (lower is better) Translates to: GGHPRSSGAAPRGAS*KTEGEQSLGSKHGA Trigger: GGCTCCATGCTTACTTCCCAGGCTCTGCTCTCCCTCCGTCTTCCAGGATGCCCCTCTAGGAGCTGCCCCAGAGGACCTAGGATGCCCACC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060253.5 |
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| 3UTR GCA 90 bp | CATCTCAAATGTGCAGAGCCAGGCCCACGTTCTCCTCTGCAGCCTTaGAAGTGCAGGCCAGACTCTGCCCCACACCTGCTGTGCTGTCTT | + |
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Preference number: 1 (lower is better) Translates to: HLKCAEPGPRSPLQP*KCRPDSAPHLLCCL Trigger: AAGACAGCACAGCAGGTGTGGGGCAGAGTCTGGCCTGCACTTGCAAGGCTGCAGAGGAGAACGTGGGCCTGGCTCTGCACATTTGAGATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060253.5 |
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| 3UTR CCA 90 bp | CACAGATGTGAACCTGGTGGCCAGGTGGCCTGGTCACCATCTGCCTaGCAGTTCCAGCTGTGTCCCAAGGTTGGGAACTGTCTGTCCATC | + |
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Preference number: 1 (lower is better) Translates to: HRCEPGGQVAWSPSA*QFQLCPKVGNCLSI Trigger: GATGGACAGACAGTTCCCAACCTTGGGACACAGCTGGAACTGCCAGGCAGATGGTGACCAGGCCACCTGGCCACCAGGTTCACATCTGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060253.5 |
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| 3UTR TCA 90 bp | GTCCTCAGCGATGAAGGTGACAGTGTGACAAGTGTGGCACAGATGTaGACCTGGTGGCCAGGTGGCCTGGTCACCATCTGCCTGGCAGTT | + |
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Preference number: 1 (lower is better) Translates to: VLSDEGDSVTSVAQM*TWWPGGLVTICLAV Trigger: AACTGCCAGGCAGATGGTGACCAGGCCACCTGGCCACCAGGTTCACATCTGTGCCACACTTGTCACACTGTCACCTTCATCGCTGAGGAC 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060253.5 |
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| 3UTR GCA 90 bp | CTAGGTGGTCAGTGCCCACCACAGGAAGGAGACAGCTTTGCTCACTaGAGGACTCTAGGACAGTGCAGAGGCCTCCAGACCCAGACAGAA | + |
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Preference number: 1 (lower is better) Translates to: LGGQCPPQEGDSFAH*RTLGQCRGLQTQTE Trigger: TTCTGTCTGGGTCTGGAGGCCTCTGCACTGTCCTAGAGTCCTGCAGTGAGCAAAGCTGTCTCCTTCCTGTGGTGGGCACTGACCACCTAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060253.5 |
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| 3UTR GCA 90 bp | CTTCACCAGATGTGGGCTGGTCAATGCCCACTTGTCAGGCTGGAATaGTGGCCAGCCCCGTGTCCACTGCTCTGTAGCTCTCACATTCTG | + |
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Preference number: 1 (lower is better) Translates to: LHQMWAGQCPLVRLE*WPAPCPLLCSSHIL Trigger: CAGAATGTGAGAGCTACAGAGCAGTGGACACGGGGCTGGCCAGCATTCCAGCCTGACAAGTGGGCATTGACCAGCCCACATCTGGTGAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060253.5 |
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| 3UTR TCA 90 bp | CTCAACAAAAGAGGGGTCAGGTCCTCAGCGATGAAGGTGACAGTGTaGCAAGTGTGGCACAGATGTGAACCTGGTGGCCAGGTGGCCTGG | + |
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Preference number: 1 (lower is better) Translates to: LNKRGVRSSAMKVTV*QVWHRCEPGGQVAW Trigger: CCAGGCCACCTGGCCACCAGGTTCACATCTGTGCCACACTTGTCACACTGTCACCTTCATCGCTGAGGACCTGACCCCTCTTTTGTTGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060253.5 |
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| 3UTR TCA 90 bp | AAGACTTTTCCATCAGGAGGCACCATGGGCAGCAGCCTGAGCTCATaGGCACTCCCTGCCTGTCTGGTGAGAATTCCAGCCCTGGGACAA | + |
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Preference number: 1 (lower is better) Translates to: KTFPSGGTMGSSLSS*ALPACLVRIPALGQ Trigger: TTGTCCCAGGGCTGGAATTCTCACCAGACAGGCAGGGAGTGCTCATGAGCTCAGGCTGCTGCCCATGGTGCCTCCTGATGGAAAAGTCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060253.5 |
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| 3UTR GCA 90 bp | CAAACATCTAGGTGGTCAGTGCCCACCACAGGAAGGAGACAGCTTTaGTCACTGCAGGACTCTAGGACAGTGCAGAGGCCTCCAGACCCA | + |
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Preference number: 1 (lower is better) Translates to: QTSRWSVPTTGRRQL*SLQDSRTVQRPPDP Trigger: TGGGTCTGGAGGCCTCTGCACTGTCCTAGAGTCCTGCAGTGAGCAAAGCTGTCTCCTTCCTGTGGTGGGCACTGACCACCTAGATGTTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060253.5 |
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| 3UTR GCA 90 bp | ATCAGGAGGCACCATGGGCAGCAGCCTGAGCTCATGAGCACTCCCTaGCTGTCTGGTGAGAATTCCAGCCCTGGGACAAAGATAGCAACA | + |
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Preference number: 1 (lower is better) Translates to: IRRHHGQQPELMSTP*LSGENSSPGTKIAT Trigger: TGTTGCTATCTTTGTCCCAGGGCTGGAATTCTCACCAGACAGGCAGGGAGTGCTCATGAGCTCAGGCTGCTGCCCATGGTGCCTCCTGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060253.5 |
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| 3UTR CCA 90 bp | CTAGGACAGTGCAGAGGCCTCCAGACCCAGACAGAAGCATGCCACTaGGGAGGCTCAGGCATCCGGGTTTTTGTTTTTGCACTTCCACAG | + |
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Preference number: 1 (lower is better) Translates to: LGQCRGLQTQTEACH*GGSGIRVFVFALPQ Trigger: CTGTGGAAGTGCAAAAACAAAAACCCGGATGCCTGAGCCTCCCCAGTGGCATGCTTCTGTCTGGGTCTGGAGGCCTCTGCACTGTCCTAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000060253.5 |
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| 3UTR CCA 90 bp | GAGATGGCTCAGCAGTTAGCCCAGATTCCCAGAACCCACATCAGGTaGCTCACGTCCACTATAACTCCAGCTCCAGGGAGACGGACCTAC | + |
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Preference number: 1 (lower is better) Translates to: EMAQQLAQIPRTHIR*LTSTITPAPGRRTY Trigger: GTAGGTCCGTCTCCCTGGAGCTGGAGTTATAGTGGACGTGAGCCACCTGATGTGGGTTCTGGGAATCTGGGCTAACTGCTGAGCCATCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060253.5 |
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| 3UTR TCA 90 bp | AGTGAGTTTGAGTTCAACCTGGGCTTCGTGCCGATCATGACATGTTaGGGGGTGTGGGAAGTGCTGGGGGATGCCAAGGTAGCTGGGCAA | + |
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Preference number: 1 (lower is better) Translates to: SEFEFNLGFVPIMTC*GVWEVLGDAKVAGQ Trigger: TTGCCCAGCTACCTTGGCATCCCCCAGCACTTCCCACACCCCTCAACATGTCATGATCGGCACGAAGCCCAGGTTGAACTCAAACTCACT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000060253.5 |
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| 3UTR CCA 90 bp | GCAGGAATCTGTTCTTTGATCCTGCTGTTCCACCTAGGAAGAACCTaGCTGGAGGCAGCCTCTGGGACCCGCTGTATTAACCCTCCCAGA | + |
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Preference number: 1 (lower is better) Translates to: AGICSLILLFHLGRT*LEAASGTRCINPPR Trigger: TCTGGGAGGGTTAATACAGCGGGTCCCAGAGGCTGCCTCCAGCCAGGTTCTTCCTAGGTGGAACAGCAGGATCAAAGAACAGATTCCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060253.5 |
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| 3UTR GCA 90 bp | GGGCTCCAGGCTGCTGCCCATCTGCTTAGAAAAGGAAAAACCAAATaGAAACATCTAGGTGGTCAGTGCCCACCACAGGAAGGAGACAGC | + |
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Preference number: 1 (lower is better) Translates to: GLQAAAHLLRKGKTK*KHLGGQCPPQEGDS Trigger: GCTGTCTCCTTCCTGTGGTGGGCACTGACCACCTAGATGTTTGCATTTGGTTTTTCCTTTTCTAAGCAGATGGGCAGCAGCCTGGAGCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060253.5 |
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| 3UTR GCA 90 bp | GGAGGCTTCCCAGGATCTTGGTCACAGATCTGCACACACAGTTCATaGTGTTCTCAGCTGTGGCCACTGCAAAATACTGGCAACTCTCAA | + |
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Preference number: 1 (lower is better) Translates to: GGFPGSWSQICTHSS*CSQLWPLQNTGNSQ Trigger: TTGAGAGTTGCCAGTATTTTGCAGTGGCCACAGCTGAGAACAGCATGAACTGTGTGTGCAGATCTGTGACCAAGATCCTGGGAAGCCTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060253.5 |
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| 3UTR CCA 90 bp | AATCACACACTGACGGTCCTCAAGGGACAGTTTATGTGGCTTAAATaGCTGAGGGAGGGACTGGCCCCTCTACACATGACTTCCTATCCA | + |
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Preference number: 1 (lower is better) Translates to: NHTLTVLKGQFMWLK*LREGLAPLHMTSYP Trigger: TGGATAGGAAGTCATGTGTAGAGGGGCCAGTCCCTCCCTCAGCCATTTAAGCCACATAAACTGTCCCTTGAGGACCGTCAGTGTGTGATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060253.5 |
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| 3UTR TCA 90 bp | GACAACATGAAACTCTGCCTAAAGAGATTAAGAGCAAAGGGCTGGTaGGATGGCTCAGCAGTTAGCCCAGATTCCCAGAACCCACATCAG | + |
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Preference number: 1 (lower is better) Translates to: DNMKLCLKRLRAKGW*DGSAVSPDSQNPHQ Trigger: CTGATGTGGGTTCTGGGAATCTGGGCTAACTGCTGAGCCATCTCACCAGCCCTTTGCTCTTAATCTCTTTAGGCAGAGTTTCATGTTGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060253.5 |
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| 3UTR TCA 90 bp | TTGGCCGCTGTTCTCTTCCTGCTGGTGAGACTTATTACCCCCTCATaGTGGACTCAAGTGTGTTCAGCATCTACTGTATGCCAAAGATGC | + |
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Preference number: 1 (lower is better) Translates to: LAAVLFLLVRLITPS*WTQVCSASTVCQRC Trigger: GCATCTTTGGCATACAGTAGATGCTGAACACACTTGAGTCCATCATGAGGGGGTAATAAGTCTCACCAGCAGGAAGAGAACAGCGGCCAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060253.5 |
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| 3UTR GCA 90 bp | CTGCTTAGAAAAGGAAAAACCAAATGCAAACATCTAGGTGGTCAGTaGCCACCACAGGAAGGAGACAGCTTTGCTCACTGCAGGACTCTA | + |
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Preference number: 1 (lower is better) Translates to: LLRKGKTKCKHLGGQ*PPQEGDSFAHCRTL Trigger: TAGAGTCCTGCAGTGAGCAAAGCTGTCTCCTTCCTGTGGTGGGCACTGACCACCTAGATGTTTGCATTTGGTTTTTCCTTTTCTAAGCAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060253.5 |
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| 3UTR GCA 90 bp | CACAGATCTGCACACACAGTTCATGCTGTTCTCAGCTGTGGCCACTaGAAAATACTGGCAACTCTCAACTCAGTCATTACTAAGTCCAAC | + |
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Preference number: 1 (lower is better) Translates to: HRSAHTVHAVLSCGH*KILATLNSVITKSN Trigger: GTTGGACTTAGTAATGACTGAGTTGAGAGTTGCCAGTATTTTGCAGTGGCCACAGCTGAGAACAGCATGAACTGTGTGTGCAGATCTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060253.5 |
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| 3UTR GCA 90 bp | AGGCAGACATCTTCACATACCTGCATTTTAATCCATAAATATCAGTaGCAAGACTCAAAGGGGTTCATGTTTGCCCTGAGCTTTGGCAGG | + |
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Preference number: 1 (lower is better) Translates to: RQTSSHTCILIHKYQ*QDSKGFMFALSFGR Trigger: CCTGCCAAAGCTCAGGGCAAACATGAACCCCTTTGAGTCTTGGCACTGATATTTATGGATTAAAATGCAGGTATGTGAAGATGTCTGCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060253.5 |
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| 3UTR CCA 90 bp | CACACACAGTTCATGCTGTTCTCAGCTGTGGCCACTGCAAAATACTaGCAACTCTCAACTCAGTCATTACTAAGTCCAACAAACAGAAAC | + |
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Preference number: 1 (lower is better) Translates to: HTQFMLFSAVATAKY*QLSTQSLLSPTNRN Trigger: GTTTCTGTTTGTTGGACTTAGTAATGACTGAGTTGAGAGTTGCCAGTATTTTGCAGTGGCCACAGCTGAGAACAGCATGAACTGTGTGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060253.5 |
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| 3UTR-3UTR TCA 90 bp | CAGATGTGGGCTGGTCAATGCCCACTTGTCAGGCTGGAATGCTGGCCAGCCCCGGGTTCATGTTTGCCCTaGGCTTTGGCAGGGTGGAGC | + |
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Preference number: 2 (lower is better) Translates to: QMWAGQCPLVRLECWPAPGSCLP*ALAGWS Trigger: GCTCCACCCTGCCAAAGCTCAGGGCAAACATGAACC...CGGGGCTGGCCAGCATTCCAGCCTGACAAGTGGGCATTGACCAGCCCACATCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060253.5 |
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| 3UTR-3UTR CCA 90 bp | GTGGGCTGGTCAATGCCCACTTGTCAGGCTGGAATGCTGGCCAGCCCCGTGTCCCTGGATGCTTCTGCTTaGAGGAGTAAGGCCCAAGTG | + |
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Preference number: 2 (lower is better) Translates to: VGWSMPTCQAGMLASPVSLDASA*RSKAQV Trigger: CACTTGGGCCTTACTCCTCCAAGCAGAAGCATCCAG...GGACACGGGGCTGGCCAGCATTCCAGCCTGACAAGTGGGCATTGACCAGCCCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060253.5 |
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| 3UTR-3UTR TCA 90 bp | CATCTCAAATGTGCAGAGCCAGGCCCACGTTCTCCTCTGCAGCCTTGCAAGTGCTGTGGCTTAAATGGCTaGGGGAGGGACTGGCCCCTC | + |
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Preference number: 2 (lower is better) Translates to: HLKCAEPGPRSPLQPCKCCGLNG*GRDWPL Trigger: GAGGGGCCAGTCCCTCCCTCAGCCATTTAAGCCACA...GCACTTGCAAGGCTGCAGAGGAGAACGTGGGCCTGGCTCTGCACATTTGAGATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060253.5 |
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| 3UTR CAA 90 bp | TTAAGGCTGGGTGGGCCCTGTGGTGGCTTGGCAGGAATCTGTTCTTaGATCCTGCTGTTCCACCTAGGAAGAACCTGGCTGGAGGCAGCC | + |
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Preference number: 2 (lower is better) Translates to: LRLGGPCGGLAGICS*ILLFHLGRTWLEAA Trigger: GGCTGCCTCCAGCCAGGTTCTTCCTAGGTGGAACAGCAGGATCAAAGAACAGATTCCTGCCAAGCCACCACAGGGCCCACCCAGCCTTAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060253.5 |
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| 3UTR-3UTR GCA 90 bp | GGCCGCTGTTCTCTTCCTGCTGGTGAGACTTATTACCCCCTCATGATGGACTCAGTGCAGGCCAGACTCTaGCCCACACCTGCTGTGCTG | + |
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Preference number: 2 (lower is better) Translates to: GRCSLPAGETYYPLMMDSVQARL*PTPAVL Trigger: CAGCACAGCAGGTGTGGGGCAGAGTCTGGCCTGCAC...TGAGTCCATCATGAGGGGGTAATAAGTCTCACCAGCAGGAAGAGAACAGCGGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060253.5 |
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| 3UTR-3UTR GCA 90 bp | GAGTGCCAAGTGAGGTGGTTCTGTGCTGGGCTATGTTTAACCTGGGGTCAGGACGAAGGCACCAGTGTCTaGCTGGCTGTGGCTCTTGCA | + |
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Preference number: 2 (lower is better) Translates to: ECQVRWFCAGLCLTWGQDEGTSV*LAVALA Trigger: TGCAAGAGCCACAGCCAGGCAGACACTGGTGCCTTC...GTCCTGACCCCAGGTTAAACATAGCCCAGCACAGAACCACCTCACTTGGCACTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060253.5 |
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| 3UTR-3UTR CCA 90 bp | CCCCTAGGGTGGCATCTCAAATGTGCAGAGCCAGGCCCACGTTCTCCTCTGCAGATGCAAACATCTAGGTaGTCAGTGCCCACCACAGGA | + |
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Preference number: 2 (lower is better) Translates to: PLGWHLKCAEPGPRSPLQMQTSR*SVPTTG Trigger: TCCTGTGGTGGGCACTGACCACCTAGATGTTTGCAT...CTGCAGAGGAGAACGTGGGCCTGGCTCTGCACATTTGAGATGCCACCCTAGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060253.5 |
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| 3UTR-3UTR CCA 90 bp | GTGCCAAGTGAGGTGGTTCTGTGCTGGGCTATGTTTAACCTGGGGTCAGGACACGCACCAGTGTCTGCCTaGCTGTGGCTCTTGCAACTG | + |
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Preference number: 2 (lower is better) Translates to: VPSEVVLCWAMFNLGSGHAPVSA*LWLLQL Trigger: CAGTTGCAAGAGCCACAGCCAGGCAGACACTGGTGC...GTGTCCTGACCCCAGGTTAAACATAGCCCAGCACAGAACCACCTCACTTGGCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060253.5 |
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| 3UTR-3UTR CCA 90 bp | GCCAGGAGGCAGTTCAAGACCAGCTTGGACAACATGAAACTCTGCCTAAAGAGAGGTGGCCAGGTGGCCTaGTCACCATCTGCCTGGCAG | + |
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Preference number: 2 (lower is better) Translates to: ARRQFKTSLDNMKLCLKRGGQVA*SPSAWQ Trigger: CTGCCAGGCAGATGGTGACCAGGCCACCTGGCCACC...TCTCTTTAGGCAGAGTTTCATGTTGTCCAAGCTGGTCTTGAACTGCCTCCTGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060253.5 |
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| 3UTR-3UTR CCA 90 bp | GTGCCAAGTGAGGTGGTTCTGTGCTGGGCTATGTTTAACCTGGGGTCAGGACACGTACATTTGAGCACGTaGGGTGCAGCAGGGACTCAG | + |
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Preference number: 2 (lower is better) Translates to: VPSEVVLCWAMFNLGSGHVHLST*GAAGTQ Trigger: CTGAGTCCCTGCTGCACCCCACGTGCTCAAATGTAC...GTGTCCTGACCCCAGGTTAAACATAGCCCAGCACAGAACCACCTCACTTGGCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060253.5 |
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| 3UTR CAA 90 bp | AGCCCTGGAAGTGCTAAGATGTTGGGTGTGTGCCACCACGCATGCTaGACAGGCACTCACCTGGCTCCCGCTCTACCTAGCTACATTAAA | + |
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Preference number: 2 (lower is better) Translates to: SPGSAKMLGVCHHAC*TGTHLAPALPSYIK Trigger: TTTAATGTAGCTAGGTAGAGCGGGAGCCAGGTGAGTGCCTGTCAAGCATGCGTGGTGGCACACACCCAACATCTTAGCACTTCCAGGGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060253.5 |
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| 3UTR-3UTR GCA 90 bp | AACAACCAACCAACCAACCAGAACTCCATATGCTCCAGTCATTCAGCTCCCACAGGCCTCTGCAGGCCCTaGGCTCAAATGCACACACCC | + |
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Preference number: 2 (lower is better) Translates to: NNQPTNQNSICSSHSAPTGLCRP*AQMHTP Trigger: GGGTGTGTGCATTTGAGCGCAGGGCCTGCAGAGGCC...TGTGGGAGCTGAATGACTGGAGCATATGGAGTTCTGGTTGGTTGGTTGGTTGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060253.5 |
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| 3UTR-3UTR GCA 90 bp | GAGTGCCAAGTGAGGTGGTTCTGTGCTGGGCTATGTTTAACCTGGGGTCAGGACTTTGAGCACGTGGGGTaGAGCAGGGACTCAGTAAAT | + |
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Preference number: 2 (lower is better) Translates to: ECQVRWFCAGLCLTWGQDFEHVG*SRDSVN Trigger: ATTTACTGAGTCCCTGCTGCACCCCACGTGCTCAAA...GTCCTGACCCCAGGTTAAACATAGCCCAGCACAGAACCACCTCACTTGGCACTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060253.5 |
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| 3UTR-3UTR CCA 90 bp | GCCAGGAGGCAGTTCAAGACCAGCTTGGACAACATGAAACTCTGCCTAAAGAGAGTGTCTGCCTGGCTGTaGCTCTTGCAACTGGCTCTG | + |
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Preference number: 2 (lower is better) Translates to: ARRQFKTSLDNMKLCLKRVSAWL*LLQLAL Trigger: CAGAGCCAGTTGCAAGAGCCACAGCCAGGCAGACAC...TCTCTTTAGGCAGAGTTTCATGTTGTCCAAGCTGGTCTTGAACTGCCTCCTGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060253.5 |
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| 3UTR-3UTR CCA 90 bp | GGCCGCTGTTCTCTTCCTGCTGGTGAGACTTATTACCCCCTCATGATGGACTCAGAGGTGGTTCTGTGCTaGGCTATGTTTAACCTGGGG | + |
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Preference number: 2 (lower is better) Translates to: GRCSLPAGETYYPLMMDSEVVLC*AMFNLG Trigger: CCCCAGGTTAAACATAGCCCAGCACAGAACCACCTC...TGAGTCCATCATGAGGGGGTAATAAGTCTCACCAGCAGGAAGAGAACAGCGGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060253.5 |
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| 3UTR-3UTR TCA 90 bp | GCTCAGCAGTTAGCCCAGATTCCCAGAACCCACATCAGGTGGCTCACGTCCACTGCTGTGCTATCTACATaGATAGAGACCAGAGAACCA | + |
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Preference number: 2 (lower is better) Translates to: AQQLAQIPRTHIRWLTSTAVLST*IETREP Trigger: TGGTTCTCTGGTCTCTATTCATGTAGATAGCACAGC...AGTGGACGTGAGCCACCTGATGTGGGTTCTGGGAATCTGGGCTAACTGCTGAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060253.5 |
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| 3UTR-3UTR GCA 90 bp | CATCTCAAATGTGCAGAGCCAGGCCCACGTTCTCCTCTGCAGCCTTGCAAGTGCTCTTGGTCACAGATCTaGACACACAGTTCATGCTGT | + |
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Preference number: 2 (lower is better) Translates to: HLKCAEPGPRSPLQPCKCSWSQI*THSSCC Trigger: ACAGCATGAACTGTGTGTGCAGATCTGTGACCAAGA...GCACTTGCAAGGCTGCAGAGGAGAACGTGGGCCTGGCTCTGCACATTTGAGATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060253.5 |
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| 3UTR-3UTR CCA 90 bp | GGCCGCTGTTCTCTTCCTGCTGGTGAGACTTATTACCCCCTCATGATGGACTCATGTTATGCCTGGAGTTaGTGCCCAAAGAGGGTAGTC | + |
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Preference number: 2 (lower is better) Translates to: GRCSLPAGETYYPLMMDSCYAWS*CPKRVV Trigger: GACTACCCTCTTTGGGCACCAACTCCAGGCATAACA...TGAGTCCATCATGAGGGGGTAATAAGTCTCACCAGCAGGAAGAGAACAGCGGCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060253.5 |
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| 3UTR-3UTR TCA 90 bp | GCTCAGCAGTTAGCCCAGATTCCCAGAACCCACATCAGGTGGCTCACGTCCACTCTAATTCTGACAGCATaGAGAACATGGGGTTCAAAC | + |
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Preference number: 2 (lower is better) Translates to: AQQLAQIPRTHIRWLTSTLILTA*RTWGSN Trigger: GTTTGAACCCCATGTTCTTCATGCTGTCAGAATTAG...AGTGGACGTGAGCCACCTGATGTGGGTTCTGGGAATCTGGGCTAACTGCTGAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060253.5 |
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| 3UTR-3UTR CCA 90 bp | AACAACCAACCAACCAACCAGAACTCCATATGCTCCAGTCATTCAGCTCCCACAAAAACCCTCACAACATaGGCTCCAGGCTGCTGCCCA | + |
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Preference number: 2 (lower is better) Translates to: NNQPTNQNSICSSHSAPTKTLTT*APGCCP Trigger: TGGGCAGCAGCCTGGAGCCCATGTTGTGAGGGTTTT...TGTGGGAGCTGAATGACTGGAGCATATGGAGTTCTGGTTGGTTGGTTGGTTGTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060253.5 |
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| 3UTR-3UTR CCA 90 bp | CAGTTTATGTGGCTTAAATGGCTGAGGGAGGGACTGGCCCCTCTACACATGACTTGCTGTTCTCAGCTGTaGCCACTGCAAAATACTGGC | + |
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Preference number: 2 (lower is better) Translates to: QFMWLKWLREGLAPLHMTCCSQL*PLQNTG Trigger: GCCAGTATTTTGCAGTGGCCACAGCTGAGAACAGCA...AGTCATGTGTAGAGGGGCCAGTCCCTCCCTCAGCCATTTAAGCCACATAAACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060253.5 |
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| 3UTR-3UTR CCA 90 bp | TCACATGGCAGTGATCTCAGCCAGGAGGCAGTTCAAGACCAGCTTGGACAACATGGCTCTGGGCTTTCTTaGGAGATAGTCCTCTCTCTA | + |
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Preference number: 2 (lower is better) Translates to: SHGSDLSQEAVQDQLGQHGSGLS*EIVLSL Trigger: TAGAGAGAGGACTATCTCCCAAGAAAGCCCAGAGCC...ATGTTGTCCAAGCTGGTCTTGAACTGCCTCCTGGCTGAGATCACTGCCATGTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060253.5 |
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| 3UTR-3UTR GCA 90 bp | AGGCTTCTGCAGGTCAGAGTCAATCAAGCTCACTTGGTATTTGTTGCTTGTTTTGGCCTGGTCACCATCTaGCTGGCAGTTCCAGCTGTG | + |
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Preference number: 2 (lower is better) Translates to: RLLQVRVNQAHLVFVACFGLVTI*LAVPAV Trigger: CACAGCTGGAACTGCCAGGCAGATGGTGACCAGGCC...AAAACAAGCAACAAATACCAAGTGAGCTTGATTGACTCTGACCTGCAGAAGCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060253.5 |
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| 3UTR-3UTR GCA 90 bp | CATCTCAAATGTGCAGAGCCAGGCCCACGTTCTCCTCTGCAGCCTTGCAAGTGCATCCATAAATATCAGTaGCAAGACTCAAAGGGGTTC | + |
|
Preference number: 2 (lower is better) Translates to: HLKCAEPGPRSPLQPCKCIHKYQ*QDSKGF Trigger: GAACCCCTTTGAGTCTTGGCACTGATATTTATGGAT...GCACTTGCAAGGCTGCAGAGGAGAACGTGGGCCTGGCTCTGCACATTTGAGATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060253.5 |
||
| 3UTR-3UTR GCA 90 bp | GCTCAGCAGTTAGCCCAGATTCCCAGAACCCACATCAGGTGGCTCACGTCCACTCTGAGCCGTCTCTCCTaGACTAATCTTTTTGTTTTT | + |
|
Preference number: 2 (lower is better) Translates to: AQQLAQIPRTHIRWLTSTLSRLS*TNLFVF Trigger: AAAAACAAAAAGATTAGTGCAGGAGAGACGGCTCAG...AGTGGACGTGAGCCACCTGATGTGGGTTCTGGGAATCTGGGCTAACTGCTGAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060253.5 |
||
| 3UTR-3UTR GCA 90 bp | GGGTCAGGACACTCCCTACTTAGAAATACCAGACACTGGTACAGCCATGTGGCAGCTCCCAGTCTAATCTaGCCACTTGCTATGGTATTG | + |
|
Preference number: 2 (lower is better) Translates to: GSGHSLLRNTRHWYSHVAAPSLI*PLAMVL Trigger: CAATACCATAGCAAGTGGGCAGATTAGACTGGGAGC...TGCCACATGGCTGTACCAGTGTCTGGTATTTCTAAGTAGGGAGTGTCCTGACCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060253.5 |
||
| 3UTR-3UTR GCA 90 bp | TCACATGGCAGTGATCTCAGCCAGGAGGCAGTTCAAGACCAGCTTGGACAACATGTAGATCTGACTGAGTaGCAAGTGAGGTGGTTCTGT | + |
|
Preference number: 2 (lower is better) Translates to: SHGSDLSQEAVQDQLGQHVDLTE*QVRWFC Trigger: ACAGAACCACCTCACTTGGCACTCAGTCAGATCTAC...ATGTTGTCCAAGCTGGTCTTGAACTGCCTCCTGGCTGAGATCACTGCCATGTGA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060253.5 |
||
| 3UTR-3UTR CCA 90 bp | AACAACCAACCAACCAACCAGAACTCCATATGCTCCAGTCATTCAGCTCCCACAGATGGAATCGAGAGCTaGTGGAGTCATAGGCAGCTG | + |
|
Preference number: 2 (lower is better) Translates to: NNQPTNQNSICSSHSAPTDGIES*WSHRQL Trigger: CAGCTGCCTATGACTCCACCAGCTCTCGATTCCATC...TGTGGGAGCTGAATGACTGGAGCATATGGAGTTCTGGTTGGTTGGTTGGTTGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060253.5 |
||
| 3UTR-3UTR CCA 90 bp | GGGTCAGGACACTCCCTACTTAGAAATACCAGACACTGGTACAGCCATGTGGCATACTGTCTACTCCCGTaGCCTCCAACTTATGATCCT | + |
|
Preference number: 2 (lower is better) Translates to: GSGHSLLRNTRHWYSHVAYCLLP*PPTYDP Trigger: AGGATCATAAGTTGGAGGCCACGGGAGTAGACAGTA...TGCCACATGGCTGTACCAGTGTCTGGTATTTCTAAGTAGGGAGTGTCCTGACCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060253.5 |
||
| 3UTR-3UTR CCA 90 bp | GACTCAAGTGTGTTCAGCATCTACTGTATGCCAAAGATGCCTTCTGTGGTTCCTAGACAGGGCTTGTCCTaGCTGTCCTGGAACTCTCTG | + |
|
Preference number: 2 (lower is better) Translates to: DSSVFSIYCMPKMPSVVPRQGLS*LSWNSL Trigger: CAGAGAGTTCCAGGACAGCCAGGACAAGCCCTGTCT...AGGAACCACAGAAGGCATCTTTGGCATACAGTAGATGCTGAACACACTTGAGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060253.5 |
||
| 3UTR-3UTR CCA 90 bp | TCACATGGCAGTGATCTCAGCCAGGAGGCAGTTCAAGACCAGCTTGGACAACATTCACATACACATTTTTaGGGGGCAGGGTCAAGACAG | + |
|
Preference number: 2 (lower is better) Translates to: SHGSDLSQEAVQDQLGQHSHTHF*GAGSRQ Trigger: CTGTCTTGACCCTGCCCCCCAAAAATGTGTATGTGA...ATGTTGTCCAAGCTGGTCTTGAACTGCCTCCTGGCTGAGATCACTGCCATGTGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000060253.5 |
||
| 3UTR CAA 90 bp | TGTCACATGGCAGTGATCTCAGCCAGGAGGCAGTTCAAGACCAGCTaGGACAACATGAAACTCTGCCTAAAGAGATTAAGAGCAAAGGGC | + |
|
Preference number: 2 (lower is better) Translates to: CHMAVISARRQFKTS*DNMKLCLKRLRAKG Trigger: GCCCTTTGCTCTTAATCTCTTTAGGCAGAGTTTCATGTTGTCCAAGCTGGTCTTGAACTGCCTCCTGGCTGAGATCACTGCCATGTGACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060253.5 |
||
| 3UTR-3UTR GCA 90 bp | CTTATACAGAGAATCTACCTAGCACTGCAATCACACACTGACGGTCCTCAAGGGCTCAGCTGTGGCCACTaGAAAATACTGGCAACTCTC | + |
|
Preference number: 2 (lower is better) Translates to: LIQRIYLALQSHTDGPQGLSCGH*KILATL Trigger: GAGAGTTGCCAGTATTTTGCAGTGGCCACAGCTGAG...CCCTTGAGGACCGTCAGTGTGTGATTGCAGTGCTAGGTAGATTCTCTGTATAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060253.5 |
||
| 3UTR-3UTR CCA 90 bp | GACTCAAGTGTGTTCAGCATCTACTGTATGCCAAAGATGCCTTCTGTGGTTCCTGGGCTATGTTTAACCTaGGGTCAGGACACTCCCTAC | + |
|
Preference number: 2 (lower is better) Translates to: DSSVFSIYCMPKMPSVVPGLCLT*GQDTPY Trigger: GTAGGGAGTGTCCTGACCCCAGGTTAAACATAGCCC...AGGAACCACAGAAGGCATCTTTGGCATACAGTAGATGCTGAACACACTTGAGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060253.5 |
||
| 3UTR-3UTR GCA 90 bp | CTTCTGCAGGTCAGAGTCAATCAAGCTCACTTGGTATTTGTTGCTTGTTTTTGTCCTGGCTGTGGCTCTTaGAACTGGCTCTGGGCTTTC | + |
|
Preference number: 2 (lower is better) Translates to: LLQVRVNQAHLVFVACFCPGCGS*NWLWAF Trigger: GAAAGCCCAGAGCCAGTTGCAAGAGCCACAGCCAGG...ACAAAAACAAGCAACAAATACCAAGTGAGCTTGATTGACTCTGACCTGCAGAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060253.5 |
||
| 3UTR-3UTR GCA 90 bp | GACTCAAGTGTGTTCAGCATCTACTGTATGCCAAAGATGCCTTCTGTGGTTCCTAAAGGGGTTCATGTTTaGCCTGAGCTTTGGCAGGGT | + |
|
Preference number: 2 (lower is better) Translates to: DSSVFSIYCMPKMPSVVPKGVHV*PELWQG Trigger: ACCCTGCCAAAGCTCAGGGCAAACATGAACCCCTTT...AGGAACCACAGAAGGCATCTTTGGCATACAGTAGATGCTGAACACACTTGAGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060253.5 |
||
| 3UTR-3UTR GCA 90 bp | AACAACCAACCAACCAACCAGAACTCCATATGCTCCAGTCATTCAGCTCCCACATTGTTTTTGTCCATCTaGCTCTCGAGCTCAGGGACT | + |
|
Preference number: 2 (lower is better) Translates to: NNQPTNQNSICSSHSAPTLFLSI*LSSSGT Trigger: AGTCCCTGAGCTCGAGAGGCAGATGGACAAAAACAA...TGTGGGAGCTGAATGACTGGAGCATATGGAGTTCTGGTTGGTTGGTTGGTTGTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060253.5 |
||
| 3UTR-3UTR CCA 90 bp | GACTCAAGTGTGTTCAGCATCTACTGTATGCCAAAGATGCCTTCTGTGGTTCCTATCCCCAGAAGTTATTaGGATACCGGGGACTCCTCA | + |
|
Preference number: 2 (lower is better) Translates to: DSSVFSIYCMPKMPSVVPIPRSY*DTGDSS Trigger: TGAGGAGTCCCCGGTATCCCAATAACTTCTGGGGAT...AGGAACCACAGAAGGCATCTTTGGCATACAGTAGATGCTGAACACACTTGAGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060253.5 |
||
| 3UTR-3UTR TCA 90 bp | GACTCAAGTGTGTTCAGCATCTACTGTATGCCAAAGATGCCTTCTGTGGTTCCTAAACATGTCAGCCACTaGGACAGAGGGTTTGAGTCT | + |
|
Preference number: 2 (lower is better) Translates to: DSSVFSIYCMPKMPSVVPKHVSH*DRGFES Trigger: AGACTCAAACCCTCTGTCTCAGTGGCTGACATGTTT...AGGAACCACAGAAGGCATCTTTGGCATACAGTAGATGCTGAACACACTTGAGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060253.5 |
||
| 3UTR-3UTR CCA 90 bp | AACAACCAACCAACCAACCAGAACTCCATATGCTCCAGTCATTCAGCTCCCACACAAAGATGCCTTCTGTaGTTCCTGCTTGTACCTTTG | + |
|
Preference number: 2 (lower is better) Translates to: NNQPTNQNSICSSHSAPTQRCLL*FLLVPL Trigger: CAAAGGTACAAGCAGGAACCACAGAAGGCATCTTTG...TGTGGGAGCTGAATGACTGGAGCATATGGAGTTCTGGTTGGTTGGTTGGTTGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060253.5 |
||
| 3UTR-3UTR CCA 90 bp | AGTCTCCAAGATTATAAGGTGAAACTGAATGTCACTGTTATGCCTGGAGTTGGTTTTATGTGGCTTAAATaGCTGAGGGAGGGACTGGCC | + |
|
Preference number: 2 (lower is better) Translates to: SLQDYKVKLNVTVMPGVGFMWLK*LREGLA Trigger: GGCCAGTCCCTCCCTCAGCCATTTAAGCCACATAAA...ACCAACTCCAGGCATAACAGTGACATTCAGTTTCACCTTATAATCTTGGAGACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060253.5 |
||
| 3UTR CAA 90 bp | GACAGCATGAAGAACATGGGGTTCAAACAATTGTTCCTCTTAAATTaGAGGTCGGAAGTCAGTGGTTATGGAAGGACCCATGAGATATAT | + |
|
Preference number: 2 (lower is better) Translates to: DSMKNMGFKQLFLLN*RSEVSGYGRTHEIY Trigger: ATATATCTCATGGGTCCTTCCATAACCACTGACTTCCGACCTCAAATTTAAGAGGAACAATTGTTTGAACCCCATGTTCTTCATGCTGTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060253.5 |
||
| 3UTR-3UTR GCA 90 bp | AGTTTGCTTATACAGAGAATCTACCTAGCACTGCAATCACACACTGACGGTCCTAAAGGAAAAACCAAATaGAAACATCTAGGTGGTCAG | + |
|
Preference number: 2 (lower is better) Translates to: SLLIQRIYLALQSHTDGPKGKTK*KHLGGQ Trigger: CTGACCACCTAGATGTTTGCATTTGGTTTTTCCTTT...AGGACCGTCAGTGTGTGATTGCAGTGCTAGGTAGATTCTCTGTATAAGCAAACT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060253.5 |
||
| 3UTR CAA 90 bp | AAATTTCCTAATTCTGACAGCATGAAGAACATGGGGTTCAAACAATaGTTCCTCTTAAATTTGAGGTCGGAAGTCAGTGGTTATGGAAGG | + |
|
Preference number: 2 (lower is better) Translates to: KFPNSDSMKNMGFKQ*FLLNLRSEVSGYGR Trigger: CCTTCCATAACCACTGACTTCCGACCTCAAATTTAAGAGGAACAATTGTTTGAACCCCATGTTCTTCATGCTGTCAGAATTAGGAAATTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060253.5 |
||
| 3UTR-3UTR CAA 90 bp | GTGGGCTGGTCAATGCCCACTTGTCAGGCTGGAATGCTGGCCAGCCCCGTGTCCTTCTCCTCTGCAGCCTaGCAAGTGCAGGCCAGACTC | + |
|
Preference number: 3 (lower is better) Translates to: VGWSMPTCQAGMLASPVSFSSAA*QVQARL Trigger: GAGTCTGGCCTGCACTTGCAAGGCTGCAGAGGAGAA...GGACACGGGGCTGGCCAGCATTCCAGCCTGACAAGTGGGCATTGACCAGCCCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060253.5 |
||
| 3UTR GCA 72 bp | GTCCATCCAGAGGGCGGGACAGAAGGCACCAGTGTCTaGCTGGCTGTGGCTCTTGCAACTGGCTCTGGGCTT | + |
|
Preference number: 3 (lower is better) Translates to: VHPEGGTEGTSV*LAVALATGSGL Trigger: AAGCCCAGAGCCAGTTGCAAGAGCCACAGCCAGGCAGACACTGGTGCCTTCTGTCCCGCCCTCTGGATGGAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060253.5 |
||
| 3UTR CCA 72 bp | GAACCTGGTGGCCAGGTGGCCTGGTCACCATCTGCCTaGCAGTTCCAGCTGTGTCCCAAGGTTGGGAACTGT | + |
|
Preference number: 3 (lower is better) Translates to: EPGGQVAWSPSA*QFQLCPKVGNC Trigger: ACAGTTCCCAACCTTGGGACACAGCTGGAACTGCCAGGCAGATGGTGACCAGGCCACCTGGCCACCAGGTTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060253.5 |
||
| 3UTR GCA 72 bp | CAGTGCCCACCACAGGAAGGAGACAGCTTTGCTCACTaGAGGACTCTAGGACAGTGCAGAGGCCTCCAGACC | + |
|
Preference number: 3 (lower is better) Translates to: QCPPQEGDSFAH*RTLGQCRGLQT Trigger: GGTCTGGAGGCCTCTGCACTGTCCTAGAGTCCTGCAGTGAGCAAAGCTGTCTCCTTCCTGTGGTGGGCACTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060253.5 |
||
| 3UTR GCA 72 bp | AGCCTTGCAAGTGCAGGCCAGACTCTGCCCCACACCTaGTGTGCTGTCTTTCATCCTGCTGGGCCCTCTGTA | + |
|
Preference number: 3 (lower is better) Translates to: SLASAGQTLPHT*CAVFHPAGPSV Trigger: TACAGAGGGCCCAGCAGGATGAAAGACAGCACAGCAGGTGTGGGGCAGAGTCTGGCCTGCACTTGCAAGGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060253.5 |
||
| 3UTR GCA 72 bp | ATCTCAAATGTGCAGAGCCAGGCCCACGTTCTCCTCTaGAGCCTTGCAAGTGCAGGCCAGACTCTGCCCCAC | + |
|
Preference number: 3 (lower is better) Translates to: ISNVQSQAHVLL*SLASAGQTLPH Trigger: GTGGGGCAGAGTCTGGCCTGCACTTGCAAGGCTGCAGAGGAGAACGTGGGCCTGGCTCTGCACATTTGAGAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060253.5 |
||
| 3UTR GCA 72 bp | ATGTGGGCTGGTCAATGCCCACTTGTCAGGCTGGAATaGTGGCCAGCCCCGTGTCCACTGCTCTGTAGCTCT | + |
|
Preference number: 3 (lower is better) Translates to: MWAGQCPLVRLE*WPAPCPLLCSS Trigger: AGAGCTACAGAGCAGTGGACACGGGGCTGGCCAGCATTCCAGCCTGACAAGTGGGCATTGACCAGCCCACAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060253.5 |
||
| 3UTR GCA 72 bp | CACCATGGGCAGCAGCCTGAGCTCATGAGCACTCCCTaGCTGTCTGGTGAGAATTCCAGCCCTGGGACAAAG | + |
|
Preference number: 3 (lower is better) Translates to: HHGQQPELMSTP*LSGENSSPGTK Trigger: CTTTGTCCCAGGGCTGGAATTCTCACCAGACAGGCAGGGAGTGCTCATGAGCTCAGGCTGCTGCCCATGGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060253.5 |
||
| 3UTR CCA 72 bp | CCCCAGGGGTTCTCAGATCCTTCACCAGATGTGGGCTaGTCAATGCCCACTTGTCAGGCTGGAATGCTGGCC | + |
|
Preference number: 3 (lower is better) Translates to: PQGFSDPSPDVG*SMPTCQAGMLA Trigger: GGCCAGCATTCCAGCCTGACAAGTGGGCATTGACCAGCCCACATCTGGTGAAGGATCTGAGAACCCCTGGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060253.5 |
||
| 3UTR-3UTR CAA 90 bp | CTCTGTAGACCAGGCTGGCCTAGAACTTATAGAGACCCACCTGCCTCTGCCCGATGCCACCACGCATGCTaGACAGGCACTCACCTGGCT | + |
|
Preference number: 3 (lower is better) Translates to: LCRPGWPRTYRDPPASARCHHAC*TGTHLA Trigger: AGCCAGGTGAGTGCCTGTCAAGCATGCGTGGTGGCA...TCGGGCAGAGGCAGGTGGGTCTCTATAAGTTCTAGGCCAGCCTGGTCTACAGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060253.5 |
||
| 3UTR TCA 72 bp | GTGCTAAGATGTTGGGTGTGTGCCACCACGCATGCTTaGCAGGCACTCACCTGGCTCCCGCTCTACCTAGCT | + |
|
Preference number: 3 (lower is better) Translates to: VLRCWVCATTHA*QALTWLPLYLA Trigger: AGCTAGGTAGAGCGGGAGCCAGGTGAGTGCCTGTCAAGCATGCGTGGTGGCACACACCCAACATCTTAGCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060253.5 |
||
| 3UTR GCA 72 bp | AGGTGGTCAGTGCCCACCACAGGAAGGAGACAGCTTTaGTCACTGCAGGACTCTAGGACAGTGCAGAGGCCT | + |
|
Preference number: 3 (lower is better) Translates to: RWSVPTTGRRQL*SLQDSRTVQRP Trigger: AGGCCTCTGCACTGTCCTAGAGTCCTGCAGTGAGCAAAGCTGTCTCCTTCCTGTGGTGGGCACTGACCACCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060253.5 |
||
| 3UTR GCA 72 bp | GGAAGTGCTAAGATGTTGGGTGTGTGCCACCACGCATaGTTGACAGGCACTCACCTGGCTCCCGCTCTACCT | + |
|
Preference number: 3 (lower is better) Translates to: GSAKMLGVCHHA*LTGTHLAPALP Trigger: AGGTAGAGCGGGAGCCAGGTGAGTGCCTGTCAAGCATGCGTGGTGGCACACACCCAACATCTTAGCACTTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060253.5 |
||
| 3UTR GCA 72 bp | TGCAAGTGCAGGCCAGACTCTGCCCCACACCTGCTGTaGTGTCTTTCATCCTGCTGGGCCCTCTGTAGATCT | + |
|
Preference number: 3 (lower is better) Translates to: CKCRPDSAPHLL*CLSSCWALCRS Trigger: AGATCTACAGAGGGCCCAGCAGGATGAAAGACAGCACAGCAGGTGTGGGGCAGAGTCTGGCCTGCACTTGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060253.5 |
||
| 3UTR CCA 72 bp | ACCATCTGCCTGGCAGTTCCAGCTGTGTCCCAAGGTTaGGAACTGTCTGTCCATCCAGAGGGCGGGACAGAA | + |
|
Preference number: 3 (lower is better) Translates to: TICLAVPAVSQG*ELSVHPEGGTE Trigger: TTCTGTCCCGCCCTCTGGATGGACAGACAGTTCCCAACCTTGGGACACAGCTGGAACTGCCAGGCAGATGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060253.5 |
||
| 3UTR CCA 72 bp | CCAAGACTCAAAGGGGTTCATGTTTGCCCTGAGCTTTaGCAGGGTGGAGCAGCGAGACCCTGCCCAGTAAGG | + |
|
Preference number: 3 (lower is better) Translates to: PRLKGVHVCPEL*QGGAARPCPVR Trigger: CCTTACTGGGCAGGGTCTCGCTGCTCCACCCTGCCAAAGCTCAGGGCAAACATGAACCCCTTTGAGTCTTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060253.5 |
||
| 3UTR TCA 72 bp | GATGAAGGTGACAGTGTGACAAGTGTGGCACAGATGTaGACCTGGTGGCCAGGTGGCCTGGTCACCATCTGC | + |
|
Preference number: 3 (lower is better) Translates to: DEGDSVTSVAQM*TWWPGGLVTIC Trigger: GCAGATGGTGACCAGGCCACCTGGCCACCAGGTTCACATCTGTGCCACACTTGTCACACTGTCACCTTCATC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060253.5 |
||
| 3UTR TCA 72 bp | GAGTTCAACCTGGGCTTCGTGCCGATCATGACATGTTaGGGGGTGTGGGAAGTGCTGGGGGATGCCAAGGTA | + |
|
Preference number: 3 (lower is better) Translates to: EFNLGFVPIMTC*GVWEVLGDAKV Trigger: TACCTTGGCATCCCCCAGCACTTCCCACACCCCTCAACATGTCATGATCGGCACGAAGCCCAGGTTGAACTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000060253.5 |
||
| 3UTR GCA 72 bp | TGTAGCTGGCTTCTACGGCCGGGGATGAGTACCTCCTaGTTTGGCCTAATCCAGGGTGAACCACTCACCACA | + |
|
Preference number: 3 (lower is better) Translates to: CSWLLRPGMSTS*FGLIQGEPLTT Trigger: TGTGGTGAGTGGTTCACCCTGGATTAGGCCAAAGCAGGAGGTACTCATCCCCGGCCGTAGAAGCCAGCTACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060253.5 |
||
| 3UTR CCA 72 bp | TCTTGCCCCAGGGGTTCTCAGATCCTTCACCAGATGTaGGCTGGTCAATGCCCACTTGTCAGGCTGGAATGC | + |
|
Preference number: 3 (lower is better) Translates to: SCPRGSQILHQM*AGQCPLVRLEC Trigger: GCATTCCAGCCTGACAAGTGGGCATTGACCAGCCCACATCTGGTGAAGGATCTGAGAACCCCTGGGGCAAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060253.5 |
||
| 3UTR-3UTR CAA 90 bp | CCCCTAGGGTGGCATCTCAAATGTGCAGAGCCAGGCCCACGTTCTCCTCTGCAGGCAGGAATCTGTTCTTaGATCCTGCTGTTCCACCTA | + |
|
Preference number: 3 (lower is better) Translates to: PLGWHLKCAEPGPRSPLQAGICS*ILLFHL Trigger: TAGGTGGAACAGCAGGATCAAAGAACAGATTCCTGC...CTGCAGAGGAGAACGTGGGCCTGGCTCTGCACATTTGAGATGCCACCCTAGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060253.5 |
||
| 3UTR CCA 72 bp | CAGCAGTTAGCCCAGATTCCCAGAACCCACATCAGGTaGCTCACGTCCACTATAACTCCAGCTCCAGGGAGA | + |
|
Preference number: 3 (lower is better) Translates to: QQLAQIPRTHIR*LTSTITPAPGR Trigger: TCTCCCTGGAGCTGGAGTTATAGTGGACGTGAGCCACCTGATGTGGGTTCTGGGAATCTGGGCTAACTGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060253.5 |
||
| 3UTR TCA 72 bp | TGTCTTTCATCCTGCTGGGCCCTCTGTAGATCTGACTaGGTGCCAAGTGAGGTGGTTCTGTGCTGGGCTATG | + |
|
Preference number: 3 (lower is better) Translates to: CLSSCWALCRSD*VPSEVVLCWAM Trigger: CATAGCCCAGCACAGAACCACCTCACTTGGCACTCAGTCAGATCTACAGAGGGCCCAGCAGGATGAAAGACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060253.5 |
||
| 3UTR GCA 72 bp | GGTGAAACTGAATGTCACTGTTATGCCTGGAGTTGGTaGCCAAAGAGGGTAGTCTCCTGCCAGATGCCAGGG | + |
|
Preference number: 3 (lower is better) Translates to: GETECHCYAWSW*PKRVVSCQMPG Trigger: CCCTGGCATCTGGCAGGAGACTACCCTCTTTGGGCACCAACTCCAGGCATAACAGTGACATTCAGTTTCACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060253.5 |
||
| 3UTR CCA 72 bp | TGTTCTTTGATCCTGCTGTTCCACCTAGGAAGAACCTaGCTGGAGGCAGCCTCTGGGACCCGCTGTATTAAC | + |
|
Preference number: 3 (lower is better) Translates to: CSLILLFHLGRT*LEAASGTRCIN Trigger: GTTAATACAGCGGGTCCCAGAGGCTGCCTCCAGCCAGGTTCTTCCTAGGTGGAACAGCAGGATCAAAGAACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060253.5 |
||
| 3UTR-3UTR CAA 90 bp | CAGTTTATGTGGCTTAAATGGCTGAGGGAGGGACTGGCCCCTCTACACATGACTCATCCCCAGAAGTTATaGGGATACCGGGGACTCCTC | + |
|
Preference number: 3 (lower is better) Translates to: QFMWLKWLREGLAPLHMTHPQKL*GYRGLL Trigger: GAGGAGTCCCCGGTATCCCAATAACTTCTGGGGATG...AGTCATGTGTAGAGGGGCCAGTCCCTCCCTCAGCCATTTAAGCCACATAAACTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000060253.5 |
||
| 3UTR-3UTR CAA 90 bp | GTGCCAAGTGAGGTGGTTCTGTGCTGGGCTATGTTTAACCTGGGGTCAGGACACACCCCCAGGCTATTCTaGAACTTACTGTCTACTCCC | + |
|
Preference number: 3 (lower is better) Translates to: VPSEVVLCWAMFNLGSGHTPRLF*NLLSTP Trigger: GGGAGTAGACAGTAAGTTCAAGAATAGCCTGGGGGT...GTGTCCTGACCCCAGGTTAAACATAGCCCAGCACAGAACCACCTCACTTGGCAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060253.5 |
||
| 3UTR TCA 72 bp | CTTGTTTTTGTCCATCTGCCTCTCGAGCTCAGGGACTaGCGGTGTGTGACAGACAGCACATCTGGTTCAAGC | + |
|
Preference number: 3 (lower is better) Translates to: LVFVHLPLELRD*RCVTDSTSGSS Trigger: GCTTGAACCAGATGTGCTGTCTGTCACACACCGTCAGTCCCTGAGCTCGAGAGGCAGATGGACAAAAACAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060253.5 |
||
| 3UTR-3UTR CAA 90 bp | CATCTCAAATGTGCAGAGCCAGGCCCACGTTCTCCTCTGCAGCCTTGCAAGTGCTTGTTCCTCTTAAATTaGAGGTCGGAAGTCAGTGGT | + |
|
Preference number: 3 (lower is better) Translates to: HLKCAEPGPRSPLQPCKCLFLLN*RSEVSG Trigger: ACCACTGACTTCCGACCTCAAATTTAAGAGGAACAA...GCACTTGCAAGGCTGCAGAGGAGAACGTGGGCCTGGCTCTGCACATTTGAGATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060253.5 |
||
| 3UTR TCA 72 bp | TTGAACTTACTGTCTACTCCCGTGGCCTCCAACTTATaGTCCTCCTGCCTCAGCCCTGGAAGTGCTAAGATG | + |
|
Preference number: 3 (lower is better) Translates to: LNLLSTPVASNL*SSCLSPGSAKM Trigger: CATCTTAGCACTTCCAGGGCTGAGGCAGGAGGATCATAAGTTGGAGGCCACGGGAGTAGACAGTAAGTTCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060253.5 |
||
| 3UTR GCA 72 bp | TTTCATCCTGCTGGGCCCTCTGTAGATCTGACTGAGTaGCAAGTGAGGTGGTTCTGTGCTGGGCTATGTTTA | + |
|
Preference number: 3 (lower is better) Translates to: FHPAGPSVDLTE*QVRWFCAGLCL Trigger: TAAACATAGCCCAGCACAGAACCACCTCACTTGGCACTCAGTCAGATCTACAGAGGGCCCAGCAGGATGAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060253.5 |
||
| 3UTR CCA 72 bp | TCTGAACTTGCTCCACCTGAGATACCTGAATGGTACTaGTTCCATCAGAAGGCAGCTGCTGTGAACCAGGTG | + |
|
Preference number: 3 (lower is better) Translates to: SELAPPEIPEWY*FHQKAAAVNQV Trigger: CACCTGGTTCACAGCAGCTGCCTTCTGATGGAACCAGTACCATTCAGGTATCTCAGGTGGAGCAAGTTCAGA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060253.5 |
||
| 3UTR-3UTR CAA 90 bp | GACTCAAGTGTGTTCAGCATCTACTGTATGCCAAAGATGCCTTCTGTGGTTCCTAGCTGTGTCCCAAGGTaGGGAACTGTCTGTCCATCC | + |
|
Preference number: 3 (lower is better) Translates to: DSSVFSIYCMPKMPSVVPSCVPR*GTVCPS Trigger: GGATGGACAGACAGTTCCCAACCTTGGGACACAGCT...AGGAACCACAGAAGGCATCTTTGGCATACAGTAGATGCTGAACACACTTGAGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060253.5 |
||
| 3UTR CCA 72 bp | CCCTACTTAGAAATACCAGACACTGGTACAGCCATGTaGCACCACAGGAACGGGCTGTGCTATCTACATGAA | + |
|
Preference number: 3 (lower is better) Translates to: PYLEIPDTGTAM*HHRNGLCYLHE Trigger: TTCATGTAGATAGCACAGCCCGTTCCTGTGGTGCCACATGGCTGTACCAGTGTCTGGTATTTCTAAGTAGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060253.5 |
||
| 3UTR CCA 72 bp | CAAGTGAGGTGGTTCTGTGCTGGGCTATGTTTAACCTaGGGTCAGGACACTCCCTACTTAGAAATACCAGAC | + |
|
Preference number: 3 (lower is better) Translates to: QVRWFCAGLCLT*GQDTPYLEIPD Trigger: GTCTGGTATTTCTAAGTAGGGAGTGTCCTGACCCCAGGTTAAACATAGCCCAGCACAGAACCACCTCACTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060253.5 |
||
| 3UTR CCA 72 bp | CAGATCTGCACACACAGTTCATGCTGTTCTCAGCTGTaGCCACTGCAAAATACTGGCAACTCTCAACTCAGT | + |
|
Preference number: 3 (lower is better) Translates to: QICTHSSCCSQL*PLQNTGNSQLS Trigger: ACTGAGTTGAGAGTTGCCAGTATTTTGCAGTGGCCACAGCTGAGAACAGCATGAACTGTGTGTGCAGATCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060253.5 |
||
| 3UTR-3UTR CAA 90 bp | AACAACCAACCAACCAACCAGAACTCCATATGCTCCAGTCATTCAGCTCCCACAAGACTCCACTCTCAGTaGATCCAAGATTCAAGGTCA | + |
|
Preference number: 3 (lower is better) Translates to: NNQPTNQNSICSSHSAPTRLHSQ*IQDSRS Trigger: TGACCTTGAATCTTGGATCAACTGAGAGTGGAGTCT...TGTGGGAGCTGAATGACTGGAGCATATGGAGTTCTGGTTGGTTGGTTGGTTGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060253.5 |
||
| 3UTR TCA 72 bp | GCTGTCAGACATGAAACCCCAGACTCCACTCTCAGTTaGTCCAAGATTCAAGGTCAACTTCAGCTACAGCTA | + |
|
Preference number: 3 (lower is better) Translates to: AVRHETPDSTLS*SKIQGQLQLQL Trigger: TAGCTGTAGCTGAAGTTGACCTTGAATCTTGGATCAACTGAGAGTGGAGTCTGGGGTTTCATGTCTGACAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060253.5 |
||
| 3UTR GCA 72 bp | GCACACACAGTTCATGCTGTTCTCAGCTGTGGCCACTaGAAAATACTGGCAACTCTCAACTCAGTCATTACT | + |
|
Preference number: 3 (lower is better) Translates to: AHTVHAVLSCGH*KILATLNSVIT Trigger: AGTAATGACTGAGTTGAGAGTTGCCAGTATTTTGCAGTGGCCACAGCTGAGAACAGCATGAACTGTGTGTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060253.5 |
||
| 3UTR GCA 72 bp | CATCTACTGTATGCCAAAGATGCCTTCTGTGGTTCCTaGTTGTACCTTTGTGAGCTCAGAGCTTTACTCACC | + |
|
Preference number: 3 (lower is better) Translates to: HLLYAKDAFCGS*LYLCELRALLT Trigger: GGTGAGTAAAGCTCTGAGCTCACAAAGGTACAAGCAGGAACCACAGAAGGCATCTTTGGCATACAGTAGATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060253.5 |
||
| 3UTR GCA 72 bp | TCTTCACATACCTGCATTTTAATCCATAAATATCAGTaGCAAGACTCAAAGGGGTTCATGTTTGCCCTGAGC | + |
|
Preference number: 3 (lower is better) Translates to: SSHTCILIHKYQ*QDSKGFMFALS Trigger: GCTCAGGGCAAACATGAACCCCTTTGAGTCTTGGCACTGATATTTATGGATTAAAATGCAGGTATGTGAAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060253.5 |
||
| 3UTR-3UTR CAA 90 bp | AGTCTCCAAGATTATAAGGTGAAACTGAATGTCACTGTTATGCCTGGAGTTGGTAGTCTCATAATTTTATaGCTGGTGATCCAGCCTCAC | + |
|
Preference number: 3 (lower is better) Translates to: SLQDYKVKLNVTVMPGVGSLIIL*LVIQPH Trigger: GTGAGGCTGGATCACCAGCAATAAAATTATGAGACT...ACCAACTCCAGGCATAACAGTGACATTCAGTTTCACCTTATAATCTTGGAGACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060253.5 |
||
| 3UTR-3UTR CAA 90 bp | AGTCTCCAAGATTATAAGGTGAAACTGAATGTCACTGTTATGCCTGGAGTTGGTGTTCAAGCTTGCTTCTaGACAGGATTTAACAAGTCA | + |
|
Preference number: 3 (lower is better) Translates to: SLQDYKVKLNVTVMPGVGVQACF*TGFNKS Trigger: TGACTTGTTAAATCCTGTCAAGAAGCAAGCTTGAAC...ACCAACTCCAGGCATAACAGTGACATTCAGTTTCACCTTATAATCTTGGAGACT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060253.5 |
||
| CDS-3UTR CCA 90 bp | AGGCCTCCAGACCCAGACAGAAGCATGCCACTGGGGAGGCTCAGGCATCCGGGTTCTGGGGTGGAGCAGTaGTTTCCTGCCACCTGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: RPPDPDRSMPLGRLRHPGSGVEQ*FPATWE Trigger: CTCCCAGGTGGCAGGAAACCACTGCTCCACCCCAGA...ACCCGGATGCCTGAGCCTCCCCAGTGGCATGCTTCTGTCTGGGTCTGGAGGCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060253.5 |
||
| CDS-3UTR TCA 90 bp | GAGTGCCAAGTGAGGTGGTTCTGTGCTGGGCTATGTTTAACCTGGGGTCAGGACTGTTGGTGTGCCCGGTaGCGCTGGCGGCCAGCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: ECQVRWFCAGLCLTWGQDCWCAR*RWRPAA Trigger: CGCTGCTGGCCGCCAGCGTCACCGGGCACACCAACA...GTCCTGACCCCAGGTTAAACATAGCCCAGCACAGAACCACCTCACTTGGCACTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060253.5 |
||
| CDS-3UTR CCA 90 bp | CATGTGACCCTGAAGGCTTCTAGAATCAGCAGCTGGGTTCACTCCAGCAGGCCATGCCCAGGTTGCCCTTaGCCGAGCGGTCCTGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: HVTLKASRISSWVHSSRPCPGCP*PSGPAA Trigger: TGCTGCAGGACCGCTCGGCCAAGGGCAACCTGGGCA...TGGCCTGCTGGAGTGAACCCAGCTGCTGATTCTAGAAGCCTTCAGGGTCACATG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060253.5 |
||
| 3UTR CAA 72 bp | CACCATCTGCCTGGCAGTTCCAGCTGTGTCCCAAGGTaGGGAACTGTCTGTCCATCCAGAGGGCGGGACAGA | + |
|
Preference number: 4 (lower is better) Translates to: HHLPGSSSCVPR*GTVCPSRGRDR Trigger: TCTGTCCCGCCCTCTGGATGGACAGACAGTTCCCAACCTTGGGACACAGCTGGAACTGCCAGGCAGATGGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060253.5 |
||
| CDS-3UTR GCA 90 bp | GCCAGGAGGCAGTTCAAGACCAGCTTGGACAACATGAAACTCTGCCTAAAGAGACCGGCCAGCAGCTTCTaGAGCAGCGGCAGCTTGCCG | + |
|
Preference number: 4 (lower is better) Translates to: ARRQFKTSLDNMKLCLKRPASSF*SSGSLP Trigger: CGGCAAGCTGCCGCTGCTGCAGAAGCTGCTGGCCGG...TCTCTTTAGGCAGAGTTTCATGTTGTCCAAGCTGGTCTTGAACTGCCTCCTGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060253.5 |
||
| CDS-3UTR GCA 90 bp | CAGTTTATGTGGCTTAAATGGCTGAGGGAGGGACTGGCCCCTCTACACATGACTCCAGCAGCGGGGTCATaGCATAGCCGTCGCGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: QFMWLKWLREGLAPLHMTPAAGS*HSRRAP Trigger: TGGAGCGCGACGGCTATGGCATGACCCCGCTGCTGG...AGTCATGTGTAGAGGGGCCAGTCCCTCCCTCAGCCATTTAAGCCACATAAACTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060253.5 |
||
| 3UTR CAA 72 bp | AGTGCTAAGATGTTGGGTGTGTGCCACCACGCATGCTaGACAGGCACTCACCTGGCTCCCGCTCTACCTAGC | + |
|
Preference number: 4 (lower is better) Translates to: SAKMLGVCHHAC*TGTHLAPALPS Trigger: GCTAGGTAGAGCGGGAGCCAGGTGAGTGCCTGTCAAGCATGCGTGGTGGCACACACCCAACATCTTAGCACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060253.5 |
||
| CDS-3UTR GCA 90 bp | TCACATGGCAGTGATCTCAGCCAGGAGGCAGTTCAAGACCAGCTTGGACAACATGGAGCAGTGGTTTCCTaGCACCTGGGAGGAGCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SHGSDLSQEAVQDQLGQHGAVVS*HLGGAF Trigger: GAAGGCTCCTCCCAGGTGGCAGGAAACCACTGCTCC...ATGTTGTCCAAGCTGGTCTTGAACTGCCTCCTGGCTGAGATCACTGCCATGTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060253.5 |
||
| CDS-3UTR CCA 90 bp | CTTATACAGAGAATCTACCTAGCACTGCAATCACACACTGACGGTCCTCAAGGGCCTGAGAGCTGCTCGTaGCCCGGCTGTTCCTGGATG | + |
|
Preference number: 4 (lower is better) Translates to: LIQRIYLALQSHTDGPQGPESCS*PGCSWM Trigger: CATCCAGGAACAGCCGGGCCACGAGCAGCTCTCAGG...CCCTTGAGGACCGTCAGTGTGTGATTGCAGTGCTAGGTAGATTCTCTGTATAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060253.5 |
||
| 3UTR CAA 72 bp | AGCTGGTGGAGTCATAGGCAGCTGTTCAGTAACTTTTaGTGGTTCTGGGGCTGCACACAGGGTCTCACGTGG | + |
|
Preference number: 4 (lower is better) Translates to: SWWSHRQLFSNF*WFWGCTQGLTW Trigger: CCACGTGAGACCCTGTGTGCAGCCCCAGAACCACAAAAAGTTACTGAACAGCTGCCTATGACTCCACCAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060253.5 |
||
| 3UTR CAA 72 bp | AGCATAGAGTTAAGGCTGGGTGGGCCCTGTGGTGGCTaGGCAGGAATCTGTTCTTTGATCCTGCTGTTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: SIELRLGGPCGG*AGICSLILLFH Trigger: GTGGAACAGCAGGATCAAAGAACAGATTCCTGCCAAGCCACCACAGGGCCCACCCAGCCTTAACTCTATGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060253.5 |
||
| CDS-3UTR GCA 90 bp | AAATGCAAACATCTAGGTGGTCAGTGCCCACCACAGGAAGGAGACAGCTTTGCTCAAAGCTTCCACAGCTaGTTCCCGGCTGGTAGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: KCKHLGGQCPPQEGDSFAQSFHS*FPAGRA Trigger: TGCCCTACCAGCCGGGAAGCAGCTGTGGAAGCTTTG...AGCAAAGCTGTCTCCTTCCTGTGGTGGGCACTGACCACCTAGATGTTTGCATTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060253.5 |
||
| CDS-3UTR GCA 90 bp | GGGTCAGGACACTCCCTACTTAGAAATACCAGACACTGGTACAGCCATGTGGCAATCGCCCTTCTCCAGTaGTTCAGGGCTCCAAGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: GSGHSLLRNTRHWYSHVAIALLQ*FRAPSR Trigger: TCTGCTTGGAGCCCTGAAGCACTGGAGAAGGGCGAT...TGCCACATGGCTGTACCAGTGTCTGGTATTTCTAAGTAGGGAGTGTCCTGACCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060253.5 |
||
| CDS-3UTR CCA 90 bp | CAGTTTATGTGGCTTAAATGGCTGAGGGAGGGACTGGCCCCTCTACACATGACTTCTTATCCACGTAGGTaGCACCCAGCAGCTCCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: QFMWLKWLREGLAPLHMTSYPRR*HPAAPK Trigger: CTTTGGAGCTGCTGGGTGCCACCTACGTGGATAAGA...AGTCATGTGTAGAGGGGCCAGTCCCTCCCTCAGCCATTTAAGCCACATAAACTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060253.5 |
||
| CDS-3UTR GCA 90 bp | CTTCTGCAGGTCAGAGTCAATCAAGCTCACTTGGTATTTGTTGCTTGTTTTTGTGGCAGCTTGCCGTCGTaGGCCGCATTGTACACCGCT | + |
|
Preference number: 4 (lower is better) Translates to: LLQVRVNQAHLVFVACFCGSLPS*AALYTA Trigger: AGCGGTGTACAATGCGGCGCACGACGGCAAGCTGCC...ACAAAAACAAGCAACAAATACCAAGTGAGCTTGATTGACTCTGACCTGCAGAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060253.5 |
||
| CDS-3UTR GCA 90 bp | GGCATCTCAAATGTGCAGAGCCAGGCCCACGTTCTCCTCTGCAGCCTTGCAAGTTCCAAGTTGTTTTGTTaGATGTCCAAGGCATACTTC | + |
|
Preference number: 4 (lower is better) Translates to: GISNVQSQAHVLLCSLASSKLFC*MSKAYF Trigger: GAAGTATGCCTTGGACATGCAACAAAACAACTTGGA...ACTTGCAAGGCTGCAGAGGAGAACGTGGGCCTGGCTCTGCACATTTGAGATGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060253.5 |
||
| CDS-3UTR CCA 90 bp | CTGTTCTCAGCTGTGGCCACTGCAAAATACTGGCAACTCTCAACTCAGTCATTAAGGGCTTCCAACTCTTaGGGTGTAGTCACCTCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: LFSAVATAKYWQLSTQSLRASNS*GVVTSL Trigger: CAGGGAGGTGACTACACCCCAAGAGTTGGAAGCCCT...TAATGACTGAGTTGAGAGTTGCCAGTATTTTGCAGTGGCCACAGCTGAGAACAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060253.5 |
||
| 3UTR CAA 72 bp | CTAATCAGCACAGAACTGAGGAGGCTTCCCAGGATCTaGGTCACAGATCTGCACACACAGTTCATGCTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: LISTELRRLPRI*VTDLHTQFMLF Trigger: GAACAGCATGAACTGTGTGTGCAGATCTGTGACCAAGATCCTGGGAAGCCTCCTCAGTTCTGTGCTGATTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060253.5 |
||
| CDS-3UTR CCA 90 bp | AGTTTGCTTATACAGAGAATCTACCTAGCACTGCAATCACACACTGACGGTCCTCGGTTCTGCTTCTTCTaGGGTGGAGCAGTGGTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: SLLIQRIYLALQSHTDGPRFCFF*GGAVVS Trigger: GGAAACCACTGCTCCACCCCAGAAGAAGCAGAACCG...AGGACCGTCAGTGTGTGATTGCAGTGCTAGGTAGATTCTCTGTATAAGCAAACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060253.5 |
||
| 3UTR CAA 72 bp | AGTCAATCAAGCTCACTTGGTATTTGTTGCTTGTTTTaGTCCATCTGCCTCTCGAGCTCAGGGACTGACGGT | + |
|
Preference number: 4 (lower is better) Translates to: SQSSSLGICCLF*SICLSSSGTDG Trigger: ACCGTCAGTCCCTGAGCTCGAGAGGCAGATGGACAAAAACAAGCAACAAATACCAAGTGAGCTTGATTGACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060253.5 |
||
| 3UTR CAA 72 bp | TGCAGGTCAGAGTCAATCAAGCTCACTTGGTATTTGTaGCTTGTTTTTGTCCATCTGCCTCTCGAGCTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: CRSESIKLTWYL*LVFVHLPLELR Trigger: CCTGAGCTCGAGAGGCAGATGGACAAAAACAAGCAACAAATACCAAGTGAGCTTGATTGACTCTGACCTGCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060253.5 |
||
| 3UTR CAA 72 bp | GCAGTGATCTCAGCCAGGAGGCAGTTCAAGACCAGCTaGGACAACATGAAACTCTGCCTAAAGAGATTAAGA | + |
|
Preference number: 4 (lower is better) Translates to: AVISARRQFKTS*DNMKLCLKRLR Trigger: TCTTAATCTCTTTAGGCAGAGTTTCATGTTGTCCAAGCTGGTCTTGAACTGCCTCCTGGCTGAGATCACTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060253.5 |
||
| CDS-3UTR GCA 90 bp | CTTCTGCAGGTCAGAGTCAATCAAGCTCACTTGGTATTTGTTGCTTGTTTTTGTGTAGGATCTCCAGGCTaGCAGATTCTGCACAGTCGT | + |
|
Preference number: 4 (lower is better) Translates to: LLQVRVNQAHLVFVACFCVGSPG*QILHSR Trigger: ACGACTGTGCAGAATCTGGCAGCCTGGAGATCCTAC...ACAAAAACAAGCAACAAATACCAAGTGAGCTTGATTGACTCTGACCTGCAGAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060253.5 |
||
| 3UTR CAA 72 bp | GTGGATCTAAACATGTCAGCCACTGAGACAGAGGGTTaGAGTCTGATATTTTCTCATGTGCTCTGTGTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: VDLNMSATETEG*SLIFSHVLCVP Trigger: AGGGACACAGAGCACATGAGAAAATATCAGACTCAAACCCTCTGTCTCAGTGGCTGACATGTTTAGATCCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060253.5 |
||
| 3UTR CAA 72 bp | AAGAACATGGGGTTCAAACAATTGTTCCTCTTAAATTaGAGGTCGGAAGTCAGTGGTTATGGAAGGACCCAT | + |
|
Preference number: 4 (lower is better) Translates to: KNMGFKQLFLLN*RSEVSGYGRTH Trigger: ATGGGTCCTTCCATAACCACTGACTTCCGACCTCAAATTTAAGAGGAACAATTGTTTGAACCCCATGTTCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060253.5 |
||
| 3UTR CAA 72 bp | AATTCTGACAGCATGAAGAACATGGGGTTCAAACAATaGTTCCTCTTAAATTTGAGGTCGGAAGTCAGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: NSDSMKNMGFKQ*FLLNLRSEVSG Trigger: ACCACTGACTTCCGACCTCAAATTTAAGAGGAACAATTGTTTGAACCCCATGTTCTTCATGCTGTCAGAATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060253.5 |
||
| CDS-3UTR CAA 90 bp | GTGGGCTGGTCAATGCCCACTTGTCAGGCTGGAATGCTGGCCAGCCCCGTGTCCATAGGCCAGAACCAGTaGCTGGGGCTCCGGCTTAGG | + |
|
Preference number: 5 (lower is better) Translates to: VGWSMPTCQAGMLASPVSIGQNQ*LGLRLR Trigger: CCTAAGCCGGAGCCCCAGCAACTGGTTCTGGCCTAT...GGACACGGGGCTGGCCAGCATTCCAGCCTGACAAGTGGGCATTGACCAGCCCAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060253.5 |
||
| CDS CCA 90 bp | TACGGTTCTGCTTCTTCTGGGGTGGAGCAGTGGTTTCCTGCCACCTaGGAGGAGCCTTCCCCGGGAAGCTCTGTCCCTGAGAGCTGCTCG | + |
|
Preference number: 5 (lower is better) Translates to: YGSASSGVEQWFPAT*EEPSPGSSVPESCS Trigger: CGAGCAGCTCTCAGGGACAGAGCTTCCCGGGGAAGGCTCCTCCCAGGTGGCAGGAAACCACTGCTCCACCCCAGAAGAAGCAGAACCGTA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060253.5 |
||
| CDS CCA 90 bp | GGGCAGCAGCTCTCATACGGTTCTGCTTCTTCTGGGGTGGAGCAGTaGTTTCCTGCCACCTGGGAGGAGCCTTCCCCGGGAAGCTCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: GQQLSYGSASSGVEQ*FPATWEEPSPGSSV Trigger: GACAGAGCTTCCCGGGGAAGGCTCCTCCCAGGTGGCAGGAAACCACTGCTCCACCCCAGAAGAAGCAGAACCGTATGAGAGCTGCTGCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060253.5 |
||
| CDS-3UTR CAA 90 bp | CTCTGTAGACCAGGCTGGCCTAGAACTTATAGAGACCCACCTGCCTCTGCCCGAAGCTGCATGCCCAGGTaGCCCTTGGCCGAGCGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: LCRPGWPRTYRDPPASARSCMPR*PLAERS Trigger: GGACCGCTCGGCCAAGGGCAACCTGGGCATGCAGCT...TCGGGCAGAGGCAGGTGGGTCTCTATAAGTTCTAGGCCAGCCTGGTCTACAGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060253.5 |
||
| CDS-3UTR CAA 90 bp | GAGTGCCAAGTGAGGTGGTTCTGTGCTGGGCTATGTTTAACCTGGGGTCAGGACATGCCCAGGTTGCCCTaGGCCGAGCGGTCCTGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: ECQVRWFCAGLCLTWGQDMPRLP*AERSCS Trigger: GCTGCAGGACCGCTCGGCCAAGGGCAACCTGGGCAT...GTCCTGACCCCAGGTTAAACATAGCCCAGCACAGAACCACCTCACTTGGCACTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060253.5 |
||
| CDS-3UTR CAA 90 bp | GAGTGCCAAGTGAGGTGGTTCTGTGCTGGGCTATGTTTAACCTGGGGTCAGGACCCGTCGTGCGCCGCATaGTACACCGCTGTGTGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: ECQVRWFCAGLCLTWGQDPSCAA*YTAVCR Trigger: TCTGCACACAGCGGTGTACAATGCGGCGCACGACGG...GTCCTGACCCCAGGTTAAACATAGCCCAGCACAGAACCACCTCACTTGGCACTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060253.5 |
||
| CDS-3UTR CAA 90 bp | GCTCAGCAGTTAGCCCAGATTCCCAGAACCCACATCAGGTGGCTCACGTCCACTACTTCCCGAACCCCTTaGCTGAGCACACCCATGAGG | + |
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Preference number: 5 (lower is better) Translates to: AQQLAQIPRTHIRWLTSTTSRTP*LSTPMR Trigger: CCTCATGGGTGTGCTCAGCAAAGGGGTTCGGGAAGT...AGTGGACGTGAGCCACCTGATGTGGGTTCTGGGAATCTGGGCTAACTGCTGAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060253.5 |
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| CDS-3UTR CAA 90 bp | AACAACCAACCAACCAACCAGAACTCCATATGCTCCAGTCATTCAGCTCCCACAGAGTCACCCGGTTCCTaGGGCAACTGCAGAGCCCGC | + |
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Preference number: 5 (lower is better) Translates to: NNQPTNQNSICSSHSAPTESPGS*GNCRAR Trigger: GCGGGCTCTGCAGTTGCCCAAGGAACCGGGTGACTC...TGTGGGAGCTGAATGACTGGAGCATATGGAGTTCTGGTTGGTTGGTTGGTTGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060253.5 |
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| CDS-3UTR CAA 90 bp | TCACATGGCAGTGATCTCAGCCAGGAGGCAGTTCAAGACCAGCTTGGACAACATCAGTCCAACAGCACCTaGACCACCTGCAGCGATGGG | + |
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Preference number: 5 (lower is better) Translates to: SHGSDLSQEAVQDQLGQHQSNST*TTCSDG Trigger: CCCATCGCTGCAGGTGGTCAAGGTGCTGTTGGACTG...ATGTTGTCCAAGCTGGTCTTGAACTGCCTCCTGGCTGAGATCACTGCCATGTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060253.5 |
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| CDS GCA 72 bp | CGGTTCTGCTTCTTCTGGGGTGGAGCAGTGGTTTCCTaGCACCTGGGAGGAGCCTTCCCCGGGAAGCTCTGT | + |
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Preference number: 6 (lower is better) Translates to: RFCFFWGGAVVS*HLGGAFPGKLC Trigger: ACAGAGCTTCCCGGGGAAGGCTCCTCCCAGGTGGCAGGAAACCACTGCTCCACCCCAGAAGAAGCAGAACCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060253.5 |
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| CDS CCA 72 bp | CTCTCATACGGTTCTGCTTCTTCTGGGGTGGAGCAGTaGTTTCCTGCCACCTGGGAGGAGCCTTCCCCGGGA | + |
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Preference number: 6 (lower is better) Translates to: LSYGSASSGVEQ*FPATWEEPSPG Trigger: TCCCGGGGAAGGCTCCTCCCAGGTGGCAGGAAACCACTGCTCCACCCCAGAAGAAGCAGAACCGTATGAGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060253.5 |
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| CDS GCA 72 bp | TTCCCGGCTGGTAGGGCAGCAGCTCTCATACGGTTCTaGTTCTTCTGGGGTGGAGCAGTGGTTTCCTGCCAC | + |
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Preference number: 6 (lower is better) Translates to: FPAGRAAALIRF*FFWGGAVVSCH Trigger: GTGGCAGGAAACCACTGCTCCACCCCAGAAGAAGCAGAACCGTATGAGAGCTGCTGCCCTACCAGCCGGGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060253.5 |
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| CDS CCA 72 bp | GGCAGCAGCTCTCATACGGTTCTGCTTCTTCTGGGGTaGAGCAGTGGTTTCCTGCCACCTGGGAGGAGCCTT | + |
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Preference number: 6 (lower is better) Translates to: GSSSHTVLLLLG*SSGFLPPGRSL Trigger: AAGGCTCCTCCCAGGTGGCAGGAAACCACTGCTCCACCCCAGAAGAAGCAGAACCGTATGAGAGCTGCTGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060253.5 |
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| CDS CCA 72 bp | GGTAGGGCAGCAGCTCTCATACGGTTCTGCTTCTTCTaGGGTGGAGCAGTGGTTTCCTGCCACCTGGGAGGA | + |
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Preference number: 6 (lower is better) Translates to: GRAAALIRFCFF*GGAVVSCHLGG Trigger: TCCTCCCAGGTGGCAGGAAACCACTGCTCCACCCCAGAAGAAGCAGAACCGTATGAGAGCTGCTGCCCTACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060253.5 |
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