RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FECH (Mus musculus)

Ensembl gene IDs: ENSMUSG00000024588

Ensembl transcript IDs: ENSMUST00000025484.9, ENSMUST00000235215.2, ENSMUST00000235766.3, ENSMUST00000235947.2, ENSMUST00000236586.3, ENSMUST00000237358.2, ENSMUST00000237502.2, ENSMUST00000237680.2, ENSMUST00000237891.2, ENSMUST00000238149.2

Found 504 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TCTGTCCCCATCGTCCCCACCGCAGGTGTCTGGAGGCTGCACATCTaGAAATCCCACGGGTCCTCAGGCAGGGTCACAGCTGTTGGCTGG +
Preference number: 1 (lower is better)
Translates to: SVPIVPTAGVWRLHI*KSHGSSGRVTAVGW
Trigger: CCAGCCAACAGCTGTGACCCTGCCTGAGGACCCGTGGGATTTGCAGATGTGCAGCCTCCAGACACCTGCGGTGGGGACGATGGGGACAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000235215.2
ENSMUST00000235766.3
ENSMUST00000235947.2
ENSMUST00000237502.2
ENSMUST00000237680.2
3UTR CCA 90 bp GAGCTTGGGGTTTGGTGGTCTTGGCATGATGTACCTTCTCCGTGGTaGCTGCCACCGCAGCACCCGACTGGCACCTCCATGGCTGACAGG +
Preference number: 1 (lower is better)
Translates to: ELGVWWSWHDVPSPW*LPPQHPTGTSMADR
Trigger: CCTGTCAGCCATGGAGGTGCCAGTCGGGTGCTGCGGTGGCAGCCACCACGGAGAAGGTACATCATGCCAAGACCACCAAACCCCAAGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000238149.2
3UTR GCA 90 bp GCATCTTTAGGAGTTGAAGATGCCACAGGCAGTGCTTCCCGTAAGTaGCTCTCAGAGGCCAGTCTGCTCCCACTTCAGTGCCGGCAACAG +
Preference number: 1 (lower is better)
Translates to: ASLGVEDATGSASRK*LSEASLLPLQCRQQ
Trigger: CTGTTGCCGGCACTGAAGTGGGAGCAGACTGGCCTCTGAGAGGCACTTACGGGAAGCACTGCCTGTGGCATCTTCAACTCCTAAAGATGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000235766.3
ENSMUST00000236586.3
3UTR CCA 90 bp GCTAAGCCCATATCCATCAGTAGCATTTCCTGGTGGCACTGTCCCTaGAGACAGGAAGAAGGCAGAGTCCCCTTCCCTGAGGCACTGTGG +
Preference number: 1 (lower is better)
Translates to: AKPISISSISWWHCP*RQEEGRVPFPEALW
Trigger: CCACAGTGCCTCAGGGAAGGGGACTCTGCCTTCTTCCTGTCTCCAGGGACAGTGCCACCAGGAAATGCTACTGATGGATATGGGCTTAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000235766.3
ENSMUST00000236586.3
3UTR GCA 90 bp AGCAAGTTCCCTGAAAGGGGACTGGGGGAAGGGATAATGGCTGTGTaGATAGCTGTCTGCCAACAGGAGCCACTAGCCCTGAGATGTCCA +
Preference number: 1 (lower is better)
Translates to: SKFPERGLGEGIMAV*IAVCQQEPLALRCP
Trigger: TGGACATCTCAGGGCTAGTGGCTCCTGTTGGCAGACAGCTATGCACACAGCCATTATCCCTTCCCCCAGTCCCCTTTCAGGGAACTTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000235766.3
ENSMUST00000236586.3
3UTR GCA 90 bp GCTTCCCGTAAGTGCCTCTCAGAGGCCAGTCTGCTCCCACTTCAGTaGCGGCAACAGTTCCAGACAACTCATTCAGGGTTTGCTTGGCAA +
Preference number: 1 (lower is better)
Translates to: ASRKCLSEASLLPLQ*RQQFQTTHSGFAWQ
Trigger: TTGCCAAGCAAACCCTGAATGAGTTGTCTGGAACTGTTGCCGGCACTGAAGTGGGAGCAGACTGGCCTCTGAGAGGCACTTACGGGAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000235766.3
ENSMUST00000236586.3
3UTR CCA 90 bp AGCGGACAGTTCAGACTCAACTGCGTGGAGCACAGCTTGTTGGACTaGATGTGGGAGTGCACCAGATCAGCCAGGGCCTTGGAGAACAAT +
Preference number: 1 (lower is better)
Translates to: SGQFRLNCVEHSLLD*MWECTRSARALENN
Trigger: ATTGTTCTCCAAGGCCCTGGCTGATCTGGTGCACTCCCACATCCAGTCCAACAAGCTGTGCTCCACGCAGTTGAGTCTGAACTGTCCGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000235215.2
ENSMUST00000235947.2
ENSMUST00000237680.2
3UTR CCA 90 bp CCCTGGAGACAGGAAGAAGGCAGAGTCCCCTTCCCTGAGGCACTGTaGACTCAAATGAAGGCGTACACAGCAAAGACTGAACTTGCACAC +
Preference number: 1 (lower is better)
Translates to: PWRQEEGRVPFPEAL*TQMKAYTAKTELAH
Trigger: GTGTGCAAGTTCAGTCTTTGCTGTGTACGCCTTCATTTGAGTCCACAGTGCCTCAGGGAAGGGGACTCTGCCTTCTTCCTGTCTCCAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000235766.3
ENSMUST00000236586.3
3UTR TCA 90 bp ACGCACCAGTCTGTGCTGTGTTCAGGATTGGGACAGACCTGGCAGTaGGGCCAGAGACTACTGCATGCTTGTCTTAGTCTCGCTTCTGTT +
Preference number: 1 (lower is better)
Translates to: THQSVLCSGLGQTWQ*GQRLLHACLSLASV
Trigger: AACAGAAGCGAGACTAAGACAAGCATGCAGTAGTCTCTGGCCTCACTGCCAGGTCTGTCCCAATCCTGAACACAGCACAGACTGGTGCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000235766.3
ENSMUST00000236586.3
3UTR CCA 90 bp CAGTTCAGACTCAACTGCGTGGAGCACAGCTTGTTGGACTGGATGTaGGAGTGCACCAGATCAGCCAGGGCCTTGGAGAACAATGGATTT +
Preference number: 1 (lower is better)
Translates to: QFRLNCVEHSLLDWM*ECTRSARALENNGF
Trigger: AAATCCATTGTTCTCCAAGGCCCTGGCTGATCTGGTGCACTCCCACATCCAGTCCAACAAGCTGTGCTCCACGCAGTTGAGTCTGAACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000235215.2
ENSMUST00000235947.2
ENSMUST00000237680.2
3UTR TCA 90 bp AGGAAGAAGGCAGAGTCCCCTTCCCTGAGGCACTGTGGACTCAAATaGAGGCGTACACAGCAAAGACTGAACTTGCACACGTTTATTAGG +
Preference number: 1 (lower is better)
Translates to: RKKAESPSLRHCGLK*RRTQQRLNLHTFIR
Trigger: CCTAATAAACGTGTGCAAGTTCAGTCTTTGCTGTGTACGCCTTCATTTGAGTCCACAGTGCCTCAGGGAAGGGGACTCTGCCTTCTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000235766.3
ENSMUST00000236586.3
3UTR CCA 90 bp TGGTGTCAGCATTTGGAAGCTGATTATGGGATGGATCCCCGGGTATaGCAGTCTCTAGATGGTCCATCCTTTCGTCTCAGCTCCAAACTT +
Preference number: 1 (lower is better)
Translates to: WCQHLEADYGMDPRV*QSLDGPSFRLSSKL
Trigger: AAGTTTGGAGCTGAGACGAAAGGATGGACCATCTAGAGACTGCCATACCCGGGGATCCATCCCATAATCAGCTTCCAAATGCTGACACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000235766.3
ENSMUST00000236586.3
3UTR CCA 90 bp CATATTGTTGTTCCACCTATAAGGTTGCAGACCCCTTTAGCTCCTTaGATACTTTCTCTAGCTCCTCCGTTGGGGGCCCTGTGTTCCATC +
Preference number: 1 (lower is better)
Translates to: HIVVPPIRLQTPLAP*ILSLAPPLGALCSI
Trigger: GATGGAACACAGGGCCCCCAACGGAGGAGCTAGAGAAAGTATCCAAGGAGCTAAAGGGGTCTGCAACCTTATAGGTGGAACAACAATATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000235766.3
ENSMUST00000236586.3
3UTR CCA 90 bp ACTAATTTCCAGAGTGGTTGTACAAGCTTGCAATCTCGCCAACAATaGAGGAGTGTTCCTCTTTTCCCACATCCTCGCCAGCATCTGCTG +
Preference number: 1 (lower is better)
Translates to: TNFQSGCTSLQSRQQ*RSVPLFPHPRQHLL
Trigger: CAGCAGATGCTGGCGAGGATGTGGGAAAAGAGGAACACTCCTCCATTGTTGGCGAGATTGCAAGCTTGTACAACCACTCTGGAAATTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000235766.3
ENSMUST00000236586.3
3UTR GCA 90 bp TTCAATATCCAGTTCGTAGAGCGTCTCAATGTGGTCACTGGTAAATaGTATTGGAACCAAGAGGATGTTCTTCCTCCCCCGCTCACAAAG +
Preference number: 1 (lower is better)
Translates to: FNIQFVERLNVVTGK*YWNQEDVLPPPLTK
Trigger: CTTTGTGAGCGGGGGAGGAAGAACATCCTCTTGGTTCCAATAGCATTTACCAGTGACCACATTGAGACGCTCTACGAACTGGATATTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000235215.2
ENSMUST00000235947.2
ENSMUST00000237680.2
3UTR GCA 90 bp AGGCGTACACAGCAAAGACTGAACTTGCACACGTTTATTAGGCTATaGGCCCGGGGAATCTTAGCACTCTTGAAACATGCACTTGTTTCA +
Preference number: 1 (lower is better)
Translates to: RRTQQRLNLHTFIRL*ARGILALLKHALVS
Trigger: TGAAACAAGTGCATGTTTCAAGAGTGCTAAGATTCCCCGGGCGCATAGCCTAATAAACGTGTGCAAGTTCAGTCTTTGCTGTGTACGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000235766.3
ENSMUST00000236586.3
3UTR GCA 90 bp AACAATGGAGGAGTGTTCCTCTTTTCCCACATCCTCGCCAGCATCTaGTGTCACCTGAATTGTAATTCCAGTTCTTCACAAACCATTCCA +
Preference number: 1 (lower is better)
Translates to: NNGGVFLFSHILASI*CHLNCNSSSSQTIP
Trigger: TGGAATGGTTTGTGAAGAACTGGAATTACAATTCAGGTGACAGCAGATGCTGGCGAGGATGTGGGAAAAGAGGAACACTCCTCCATTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000235766.3
ENSMUST00000236586.3
3UTR CCA 90 bp TCTTCTGATACATATGCAGCTAGAGACACGAGCTCTGGAGGGTACTaGTTAGTTCATATTGTTGTTCCACCTATAAGGTTGCAGACCCCT +
Preference number: 1 (lower is better)
Translates to: SSDTYAARDTSSGGY*LVHIVVPPIRLQTP
Trigger: AGGGGTCTGCAACCTTATAGGTGGAACAACAATATGAACTAACCAGTACCCTCCAGAGCTCGTGTCTCTAGCTGCATATGTATCAGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000235766.3
ENSMUST00000236586.3
3UTR TCA 90 bp GAGTGTTCCTCTTTTCCCACATCCTCGCCAGCATCTGCTGTCACCTaGATTGTAATTCCAGTTCTTCACAAACCATTCCACAAAATAGAA +
Preference number: 1 (lower is better)
Translates to: ECSSFPTSSPASAVT*IVIPVLHKPFHKIE
Trigger: TTCTATTTTGTGGAATGGTTTGTGAAGAACTGGAATTACAATTCAGGTGACAGCAGATGCTGGCGAGGATGTGGGAAAAGAGGAACACTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000235766.3
ENSMUST00000236586.3
3UTR GCA 90 bp GAGACAGCTATATCAGAGTCCTTTCAGCAAAATCTTGTTAGTGTATaGAATGGTGTCAGCATTTGGAAGCTGATTATGGGATGGATCCCC +
Preference number: 1 (lower is better)
Translates to: ETAISESFQQNLVSV*NGVSIWKLIMGWIP
Trigger: GGGGATCCATCCCATAATCAGCTTCCAAATGCTGACACCATTGCATACACTAACAAGATTTTGCTGAAAGGACTCTGATATAGCTGTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000235766.3
ENSMUST00000236586.3
3UTR TCA 90 bp CCTAATATTACCTTAGGGCTGTTGACAGGCTTAGTCTGGGCACGCTaGGATGGAAAAATCCACTTCTTCATAGATGATAGTTGCAAACTA +
Preference number: 1 (lower is better)
Translates to: PNITLGLLTGLVWAR*DGKIHFFIDDSCKL
Trigger: TAGTTTGCAACTATCATCTATGAAGAAGTGGATTTTTCCATCTCAGCGTGCCCAGACTAAGCCTGTCAACAGCCCTAAGGTAATATTAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000235766.3
ENSMUST00000236586.3
3UTR TCA 90 bp TATATCCATAAGACTGTAAACATCTCAGTCACCACTGGTAGCACATaGGGAGACACACCACAATGTTGTAGGAAGTTGTTTTGGGCAATA +
Preference number: 1 (lower is better)
Translates to: YIHKTVNISVTTGST*GDTPQCCRKLFWAI
Trigger: TATTGCCCAAAACAACTTCCTACAACATTGTGGTGTGTCTCCTCATGTGCTACCAGTGGTGACTGAGATGTTTACAGTCTTATGGATATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000025484.9
ENSMUST00000235215.2
ENSMUST00000235766.3
ENSMUST00000235947.2
ENSMUST00000236586.3
ENSMUST00000237502.2
ENSMUST00000237680.2
3UTR TCA 90 bp CATTCCTGGGATGTCCCAGTAGACAGATATTCCATATTGATAAATTaGCCCCAGGATCAGTCACTATACTTGTATATGAAAATAGAAATC +
Preference number: 1 (lower is better)
Translates to: HSWDVPVDRYSILIN*PQDQSLYLYMKIEI
Trigger: GATTTCTATTTTCATATACAAGTATAGTGACTGATCCTGGGGTCAATTTATCAATATGGAATATCTGTCTACTGGGACATCCCAGGAATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000025484.9
ENSMUST00000235215.2
ENSMUST00000235766.3
ENSMUST00000235947.2
ENSMUST00000236586.3
ENSMUST00000237358.2
ENSMUST00000237502.2
ENSMUST00000237680.2
3UTR-3UTR TCA 90 bp GTCCCCATCGTCCCCACCGCAGGTGTCTGGAGGCTGCACATCTGCAAATCCCACCTGCAAAGCACTGGATaGGGAGGGGGTGTGTGGGCC +
Preference number: 2 (lower is better)
Translates to: VPIVPTAGVWRLHICKSHLQSTG*GGGVWA
Trigger: GGCCCACACACCCCCTCCTCATCCAGTGCTTTGCAG...GTGGGATTTGCAGATGTGCAGCCTCCAGACACCTGCGGTGGGGACGATGGGGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000235215.2
ENSMUST00000237680.2
3UTR-3UTR GCA 90 bp CGTCCCCACCGCAGGTGTCTGGAGGCTGCACATCTGCAAATCCCACGGGTCCTCCAGGTGTCTGGAGGCTaGACATCTGCAAATCCCACG +
Preference number: 2 (lower is better)
Translates to: RPHRRCLEAAHLQIPRVLQVSGG*TSANPT
Trigger: CGTGGGATTTGCAGATGTGCAGCCTCCAGACACCTG...GAGGACCCGTGGGATTTGCAGATGTGCAGCCTCCAGACACCTGCGGTGGGGACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000025484.9
ENSMUST00000235215.2
ENSMUST00000235766.3
ENSMUST00000235947.2
ENSMUST00000236586.3
ENSMUST00000237358.2
ENSMUST00000237502.2
ENSMUST00000237680.2
3UTR-3UTR CCA 90 bp GGCGTGAGGCAGATGTCCTTCACGCAGGTCTGCGGGAGAGCCCCTTCCCCTGGGATCAGTAGCATTTCCTaGTGGCACTGTCCCTGGAGA +
Preference number: 2 (lower is better)
Translates to: GVRQMSFTQVCGRAPSPGISSIS*WHCPWR
Trigger: TCTCCAGGGACAGTGCCACCAGGAAATGCTACTGAT...CCCAGGGGAAGGGGCTCTCCCGCAGACCTGCGTGAAGGACATCTGCCTCACGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000235766.3
ENSMUST00000236586.3
3UTR-3UTR TCA 90 bp ACTAGCGCCCAGGAAACGGGAGCGGGAGGCACACTGGAAGCCAGTTTGGCCTACTGGAAGTCCACATCTTaGTGGGGGATCCACCTCCGA +
Preference number: 2 (lower is better)
Translates to: TSAQETGAGGTLEASLAYWKSTS*WGIHLR
Trigger: TCGGAGGTGGATCCCCCATCAAGATGTGGACTTCCA...GTAGGCCAAACTGGCTTCCAGTGTGCCTCCCGCTCCCGTTTCCTGGGCGCTAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000235215.2
ENSMUST00000237680.2
3UTR-3UTR GCA 90 bp ACTAGCGCCCAGGAAACGGGAGCGGGAGGCACACTGGAAGCCAGTTTGGCCTACTGGAGGCTGCACATCTaGAAATCCCACGGGTCCTCA +
Preference number: 2 (lower is better)
Translates to: TSAQETGAGGTLEASLAYWRLHI*KSHGSS
Trigger: TGAGGACCCGTGGGATTTGCAGATGTGCAGCCTCCA...GTAGGCCAAACTGGCTTCCAGTGTGCCTCCCGCTCCCGTTTCCTGGGCGCTAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000025484.9
ENSMUST00000235215.2
ENSMUST00000235766.3
ENSMUST00000235947.2
ENSMUST00000236586.3
ENSMUST00000237358.2
ENSMUST00000237502.2
ENSMUST00000237680.2
3UTR-3UTR GCA 90 bp ACTAGCGCCCAGGAAACGGGAGCGGGAGGCACACTGGAAGCCAGTTTGGCCTACCAGGTGTCTGGAGGCTaGACATCTGCAAATCCCACG +
Preference number: 2 (lower is better)
Translates to: TSAQETGAGGTLEASLAYQVSGG*TSANPT
Trigger: CGTGGGATTTGCAGATGTGCAGCCTCCAGACACCTG...GTAGGCCAAACTGGCTTCCAGTGTGCCTCCCGCTCCCGTTTCCTGGGCGCTAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000025484.9
ENSMUST00000235215.2
ENSMUST00000235766.3
ENSMUST00000235947.2
ENSMUST00000236586.3
ENSMUST00000237358.2
ENSMUST00000237502.2
ENSMUST00000237680.2
3UTR-3UTR CCA 90 bp ACTAGCGCCCAGGAAACGGGAGCGGGAGGCACACTGGAAGCCAGTTTGGCCTACTTGTGCTCCACTTCATaGTGGGCTTCTGGCCCACCT +
Preference number: 2 (lower is better)
Translates to: TSAQETGAGGTLEASLAYLCSTS*WASGPP
Trigger: AGGTGGGCCAGAAGCCCACCATGAAGTGGAGCACAA...GTAGGCCAAACTGGCTTCCAGTGTGCCTCCCGCTCCCGTTTCCTGGGCGCTAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000235215.2
ENSMUST00000237680.2
3UTR-3UTR TCA 90 bp GTGTCTGGAGGCTGCACATCTGCAAATCCCACGGGTCCTCAGGCAGGGTCACAGTGGAAGTCCACATCTTaGTGGGGGATCCACCTCCGA +
Preference number: 2 (lower is better)
Translates to: VSGGCTSANPTGPQAGSQWKSTS*WGIHLR
Trigger: TCGGAGGTGGATCCCCCATCAAGATGTGGACTTCCA...CTGTGACCCTGCCTGAGGACCCGTGGGATTTGCAGATGTGCAGCCTCCAGACAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000235215.2
ENSMUST00000237680.2
3UTR-3UTR CCA 90 bp GCAAATCCCACGGGTCCTCAGGCAGGGTCACAGCTGTTGGCTGGTGAAGAAGGACCCACCGCAGGTGTCTaGAGGCTGCACATCTGCAAA +
Preference number: 2 (lower is better)
Translates to: ANPTGPQAGSQLLAGEEGPTAGV*RLHICK
Trigger: TTTGCAGATGTGCAGCCTCCAGACACCTGCGGTGGG...TCCTTCTTCACCAGCCAACAGCTGTGACCCTGCCTGAGGACCCGTGGGATTTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000235215.2
ENSMUST00000235766.3
ENSMUST00000235947.2
ENSMUST00000237502.2
ENSMUST00000237680.2
3UTR-3UTR CCA 90 bp GTGTCTGGAGGCTGCACATCTGCAAATCCCACGGGTCCTCAGGCAGGGTCACAGTGGTCTGCAAAGCACTaGATGAGGAGGGGGTGTGTG +
Preference number: 2 (lower is better)
Translates to: VSGGCTSANPTGPQAGSQWSAKH*MRRGCV
Trigger: CACACACCCCCTCCTCATCCAGTGCTTTGCAGACCA...CTGTGACCCTGCCTGAGGACCCGTGGGATTTGCAGATGTGCAGCCTCCAGACAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000235215.2
ENSMUST00000237680.2
3UTR-3UTR TCA 90 bp TGGCAGTGGACAGTGGCTACACTGTCAACAGAAGCAGTGCCAGGTGACCGCTCCATGCAGGTGAGCACATaGTCCCAAGCTGTGCGCTCA +
Preference number: 2 (lower is better)
Translates to: WQWTVATLSTEAVPGDRSMQVST*SQAVRS
Trigger: TGAGCGCACAGCTTGGGATCATGTGCTCACCTGCAT...GGAGCGGTCACCTGGCACTGCTTCTGTTGACAGTGTAGCCACTGTCCACTGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000025484.9
ENSMUST00000235215.2
ENSMUST00000235766.3
ENSMUST00000235947.2
ENSMUST00000236586.3
ENSMUST00000237502.2
3UTR-3UTR GCA 90 bp AGGCTGTGGGTCTTTCTGGTGACCCTGCTGGGCGTTTGGGACAGTATGCTCCCTTGGAGGCTGCACATCTaGAAATCCCACGGGTCCTCA +
Preference number: 2 (lower is better)
Translates to: RLWVFLVTLLGVWDSMLPWRLHI*KSHGSS
Trigger: TGAGGACCCGTGGGATTTGCAGATGTGCAGCCTCCA...AGGGAGCATACTGTCCCAAACGCCCAGCAGGGTCACCAGAAAGACCCACAGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000235766.3
ENSMUST00000236586.3
3UTR-3UTR GCA 90 bp GCAAATCCCACGGGTCCTCAGGCAGGGTCACAGCTGTTGGCTGGTGAAGAAGGACAGGTGTCTGGAGGCTaGACATCTGCAAATCCCACG +
Preference number: 2 (lower is better)
Translates to: ANPTGPQAGSQLLAGEEGQVSGG*TSANPT
Trigger: CGTGGGATTTGCAGATGTGCAGCCTCCAGACACCTG...TCCTTCTTCACCAGCCAACAGCTGTGACCCTGCCTGAGGACCCGTGGGATTTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000235215.2
ENSMUST00000235766.3
ENSMUST00000235947.2
ENSMUST00000237502.2
ENSMUST00000237680.2
3UTR-3UTR GCA 90 bp TCTGTGATGCTAACTAGCGCCCAGGAAACGGGAGCGGGAGGCACACTGGAAGCCTGTCAACAGAAGCAGTaGCAGGTGACCGCTCCAACT +
Preference number: 2 (lower is better)
Translates to: SVMLTSAQETGAGGTLEACQQKQ*QVTAPT
Trigger: AGTTGGAGCGGTCACCTGGCACTGCTTCTGTTGACA...GGCTTCCAGTGTGCCTCCCGCTCCCGTTTCCTGGGCGCTAGTTAGCATCACAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000025484.9
ENSMUST00000235215.2
ENSMUST00000235766.3
ENSMUST00000235947.2
ENSMUST00000236586.3
ENSMUST00000237502.2
3UTR-3UTR CCA 90 bp GGGAGGGAGATGAGACTCTTGCAGTCACCACAGTGGCAGTGGACAGTGGCTACACCCACCGCAGGTGTCTaGAGGCTGCACATCTGCAAA +
Preference number: 2 (lower is better)
Translates to: GREMRLLQSPQWQWTVATPTAGV*RLHICK
Trigger: TTTGCAGATGTGCAGCCTCCAGACACCTGCGGTGGG...TGTAGCCACTGTCCACTGCCACTGTGGTGACTGCAAGAGTCTCATCTCCCTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000025484.9
ENSMUST00000235215.2
ENSMUST00000235766.3
ENSMUST00000235947.2
ENSMUST00000236586.3
ENSMUST00000237502.2
3UTR-3UTR CCA 90 bp TCTGTGATGCTAACTAGCGCCCAGGAAACGGGAGCGGGAGGCACACTGGAAGCCAGCTGCTGCCTGTGGTaGAGCAGCTATACTGTGGAT +
Preference number: 2 (lower is better)
Translates to: SVMLTSAQETGAGGTLEASCCLW*SSYTVD
Trigger: ATCCACAGTATAGCTGCTCCACCACAGGCAGCAGCT...GGCTTCCAGTGTGCCTCCCGCTCCCGTTTCCTGGGCGCTAGTTAGCATCACAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000235215.2
ENSMUST00000237680.2
3UTR-3UTR CCA 90 bp ACTAGCGCCCAGGAAACGGGAGCGGGAGGCACACTGGAAGCCAGTTTGGCCTACTTAAGCTGCTGCCTGTaGTGGAGCAGCTATACTGTG +
Preference number: 2 (lower is better)
Translates to: TSAQETGAGGTLEASLAYLSCCL*WSSYTV
Trigger: CACAGTATAGCTGCTCCACCACAGGCAGCAGCTTAA...GTAGGCCAAACTGGCTTCCAGTGTGCCTCCCGCTCCCGTTTCCTGGGCGCTAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000235215.2
ENSMUST00000237680.2
3UTR-3UTR CCA 90 bp GGCGTGAGGCAGATGTCCTTCACGCAGGTCTGCGGGAGAGCCCCTTCCCCTGGGCCAGAGGTGATGAAATaGATACAGGGACATTCCAAA +
Preference number: 2 (lower is better)
Translates to: GVRQMSFTQVCGRAPSPGPEVMK*IQGHSK
Trigger: TTTGGAATGTCCCTGTATCCATTTCATCACCTCTGG...CCCAGGGGAAGGGGCTCTCCCGCAGACCTGCGTGAAGGACATCTGCCTCACGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000235766.3
ENSMUST00000236586.3
3UTR-3UTR TCA 90 bp TCCCCATCGTCCCCACCGCAGGTGTCTGGAGGCTGCACATCTGCAAATCCCACGACTGTGGATACTGTGTaGAAGCAATGGCCCTCTCTA +
Preference number: 2 (lower is better)
Translates to: SPSSPPQVSGGCTSANPTTVDTV*KQWPSL
Trigger: TAGAGAGGGCCATTGCTTTCACACAGTATCCACAGT...CGTGGGATTTGCAGATGTGCAGCCTCCAGACACCTGCGGTGGGGACGATGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000235215.2
ENSMUST00000237680.2
3UTR-3UTR TCA 90 bp CCATCGTCCCCACCGCAGGTGTCTGGAGGCTGCACATCTGCAAATCCCACGGGTACTGTGGATACTGTGTaGAAGCAATGGCCCTCTCTA +
Preference number: 2 (lower is better)
Translates to: PSSPPQVSGGCTSANPTGTVDTV*KQWPSL
Trigger: TAGAGAGGGCCATTGCTTTCACACAGTATCCACAGT...ACCCGTGGGATTTGCAGATGTGCAGCCTCCAGACACCTGCGGTGGGGACGATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000235215.2
ENSMUST00000237680.2
3UTR-3UTR TCA 90 bp TCTGTGATGCTAACTAGCGCCCAGGAAACGGGAGCGGGAGGCACACTGGAAGCCAACCCAGCTTTTCCATaGCTTTGTGGACAGTGGCTC +
Preference number: 2 (lower is better)
Translates to: SVMLTSAQETGAGGTLEANPAFP*LCGQWL
Trigger: GAGCCACTGTCCACAAAGTCATGGAAAAGCTGGGTT...GGCTTCCAGTGTGCCTCCCGCTCCCGTTTCCTGGGCGCTAGTTAGCATCACAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000235215.2
ENSMUST00000237680.2
3UTR-3UTR GCA 90 bp CGTCCCCACCGCAGGTGTCTGGAGGCTGCACATCTGCAAATCCCACGGGTCCTCAGAAATCACAGTTTGTaGCCAGACAAACGTGGCTTC +
Preference number: 2 (lower is better)
Translates to: RPHRRCLEAAHLQIPRVLRNHSL*PDKRGF
Trigger: GAAGCCACGTTTGTCTGGGCACAAACTGTGATTTCT...GAGGACCCGTGGGATTTGCAGATGTGCAGCCTCCAGACACCTGCGGTGGGGACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000025484.9
ENSMUST00000235215.2
ENSMUST00000235766.3
ENSMUST00000235947.2
ENSMUST00000236586.3
ENSMUST00000237358.2
ENSMUST00000237502.2
ENSMUST00000237680.2
3UTR-3UTR CCA 90 bp GGGTTTGGTGGTCTTGGCATGATGTACCTTCTCCGTGGTGGCTGCCACCGCAGCACTGCTCTTGAATTTTaGGGGTTCGGCGTTTGGCGA +
Preference number: 2 (lower is better)
Translates to: GFGGLGMMYLLRGGCHRSTALEF*GFGVWR
Trigger: TCGCCAAACGCCGAACCCCCAAAATTCAAGAGCAGT...GCTGCGGTGGCAGCCACCACGGAGAAGGTACATCATGCCAAGACCACCAAACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000238149.2
3UTR-3UTR TCA 90 bp CAGTTTCCAGGGAGGGAGATGAGACTCTTGCAGTCACCACAGTGGCAGTGGACAATGCAGGTGAGCACATaGTCCCAAGCTGTGCGCTCA +
Preference number: 2 (lower is better)
Translates to: QFPGREMRLLQSPQWQWTMQVST*SQAVRS
Trigger: TGAGCGCACAGCTTGGGATCATGTGCTCACCTGCAT...TGTCCACTGCCACTGTGGTGACTGCAAGAGTCTCATCTCCCTCCCTGGAAACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000025484.9
ENSMUST00000235215.2
ENSMUST00000235766.3
ENSMUST00000235947.2
ENSMUST00000236586.3
ENSMUST00000237502.2
3UTR-3UTR GCA 90 bp GCAAATCCCACGGGTCCTCAGGCAGGGTCACAGCTGTTGGCTGGTGAAGAAGGACAGTTCAGACTCAACTaGGTGGAGCACAGCTTGTTG +
Preference number: 2 (lower is better)
Translates to: ANPTGPQAGSQLLAGEEGQFRLN*VEHSLL
Trigger: CAACAAGCTGTGCTCCACGCAGTTGAGTCTGAACTG...TCCTTCTTCACCAGCCAACAGCTGTGACCCTGCCTGAGGACCCGTGGGATTTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000235215.2
ENSMUST00000235947.2
ENSMUST00000237502.2
ENSMUST00000237680.2
3UTR-3UTR CCA 90 bp GTGTCTGGAGGCTGCACATCTGCAAATCCCACGGGTCCTCAGGCAGGGTCACAGCAGGGTCACAGCTGTTaGCTGGTGAAGAAGGATTTA +
Preference number: 2 (lower is better)
Translates to: VSGGCTSANPTGPQAGSQQGHSC*LVKKDL
Trigger: TAAATCCTTCTTCACCAGCCAACAGCTGTGACCCTG...CTGTGACCCTGCCTGAGGACCCGTGGGATTTGCAGATGTGCAGCCTCCAGACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000235215.2
ENSMUST00000235766.3
ENSMUST00000235947.2
ENSMUST00000237502.2
ENSMUST00000237680.2
3UTR-3UTR CCA 90 bp GGGACTGGGGGAAGGGATAATGGCTGTGTGCATAGCTGTCTGCCAACAGGAGCCTTCCCTGAGGCACTGTaGACTCAAATGAAGGCGTAC +
Preference number: 2 (lower is better)
Translates to: GTGGRDNGCVHSCLPTGAFPEAL*TQMKAY
Trigger: GTACGCCTTCATTTGAGTCCACAGTGCCTCAGGGAA...GGCTCCTGTTGGCAGACAGCTATGCACACAGCCATTATCCCTTCCCCCAGTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000235766.3
ENSMUST00000236586.3
3UTR-3UTR CCA 90 bp TCACCACAGTGGCAGTGGACAGTGGCTACACTGTCAACAGAAGCAGTGCCAGGTTGGTGGCACTGTCCCTaGAGACAGGAAGAAGGCAGA +
Preference number: 2 (lower is better)
Translates to: SPQWQWTVATLSTEAVPGWWHCP*RQEEGR
Trigger: TCTGCCTTCTTCCTGTCTCCAGGGACAGTGCCACCA...ACCTGGCACTGCTTCTGTTGACAGTGTAGCCACTGTCCACTGCCACTGTGGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000235766.3
ENSMUST00000236586.3
3UTR-3UTR TCA 90 bp GTTTCAGTTTCCAGGGAGGGAGATGAGACTCTTGCAGTCACCACAGTGGCAGTGATAGCCTCATCTGTCTaGGGGCCCAACCAGGGTACT +
Preference number: 2 (lower is better)
Translates to: VSVSREGDETLAVTTVAVIASSV*GPNQGT
Trigger: AGTACCCTGGTTGGGCCCTCAGACAGATGAGGCTAT...CACTGCCACTGTGGTGACTGCAAGAGTCTCATCTCCCTCCCTGGAAACTGAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235215.2
3UTR-3UTR GCA 90 bp GAGCCAAGACTGATGACAAGCAAGTTCCCTGAAAGGGGACTGGGGGAAGGGATACAGGTGTCTGGAGGCTaGACATCTGCAAATCCCACG +
Preference number: 2 (lower is better)
Translates to: EPRLMTSKFPERGLGEGIQVSGG*TSANPT
Trigger: CGTGGGATTTGCAGATGTGCAGCCTCCAGACACCTG...TATCCCTTCCCCCAGTCCCCTTTCAGGGAACTTGCTTGTCATCAGTCTTGGCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000235766.3
ENSMUST00000236586.3
3UTR-3UTR GCA 90 bp TCCCCATCGTCCCCACCGCAGGTGTCTGGAGGCTGCACATCTGCAAATCCCACGGTGGTCACTGGTAAATaGTATTGGAACCAAGAGGAT +
Preference number: 2 (lower is better)
Translates to: SPSSPPQVSGGCTSANPTVVTGK*YWNQED
Trigger: ATCCTCTTGGTTCCAATAGCATTTACCAGTGACCAC...CGTGGGATTTGCAGATGTGCAGCCTCCAGACACCTGCGGTGGGGACGATGGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000235215.2
ENSMUST00000235947.2
ENSMUST00000237680.2
3UTR-3UTR GCA 90 bp GTCACCACAGTGGCAGTGGACAGTGGCTACACTGTCAACAGAAGCAGTGCCAGGCAGTTCAGACTCAACTaGGTGGAGCACAGCTTGTTG +
Preference number: 2 (lower is better)
Translates to: VTTVAVDSGYTVNRSSARQFRLN*VEHSLL
Trigger: CAACAAGCTGTGCTCCACGCAGTTGAGTCTGAACTG...CCTGGCACTGCTTCTGTTGACAGTGTAGCCACTGTCCACTGCCACTGTGGTGAC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000235215.2
ENSMUST00000235947.2
ENSMUST00000237502.2
3UTR-3UTR CCA 90 bp CCACAGTGGCAGTGGACAGTGGCTACACTGTCAACAGAAGCAGTGCCAGGTGACAGTGGCAGTGGACAGTaGCTACACTGTCAACAGAAG +
Preference number: 2 (lower is better)
Translates to: PQWQWTVATLSTEAVPGDSGSGQ*LHCQQK
Trigger: CTTCTGTTGACAGTGTAGCCACTGTCCACTGCCACT...GTCACCTGGCACTGCTTCTGTTGACAGTGTAGCCACTGTCCACTGCCACTGTGG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000025484.9
ENSMUST00000235215.2
ENSMUST00000235766.3
ENSMUST00000235947.2
ENSMUST00000236586.3
ENSMUST00000237502.2
3UTR-3UTR CCA 90 bp CAGTTTCCAGGGAGGGAGATGAGACTCTTGCAGTCACCACAGTGGCAGTGGACATCACCACAGTGGCAGTaGACAGTGGCTACACTGTCA +
Preference number: 2 (lower is better)
Translates to: QFPGREMRLLQSPQWQWTSPQWQ*TVATLS
Trigger: TGACAGTGTAGCCACTGTCCACTGCCACTGTGGTGA...TGTCCACTGCCACTGTGGTGACTGCAAGAGTCTCATCTCCCTCCCTGGAAACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000025484.9
ENSMUST00000235215.2
ENSMUST00000235766.3
ENSMUST00000235947.2
ENSMUST00000236586.3
ENSMUST00000237502.2
3UTR-3UTR CCA 90 bp TCTGTGATGCTAACTAGCGCCCAGGAAACGGGAGCGGGAGGCACACTGGAAGCCAGCTCTTTCAGAATGTaGTCTGCAAAGCACTGGATG +
Preference number: 2 (lower is better)
Translates to: SVMLTSAQETGAGGTLEASSFRM*SAKHWM
Trigger: CATCCAGTGCTTTGCAGACCACATTCTGAAAGAGCT...GGCTTCCAGTGTGCCTCCCGCTCCCGTTTCCTGGGCGCTAGTTAGCATCACAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000235215.2
ENSMUST00000237680.2
3UTR CAA 90 bp CAAGGGCCCTCCCTGCAAGTATTCCCTGAGCTTGTCCCGGGAAGATaGCTCCAGATGGGCGTTTCTTTTAAACTGAGCTGGACAGAAGTG +
Preference number: 2 (lower is better)
Translates to: QGPSLQVFPELVPGR*LQMGVSFKLSWTEV
Trigger: CACTTCTGTCCAGCTCAGTTTAAAAGAAACGCCCATCTGGAGCAATCTTCCCGGGACAAGCTCAGGGAATACTTGCAGGGAGGGCCCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000237502.2
3UTR-3UTR TCA 90 bp GTCCCCATCGTCCCCACCGCAGGTGTCTGGAGGCTGCACATCTGCAAATCCCACCATTGGACACATAAGTaGGTGGATTTTATTCCACCT +
Preference number: 2 (lower is better)
Translates to: VPIVPTAGVWRLHICKSHHWTHK*VDFIPP
Trigger: AGGTGGAATAAAATCCACTCACTTATGTGTCCAATG...GTGGGATTTGCAGATGTGCAGCCTCCAGACACCTGCGGTGGGGACGATGGGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000235215.2
3UTR-3UTR GCA 90 bp GGAACACAATGTTGTATGTCTGTGATGCTAACTAGCGCCCAGGAAACGGGAGCGCAGGTGTCTGGAGGCTaGACATCTGCAAATCCCACG +
Preference number: 2 (lower is better)
Translates to: GTQCCMSVMLTSAQETGAQVSGG*TSANPT
Trigger: CGTGGGATTTGCAGATGTGCAGCCTCCAGACACCTG...CGCTCCCGTTTCCTGGGCGCTAGTTAGCATCACAGACATACAACATTGTGTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000025484.9
ENSMUST00000235215.2
ENSMUST00000235766.3
ENSMUST00000235947.2
ENSMUST00000236586.3
ENSMUST00000237358.2
ENSMUST00000237502.2
ENSMUST00000237680.2
3UTR-3UTR GCA 90 bp TGGCAGTGGACAGTGGCTACACTGTCAACAGAAGCAGTGCCAGGTGACCGCTCCAGAAATCACAGTTTGTaGCCAGACAAACGTGGCTTC +
Preference number: 2 (lower is better)
Translates to: WQWTVATLSTEAVPGDRSRNHSL*PDKRGF
Trigger: GAAGCCACGTTTGTCTGGGCACAAACTGTGATTTCT...GGAGCGGTCACCTGGCACTGCTTCTGTTGACAGTGTAGCCACTGTCCACTGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000025484.9
ENSMUST00000235215.2
ENSMUST00000235766.3
ENSMUST00000235947.2
ENSMUST00000236586.3
ENSMUST00000237502.2
3UTR-3UTR GCA 90 bp GAGCCAAGACTGATGACAAGCAAGTTCCCTGAAAGGGGACTGGGGGAAGGGATATGTCAACAGAAGCAGTaGCAGGTGACCGCTCCAACT +
Preference number: 2 (lower is better)
Translates to: EPRLMTSKFPERGLGEGICQQKQ*QVTAPT
Trigger: AGTTGGAGCGGTCACCTGGCACTGCTTCTGTTGACA...TATCCCTTCCCCCAGTCCCCTTTCAGGGAACTTGCTTGTCATCAGTCTTGGCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000235766.3
ENSMUST00000236586.3
3UTR-3UTR GCA 90 bp AACACAGGCAAGAGAGAAATCACAGTTTGTGCCCAGACAAACGTGGCTTCTGTCGACTGGATGTGGGAGTaGACCAGATCAGCCAGGGCC +
Preference number: 2 (lower is better)
Translates to: NTGKREITVCAQTNVASVDWMWE*TRSARA
Trigger: GGCCCTGGCTGATCTGGTGCACTCCCACATCCAGTC...GACAGAAGCCACGTTTGTCTGGGCACAAACTGTGATTTCTCTCTTGCCTGTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000235215.2
ENSMUST00000235947.2
ENSMUST00000237502.2
ENSMUST00000237680.2
3UTR-3UTR CCA 90 bp AAGAGAGAAATCACAGTTTGTGCCCAGACAAACGTGGCTTCTGTCCCCATCGTCCCCACCGCAGGTGTCTaGAGGCTGCACATCTGCAAA +
Preference number: 2 (lower is better)
Translates to: KREITVCAQTNVASVPIVPTAGV*RLHICK
Trigger: TTTGCAGATGTGCAGCCTCCAGACACCTGCGGTGGG...GACGATGGGGACAGAAGCCACGTTTGTCTGGGCACAAACTGTGATTTCTCTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000025484.9
ENSMUST00000235215.2
ENSMUST00000235766.3
ENSMUST00000235947.2
ENSMUST00000236586.3
ENSMUST00000237358.2
ENSMUST00000237502.2
ENSMUST00000237680.2
3UTR-3UTR CCA 90 bp GTGTCTGGAGGCTGCACATCTGCAAATCCCACGGGTCCTCAGGCAGGGTCACAGGGAGCAGCTATACTGTaGATACTGTGTGAAAGCAAT +
Preference number: 2 (lower is better)
Translates to: VSGGCTSANPTGPQAGSQGAAIL*ILCESN
Trigger: ATTGCTTTCACACAGTATCCACAGTATAGCTGCTCC...CTGTGACCCTGCCTGAGGACCCGTGGGATTTGCAGATGTGCAGCCTCCAGACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000235215.2
ENSMUST00000237680.2
3UTR-3UTR TCA 90 bp GTACACAGAGCAGCTCGAGACAGCACTGGCAGTTCACTGCTAATTACAATGACAGACAAGCAAGTTCCCTaGAAGGGGACTGGGGGAAGG +
Preference number: 2 (lower is better)
Translates to: VHRAARDSTGSSLLITMTDKQVP*KGTGGR
Trigger: CCTTCCCCCAGTCCCCTTTCAGGGAACTTGCTTGTC...TGTCATTGTAATTAGCAGTGAACTGCCAGTGCTGTCTCGAGCTGCTCTGTGTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000235766.3
ENSMUST00000236586.3
3UTR-3UTR TCA 90 bp AGAGCCTCTGAAGAAAGTCTTGAACTTCTCCAAGGGTTTCGGGGCCTCCCATGTTTGGTGGTCTTGGCATaGTGTACCTTCTCCGTGGTG +
Preference number: 2 (lower is better)
Translates to: RASEESLELLQGFRGLPCLVVLA*CTFSVV
Trigger: CACCACGGAGAAGGTACATCATGCCAAGACCACCAA...ACATGGGAGGCCCCGAAACCCTTGGAGAAGTTCAAGACTTTCTTCAGAGGCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000238149.2
3UTR-3UTR GCA 90 bp GTCACCACAGTGGCAGTGGACAGTGGCTACACTGTCAACAGAAGCAGTGCCAGGAGAAATCACAGTTTGTaGCCAGACAAACGTGGCTTC +
Preference number: 2 (lower is better)
Translates to: VTTVAVDSGYTVNRSSARRNHSL*PDKRGF
Trigger: GAAGCCACGTTTGTCTGGGCACAAACTGTGATTTCT...CCTGGCACTGCTTCTGTTGACAGTGTAGCCACTGTCCACTGCCACTGTGGTGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000025484.9
ENSMUST00000235215.2
ENSMUST00000235766.3
ENSMUST00000235947.2
ENSMUST00000236586.3
ENSMUST00000237502.2
3UTR-3UTR GCA 90 bp TGTATGTCTGTGATGCTAACTAGCGCCCAGGAAACGGGAGCGGGAGGCACACTGAGAAATCACAGTTTGTaGCCAGACAAACGTGGCTTC +
Preference number: 2 (lower is better)
Translates to: CMSVMLTSAQETGAGGTLRNHSL*PDKRGF
Trigger: GAAGCCACGTTTGTCTGGGCACAAACTGTGATTTCT...CAGTGTGCCTCCCGCTCCCGTTTCCTGGGCGCTAGTTAGCATCACAGACATACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000025484.9
ENSMUST00000235215.2
ENSMUST00000235766.3
ENSMUST00000235947.2
ENSMUST00000236586.3
ENSMUST00000237358.2
ENSMUST00000237502.2
ENSMUST00000237680.2
3UTR-3UTR GCA 90 bp AAAACACAGGCAAGAGAGAAATCACAGTTTGTGCCCAGACAAACGTGGCTTCTGGACTGGATGTGGGAGTaGACCAGATCAGCCAGGGCC +
Preference number: 2 (lower is better)
Translates to: KTQAREKSQFVPRQTWLLDWMWE*TRSARA
Trigger: GGCCCTGGCTGATCTGGTGCACTCCCACATCCAGTC...CAGAAGCCACGTTTGTCTGGGCACAAACTGTGATTTCTCTCTTGCCTGTGTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000235215.2
ENSMUST00000235947.2
ENSMUST00000237502.2
ENSMUST00000237680.2
3UTR-3UTR GCA 90 bp GTCTGGAGGCTGCACATCTGCAAATCCCACGGGTCCTCAGGCAGGGTCACAGCTTTTGGCGATGAATGGTaGCAGCTTACTAAATCATTG +
Preference number: 2 (lower is better)
Translates to: VWRLHICKSHGSSGRVTAFGDEW*QLTKSL
Trigger: CAATGATTTAGTAAGCTGGCACCATTCATCGCCAAA...AGCTGTGACCCTGCCTGAGGACCCGTGGGATTTGCAGATGTGCAGCCTCCAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235215.2
3UTR-3UTR CCA 90 bp CCACAGTGGCAGTGGACAGTGGCTACACTGTCAACAGAAGCAGTGCCAGGTGACTGTGAAACTCATTCCTaGGATGTCCCAGTAGACAGA +
Preference number: 2 (lower is better)
Translates to: PQWQWTVATLSTEAVPGDCETHS*DVPVDR
Trigger: TCTGTCTACTGGGACATCCCAGGAATGAGTTTCACA...GTCACCTGGCACTGCTTCTGTTGACAGTGTAGCCACTGTCCACTGCCACTGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000025484.9
ENSMUST00000235215.2
ENSMUST00000235766.3
ENSMUST00000235947.2
ENSMUST00000236586.3
ENSMUST00000237502.2
3UTR-3UTR CCA 90 bp GCAAATCCCACGGGTCCTCAGGCAGGGTCACAGCTGTTGGCTGGTGAAGAAGGAGGCCTTGGAGAACAATaGATTTCCATTAAGAGACTC +
Preference number: 2 (lower is better)
Translates to: ANPTGPQAGSQLLAGEEGGLGEQ*ISIKRL
Trigger: GAGTCTCTTAATGGAAATCCATTGTTCTCCAAGGCC...TCCTTCTTCACCAGCCAACAGCTGTGACCCTGCCTGAGGACCCGTGGGATTTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000235215.2
ENSMUST00000235947.2
ENSMUST00000237680.2
3UTR-3UTR CCA 90 bp CAATGTTGTATGTCTGTGATGCTAACTAGCGCCCAGGAAACGGGAGCGGGAGGCGATCAGCCAGGGCCTTaGAGAACAATGGATTTCCAT +
Preference number: 2 (lower is better)
Translates to: QCCMSVMLTSAQETGAGGDQPGP*RTMDFH
Trigger: ATGGAAATCCATTGTTCTCCAAGGCCCTGGCTGATC...GCCTCCCGCTCCCGTTTCCTGGGCGCTAGTTAGCATCACAGACATACAACATTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000235215.2
ENSMUST00000235947.2
ENSMUST00000237680.2
3UTR-3UTR CCA 90 bp GTCCAGGAAGAGCCTCTGAAGAAAGTCTTGAACTTCTCCAAGGGTTTCGGGGCCGAGCTTGGGGTTTGGTaGTCTTGGCATGATGTACCT +
Preference number: 2 (lower is better)
Translates to: VQEEPLKKVLNFSKGFGAELGVW*SWHDVP
Trigger: AGGTACATCATGCCAAGACCACCAAACCCCAAGCTC...GGCCCCGAAACCCTTGGAGAAGTTCAAGACTTTCTTCAGAGGCTCTTCCTGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000238149.2
3UTR-3UTR TCA 90 bp AACACAGGCAAGAGAGAAATCACAGTTTGTGCCCAGACAAACGTGGCTTCTGTCATGCAGGTGAGCACATaGTCCCAAGCTGTGCGCTCA +
Preference number: 2 (lower is better)
Translates to: NTGKREITVCAQTNVASVMQVST*SQAVRS
Trigger: TGAGCGCACAGCTTGGGATCATGTGCTCACCTGCAT...GACAGAAGCCACGTTTGTCTGGGCACAAACTGTGATTTCTCTCTTGCCTGTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000025484.9
ENSMUST00000235215.2
ENSMUST00000235766.3
ENSMUST00000235947.2
ENSMUST00000236586.3
ENSMUST00000237502.2
3UTR-3UTR TCA 90 bp CACTTGAGAGTATTCAATATCCAGTTCGTAGAGCGTCTCAATGTGGTCACTGGTAGGGGTCCCCTCTGTTaGCAACAGACATCGGCAGGG +
Preference number: 2 (lower is better)
Translates to: HLRVFNIQFVERLNVVTGRGPLC*QQTSAG
Trigger: CCCTGCCGATGTCTGTTGTCAACAGAGGGGACCCCT...ACCAGTGACCACATTGAGACGCTCTACGAACTGGATATTGAATACTCTCAAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000235215.2
ENSMUST00000237680.2
3UTR-3UTR TCA 90 bp AGGGGACTGGGGGAAGGGATAATGGCTGTGTGCATAGCTGTCTGCCAACAGGAGGAGGGGAAAGGAGGTTaGTATGATGAAATATGTTGG +
Preference number: 2 (lower is better)
Translates to: RGLGEGIMAVCIAVCQQEEGKGG*YDEICW
Trigger: CCAACATATTTCATCATATCAACCTCCTTTCCCCTC...CTCCTGTTGGCAGACAGCTATGCACACAGCCATTATCCCTTCCCCCAGTCCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000235766.3
ENSMUST00000236586.3
3UTR-3UTR TCA 90 bp CTAAGAAGGGGCAAAGTGTCCACACTTTGGTCTTCGTTCTTCTTGAGTTTCATGACGACAGCAGTGGGGTaGACATTCCCAGCACCCGCA +
Preference number: 2 (lower is better)
Translates to: LRRGKVSTLWSSFFLSFMTTAVG*TFPAPA
Trigger: TGCGGGTGCTGGGAATGTTCACCCCACTGCTGTCGT...CATGAAACTCAAGAAGAACGAAGACCAAAGTGTGGACACTTTGCCCCTTCTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000235766.3
ENSMUST00000236586.3
3UTR-3UTR GCA 90 bp CACCACAGTGGCAGTGGACAGTGGCTACACTGTCAACAGAAGCAGTGCCAGGTGGTGGTCACTGGTAAATaGTATTGGAACCAAGAGGAT +
Preference number: 2 (lower is better)
Translates to: HHSGSGQWLHCQQKQCQVVVTGK*YWNQED
Trigger: ATCCTCTTGGTTCCAATAGCATTTACCAGTGACCAC...CACCTGGCACTGCTTCTGTTGACAGTGTAGCCACTGTCCACTGCCACTGTGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000235215.2
ENSMUST00000235947.2
3UTR-3UTR GCA 90 bp GTTCTCAGCTCCACACTTCTGAGCCAACACTTGAGAGTATTCAATATCCAGTTCGACTGGATGTGGGAGTaGACCAGATCAGCCAGGGCC +
Preference number: 2 (lower is better)
Translates to: VLSSTLLSQHLRVFNIQFDWMWE*TRSARA
Trigger: GGCCCTGGCTGATCTGGTGCACTCCCACATCCAGTC...GAACTGGATATTGAATACTCTCAAGTGTTGGCTCAGAAGTGTGGAGCTGAGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000235215.2
ENSMUST00000235947.2
ENSMUST00000237680.2
3UTR-3UTR GCA 90 bp CACAGGCAAGAGAGAAATCACAGTTTGTGCCCAGACAAACGTGGCTTCTGTCCCAAATGGCATTTAAGCTaGTGCCTGTGGTGGAGCAGC +
Preference number: 2 (lower is better)
Translates to: HRQERNHSLCPDKRGFCPKWHLS*CLWWSS
Trigger: GCTGCTCCACCACAGGCAGCAGCTTAAATGCCATTT...GGGACAGAAGCCACGTTTGTCTGGGCACAAACTGTGATTTCTCTCTTGCCTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000235215.2
ENSMUST00000237680.2
3UTR-3UTR GCA 90 bp CAAGGAACACAATGTTGTATGTCTGTGATGCTAACTAGCGCCCAGGAAACGGGAGAGACTGGGGCTACCTaGAGGAGAAAGGAGCAGAGA +
Preference number: 2 (lower is better)
Translates to: QGTQCCMSVMLTSAQETGETGAT*RRKEQR
Trigger: TCTCTGCTCCTTTCTCCTGCAGGTAGCCCCAGTCTC...TCCCGTTTCCTGGGCGCTAGTTAGCATCACAGACATACAACATTGTGTTCCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000237502.2
3UTR-3UTR CCA 90 bp AAAACACAGGCAAGAGAGAAATCACAGTTTGTGCCCAGACAAACGTGGCTTCTGCCCACCGCAGGTGTCTaGAGGCTGCACATCTGCAAA +
Preference number: 2 (lower is better)
Translates to: KTQAREKSQFVPRQTWLLPTAGV*RLHICK
Trigger: TTTGCAGATGTGCAGCCTCCAGACACCTGCGGTGGG...CAGAAGCCACGTTTGTCTGGGCACAAACTGTGATTTCTCTCTTGCCTGTGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000025484.9
ENSMUST00000235215.2
ENSMUST00000235766.3
ENSMUST00000235947.2
ENSMUST00000236586.3
ENSMUST00000237358.2
ENSMUST00000237502.2
ENSMUST00000237680.2
3UTR-3UTR CCA 90 bp CAATGTTGTATGTCTGTGATGCTAACTAGCGCCCAGGAAACGGGAGCGGGAGGCTGTGAAACTCATTCCTaGGATGTCCCAGTAGACAGA +
Preference number: 2 (lower is better)
Translates to: QCCMSVMLTSAQETGAGGCETHS*DVPVDR
Trigger: TCTGTCTACTGGGACATCCCAGGAATGAGTTTCACA...GCCTCCCGCTCCCGTTTCCTGGGCGCTAGTTAGCATCACAGACATACAACATTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000025484.9
ENSMUST00000235215.2
ENSMUST00000235766.3
ENSMUST00000235947.2
ENSMUST00000236586.3
ENSMUST00000237502.2
ENSMUST00000237680.2
3UTR-3UTR CCA 90 bp ATGAGACTCTTGCAGTCACCACAGTGGCAGTGGACAGTGGCTACACTGTCAACAACTGCTCTTGAATTTTaGGGGTTCGGCGTTTGGCGA +
Preference number: 2 (lower is better)
Translates to: MRLLQSPQWQWTVATLSTTALEF*GFGVWR
Trigger: TCGCCAAACGCCGAACCCCCAAAATTCAAGAGCAGT...TGTTGACAGTGTAGCCACTGTCCACTGCCACTGTGGTGACTGCAAGAGTCTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000235215.2
3UTR-3UTR CCA 90 bp AACACAGGCAAGAGAGAAATCACAGTTTGTGCCCAGACAAACGTGGCTTCTGTCTGGTGGCACTGTCCCTaGAGACAGGAAGAAGGCAGA +
Preference number: 2 (lower is better)
Translates to: NTGKREITVCAQTNVASVWWHCP*RQEEGR
Trigger: TCTGCCTTCTTCCTGTCTCCAGGGACAGTGCCACCA...GACAGAAGCCACGTTTGTCTGGGCACAAACTGTGATTTCTCTCTTGCCTGTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000235766.3
ENSMUST00000236586.3
3UTR CAA 90 bp CCTGTGTTCCATCCAATAGCTGACTGTGAGCATCCACTTCTGTGTTaGCTAGGCCCCGGCATAGTCTCACAAGAGACAGCTATATCAGAG +
Preference number: 2 (lower is better)
Translates to: PVFHPIADCEHPLLC*LGPGIVSQETAISE
Trigger: CTCTGATATAGCTGTCTCTTGTGAGACTATGCCGGGGCCTAGCAAACACAGAAGTGGATGCTCACAGTCAGCTATTGGATGGAACACAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000235766.3
ENSMUST00000236586.3
3UTR-3UTR GCA 90 bp TCTATCCTCCAAGGAACACAATGTTGTATGTCTGTGATGCTAACTAGCGCCCAGTGGAGGCTGCACATCTaGAAATCCCACGGGTCCTCA +
Preference number: 2 (lower is better)
Translates to: SILQGTQCCMSVMLTSAQWRLHI*KSHGSS
Trigger: TGAGGACCCGTGGGATTTGCAGATGTGCAGCCTCCA...CTGGGCGCTAGTTAGCATCACAGACATACAACATTGTGTTCCTTGGAGGATAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000025484.9
ENSMUST00000235215.2
ENSMUST00000235766.3
ENSMUST00000235947.2
ENSMUST00000236586.3
ENSMUST00000237358.2
ENSMUST00000237502.2
ENSMUST00000237680.2
3UTR-3UTR GCA 90 bp CTGGATGTGGGAGTGCACCAGATCAGCCAGGGCCTTGGAGAACAATGGATTTCCATCCACCTCCGATTCTaGGATACTGCTCTTGAATTT +
Preference number: 2 (lower is better)
Translates to: LDVGVHQISQGLGEQWISIHLRF*DTALEF
Trigger: AAATTCAAGAGCAGTATCGCAGAATCGGAGGTGGAT...GGAAATCCATTGTTCTCCAAGGCCCTGGCTGATCTGGTGCACTCCCACATCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000235215.2
ENSMUST00000237680.2
3UTR-3UTR CCA 90 bp AACACAGGCAAGAGAGAAATCACAGTTTGTGCCCAGACAAACGTGGCTTCTGTCTCACCACAGTGGCAGTaGACAGTGGCTACACTGTCA +
Preference number: 2 (lower is better)
Translates to: NTGKREITVCAQTNVASVSPQWQ*TVATLS
Trigger: TGACAGTGTAGCCACTGTCCACTGCCACTGTGGTGA...GACAGAAGCCACGTTTGTCTGGGCACAAACTGTGATTTCTCTCTTGCCTGTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000025484.9
ENSMUST00000235215.2
ENSMUST00000235766.3
ENSMUST00000235947.2
ENSMUST00000236586.3
ENSMUST00000237502.2
3UTR-3UTR CCA 90 bp CTGAGCCAACACTTGAGAGTATTCAATATCCAGTTCGTAGAGCGTCTCAATGTGTGCTCCACTTCATGGTaGGCTTCTGGCCCACCTCGT +
Preference number: 2 (lower is better)
Translates to: LSQHLRVFNIQFVERLNVCSTSW*ASGPPR
Trigger: ACGAGGTGGGCCAGAAGCCCACCATGAAGTGGAGCA...CACATTGAGACGCTCTACGAACTGGATATTGAATACTCTCAAGTGTTGGCTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000235215.2
ENSMUST00000237680.2
3UTR CAA 90 bp TCATATTGTTGTTCCACCTATAAGGTTGCAGACCCCTTTAGCTCCTaGGATACTTTCTCTAGCTCCTCCGTTGGGGGCCCTGTGTTCCAT +
Preference number: 2 (lower is better)
Translates to: SYCCSTYKVADPFSS*DTFSSSSVGGPVFH
Trigger: ATGGAACACAGGGCCCCCAACGGAGGAGCTAGAGAAAGTATCCAAGGAGCTAAAGGGGTCTGCAACCTTATAGGTGGAACAACAATATGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000235766.3
ENSMUST00000236586.3
3UTR-3UTR TCA 90 bp CTAAGAAGGGGCAAAGTGTCCACACTTTGGTCTTCGTTCTTCTTGAGTTTCATGATGCAGGTGAGCACATaGTCCCAAGCTGTGCGCTCA +
Preference number: 2 (lower is better)
Translates to: LRRGKVSTLWSSFFLSFMMQVST*SQAVRS
Trigger: TGAGCGCACAGCTTGGGATCATGTGCTCACCTGCAT...CATGAAACTCAAGAAGAACGAAGACCAAAGTGTGGACACTTTGCCCCTTCTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000235766.3
ENSMUST00000236586.3
3UTR-3UTR TCA 90 bp CACTTGAGAGTATTCAATATCCAGTTCGTAGAGCGTCTCAATGTGGTCACTGGTATAGCCTCATCTGTCTaGGGGCCCAACCAGGGTACT +
Preference number: 2 (lower is better)
Translates to: HLRVFNIQFVERLNVVTGIASSV*GPNQGT
Trigger: AGTACCCTGGTTGGGCCCTCAGACAGATGAGGCTAT...ACCAGTGACCACATTGAGACGCTCTACGAACTGGATATTGAATACTCTCAAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000235215.2
ENSMUST00000237680.2
3UTR-3UTR GCA 90 bp ATAAAACACAGGCAAGAGAGAAATCACAGTTTGTGCCCAGACAAACGTGGCTTCCAGGTGTCTGGAGGCTaGACATCTGCAAATCCCACG +
Preference number: 2 (lower is better)
Translates to: IKHRQERNHSLCPDKRGFQVSGG*TSANPT
Trigger: CGTGGGATTTGCAGATGTGCAGCCTCCAGACACCTG...GAAGCCACGTTTGTCTGGGCACAAACTGTGATTTCTCTCTTGCCTGTGTTTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000025484.9
ENSMUST00000235215.2
ENSMUST00000235766.3
ENSMUST00000235947.2
ENSMUST00000236586.3
ENSMUST00000237358.2
ENSMUST00000237502.2
ENSMUST00000237680.2
3UTR-3UTR GCA 90 bp TCGTGTTTTGTGTTTGATGCAGGTGAGCACATGATCCCAAGCTGTGCGCTCAGCAGAAATCACAGTTTGTaGCCAGACAAACGTGGCTTC +
Preference number: 2 (lower is better)
Translates to: SCFVFDAGEHMIPSCALSRNHSL*PDKRGF
Trigger: GAAGCCACGTTTGTCTGGGCACAAACTGTGATTTCT...GCTGAGCGCACAGCTTGGGATCATGTGCTCACCTGCATCAAACACAAAACACGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000025484.9
ENSMUST00000235215.2
ENSMUST00000235766.3
ENSMUST00000235947.2
ENSMUST00000236586.3
ENSMUST00000237502.2
3UTR-3UTR GCA 90 bp TGTCTCTGTAACTCCGTCCATGGGTGTTTTGTTCCCAATTCTAAGAAGGGGCAATGTCAACAGAAGCAGTaGCAGGTGACCGCTCCAACT +
Preference number: 2 (lower is better)
Translates to: CLCNSVHGCFVPNSKKGQCQQKQ*QVTAPT
Trigger: AGTTGGAGCGGTCACCTGGCACTGCTTCTGTTGACA...TTGCCCCTTCTTAGAATTGGGAACAAAACACCCATGGACGGAGTTACAGAGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000235766.3
ENSMUST00000236586.3
3UTR-3UTR CCA 90 bp GGAACACAATGTTGTATGTCTGTGATGCTAACTAGCGCCCAGGAAACGGGAGCGTGTGAAACTCATTCCTaGGATGTCCCAGTAGACAGA +
Preference number: 2 (lower is better)
Translates to: GTQCCMSVMLTSAQETGACETHS*DVPVDR
Trigger: TCTGTCTACTGGGACATCCCAGGAATGAGTTTCACA...CGCTCCCGTTTCCTGGGCGCTAGTTAGCATCACAGACATACAACATTGTGTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000025484.9
ENSMUST00000235215.2
ENSMUST00000235766.3
ENSMUST00000235947.2
ENSMUST00000236586.3
ENSMUST00000237502.2
ENSMUST00000237680.2
3UTR-3UTR CCA 90 bp AGGCAAGAGAGAAATCACAGTTTGTGCCCAGACAAACGTGGCTTCTGTCCCCATCAGGGTCACAGCTGTTaGCTGGTGAAGAAGGATTTA +
Preference number: 2 (lower is better)
Translates to: RQERNHSLCPDKRGFCPHQGHSC*LVKKDL
Trigger: TAAATCCTTCTTCACCAGCCAACAGCTGTGACCCTG...ATGGGGACAGAAGCCACGTTTGTCTGGGCACAAACTGTGATTTCTCTCTTGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000235215.2
ENSMUST00000235766.3
ENSMUST00000235947.2
ENSMUST00000237502.2
ENSMUST00000237680.2
3UTR-3UTR CCA 90 bp GCACTCTTGAAACATGCACTTGTTTCAGTTTCCAGGGAGGGAGATGAGACTCTTGACATCGGCAGGGAGTaGGCAGAAAACAGAATGACC +
Preference number: 2 (lower is better)
Translates to: ALLKHALVSVSREGDETLDIGRE*AENRMT
Trigger: GGTCATTCTGTTTTCTGCCCACTCCCTGCCGATGTC...AAGAGTCTCATCTCCCTCCCTGGAAACTGAAACAAGTGCATGTTTCAAGAGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235215.2
3UTR-3UTR CCA 90 bp CTGAGCCAACACTTGAGAGTATTCAATATCCAGTTCGTAGAGCGTCTCAATGTGCCAGTCGGTAGGGGTTaGGGTAACCCAGCTTTTCCA +
Preference number: 2 (lower is better)
Translates to: LSQHLRVFNIQFVERLNVPVGRG*GNPAFP
Trigger: TGGAAAAGCTGGGTTACCCCAACCCCTACCGACTGG...CACATTGAGACGCTCTACGAACTGGATATTGAATACTCTCAAGTGTTGGCTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000235215.2
ENSMUST00000237680.2
3UTR-3UTR GCA 90 bp GAACACATCAAAACAATCATCCATCCTGACCAAGTAGGTTTCATTCCAGGGATGCAGGTGTCTGGAGGCTaGACATCTGCAAATCCCACG +
Preference number: 2 (lower is better)
Translates to: EHIKTIIHPDQVGFIPGMQVSGG*TSANPT
Trigger: CGTGGGATTTGCAGATGTGCAGCCTCCAGACACCTG...CATCCCTGGAATGAAACCTACTTGGTCAGGATGGATGATTGTTTTGATGTGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000235766.3
ENSMUST00000236586.3
3UTR-3UTR GCA 90 bp ATTCTAAGAAGGGGCAAAGTGTCCACACTTTGGTCTTCGTTCTTCTTGAGTTTCAGTGCTTCCCGTAAGTaGCTCTCAGAGGCCAGTCTG +
Preference number: 2 (lower is better)
Translates to: ILRRGKVSTLWSSFFLSFSASRK*LSEASL
Trigger: CAGACTGGCCTCTGAGAGGCACTTACGGGAAGCACT...GAAACTCAAGAAGAACGAAGACCAAAGTGTGGACACTTTGCCCCTTCTTAGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000235766.3
ENSMUST00000236586.3
3UTR-3UTR CCA 90 bp ATTAGGCTATGCGCCCGGGGAATCTTAGCACTCTTGAAACATGCACTTGTTTCAAGTGGCAGTGGACAGTaGCTACACTGTCAACAGAAG +
Preference number: 2 (lower is better)
Translates to: IRLCARGILALLKHALVSSGSGQ*LHCQQK
Trigger: CTTCTGTTGACAGTGTAGCCACTGTCCACTGCCACT...TGAAACAAGTGCATGTTTCAAGAGTGCTAAGATTCCCCGGGCGCATAGCCTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000025484.9
ENSMUST00000235215.2
ENSMUST00000235766.3
ENSMUST00000235947.2
ENSMUST00000236586.3
ENSMUST00000237502.2
3UTR-3UTR CCA 90 bp TTGAGAGTATTCAATATCCAGTTCGTAGAGCGTCTCAATGTGGTCACTGGTAAATGCTCCACTTCATGGTaGGCTTCTGGCCCACCTCGT +
Preference number: 2 (lower is better)
Translates to: LRVFNIQFVERLNVVTGKCSTSW*ASGPPR
Trigger: ACGAGGTGGGCCAGAAGCCCACCATGAAGTGGAGCA...TTTACCAGTGACCACATTGAGACGCTCTACGAACTGGATATTGAATACTCTCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000235215.2
ENSMUST00000237680.2
3UTR CAA 90 bp GTCTCAGCTCCAAACTTTGTCTCTGTAACTCCGTCCATGGGTGTTTaGTTCCCAATTCTAAGAAGGGGCAAAGTGTCCACACTTTGGTCT +
Preference number: 2 (lower is better)
Translates to: VSAPNFVSVTPSMGV*FPILRRGKVSTLWS
Trigger: AGACCAAAGTGTGGACACTTTGCCCCTTCTTAGAATTGGGAACAAAACACCCATGGACGGAGTTACAGAGACAAAGTTTGGAGCTGAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000235766.3
ENSMUST00000236586.3
3UTR CAA 90 bp TCTGGAGGGTACTGGTTAGTTCATATTGTTGTTCCACCTATAAGGTaGCAGACCCCTTTAGCTCCTTGGATACTTTCTCTAGCTCCTCCG +
Preference number: 2 (lower is better)
Translates to: SGGYWLVHIVVPPIR*QTPLAPWILSLAPP
Trigger: CGGAGGAGCTAGAGAAAGTATCCAAGGAGCTAAAGGGGTCTGCAACCTTATAGGTGGAACAACAATATGAACTAACCAGTACCCTCCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000235766.3
ENSMUST00000236586.3
3UTR-3UTR GCA 90 bp TTGAGAGTATTCAATATCCAGTTCGTAGAGCGTCTCAATGTGGTCACTGGTAAATGGAGGCTGCACATCTaGAAATCCCACGGGTCCTCA +
Preference number: 2 (lower is better)
Translates to: LRVFNIQFVERLNVVTGKWRLHI*KSHGSS
Trigger: TGAGGACCCGTGGGATTTGCAGATGTGCAGCCTCCA...TTTACCAGTGACCACATTGAGACGCTCTACGAACTGGATATTGAATACTCTCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000235215.2
ENSMUST00000235947.2
ENSMUST00000237680.2
3UTR-3UTR GCA 90 bp CAAGGAACACAATGTTGTATGTCTGTGATGCTAACTAGCGCCCAGGAAACGGGAAGAAATCACAGTTTGTaGCCAGACAAACGTGGCTTC +
Preference number: 2 (lower is better)
Translates to: QGTQCCMSVMLTSAQETGRNHSL*PDKRGF
Trigger: GAAGCCACGTTTGTCTGGGCACAAACTGTGATTTCT...TCCCGTTTCCTGGGCGCTAGTTAGCATCACAGACATACAACATTGTGTTCCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000025484.9
ENSMUST00000235215.2
ENSMUST00000235766.3
ENSMUST00000235947.2
ENSMUST00000236586.3
ENSMUST00000237358.2
ENSMUST00000237502.2
ENSMUST00000237680.2
3UTR-3UTR GCA 90 bp AACACAGGCAAGAGAGAAATCACAGTTTGTGCCCAGACAAACGTGGCTTCTGTCAGAAATCACAGTTTGTaGCCAGACAAACGTGGCTTC +
Preference number: 2 (lower is better)
Translates to: NTGKREITVCAQTNVASVRNHSL*PDKRGF
Trigger: GAAGCCACGTTTGTCTGGGCACAAACTGTGATTTCT...GACAGAAGCCACGTTTGTCTGGGCACAAACTGTGATTTCTCTCTTGCCTGTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000025484.9
ENSMUST00000235215.2
ENSMUST00000235766.3
ENSMUST00000235947.2
ENSMUST00000236586.3
ENSMUST00000237358.2
ENSMUST00000237502.2
ENSMUST00000237680.2
3UTR-3UTR GCA 90 bp CTTGTTTCAGTTTCCAGGGAGGGAGATGAGACTCTTGCAGTCACCACAGTGGCAAGAAGTGTAAAACACTaGCCATTCTGGACATCATCA +
Preference number: 2 (lower is better)
Translates to: LVSVSREGDETLAVTTVARSVKH*PFWTSS
Trigger: TGATGATGTCCAGAATGGGCAGTGTTTTACACTTCT...TGCCACTGTGGTGACTGCAAGAGTCTCATCTCCCTCCCTGGAAACTGAAACAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000237502.2
3UTR-3UTR CCA 90 bp AATTTCGAGTCTATCCTCCAAGGAACACAATGTTGTATGTCTGTGATGCTAACTGAGCGGGAGGCACACTaGAAGCCAGTTTGGCCTACA +
Preference number: 2 (lower is better)
Translates to: NFESILQGTQCCMSVMLTEREAH*KPVWPT
Trigger: TGTAGGCCAAACTGGCTTCCAGTGTGCCTCCCGCTC...AGTTAGCATCACAGACATACAACATTGTGTTCCTTGGAGGATAGACTCGAAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000025484.9
ENSMUST00000235215.2
ENSMUST00000235766.3
ENSMUST00000235947.2
ENSMUST00000236586.3
ENSMUST00000237358.2
ENSMUST00000237502.2
ENSMUST00000237680.2
3UTR-3UTR CCA 90 bp GACAGACAGGATAACAACTCTCAAAGACTCATCAATGCTAAAAGATCCCCGTCCAGTGGCAGTGGACAGTaGCTACACTGTCAACAGAAG +
Preference number: 2 (lower is better)
Translates to: DRQDNNSQRLINAKRSPSSGSGQ*LHCQQK
Trigger: CTTCTGTTGACAGTGTAGCCACTGTCCACTGCCACT...GGACGGGGATCTTTTAGCATTGATGAGTCTTTGAGAGTTGTTATCCTGTCTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000235766.3
ENSMUST00000236586.3
3UTR-3UTR CCA 90 bp GTTCTCAGCTCCACACTTCTGAGCCAACACTTGAGAGTATTCAATATCCAGTTCACTGCTCTTGAATTTTaGGGGTTCGGCGTTTGGCGA +
Preference number: 2 (lower is better)
Translates to: VLSSTLLSQHLRVFNIQFTALEF*GFGVWR
Trigger: TCGCCAAACGCCGAACCCCCAAAATTCAAGAGCAGT...GAACTGGATATTGAATACTCTCAAGTGTTGGCTCAGAAGTGTGGAGCTGAGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000235215.2
ENSMUST00000237680.2
3UTR-3UTR CCA 90 bp CAAGGAACACAATGTTGTATGTCTGTGATGCTAACTAGCGCCCAGGAAACGGGAGCGTTTGGCGATGAATaGTGCCAGCTTACTAAATCA +
Preference number: 2 (lower is better)
Translates to: QGTQCCMSVMLTSAQETGAFGDE*CQLTKS
Trigger: TGATTTAGTAAGCTGGCACCATTCATCGCCAAACGC...TCCCGTTTCCTGGGCGCTAGTTAGCATCACAGACATACAACATTGTGTTCCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235215.2
3UTR-3UTR GCA 90 bp GCACTCTTGAAACATGCACTTGTTTCAGTTTCCAGGGAGGGAGATGAGACTCTTAGAAATCACAGTTTGTaGCCAGACAAACGTGGCTTC +
Preference number: 2 (lower is better)
Translates to: ALLKHALVSVSREGDETLRNHSL*PDKRGF
Trigger: GAAGCCACGTTTGTCTGGGCACAAACTGTGATTTCT...AAGAGTCTCATCTCCCTCCCTGGAAACTGAAACAAGTGCATGTTTCAAGAGTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000025484.9
ENSMUST00000235215.2
ENSMUST00000235766.3
ENSMUST00000235947.2
ENSMUST00000236586.3
ENSMUST00000237502.2
3UTR-3UTR GCA 90 bp AACACAGGCAAGAGAGAAATCACAGTTTGTGCCCAGACAAACGTGGCTTCTGTCGTGGTCACTGGTAAATaGTATTGGAACCAAGAGGAT +
Preference number: 2 (lower is better)
Translates to: NTGKREITVCAQTNVASVVVTGK*YWNQED
Trigger: ATCCTCTTGGTTCCAATAGCATTTACCAGTGACCAC...GACAGAAGCCACGTTTGTCTGGGCACAAACTGTGATTTCTCTCTTGCCTGTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000235215.2
ENSMUST00000235947.2
ENSMUST00000237680.2
3UTR-3UTR GCA 90 bp TGTACCACATTTTCTGTATCCATTCTTCTGTTGAGGGACATCTGGGTTCTTTCCGAGGCCAGAGACTACTaGATGCTTGTCTTAGTCTCG +
Preference number: 2 (lower is better)
Translates to: CTTFSVSILLLRDIWVLSEARDY*MLVLVS
Trigger: CGAGACTAAGACAAGCATGCAGTAGTCTCTGGCCTC...GGAAAGAACCCAGATGTCCCTCAACAGAAGAATGGATACAGAAAATGTGGTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000235766.3
ENSMUST00000236586.3
3UTR-3UTR GCA 90 bp AACTGTGAAACTCATTCCTGGGATGTCCCAGTAGACAGATATTCCATATTGATAGTCAAGGGCCCTCCCTaGAAGTATTCCCTGAGCTTG +
Preference number: 2 (lower is better)
Translates to: NCETHSWDVPVDRYSILIVKGPP*KYSLSL
Trigger: CAAGCTCAGGGAATACTTGCAGGGAGGGCCCTTGAC...TATCAATATGGAATATCTGTCTACTGGGACATCCCAGGAATGAGTTTCACAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237502.2
3UTR-3UTR CCA 90 bp CACTTGAGAGTATTCAATATCCAGTTCGTAGAGCGTCTCAATGTGGTCACTGGTGATCAGCCAGGGCCTTaGAGAACAATGGATTTCCAT +
Preference number: 2 (lower is better)
Translates to: HLRVFNIQFVERLNVVTGDQPGP*RTMDFH
Trigger: ATGGAAATCCATTGTTCTCCAAGGCCCTGGCTGATC...ACCAGTGACCACATTGAGACGCTCTACGAACTGGATATTGAATACTCTCAAGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000235215.2
ENSMUST00000235947.2
ENSMUST00000237680.2
3UTR-3UTR TCA 90 bp AATTTCGAGTCTATCCTCCAAGGAACACAATGTTGTATGTCTGTGATGCTAACTCTGCGATACTGCTCTTaGATTTTGGGGGTTCGGCGT +
Preference number: 2 (lower is better)
Translates to: NFESILQGTQCCMSVMLTLRYCS*ILGVRR
Trigger: ACGCCGAACCCCCAAAATTCAAGAGCAGTATCGCAG...AGTTAGCATCACAGACATACAACATTGTGTTCCTTGGAGGATAGACTCGAAATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000235215.2
ENSMUST00000237680.2
3UTR-3UTR TCA 90 bp CTAAGAAGGGGCAAAGTGTCCACACTTTGGTCTTCGTTCTTCTTGAGTTTCATGGCCAATGTTTTCATCTaGAAAGCTGCTCAAGAGCCA +
Preference number: 2 (lower is better)
Translates to: LRRGKVSTLWSSFFLSFMANVFI*KAAQEP
Trigger: TGGCTCTTGAGCAGCTTTTCAGATGAAAACATTGGC...CATGAAACTCAAGAAGAACGAAGACCAAAGTGTGGACACTTTGCCCCTTCTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000235766.3
ENSMUST00000236586.3
3UTR-3UTR TCA 90 bp TGTCTCTGTAACTCCGTCCATGGGTGTTTTGTTCCCAATTCTAAGAAGGGGCAAGCATCTGCTGTCACCTaGATTGTAATTCCAGTTCTT +
Preference number: 2 (lower is better)
Translates to: CLCNSVHGCFVPNSKKGQASAVT*IVIPVL
Trigger: AAGAACTGGAATTACAATTCAGGTGACAGCAGATGC...TTGCCCCTTCTTAGAATTGGGAACAAAACACCCATGGACGGAGTTACAGAGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000235766.3
ENSMUST00000236586.3
3UTR-3UTR GCA 90 bp TTCACTGCTAATTACAATGACAAACATTTGTACTTCACAGCTGACAGACAGGATTGGAGGCTGCACATCTaGAAATCCCACGGGTCCTCA +
Preference number: 2 (lower is better)
Translates to: FTANYNDKHLYFTADRQDWRLHI*KSHGSS
Trigger: TGAGGACCCGTGGGATTTGCAGATGTGCAGCCTCCA...ATCCTGTCTGTCAGCTGTGAAGTACAAATGTTTGTCATTGTAATTAGCAGTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000235766.3
ENSMUST00000236586.3
3UTR-3UTR GCA 90 bp AAGAATTTCGAGTCTATCCTCCAAGGAACACAATGTTGTATGTCTGTGATGCTATGTCAACAGAAGCAGTaGCAGGTGACCGCTCCAACT +
Preference number: 2 (lower is better)
Translates to: KNFESILQGTQCCMSVMLCQQKQ*QVTAPT
Trigger: AGTTGGAGCGGTCACCTGGCACTGCTTCTGTTGACA...TAGCATCACAGACATACAACATTGTGTTCCTTGGAGGATAGACTCGAAATTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000025484.9
ENSMUST00000235215.2
ENSMUST00000235766.3
ENSMUST00000235947.2
ENSMUST00000236586.3
ENSMUST00000237502.2
3UTR-3UTR CCA 90 bp TTCCTGGGATGTCCCAGTAGACAGATATTCCATATTGATAAATTGACCCCAGGAGATCAGCCAGGGCCTTaGAGAACAATGGATTTCCAT +
Preference number: 2 (lower is better)
Translates to: FLGCPSRQIFHIDKLTPGDQPGP*RTMDFH
Trigger: ATGGAAATCCATTGTTCTCCAAGGCCCTGGCTGATC...TCCTGGGGTCAATTTATCAATATGGAATATCTGTCTACTGGGACATCCCAGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000235215.2
ENSMUST00000235947.2
ENSMUST00000237680.2
3UTR-3UTR CCA 90 bp GGATGTCCCAGTAGACAGATATTCCATATTGATAAATTGACCCCAGGATCAGTCCAGGGTCACAGCTGTTaGCTGGTGAAGAAGGATTTA +
Preference number: 2 (lower is better)
Translates to: GCPSRQIFHIDKLTPGSVQGHSC*LVKKDL
Trigger: TAAATCCTTCTTCACCAGCCAACAGCTGTGACCCTG...GACTGATCCTGGGGTCAATTTATCAATATGGAATATCTGTCTACTGGGACATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000235215.2
ENSMUST00000235766.3
ENSMUST00000235947.2
ENSMUST00000237502.2
ENSMUST00000237680.2
3UTR-3UTR CCA 90 bp GCACTCTTGAAACATGCACTTGTTTCAGTTTCCAGGGAGGGAGATGAGACTCTTGGAGCAGCTATACTGTaGATACTGTGTGAAAGCAAT +
Preference number: 2 (lower is better)
Translates to: ALLKHALVSVSREGDETLGAAIL*ILCESN
Trigger: ATTGCTTTCACACAGTATCCACAGTATAGCTGCTCC...AAGAGTCTCATCTCCCTCCCTGGAAACTGAAACAAGTGCATGTTTCAAGAGTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235215.2
3UTR-3UTR CCA 90 bp TGTACCACATTTTCTGTATCCATTCTTCTGTTGAGGGACATCTGGGTTCTTTCCGAATCGCAGATGTGGTaGAGAGCAAGAGAGACCATA +
Preference number: 2 (lower is better)
Translates to: CTTFSVSILLLRDIWVLSESQMW*RARETI
Trigger: TATGGTCTCTCTTGCTCTCCACCACATCTGCGATTC...GGAAAGAACCCAGATGTCCCTCAACAGAAGAATGGATACAGAAAATGTGGTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000235766.3
ENSMUST00000236586.3
3UTR-3UTR CCA 90 bp CTGGTTAGTTCATATTGTTGTTCCACCTATAAGGTTGCAGACCCCTTTAGCTCCTGTGACAAAATACCCTaGCAAAAGGAAACTGTGGGG +
Preference number: 2 (lower is better)
Translates to: LVSSYCCSTYKVADPFSSCDKIP*QKETVG
Trigger: CCCCACAGTTTCCTTTTGCCAGGGTATTTTGTCACA...GGAGCTAAAGGGGTCTGCAACCTTATAGGTGGAACAACAATATGAACTAACCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000235766.3
ENSMUST00000236586.3
3UTR-3UTR TCA 90 bp CTGGTTAGTTCATATTGTTGTTCCACCTATAAGGTTGCAGACCCCTTTAGCTCCGAGGGGAAAGGAGGTTaGTATGATGAAATATGTTGG +
Preference number: 2 (lower is better)
Translates to: LVSSYCCSTYKVADPFSSEGKGG*YDEICW
Trigger: CCAACATATTTCATCATATCAACCTCCTTTCCCCTC...GGAGCTAAAGGGGTCTGCAACCTTATAGGTGGAACAACAATATGAACTAACCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000235766.3
ENSMUST00000236586.3
3UTR-3UTR TCA 90 bp CTGGTTAGTTCATATTGTTGTTCCACCTATAAGGTTGCAGACCCCTTTAGCTCCAACAATCATCCATCCTaGCCAAGTAGGTTTCATTCC +
Preference number: 2 (lower is better)
Translates to: LVSSYCCSTYKVADPFSSNNHPS*PSRFHS
Trigger: GGAATGAAACCTACTTGGTCAGGATGGATGATTGTT...GGAGCTAAAGGGGTCTGCAACCTTATAGGTGGAACAACAATATGAACTAACCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000235766.3
ENSMUST00000236586.3
3UTR-3UTR GCA 90 bp TGTACCACATTTTCTGTATCCATTCTTCTGTTGAGGGACATCTGGGTTCTTTCCGTGGTTGTACAAGCTTaGAATCTCGCCAACAATGGA +
Preference number: 2 (lower is better)
Translates to: CTTFSVSILLLRDIWVLSVVVQA*NLANNG
Trigger: TCCATTGTTGGCGAGATTGCAAGCTTGTACAACCAC...GGAAAGAACCCAGATGTCCCTCAACAGAAGAATGGATACAGAAAATGTGGTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000235766.3
ENSMUST00000236586.3
3UTR-3UTR CCA 90 bp CTGGTTAGTTCATATTGTTGTTCCACCTATAAGGTTGCAGACCCCTTTAGCTCCGGCAAAAGGAAACTGTaGGGAGAAAGGGTTTATTTG +
Preference number: 2 (lower is better)
Translates to: LVSSYCCSTYKVADPFSSGKRKL*GERVYL
Trigger: CAAATAAACCCTTTCTCCCCACAGTTTCCTTTTGCC...GGAGCTAAAGGGGTCTGCAACCTTATAGGTGGAACAACAATATGAACTAACCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000235766.3
ENSMUST00000236586.3
3UTR-3UTR TCA 90 bp ATTCTAAGAAGGGGCAAAGTGTCCACACTTTGGTCTTCGTTCTTCTTGAGTTTCTCAACTGTGGCTTCTTaGATTAAACGCCCAAAGTAT +
Preference number: 2 (lower is better)
Translates to: ILRRGKVSTLWSSFFLSFSTVAS*IKRPKY
Trigger: ATACTTTGGGCGTTTAATTCAAGAAGCCACAGTTGA...GAAACTCAAGAAGAACGAAGACCAAAGTGTGGACACTTTGCCCCTTCTTAGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000235766.3
ENSMUST00000236586.3
3UTR-3UTR GCA 90 bp GAACACATCAAAACAATCATCCATCCTGACCAAGTAGGTTTCATTCCAGGGATGTTTCATCTGAAAAGCTaGTCAAGAGCCAAGACTGAT +
Preference number: 2 (lower is better)
Translates to: EHIKTIIHPDQVGFIPGMFHLKS*SRAKTD
Trigger: ATCAGTCTTGGCTCTTGAGCAGCTTTTCAGATGAAA...CATCCCTGGAATGAAACCTACTTGGTCAGGATGGATGATTGTTTTGATGTGTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000235766.3
ENSMUST00000236586.3
3UTR-3UTR CCA 90 bp AGTTCACTGCTAATTACAATGACAAACATTTGTACTTCACAGCTGACAGACAGGTGTGAAACTCATTCCTaGGATGTCCCAGTAGACAGA +
Preference number: 2 (lower is better)
Translates to: SSLLITMTNICTSQLTDRCETHS*DVPVDR
Trigger: TCTGTCTACTGGGACATCCCAGGAATGAGTTTCACA...CCTGTCTGTCAGCTGTGAAGTACAAATGTTTGTCATTGTAATTAGCAGTGAACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000235766.3
ENSMUST00000236586.3
3UTR-3UTR CCA 90 bp TATTCTACCGCTTCAAGAGGAAGAGAGGGAAATCTATTTTCAAGATCATCTGAATGTGAAACTCATTCCTaGGATGTCCCAGTAGACAGA +
Preference number: 2 (lower is better)
Translates to: YSTASRGREGNLFSRSSECETHS*DVPVDR
Trigger: TCTGTCTACTGGGACATCCCAGGAATGAGTTTCACA...TTCAGATGATCTTGAAAATAGATTTCCCTCTCTTCCTCTTGAAGCGGTAGAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000235766.3
ENSMUST00000236586.3
3UTR CAA 90 bp TCATTCCTGGGATGTCCCAGTAGACAGATATTCCATATTGATAAATaGACCCCAGGATCAGTCACTATACTTGTATATGAAAATAGAAAT +
Preference number: 2 (lower is better)
Translates to: SFLGCPSRQIFHIDK*TPGSVTILVYENRN
Trigger: ATTTCTATTTTCATATACAAGTATAGTGACTGATCCTGGGGTCAATTTATCAATATGGAATATCTGTCTACTGGGACATCCCAGGAATGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000025484.9
ENSMUST00000235215.2
ENSMUST00000235766.3
ENSMUST00000235947.2
ENSMUST00000236586.3
ENSMUST00000237358.2
ENSMUST00000237502.2
ENSMUST00000237680.2
3UTR TCA 72 bp GCTGCCACCGCAGCACCCGACTGGCACCTCCATGGCTaGCAGGCCCTTGAGCTGCCGTGCACCAGTTACGGT +
Preference number: 3 (lower is better)
Translates to: AATAAPDWHLHG*QALELPCTSYG
Trigger: ACCGTAACTGGTGCACGGCAGCTCAAGGGCCTGTCAGCCATGGAGGTGCCAGTCGGGTGCTGCGGTGGCAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000238149.2
3UTR CCA 72 bp GTCCTTCACGCAGGTCTGCGGGAGAGCCCCTTCCCCTaGGCTGTCATCCTCCGGGCTCTCGCAACGACAGCA +
Preference number: 3 (lower is better)
Translates to: VLHAGLRESPFP*AVILRALATTA
Trigger: TGCTGTCGTTGCGAGAGCCCGGAGGATGACAGCCCAGGGGAAGGGGCTCTCCCGCAGACCTGCGTGAAGGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000235766.3
ENSMUST00000236586.3
3UTR GCA 72 bp CTGTCCCCATCGTCCCCACCGCAGGTGTCTGGAGGCTaGACATCTGCAAATCCCACGGGTCCTCAGGCAGGG +
Preference number: 3 (lower is better)
Translates to: LSPSSPPQVSGG*TSANPTGPQAG
Trigger: CCCTGCCTGAGGACCCGTGGGATTTGCAGATGTGCAGCCTCCAGACACCTGCGGTGGGGACGATGGGGACAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000025484.9
ENSMUST00000235215.2
ENSMUST00000235766.3
ENSMUST00000235947.2
ENSMUST00000236586.3
ENSMUST00000237358.2
ENSMUST00000237502.2
ENSMUST00000237680.2
3UTR CCA 72 bp GGGGTTTGGTGGTCTTGGCATGATGTACCTTCTCCGTaGTGGCTGCCACCGCAGCACCCGACTGGCACCTCC +
Preference number: 3 (lower is better)
Translates to: GVWWSWHDVPSP*WLPPQHPTGTS
Trigger: GGAGGTGCCAGTCGGGTGCTGCGGTGGCAGCCACCACGGAGAAGGTACATCATGCCAAGACCACCAAACCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000238149.2
3UTR GCA 72 bp ATCGTCCCCACCGCAGGTGTCTGGAGGCTGCACATCTaGAAATCCCACGGGTCCTCAGGCAGGGTCACAGCT +
Preference number: 3 (lower is better)
Translates to: IVPTAGVWRLHI*KSHGSSGRVTA
Trigger: AGCTGTGACCCTGCCTGAGGACCCGTGGGATTTGCAGATGTGCAGCCTCCAGACACCTGCGGTGGGGACGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000235215.2
ENSMUST00000235766.3
ENSMUST00000235947.2
ENSMUST00000237502.2
ENSMUST00000237680.2
3UTR-3UTR CAA 90 bp CACCGCAGGTGTCTGGAGGCTGCACATCTGCAAATCCCACGGGTCCTCAGGCAGGTGGAGCACAGCTTGTaGGACTGGATGTGGGAGTGC +
Preference number: 3 (lower is better)
Translates to: HRRCLEAAHLQIPRVLRQVEHSL*DWMWEC
Trigger: GCACTCCCACATCCAGTCCAACAAGCTGTGCTCCAC...CTGCCTGAGGACCCGTGGGATTTGCAGATGTGCAGCCTCCAGACACCTGCGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000235215.2
ENSMUST00000235947.2
ENSMUST00000237502.2
ENSMUST00000237680.2
3UTR GCA 72 bp CAGAGCCACCTGAGGCGAGGAGTCAAGGGCCCTCCCTaGAAGTATTCCCTGAGCTTGTCCCGGGAAGATTGC +
Preference number: 3 (lower is better)
Translates to: QSHLRRGVKGPP*KYSLSLSREDC
Trigger: GCAATCTTCCCGGGACAAGCTCAGGGAATACTTGCAGGGAGGGCCCTTGACTCCTCGCCTCAGGTGGCTCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237502.2
3UTR-3UTR CAA 90 bp CCATCGTCCCCACCGCAGGTGTCTGGAGGCTGCACATCTGCAAATCCCACGGGTAGGGAGATGAGACTCTaGCAGTCACCACAGTGGCAG +
Preference number: 3 (lower is better)
Translates to: PSSPPQVSGGCTSANPTGREMRL*QSPQWQ
Trigger: CTGCCACTGTGGTGACTGCAAGAGTCTCATCTCCCT...ACCCGTGGGATTTGCAGATGTGCAGCCTCCAGACACCTGCGGTGGGGACGATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000025484.9
ENSMUST00000235215.2
ENSMUST00000235766.3
ENSMUST00000235947.2
ENSMUST00000236586.3
ENSMUST00000237502.2
3UTR-3UTR CAA 90 bp CTTGGGGTTTGGTGGTCTTGGCATGATGTACCTTCTCCGTGGTGGCTGCCACCGATGGCTGACAGGCCCTaGAGCTGCCGTGCACCAGTT +
Preference number: 3 (lower is better)
Translates to: LGVWWSWHDVPSPWWLPPMADRP*SCRAPV
Trigger: AACTGGTGCACGGCAGCTCAAGGGCCTGTCAGCCAT...CGGTGGCAGCCACCACGGAGAAGGTACATCATGCCAAGACCACCAAACCCCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000238149.2
3UTR GCA 72 bp GGCAGTGGACAGTGGCTACACTGTCAACAGAAGCAGTaGCAGGTGACCGCTCCAACTCACTCACACTCCCGT +
Preference number: 3 (lower is better)
Translates to: GSGQWLHCQQKQ*QVTAPTHSHSR
Trigger: ACGGGAGTGTGAGTGAGTTGGAGCGGTCACCTGGCACTGCTTCTGTTGACAGTGTAGCCACTGTCCACTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000025484.9
ENSMUST00000235215.2
ENSMUST00000235766.3
ENSMUST00000235947.2
ENSMUST00000236586.3
ENSMUST00000237502.2
3UTR GCA 72 bp CCTGAAAGGGGACTGGGGGAAGGGATAATGGCTGTGTaGATAGCTGTCTGCCAACAGGAGCCACTAGCCCTG +
Preference number: 3 (lower is better)
Translates to: PERGLGEGIMAV*IAVCQQEPLAL
Trigger: CAGGGCTAGTGGCTCCTGTTGGCAGACAGCTATGCACACAGCCATTATCCCTTCCCCCAGTCCCCTTTCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000235766.3
ENSMUST00000236586.3
3UTR GCA 72 bp GGAGTTGAAGATGCCACAGGCAGTGCTTCCCGTAAGTaGCTCTCAGAGGCCAGTCTGCTCCCACTTCAGTGC +
Preference number: 3 (lower is better)
Translates to: GVEDATGSASRK*LSEASLLPLQC
Trigger: GCACTGAAGTGGGAGCAGACTGGCCTCTGAGAGGCACTTACGGGAAGCACTGCCTGTGGCATCTTCAACTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000235766.3
ENSMUST00000236586.3
3UTR CCA 72 bp CTCAACTGCGTGGAGCACAGCTTGTTGGACTGGATGTaGGAGTGCACCAGATCAGCCAGGGCCTTGGAGAAC +
Preference number: 3 (lower is better)
Translates to: LNCVEHSLLDWM*ECTRSARALEN
Trigger: GTTCTCCAAGGCCCTGGCTGATCTGGTGCACTCCCACATCCAGTCCAACAAGCTGTGCTCCACGCAGTTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000235215.2
ENSMUST00000235947.2
ENSMUST00000237680.2
3UTR-3UTR CAA 90 bp CAGGAAGAGCCTCTGAAGAAAGTCTTGAACTTCTCCAAGGGTTTCGGGGCCTCCTTGGGGGTTCGGCGTTaGGCGATGAATGGTGCCAGC +
Preference number: 3 (lower is better)
Translates to: QEEPLKKVLNFSKGFGASLGVRR*AMNGAS
Trigger: GCTGGCACCATTCATCGCCAAACGCCGAACCCCCAA...GGAGGCCCCGAAACCCTTGGAGAAGTTCAAGACTTTCTTCAGAGGCTCTTCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000238149.2
3UTR TCA 72 bp TCCCTGGAGACAGGAAGAAGGCAGAGTCCCCTTCCCTaGGGCACTGTGGACTCAAATGAAGGCGTACACAGC +
Preference number: 3 (lower is better)
Translates to: SLETGRRQSPLP*GTVDSNEGVHS
Trigger: GCTGTGTACGCCTTCATTTGAGTCCACAGTGCCTCAGGGAAGGGGACTCTGCCTTCTTCCTGTCTCCAGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000235766.3
ENSMUST00000236586.3
3UTR-3UTR CAA 90 bp TGGATGTGGGAGTGCACCAGATCAGCCAGGGCCTTGGAGAACAATGGATTTCCAGTGGAGCACAGCTTGTaGGACTGGATGTGGGAGTGC +
Preference number: 3 (lower is better)
Translates to: WMWECTRSARALENNGFPVEHSL*DWMWEC
Trigger: GCACTCCCACATCCAGTCCAACAAGCTGTGCTCCAC...TGGAAATCCATTGTTCTCCAAGGCCCTGGCTGATCTGGTGCACTCCCACATCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000235215.2
ENSMUST00000235947.2
ENSMUST00000237680.2
3UTR-3UTR CAA 90 bp TGTATGTCTGTGATGCTAACTAGCGCCCAGGAAACGGGAGCGGGAGGCACACTGTCTGCGATACTGCTCTaGAATTTTGGGGGTTCGGCG +
Preference number: 3 (lower is better)
Translates to: CMSVMLTSAQETGAGGTLSAILL*NFGGSA
Trigger: CGCCGAACCCCCAAAATTCAAGAGCAGTATCGCAGA...CAGTGTGCCTCCCGCTCCCGTTTCCTGGGCGCTAGTTAGCATCACAGACATACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000235215.2
ENSMUST00000237680.2
3UTR-3UTR CAA 90 bp TCACCACAGTGGCAGTGGACAGTGGCTACACTGTCAACAGAAGCAGTGCCAGGTTTGGAAGTCCACATCTaGATGGGGGATCCACCTCCG +
Preference number: 3 (lower is better)
Translates to: SPQWQWTVATLSTEAVPGLEVHI*MGDPPP
Trigger: CGGAGGTGGATCCCCCATCAAGATGTGGACTTCCAA...ACCTGGCACTGCTTCTGTTGACAGTGTAGCCACTGTCCACTGCCACTGTGGTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000235215.2
3UTR-3UTR CAA 90 bp TGTCTGGAGGCTGCACATCTGCAAATCCCACGGGTCCTCAGGCAGGGTCACAGCATGCCTTCTCCTTGCTaGGAAGTCCACATCTTGATG +
Preference number: 3 (lower is better)
Translates to: CLEAAHLQIPRVLRQGHSMPSPC*EVHILM
Trigger: CATCAAGATGTGGACTTCCAAGCAAGGAGAAGGCAT...GCTGTGACCCTGCCTGAGGACCCGTGGGATTTGCAGATGTGCAGCCTCCAGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000235215.2
ENSMUST00000237680.2
3UTR-3UTR CAA 90 bp GTGTCTGGAGGCTGCACATCTGCAAATCCCACGGGTCCTCAGGCAGGGTCACAGTCTCCATCTCTTCAATaGCCTCTTCTGTCAGGGGAT +
Preference number: 3 (lower is better)
Translates to: VSGGCTSANPTGPQAGSQSPSLQ*PLLSGD
Trigger: ATCCCCTGACAGAAGAGGCAATTGAAGAGATGGAGA...CTGTGACCCTGCCTGAGGACCCGTGGGATTTGCAGATGTGCAGCCTCCAGACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000235215.2
ENSMUST00000237680.2
3UTR-3UTR CAA 90 bp GGGAGGGAGATGAGACTCTTGCAGTCACCACAGTGGCAGTGGACAGTGGCTACAAAGTATTCCCTGAGCTaGTCCCGGGAAGATTGCTCC +
Preference number: 3 (lower is better)
Translates to: GREMRLLQSPQWQWTVATKYSLS*SREDCS
Trigger: GGAGCAATCTTCCCGGGACAAGCTCAGGGAATACTT...TGTAGCCACTGTCCACTGCCACTGTGGTGACTGCAAGAGTCTCATCTCCCTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237502.2
3UTR CCA 72 bp GCAAGAGAGAAATCACAGTTTGTGCCCAGACAAACGTaGCTTCTGTCCCCATCGTCCCCACCGCAGGTGTCT +
Preference number: 3 (lower is better)
Translates to: AREKSQFVPRQT*LLSPSSPPQVS
Trigger: AGACACCTGCGGTGGGGACGATGGGGACAGAAGCCACGTTTGTCTGGGCACAAACTGTGATTTCTCTCTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000025484.9
ENSMUST00000235215.2
ENSMUST00000235766.3
ENSMUST00000235947.2
ENSMUST00000236586.3
ENSMUST00000237358.2
ENSMUST00000237502.2
ENSMUST00000237680.2
3UTR CCA 72 bp CCAGGGAGGGAGATGAGACTCTTGCAGTCACCACAGTaGCAGTGGACAGTGGCTACACTGTCAACAGAAGCA +
Preference number: 3 (lower is better)
Translates to: PGREMRLLQSPQ*QWTVATLSTEA
Trigger: TGCTTCTGTTGACAGTGTAGCCACTGTCCACTGCCACTGTGGTGACTGCAAGAGTCTCATCTCCCTCCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000025484.9
ENSMUST00000235215.2
ENSMUST00000235766.3
ENSMUST00000235947.2
ENSMUST00000236586.3
ENSMUST00000237502.2
3UTR-3UTR CAA 90 bp ACTAGCGCCCAGGAAACGGGAGCGGGAGGCACACTGGAAGCCAGTTTGGCCTACCCAAGGAACACAATGTaGTATGTCTGTGATGCTAAC +
Preference number: 3 (lower is better)
Translates to: TSAQETGAGGTLEASLAYPRNTM*YVCDAN
Trigger: GTTAGCATCACAGACATACAACATTGTGTTCCTTGG...GTAGGCCAAACTGGCTTCCAGTGTGCCTCCCGCTCCCGTTTCCTGGGCGCTAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000025484.9
ENSMUST00000235215.2
ENSMUST00000235766.3
ENSMUST00000235947.2
ENSMUST00000236586.3
ENSMUST00000237358.2
ENSMUST00000237502.2
ENSMUST00000237680.2
3UTR-3UTR CAA 90 bp TGGATGTGGGAGTGCACCAGATCAGCCAGGGCCTTGGAGAACAATGGATTTCCAAGGGAGATGAGACTCTaGCAGTCACCACAGTGGCAG +
Preference number: 3 (lower is better)
Translates to: WMWECTRSARALENNGFPREMRL*QSPQWQ
Trigger: CTGCCACTGTGGTGACTGCAAGAGTCTCATCTCCCT...TGGAAATCCATTGTTCTCCAAGGCCCTGGCTGATCTGGTGCACTCCCACATCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000235215.2
ENSMUST00000235947.2
3UTR-3UTR CAA 90 bp TTGTTTCAGTTTCCAGGGAGGGAGATGAGACTCTTGCAGTCACCACAGTGGCAGGTGGAGCACAGCTTGTaGGACTGGATGTGGGAGTGC +
Preference number: 3 (lower is better)
Translates to: LFQFPGREMRLLQSPQWQVEHSL*DWMWEC
Trigger: GCACTCCCACATCCAGTCCAACAAGCTGTGCTCCAC...CTGCCACTGTGGTGACTGCAAGAGTCTCATCTCCCTCCCTGGAAACTGAAACAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000235215.2
ENSMUST00000235947.2
ENSMUST00000237502.2
3UTR-3UTR CAA 90 bp AGGCAGGGTCACAGCTGTTGGCTGGTGAAGAAGGATTTAGTCTTCCTGCAGACATGCGTGGAGCACAGCTaGTTGGACTGGATGTGGGAG +
Preference number: 3 (lower is better)
Translates to: RQGHSCWLVKKDLVFLQTCVEHS*LDWMWE
Trigger: CTCCCACATCCAGTCCAACAAGCTGTGCTCCACGCA...TGTCTGCAGGAAGACTAAATCCTTCTTCACCAGCCAACAGCTGTGACCCTGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000235215.2
ENSMUST00000235947.2
ENSMUST00000237502.2
ENSMUST00000237680.2
3UTR-3UTR CAA 90 bp CAGGCAAGAGAGAAATCACAGTTTGTGCCCAGACAAACGTGGCTTCTGTCCCCATGCGTGGAGCACAGCTaGTTGGACTGGATGTGGGAG +
Preference number: 3 (lower is better)
Translates to: QAREKSQFVPRQTWLLSPCVEHS*LDWMWE
Trigger: CTCCCACATCCAGTCCAACAAGCTGTGCTCCACGCA...TGGGGACAGAAGCCACGTTTGTCTGGGCACAAACTGTGATTTCTCTCTTGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000235215.2
ENSMUST00000235947.2
ENSMUST00000237502.2
ENSMUST00000237680.2
3UTR-3UTR CAA 90 bp CACAGGCAAGAGAGAAATCACAGTTTGTGCCCAGACAAACGTGGCTTCTGTCCCTGCGTGGAGCACAGCTaGTTGGACTGGATGTGGGAG +
Preference number: 3 (lower is better)
Translates to: HRQERNHSLCPDKRGFCPCVEHS*LDWMWE
Trigger: CTCCCACATCCAGTCCAACAAGCTGTGCTCCACGCA...GGGACAGAAGCCACGTTTGTCTGGGCACAAACTGTGATTTCTCTCTTGCCTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000235215.2
ENSMUST00000235947.2
ENSMUST00000237502.2
ENSMUST00000237680.2
3UTR-3UTR CAA 90 bp GTACCATCGTGTTTTGTGTTTGATGCAGGTGAGCACATGATCCCAAGCTGTGCGTTGGGGGTTCGGCGTTaGGCGATGAATGGTGCCAGC +
Preference number: 3 (lower is better)
Translates to: VPSCFVFDAGEHMIPSCALGVRR*AMNGAS
Trigger: GCTGGCACCATTCATCGCCAAACGCCGAACCCCCAA...CGCACAGCTTGGGATCATGTGCTCACCTGCATCAAACACAAAACACGATGGTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000235215.2
3UTR-3UTR CAA 90 bp CTTCCTCCCCCGCTCACAAAGCCCTTTGATAGCCTCATCTGTCTGAGGGCCCAACACCATGCCTTCTCCTaGCTTGGAAGTCCACATCTT +
Preference number: 3 (lower is better)
Translates to: LPPPLTKPFDSLICLRAQHHAFS*LGSPHL
Trigger: AAGATGTGGACTTCCAAGCAAGGAGAAGGCATGGTG...TTGGGCCCTCAGACAGATGAGGCTATCAAAGGGCTTTGTGAGCGGGGGAGGAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000235215.2
ENSMUST00000237680.2
3UTR TCA 72 bp TCCATTCACTGTGGGACAGTCCCTCACAGGCCACTCTaGCGCTCATCCCCAGAGGTGATGAAATGGATACAG +
Preference number: 3 (lower is better)
Translates to: SIHCGTVPHRPL*RSSPEVMKWIQ
Trigger: CTGTATCCATTTCATCACCTCTGGGGATGAGCGTCAGAGTGGCCTGTGAGGGACTGTCCCACAGTGAATGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000235766.3
ENSMUST00000236586.3
3UTR GCA 72 bp AAGTGCCTCTCAGAGGCCAGTCTGCTCCCACTTCAGTaGCGGCAACAGTTCCAGACAACTCATTCAGGGTTT +
Preference number: 3 (lower is better)
Translates to: KCLSEASLLPLQ*RQQFQTTHSGF
Trigger: AAACCCTGAATGAGTTGTCTGGAACTGTTGCCGGCACTGAAGTGGGAGCAGACTGGCCTCTGAGAGGCACTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000235766.3
ENSMUST00000236586.3
3UTR GCA 72 bp GTCTTGGCGTTCCCCTGTACTGGGGCATATACAGTTTaGGTGTTCAATGGGCCTCTCTTTCCACTGATGGCC +
Preference number: 3 (lower is better)
Translates to: VLAFPCTGAYTV*VFNGPLFPLMA
Trigger: GGCCATCAGTGGAAAGAGAGGCCCATTGAACACGCAAACTGTATATGCCCCAGTACAGGGGAACGCCAAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000235766.3
ENSMUST00000236586.3
3UTR CCA 72 bp AGGGAGATGAGACTCTTGCAGTCACCACAGTGGCAGTaGACAGTGGCTACACTGTCAACAGAAGCAGTGCCA +
Preference number: 3 (lower is better)
Translates to: REMRLLQSPQWQ*TVATLSTEAVP
Trigger: TGGCACTGCTTCTGTTGACAGTGTAGCCACTGTCCACTGCCACTGTGGTGACTGCAAGAGTCTCATCTCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000025484.9
ENSMUST00000235215.2
ENSMUST00000235766.3
ENSMUST00000235947.2
ENSMUST00000236586.3
ENSMUST00000237502.2
3UTR CCA 72 bp TGGGGAGCTAAGCCCATATCCATCAGTAGCATTTCCTaGTGGCACTGTCCCTGGAGACAGGAAGAAGGCAGA +
Preference number: 3 (lower is better)
Translates to: WGAKPISISSIS*WHCPWRQEEGR
Trigger: TCTGCCTTCTTCCTGTCTCCAGGGACAGTGCCACCAGGAAATGCTACTGATGGATATGGGCTTAGCTCCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000235766.3
ENSMUST00000236586.3
3UTR CCA 72 bp GTTCCACCTATAAGGTTGCAGACCCCTTTAGCTCCTTaGATACTTTCTCTAGCTCCTCCGTTGGGGGCCCTG +
Preference number: 3 (lower is better)
Translates to: VPPIRLQTPLAP*ILSLAPPLGAL
Trigger: CAGGGCCCCCAACGGAGGAGCTAGAGAAAGTATCCAAGGAGCTAAAGGGGTCTGCAACCTTATAGGTGGAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000235766.3
ENSMUST00000236586.3
3UTR-3UTR CAA 90 bp CAGGTGTCTGGAGGCTGCACATCTGCAAATCCCACGGGTCCTCAGGCAGGGTCACCAAGGAACACAATGTaGTATGTCTGTGATGCTAAC +
Preference number: 3 (lower is better)
Translates to: QVSGGCTSANPTGPQAGSPRNTM*YVCDAN
Trigger: GTTAGCATCACAGACATACAACATTGTGTTCCTTGG...TGACCCTGCCTGAGGACCCGTGGGATTTGCAGATGTGCAGCCTCCAGACACCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000235215.2
ENSMUST00000235766.3
ENSMUST00000235947.2
ENSMUST00000237502.2
ENSMUST00000237680.2
3UTR-3UTR CAA 90 bp GGATGTGGGAGTGCACCAGATCAGCCAGGGCCTTGGAGAACAATGGATTTCCATGCAGGGTCACAGCTGTaGGCTGGTGAAGAAGGATTT +
Preference number: 3 (lower is better)
Translates to: GCGSAPDQPGPWRTMDFHAGSQL*AGEEGF
Trigger: AAATCCTTCTTCACCAGCCAACAGCTGTGACCCTGC...ATGGAAATCCATTGTTCTCCAAGGCCCTGGCTGATCTGGTGCACTCCCACATCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000235215.2
ENSMUST00000235947.2
ENSMUST00000237680.2
3UTR-3UTR CAA 90 bp CACCTCCGATTCTGCGATACTGCTCTTGAATTTTGGGGGTTCGGCGTTTGGCGATCTGCGATACTGCTCTaGAATTTTGGGGGTTCGGCG +
Preference number: 3 (lower is better)
Translates to: HLRFCDTALEFWGFGVWRSAILL*NFGGSA
Trigger: CGCCGAACCCCCAAAATTCAAGAGCAGTATCGCAGA...TCGCCAAACGCCGAACCCCCAAAATTCAAGAGCAGTATCGCAGAATCGGAGGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENSMUST00000235215.2
ENSMUST00000237680.2
3UTR TCA 72 bp TCACCATGCCTTCTCCTTGCTTGGAAGTCCACATCTTaGTGGGGGATCCACCTCCGATTCTGCGATACTGCT +
Preference number: 3 (lower is better)
Translates to: SPCLLLAWKSTS*WGIHLRFCDTA
Trigger: AGCAGTATCGCAGAATCGGAGGTGGATCCCCCATCAAGATGTGGACTTCCAAGCAAGGAGAAGGCATGGTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000235215.2
ENSMUST00000237680.2
3UTR CCA 72 bp GATTTACACAGAGCGGACAGTTCAGACTCAACTGCGTaGAGCACAGCTTGTTGGACTGGATGTGGGAGTGCA +
Preference number: 3 (lower is better)
Translates to: DLHRADSSDSTA*STACWTGCGSA
Trigger: TGCACTCCCACATCCAGTCCAACAAGCTGTGCTCCACGCAGTTGAGTCTGAACTGTCCGCTCTGTGTAAATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000235215.2
ENSMUST00000235947.2
ENSMUST00000237502.2
ENSMUST00000237680.2
3UTR CCA 72 bp CAGGAAGAAGGCAGAGTCCCCTTCCCTGAGGCACTGTaGACTCAAATGAAGGCGTACACAGCAAAGACTGAA +
Preference number: 3 (lower is better)
Translates to: QEEGRVPFPEAL*TQMKAYTAKTE
Trigger: TTCAGTCTTTGCTGTGTACGCCTTCATTTGAGTCCACAGTGCCTCAGGGAAGGGGACTCTGCCTTCTTCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000235766.3
ENSMUST00000236586.3
3UTR-3UTR CAA 90 bp AGGCAAGAGAGAAATCACAGTTTGTGCCCAGACAAACGTGGCTTCTGTCCCCATAGGGAGATGAGACTCTaGCAGTCACCACAGTGGCAG +
Preference number: 3 (lower is better)
Translates to: RQERNHSLCPDKRGFCPHREMRL*QSPQWQ
Trigger: CTGCCACTGTGGTGACTGCAAGAGTCTCATCTCCCT...ATGGGGACAGAAGCCACGTTTGTCTGGGCACAAACTGTGATTTCTCTCTTGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000025484.9
ENSMUST00000235215.2
ENSMUST00000235766.3
ENSMUST00000235947.2
ENSMUST00000236586.3
ENSMUST00000237502.2
3UTR-3UTR CAA 90 bp CAGGTGTCTGGAGGCTGCACATCTGCAAATCCCACGGGTCCTCAGGCAGGGTCAGGAATCTTAGCACTCTaGAAACATGCACTTGTTTCA +
Preference number: 3 (lower is better)
Translates to: QVSGGCTSANPTGPQAGSGILAL*KHALVS
Trigger: TGAAACAAGTGCATGTTTCAAGAGTGCTAAGATTCC...TGACCCTGCCTGAGGACCCGTGGGATTTGCAGATGTGCAGCCTCCAGACACCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000235215.2
ENSMUST00000235766.3
ENSMUST00000235947.2
ENSMUST00000237502.2
3UTR-3UTR CAA 90 bp CACAGGCAAGAGAGAAATCACAGTTTGTGCCCAGACAAACGTGGCTTCTGTCCCGCAGGGTCACAGCTGTaGGCTGGTGAAGAAGGATTT +
Preference number: 3 (lower is better)
Translates to: HRQERNHSLCPDKRGFCPAGSQL*AGEEGF
Trigger: AAATCCTTCTTCACCAGCCAACAGCTGTGACCCTGC...GGGACAGAAGCCACGTTTGTCTGGGCACAAACTGTGATTTCTCTCTTGCCTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000235215.2
ENSMUST00000235766.3
ENSMUST00000235947.2
ENSMUST00000237502.2
ENSMUST00000237680.2
3UTR-3UTR CAA 90 bp CTGGTTAGTTCATATTGTTGTTCCACCTATAAGGTTGCAGACCCCTTTAGCTCCGCACTGGAAGGTTCCTaGGCCCCTGGGGAGCTAAGC +
Preference number: 3 (lower is better)
Translates to: LVSSYCCSTYKVADPFSSALEGS*APGELS
Trigger: GCTTAGCTCCCCAGGGGCCAAGGAACCTTCCAGTGC...GGAGCTAAAGGGGTCTGCAACCTTATAGGTGGAACAACAATATGAACTAACCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000235766.3
ENSMUST00000236586.3
3UTR-3UTR CAA 90 bp GTGTCTGGAGGCTGCACATCTGCAAATCCCACGGGTCCTCAGGCAGGGTCACAGCAATGTTGTAGGAAGTaGTTTTGGGCAATAAGTGTA +
Preference number: 3 (lower is better)
Translates to: VSGGCTSANPTGPQAGSQQCCRK*FWAISV
Trigger: TACACTTATTGCCCAAAACAACTTCCTACAACATTG...CTGTGACCCTGCCTGAGGACCCGTGGGATTTGCAGATGTGCAGCCTCCAGACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000235215.2
ENSMUST00000235766.3
ENSMUST00000235947.2
ENSMUST00000237502.2
ENSMUST00000237680.2
3UTR-3UTR CAA 90 bp AACACAGGCAAGAGAGAAATCACAGTTTGTGCCCAGACAAACGTGGCTTCTGTCTTGGAAGTCCACATCTaGATGGGGGATCCACCTCCG +
Preference number: 3 (lower is better)
Translates to: NTGKREITVCAQTNVASVLEVHI*MGDPPP
Trigger: CGGAGGTGGATCCCCCATCAAGATGTGGACTTCCAA...GACAGAAGCCACGTTTGTCTGGGCACAAACTGTGATTTCTCTCTTGCCTGTGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000235215.2
ENSMUST00000237680.2
3UTR TCA 72 bp GAAACATGCACTTGTTTCAGTTTCCAGGGAGGGAGATaGGACTCTTGCAGTCACCACAGTGGCAGTGGACAG +
Preference number: 3 (lower is better)
Translates to: ETCTCFSFQGGR*DSCSHHSGSGQ
Trigger: CTGTCCACTGCCACTGTGGTGACTGCAAGAGTCTCATCTCCCTCCCTGGAAACTGAAACAAGTGCATGTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000025484.9
ENSMUST00000235215.2
ENSMUST00000235766.3
ENSMUST00000235947.2
ENSMUST00000236586.3
ENSMUST00000237502.2
3UTR CCA 72 bp CATTTGGAAGCTGATTATGGGATGGATCCCCGGGTATaGCAGTCTCTAGATGGTCCATCCTTTCGTCTCAGC +
Preference number: 3 (lower is better)
Translates to: HLEADYGMDPRV*QSLDGPSFRLS
Trigger: GCTGAGACGAAAGGATGGACCATCTAGAGACTGCCATACCCGGGGATCCATCCCATAATCAGCTTCCAAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000235766.3
ENSMUST00000236586.3
3UTR CCA 72 bp TTTTTGGCTTCCTCCTTTCTGGTTGAGCTTGGGGTTTaGTGGTCTTGGCATGATGTACCTTCTCCGTGGTGG +
Preference number: 3 (lower is better)
Translates to: FLASSFLVELGV*WSWHDVPSPWW
Trigger: CCACCACGGAGAAGGTACATCATGCCAAGACCACCAAACCCCAAGCTCAACCAGAAAGGAGGAAGCCAAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000238149.2
3UTR-3UTR CAA 90 bp GGAGATGAGACTCTTGCAGTCACCACAGTGGCAGTGGACAGTGGCTACACTGTCCCAAGGAACACAATGTaGTATGTCTGTGATGCTAAC +
Preference number: 3 (lower is better)
Translates to: GDETLAVTTVAVDSGYTVPRNTM*YVCDAN
Trigger: GTTAGCATCACAGACATACAACATTGTGTTCCTTGG...GACAGTGTAGCCACTGTCCACTGCCACTGTGGTGACTGCAAGAGTCTCATCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000025484.9
ENSMUST00000235215.2
ENSMUST00000235766.3
ENSMUST00000235947.2
ENSMUST00000236586.3
ENSMUST00000237502.2
3UTR-3UTR CAA 90 bp CCACAGTGGCAGTGGACAGTGGCTACACTGTCAACAGAAGCAGTGCCAGGTGACTTCCATATTGATAAATaGACCCCAGGATCAGTCACT +
Preference number: 3 (lower is better)
Translates to: PQWQWTVATLSTEAVPGDFHIDK*TPGSVT
Trigger: AGTGACTGATCCTGGGGTCAATTTATCAATATGGAA...GTCACCTGGCACTGCTTCTGTTGACAGTGTAGCCACTGTCCACTGCCACTGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000025484.9
ENSMUST00000235215.2
ENSMUST00000235766.3
ENSMUST00000235947.2
ENSMUST00000236586.3
ENSMUST00000237502.2
3UTR-3UTR CAA 90 bp CACCACAGTGGCAGTGGACAGTGGCTACACTGTCAACAGAAGCAGTGCCAGGTGTTCCATATTGATAAATaGACCCCAGGATCAGTCACT +
Preference number: 3 (lower is better)
Translates to: HHSGSGQWLHCQQKQCQVFHIDK*TPGSVT
Trigger: AGTGACTGATCCTGGGGTCAATTTATCAATATGGAA...CACCTGGCACTGCTTCTGTTGACAGTGTAGCCACTGTCCACTGCCACTGTGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000025484.9
ENSMUST00000235215.2
ENSMUST00000235766.3
ENSMUST00000235947.2
ENSMUST00000236586.3
ENSMUST00000237502.2
3UTR-3UTR CAA 90 bp TGGCAGTGGACAGTGGCTACACTGTCAACAGAAGCAGTGCCAGGTGACCGCTCCCAATGTTGTAGGAAGTaGTTTTGGGCAATAAGTGTA +
Preference number: 3 (lower is better)
Translates to: WQWTVATLSTEAVPGDRSQCCRK*FWAISV
Trigger: TACACTTATTGCCCAAAACAACTTCCTACAACATTG...GGAGCGGTCACCTGGCACTGCTTCTGTTGACAGTGTAGCCACTGTCCACTGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000025484.9
ENSMUST00000235215.2
ENSMUST00000235766.3
ENSMUST00000235947.2
ENSMUST00000236586.3
ENSMUST00000237502.2
3UTR-3UTR CAA 90 bp GCAGTCACCACAGTGGCAGTGGACAGTGGCTACACTGTCAACAGAAGCAGTGCCGGAATCTTAGCACTCTaGAAACATGCACTTGTTTCA +
Preference number: 3 (lower is better)
Translates to: AVTTVAVDSGYTVNRSSAGILAL*KHALVS
Trigger: TGAAACAAGTGCATGTTTCAAGAGTGCTAAGATTCC...GGCACTGCTTCTGTTGACAGTGTAGCCACTGTCCACTGCCACTGTGGTGACTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000025484.9
ENSMUST00000235215.2
ENSMUST00000235766.3
ENSMUST00000235947.2
ENSMUST00000236586.3
ENSMUST00000237502.2
3UTR TCA 72 bp ACTGTGGACTCAAATGAAGGCGTACACAGCAAAGACTaGACTTGCACACGTTTATTAGGCTATGCGCCCGGG +
Preference number: 3 (lower is better)
Translates to: TVDSNEGVHSKD*TCTRLLGYAPG
Trigger: CCCGGGCGCATAGCCTAATAAACGTGTGCAAGTTCAGTCTTTGCTGTGTACGCCTTCATTTGAGTCCACAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000235766.3
ENSMUST00000236586.3
3UTR GCA 72 bp CAGTTCGTAGAGCGTCTCAATGTGGTCACTGGTAAATaGTATTGGAACCAAGAGGATGTTCTTCCTCCCCCG +
Preference number: 3 (lower is better)
Translates to: QFVERLNVVTGK*YWNQEDVLPPP
Trigger: CGGGGGAGGAAGAACATCCTCTTGGTTCCAATAGCATTTACCAGTGACCACATTGAGACGCTCTACGAACTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000235215.2
ENSMUST00000235947.2
ENSMUST00000237680.2
3UTR CCA 72 bp TTATGGGATGGATCCCCGGGTATGGCAGTCTCTAGATaGTCCATCCTTTCGTCTCAGCTCCAAACTTTGTCT +
Preference number: 3 (lower is better)
Translates to: LWDGSPGMAVSR*SILSSQLQTLS
Trigger: AGACAAAGTTTGGAGCTGAGACGAAAGGATGGACCATCTAGAGACTGCCATACCCGGGGATCCATCCCATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000235766.3
ENSMUST00000236586.3
3UTR-3UTR CAA 90 bp GACAGACAGGATAACAACTCTCAAAGACTCATCAATGCTAAAAGATCCCCGTCCAGGGAGATGAGACTCTaGCAGTCACCACAGTGGCAG +
Preference number: 3 (lower is better)
Translates to: DRQDNNSQRLINAKRSPSREMRL*QSPQWQ
Trigger: CTGCCACTGTGGTGACTGCAAGAGTCTCATCTCCCT...GGACGGGGATCTTTTAGCATTGATGAGTCTTTGAGAGTTGTTATCCTGTCTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000235766.3
ENSMUST00000236586.3
3UTR-3UTR CAA 90 bp GGATGTCCCAGTAGACAGATATTCCATATTGATAAATTGACCCCAGGATCAGTCTGCGTGGAGCACAGCTaGTTGGACTGGATGTGGGAG +
Preference number: 3 (lower is better)
Translates to: GCPSRQIFHIDKLTPGSVCVEHS*LDWMWE
Trigger: CTCCCACATCCAGTCCAACAAGCTGTGCTCCACGCA...GACTGATCCTGGGGTCAATTTATCAATATGGAATATCTGTCTACTGGGACATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000235215.2
ENSMUST00000235947.2
ENSMUST00000237502.2
ENSMUST00000237680.2
3UTR-3UTR CAA 90 bp GGATGTCCCAGTAGACAGATATTCCATATTGATAAATTGACCCCAGGATCAGTCTGGGCCACCTGTCGATaGTGCTCCACTTCATGGTGG +
Preference number: 3 (lower is better)
Translates to: GCPSRQIFHIDKLTPGSVWATCR*CSTSWW
Trigger: CCACCATGAAGTGGAGCACAATCGACAGGTGGCCCA...GACTGATCCTGGGGTCAATTTATCAATATGGAATATCTGTCTACTGGGACATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000235215.2
ENSMUST00000237680.2
3UTR-3UTR CAA 90 bp CCCAATTCTAAGAAGGGGCAAAGTGTCCACACTTTGGTCTTCGTTCTTCTTGAGTGCCCAGGAGAGGTATaGCAGGATCCTCCAGTAGTA +
Preference number: 3 (lower is better)
Translates to: PNSKKGQSVHTLVFVLLECPGEV*QDPPVV
Trigger: TACTACTGGAGGATCCTGCAATACCTCTCCTGGGCA...CTCAAGAAGAACGAAGACCAAAGTGTGGACACTTTGCCCCTTCTTAGAATTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000235766.3
ENSMUST00000236586.3
3UTR GCA 72 bp AAGATAAAACACAGGCAAGAGAGAAATCACAGTTTGTaGCCAGACAAACGTGGCTTCTGTCCCCATCGTCCC +
Preference number: 3 (lower is better)
Translates to: KIKHRQERNHSL*PDKRGFCPHRP
Trigger: GGGACGATGGGGACAGAAGCCACGTTTGTCTGGGCACAAACTGTGATTTCTCTCTTGCCTGTGTTTTATCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000025484.9
ENSMUST00000235215.2
ENSMUST00000235766.3
ENSMUST00000235947.2
ENSMUST00000236586.3
ENSMUST00000237358.2
ENSMUST00000237502.2
ENSMUST00000237680.2
3UTR-3UTR CAA 90 bp GGATGTGGGAGTGCACCAGATCAGCCAGGGCCTTGGAGAACAATGGATTTCCATTTCCATATTGATAAATaGACCCCAGGATCAGTCACT +
Preference number: 3 (lower is better)
Translates to: GCGSAPDQPGPWRTMDFHFHIDK*TPGSVT
Trigger: AGTGACTGATCCTGGGGTCAATTTATCAATATGGAA...ATGGAAATCCATTGTTCTCCAAGGCCCTGGCTGATCTGGTGCACTCCCACATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000235215.2
ENSMUST00000235947.2
ENSMUST00000237680.2
3UTR-3UTR CAA 90 bp GGAGATGAGACTCTTGCAGTCACCACAGTGGCAGTGGACAGTGGCTACACTGTCCAATGTTGTAGGAAGTaGTTTTGGGCAATAAGTGTA +
Preference number: 3 (lower is better)
Translates to: GDETLAVTTVAVDSGYTVQCCRK*FWAISV
Trigger: TACACTTATTGCCCAAAACAACTTCCTACAACATTG...GACAGTGTAGCCACTGTCCACTGCCACTGTGGTGACTGCAAGAGTCTCATCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000025484.9
ENSMUST00000235215.2
ENSMUST00000235766.3
ENSMUST00000235947.2
ENSMUST00000236586.3
ENSMUST00000237502.2
3UTR TCA 72 bp CACTTCCCGCAATATCCCCATGCCAATGTTTTCATCTaGAAAGCTGCTCAAGAGCCAAGACTGATGACAAGC +
Preference number: 3 (lower is better)
Translates to: HFPQYPHANVFI*KAAQEPRLMTS
Trigger: GCTTGTCATCAGTCTTGGCTCTTGAGCAGCTTTTCAGATGAAAACATTGGCATGGGGATATTGCGGGAAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000235766.3
ENSMUST00000236586.3
3UTR TCA 72 bp CAAAGACTCATCAATGCTAAAAGATCCCCGTCCTTCTaGACACTACCCTGGTATGTCACCCTCACCTATCTG +
Preference number: 3 (lower is better)
Translates to: QRLINAKRSPSF*TLPWYVTLTYL
Trigger: CAGATAGGTGAGGGTGACATACCAGGGTAGTGTTCAGAAGGACGGGGATCTTTTAGCATTGATGAGTCTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000235766.3
ENSMUST00000236586.3
3UTR TCA 72 bp TTGTTAGTGTATGCAATGGTGTCAGCATTTGGAAGCTaGTTATGGGATGGATCCCCGGGTATGGCAGTCTCT +
Preference number: 3 (lower is better)
Translates to: LLVYAMVSAFGS*LWDGSPGMAVS
Trigger: AGAGACTGCCATACCCGGGGATCCATCCCATAATCAGCTTCCAAATGCTGACACCATTGCATACACTAACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000235766.3
ENSMUST00000236586.3
3UTR GCA 72 bp GGAGTGTTCCTCTTTTCCCACATCCTCGCCAGCATCTaGTGTCACCTGAATTGTAATTCCAGTTCTTCACAA +
Preference number: 3 (lower is better)
Translates to: GVFLFSHILASI*CHLNCNSSSSQ
Trigger: TTGTGAAGAACTGGAATTACAATTCAGGTGACAGCAGATGCTGGCGAGGATGTGGGAAAAGAGGAACACTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000235766.3
ENSMUST00000236586.3
3UTR-3UTR CAA 90 bp AACACAGGCAAGAGAGAAATCACAGTTTGTGCCCAGACAAACGTGGCTTCTGTCCCAAGGAACACAATGTaGTATGTCTGTGATGCTAAC +
Preference number: 3 (lower is better)
Translates to: NTGKREITVCAQTNVASVPRNTM*YVCDAN
Trigger: GTTAGCATCACAGACATACAACATTGTGTTCCTTGG...GACAGAAGCCACGTTTGTCTGGGCACAAACTGTGATTTCTCTCTTGCCTGTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000025484.9
ENSMUST00000235215.2
ENSMUST00000235766.3
ENSMUST00000235947.2
ENSMUST00000236586.3
ENSMUST00000237358.2
ENSMUST00000237502.2
ENSMUST00000237680.2
3UTR-3UTR CAA 90 bp ATGAGACTCTTGCAGTCACCACAGTGGCAGTGGACAGTGGCTACACTGTCAACACAATGTTGTAGGAAGTaGTTTTGGGCAATAAGTGTA +
Preference number: 3 (lower is better)
Translates to: MRLLQSPQWQWTVATLSTQCCRK*FWAISV
Trigger: TACACTTATTGCCCAAAACAACTTCCTACAACATTG...TGTTGACAGTGTAGCCACTGTCCACTGCCACTGTGGTGACTGCAAGAGTCTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000025484.9
ENSMUST00000235215.2
ENSMUST00000235766.3
ENSMUST00000235947.2
ENSMUST00000236586.3
ENSMUST00000237502.2
3UTR TCA 72 bp ACCTTAGGGCTGTTGACAGGCTTAGTCTGGGCACGCTaGGATGGAAAAATCCACTTCTTCATAGATGATAGT +
Preference number: 3 (lower is better)
Translates to: TLGLLTGLVWAR*DGKIHFFIDDS
Trigger: ACTATCATCTATGAAGAAGTGGATTTTTCCATCTCAGCGTGCCCAGACTAAGCCTGTCAACAGCCCTAAGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000235766.3
ENSMUST00000236586.3
3UTR TCA 72 bp TCTTTTCCCACATCCTCGCCAGCATCTGCTGTCACCTaGATTGTAATTCCAGTTCTTCACAAACCATTCCAC +
Preference number: 3 (lower is better)
Translates to: SFPTSSPASAVT*IVIPVLHKPFH
Trigger: GTGGAATGGTTTGTGAAGAACTGGAATTACAATTCAGGTGACAGCAGATGCTGGCGAGGATGTGGGAAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000235766.3
ENSMUST00000236586.3
3UTR TCA 72 bp TGTGAGTTCTTTTGTGATTGGGTTACCCACTCAGGATaGTGCCCTCCAGGTCCATCCATTTGTCTAGGAATT +
Preference number: 3 (lower is better)
Translates to: CEFFCDWVTHSG*CPPGPSICLGI
Trigger: AATTCCTAGACAAATGGATGGACCTGGAGGGCATCATCCTGAGTGGGTAACCCAATCACAAAAGAACTCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000235766.3
ENSMUST00000236586.3
3UTR GCA 72 bp TGTCCTTCTTACCGGTTGGAATATCTTCTGGATATATaGCCAGGAGAGGTATTGCAGGATCCTCCAGTAGTA +
Preference number: 3 (lower is better)
Translates to: CPSYRLEYLLDI*PGEVLQDPPVV
Trigger: TACTACTGGAGGATCCTGCAATACCTCTCCTGGGCATATATCCAGAAGATATTCCAACCGGTAAGAAGGACA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000235766.3
ENSMUST00000236586.3
3UTR CCA 72 bp ATGCAGGTCTGTACACAGAGCAGCTCGAGACAGCACTaGCAGTTCACTGCTAATTACAATGACAAACATTTG +
Preference number: 3 (lower is better)
Translates to: MQVCTQSSSRQH*QFTANYNDKHL
Trigger: CAAATGTTTGTCATTGTAATTAGCAGTGAACTGCCAGTGCTGTCTCGAGCTGCTCTGTGTACAGACCTGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000235766.3
ENSMUST00000236586.3
3UTR CCA 72 bp TGCTGGGCGTTTGGGACAGTATGCTCCCTTGCCTCATaGTGTGATAACAGTTTAGATAAATCTACTCACACT +
Preference number: 3 (lower is better)
Translates to: CWAFGTVCSLAS*CDNSLDKSTHT
Trigger: AGTGTGAGTAGATTTATCTAAACTGTTATCACACCATGAGGCAAGGGAGCATACTGTCCCAAACGCCCAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000235766.3
ENSMUST00000236586.3
3UTR CCA 72 bp CAAAATCTTGTTAGTGTATGCAATGGTGTCAGCATTTaGAAGCTGATTATGGGATGGATCCCCGGGTATGGC +
Preference number: 3 (lower is better)
Translates to: QNLVSVCNGVSI*KLIMGWIPGYG
Trigger: GCCATACCCGGGGATCCATCCCATAATCAGCTTCCAAATGCTGACACCATTGCATACACTAACAAGATTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000235766.3
ENSMUST00000236586.3
3UTR TCA 72 bp GGAGCAGAAAGCAGGCTTCGCTGCTGGATTACAAAGTaGATTTCCTGTGTTCAGGAGACAGTACAAATCAAA +
Preference number: 3 (lower is better)
Translates to: GAESRLRCWITK*ISCVQETVQIK
Trigger: TTTGATTTGTACTGTCTCCTGAACACAGGAAATTCACTTTGTAATCCAGCAGCGAAGCCTGCTTTCTGCTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000235766.3
ENSMUST00000236586.3
3UTR CCA 72 bp ACATATGCAGCTAGAGACACGAGCTCTGGAGGGTACTaGTTAGTTCATATTGTTGTTCCACCTATAAGGTTG +
Preference number: 3 (lower is better)
Translates to: TYAARDTSSGGY*LVHIVVPPIRL
Trigger: CAACCTTATAGGTGGAACAACAATATGAACTAACCAGTACCCTCCAGAGCTCGTGTCTCTAGCTGCATATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000235766.3
ENSMUST00000236586.3
3UTR-3UTR CAA 90 bp CCCAATTCTAAGAAGGGGCAAAGTGTCCACACTTTGGTCTTCGTTCTTCTTGAGTTCCATATTGATAAATaGACCCCAGGATCAGTCACT +
Preference number: 3 (lower is better)
Translates to: PNSKKGQSVHTLVFVLLEFHIDK*TPGSVT
Trigger: AGTGACTGATCCTGGGGTCAATTTATCAATATGGAA...CTCAAGAAGAACGAAGACCAAAGTGTGGACACTTTGCCCCTTCTTAGAATTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000235766.3
ENSMUST00000236586.3
3UTR TCA 72 bp AAGACTGTAAACATCTCAGTCACCACTGGTAGCACATaGGGAGACACACCACAATGTTGTAGGAAGTTGTTT +
Preference number: 3 (lower is better)
Translates to: KTVNISVTTGST*GDTPQCCRKLF
Trigger: AAACAACTTCCTACAACATTGTGGTGTGTCTCCTCATGTGCTACCAGTGGTGACTGAGATGTTTACAGTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000025484.9
ENSMUST00000235215.2
ENSMUST00000235766.3
ENSMUST00000235947.2
ENSMUST00000236586.3
ENSMUST00000237502.2
ENSMUST00000237680.2
3UTR CCA 72 bp TATGAACATAGTGGAGCATGTGTCCTTCTTACCGGTTaGAATATCTTCTGGATATATGCCCAGGAGAGGTAT +
Preference number: 3 (lower is better)
Translates to: YEHSGACVLLTG*NIFWIYAQERY
Trigger: ATACCTCTCCTGGGCATATATCCAGAAGATATTCCAACCGGTAAGAAGGACACATGCTCCACTATGTTCATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000235766.3
ENSMUST00000236586.3
3UTR-3UTR CAA 90 bp GGATGTCCCAGTAGACAGATATTCCATATTGATAAATTGACCCCAGGATCAGTCCCAAGGAACACAATGTaGTATGTCTGTGATGCTAAC +
Preference number: 3 (lower is better)
Translates to: GCPSRQIFHIDKLTPGSVPRNTM*YVCDAN
Trigger: GTTAGCATCACAGACATACAACATTGTGTTCCTTGG...GACTGATCCTGGGGTCAATTTATCAATATGGAATATCTGTCTACTGGGACATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000025484.9
ENSMUST00000235215.2
ENSMUST00000235766.3
ENSMUST00000235947.2
ENSMUST00000236586.3
ENSMUST00000237358.2
ENSMUST00000237502.2
ENSMUST00000237680.2
3UTR-3UTR CAA 90 bp AACTGTGAAACTCATTCCTGGGATGTCCCAGTAGACAGATATTCCATATTGATATCTCCATCTCTTCAATaGCCTCTTCTGTCAGGGGAT +
Preference number: 3 (lower is better)
Translates to: NCETHSWDVPVDRYSILISPSLQ*PLLSGD
Trigger: ATCCCCTGACAGAAGAGGCAATTGAAGAGATGGAGA...TATCAATATGGAATATCTGTCTACTGGGACATCCCAGGAATGAGTTTCACAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000235215.2
ENSMUST00000237680.2
3UTR CCA 72 bp TTCCCAATTCTAAGAAGGGGCAAAGTGTCCACACTTTaGTCTTCGTTCTTCTTGAGTTTCATGTGTTTAGCA +
Preference number: 3 (lower is better)
Translates to: FPILRRGKVSTL*SSFFLSFMCLA
Trigger: TGCTAAACACATGAAACTCAAGAAGAACGAAGACCAAAGTGTGGACACTTTGCCCCTTCTTAGAATTGGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000235766.3
ENSMUST00000236586.3
3UTR-3UTR CAA 90 bp CTGGTTAGTTCATATTGTTGTTCCACCTATAAGGTTGCAGACCCCTTTAGCTCCTCCAGGTCCATCCATTaGTCTAGGAATTTCATAAAT +
Preference number: 3 (lower is better)
Translates to: LVSSYCCSTYKVADPFSSSRSIH*SRNFIN
Trigger: ATTTATGAAATTCCTAGACAAATGGATGGACCTGGA...GGAGCTAAAGGGGTCTGCAACCTTATAGGTGGAACAACAATATGAACTAACCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000235766.3
ENSMUST00000236586.3
3UTR-3UTR CAA 90 bp AGGATCTATTCTACCGCTTCAAGAGGAAGAGAGGGAAATCTATTTTCAAGATCATTCCATATTGATAAATaGACCCCAGGATCAGTCACT +
Preference number: 3 (lower is better)
Translates to: RIYSTASRGREGNLFSRSFHIDK*TPGSVT
Trigger: AGTGACTGATCCTGGGGTCAATTTATCAATATGGAA...TGATCTTGAAAATAGATTTCCCTCTCTTCCTCTTGAAGCGGTAGAATAGATCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000235766.3
ENSMUST00000236586.3
3UTR GCA 72 bp ATATCAGAGTCCTTTCAGCAAAATCTTGTTAGTGTATaGAATGGTGTCAGCATTTGGAAGCTGATTATGGGA +
Preference number: 3 (lower is better)
Translates to: ISESFQQNLVSV*NGVSIWKLIMG
Trigger: TCCCATAATCAGCTTCCAAATGCTGACACCATTGCATACACTAACAAGATTTTGCTGAAAGGACTCTGATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000235766.3
ENSMUST00000236586.3
CDS-3UTR TCA 90 bp TGGCGTGAGGCAGATGTCCTTCACGCAGGTCTGCGGGAGAGCCCCTTCCCCTGGTGGAAGTCCACATCTTaGTGGGGGATCCACCTCCGA +
Preference number: 4 (lower is better)
Translates to: WREADVLHAGLRESPFPWWKSTS*WGIHLR
Trigger: TCGGAGGTGGATCCCCCATCAAGATGTGGACTTCCA...CCAGGGGAAGGGGCTCTCCCGCAGACCTGCGTGAAGGACATCTGCCTCACGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000235766.3
ENSMUST00000236586.3
CDS-3UTR TCA 90 bp GGCGTGAGGCAGATGTCCTTCACGCAGGTCTGCGGGAGAGCCCCTTCCCCTGGGTTGGTGGTCTTGGCATaGTGTACCTTCTCCGTGGTG +
Preference number: 4 (lower is better)
Translates to: GVRQMSFTQVCGRAPSPGLVVLA*CTFSVV
Trigger: CACCACGGAGAAGGTACATCATGCCAAGACCACCAA...CCCAGGGGAAGGGGCTCTCCCGCAGACCTGCGTGAAGGACATCTGCCTCACGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000235766.3
ENSMUST00000236586.3
CDS-3UTR TCA 90 bp GGGAGGGAGATGAGACTCTTGCAGTCACCACAGTGGCAGTGGACAGTGGCTACATGGCTGACAGGCCCTTaGGCTGCCGTGCACCAGCGG +
Preference number: 4 (lower is better)
Translates to: GREMRLLQSPQWQWTVATWLTGP*AAVHQR
Trigger: CCGCTGGTGCACGGCAGCTCAAGGGCCTGTCAGCCA...TGTAGCCACTGTCCACTGCCACTGTGGTGACTGCAAGAGTCTCATCTCCCTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000235766.3
ENSMUST00000236586.3
ENSMUST00000237502.2
CDS-3UTR TCA 90 bp CACCACAGTGGCAGTGGACAGTGGCTACACTGTCAACAGAAGCAGTGCCAGGTGTGGCTGACAGGCCCTTaGGCTGCCGTGCACCAGCGG +
Preference number: 4 (lower is better)
Translates to: HHSGSGQWLHCQQKQCQVWLTGP*AAVHQR
Trigger: CCGCTGGTGCACGGCAGCTCAAGGGCCTGTCAGCCA...CACCTGGCACTGCTTCTGTTGACAGTGTAGCCACTGTCCACTGCCACTGTGGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000235766.3
ENSMUST00000236586.3
ENSMUST00000237502.2
CDS-3UTR GCA 90 bp ACCGCAGGTGTCTGGAGGCTGCACATCTGCAAATCCCACGGGTCCTCAGGCAGGGACTGGATGTGGGAGTaGACCAGATCAGCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: TAGVWRLHICKSHGSSGRDWMWE*TRSARA
Trigger: GGCCCTGGCTGATCTGGTGCACTCCCACATCCAGTC...CCTGCCTGAGGACCCGTGGGATTTGCAGATGTGCAGCCTCCAGACACCTGCGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000025484.9
ENSMUST00000235766.3
ENSMUST00000236586.3
ENSMUST00000237358.2
CDS-3UTR CCA 90 bp CGTCCCCACCGCAGGTGTCTGGAGGCTGCACATCTGCAAATCCCACGGGTCCTCTGCTCCACTTCATGGTaGGCTTCTGGCCCACCTCGT +
Preference number: 4 (lower is better)
Translates to: RPHRRCLEAAHLQIPRVLCSTSW*ASGPPR
Trigger: ACGAGGTGGGCCAGAAGCCCACCATGAAGTGGAGCA...GAGGACCCGTGGGATTTGCAGATGTGCAGCCTCCAGACACCTGCGGTGGGGACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000025484.9
ENSMUST00000235766.3
ENSMUST00000236586.3
ENSMUST00000237358.2
ENSMUST00000237502.2
CDS-3UTR TCA 90 bp TGGCAGTGGACAGTGGCTACACTGTCAACAGAAGCAGTGCCAGGTGACCGCTCCCTGCAAAGCACTGGATaGGGAGGGGGTGTGTGGGCC +
Preference number: 4 (lower is better)
Translates to: WQWTVATLSTEAVPGDRSLQSTG*GGGVWA
Trigger: GGCCCACACACCCCCTCCTCATCCAGTGCTTTGCAG...GGAGCGGTCACCTGGCACTGCTTCTGTTGACAGTGTAGCCACTGTCCACTGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000025484.9
ENSMUST00000235766.3
ENSMUST00000236586.3
ENSMUST00000237502.2
CDS-3UTR TCA 90 bp TCTGTGATGCTAACTAGCGCCCAGGAAACGGGAGCGGGAGGCACACTGGAAGCCAGGGGTCCCCTCTGTTaGCAACAGACATCGGCAGGG +
Preference number: 4 (lower is better)
Translates to: SVMLTSAQETGAGGTLEARGPLC*QQTSAG
Trigger: CCCTGCCGATGTCTGTTGTCAACAGAGGGGACCCCT...GGCTTCCAGTGTGCCTCCCGCTCCCGTTTCCTGGGCGCTAGTTAGCATCACAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000025484.9
ENSMUST00000235766.3
ENSMUST00000235947.2
ENSMUST00000236586.3
ENSMUST00000237358.2
ENSMUST00000237502.2
CDS-3UTR CCA 90 bp CGCCCAGGAAACGGGAGCGGGAGGCACACTGGAAGCCAGTTTGGCCTACATAGGGCCCAACCAGGGTACTaGACCAACCTTGGACTGCCA +
Preference number: 4 (lower is better)
Translates to: RPGNGSGRHTGSQFGLHRAQPGY*TNLGLP
Trigger: TGGCAGTCCAAGGTTGGTCCAGTACCCTGGTTGGGC...CCTATGTAGGCCAAACTGGCTTCCAGTGTGCCTCCCGCTCCCGTTTCCTGGGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000025484.9
ENSMUST00000235947.2
ENSMUST00000236586.3
ENSMUST00000237358.2
ENSMUST00000237502.2
CDS-3UTR CCA 90 bp GTGTCTGGAGGCTGCACATCTGCAAATCCCACGGGTCCTCAGGCAGGGTCACAGGATGTACCTTCTCCGTaGTGGCTGCCACCGCAGCAC +
Preference number: 4 (lower is better)
Translates to: VSGGCTSANPTGPQAGSQDVPSP*WLPPQH
Trigger: GTGCTGCGGTGGCAGCCACCACGGAGAAGGTACATC...CTGTGACCCTGCCTGAGGACCCGTGGGATTTGCAGATGTGCAGCCTCCAGACAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000235766.3
ENSMUST00000237502.2
ENSMUST00000237680.2
CDS-3UTR TCA 90 bp CGCCCAGGAAACGGGAGCGGGAGGCACACTGGAAGCCAGTTTGGCCTACATAGGTGGAAGTCCACATCTTaGTGGGGGATCCACCTCCGA +
Preference number: 4 (lower is better)
Translates to: RPGNGSGRHTGSQFGLHRWKSTS*WGIHLR
Trigger: TCGGAGGTGGATCCCCCATCAAGATGTGGACTTCCA...CCTATGTAGGCCAAACTGGCTTCCAGTGTGCCTCCCGCTCCCGTTTCCTGGGCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000025484.9
ENSMUST00000235766.3
ENSMUST00000236586.3
ENSMUST00000237358.2
ENSMUST00000237502.2
CDS-3UTR TCA 90 bp CCATCGTCCCCACCGCAGGTGTCTGGAGGCTGCACATCTGCAAATCCCACGGGTATAGCCTCATCTGTCTaGGGGCCCAACCAGGGTACT +
Preference number: 4 (lower is better)
Translates to: PSSPPQVSGGCTSANPTGIASSV*GPNQGT
Trigger: AGTACCCTGGTTGGGCCCTCAGACAGATGAGGCTAT...ACCCGTGGGATTTGCAGATGTGCAGCCTCCAGACACCTGCGGTGGGGACGATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000025484.9
ENSMUST00000236586.3
ENSMUST00000237358.2
ENSMUST00000237502.2
CDS-3UTR TCA 90 bp CCCATCGTCCCCACCGCAGGTGTCTGGAGGCTGCACATCTGCAAATCCCACGGGTTGGTGGTCTTGGCATaGTGTACCTTCTCCGTGGTG +
Preference number: 4 (lower is better)
Translates to: PIVPTAGVWRLHICKSHGLVVLA*CTFSVV
Trigger: CACCACGGAGAAGGTACATCATGCCAAGACCACCAA...CCCGTGGGATTTGCAGATGTGCAGCCTCCAGACACCTGCGGTGGGGACGATGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000235766.3
ENSMUST00000236586.3
ENSMUST00000237358.2
ENSMUST00000237502.2
ENSMUST00000237680.2
CDS-3UTR TCA 90 bp CGTCCCCACCGCAGGTGTCTGGAGGCTGCACATCTGCAAATCCCACGGGTCCTCTTCCTCCTTTCTGGTTaGGCTTGGGGTTTGGTGGTC +
Preference number: 4 (lower is better)
Translates to: RPHRRCLEAAHLQIPRVLFLLSG*AWGLVV
Trigger: GACCACCAAACCCCAAGCTCAACCAGAAAGGAGGAA...GAGGACCCGTGGGATTTGCAGATGTGCAGCCTCCAGACACCTGCGGTGGGGACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000235766.3
ENSMUST00000236586.3
ENSMUST00000237358.2
ENSMUST00000237502.2
ENSMUST00000237680.2
CDS-3UTR CCA 90 bp TCTGTGATGCTAACTAGCGCCCAGGAAACGGGAGCGGGAGGCACACTGGAAGCCTGCTCCACTTCATGGTaGGCTTCTGGCCCACCTCGT +
Preference number: 4 (lower is better)
Translates to: SVMLTSAQETGAGGTLEACSTSW*ASGPPR
Trigger: ACGAGGTGGGCCAGAAGCCCACCATGAAGTGGAGCA...GGCTTCCAGTGTGCCTCCCGCTCCCGTTTCCTGGGCGCTAGTTAGCATCACAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000025484.9
ENSMUST00000235766.3
ENSMUST00000236586.3
ENSMUST00000237358.2
ENSMUST00000237502.2
CDS-3UTR CCA 90 bp TCCCCATCGTCCCCACCGCAGGTGTCTGGAGGCTGCACATCTGCAAATCCCACGTTGTGCTCCACTTCATaGTGGGCTTCTGGCCCACCT +
Preference number: 4 (lower is better)
Translates to: SPSSPPQVSGGCTSANPTLCSTS*WASGPP
Trigger: AGGTGGGCCAGAAGCCCACCATGAAGTGGAGCACAA...CGTGGGATTTGCAGATGTGCAGCCTCCAGACACCTGCGGTGGGGACGATGGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000025484.9
ENSMUST00000235766.3
ENSMUST00000236586.3
ENSMUST00000237358.2
ENSMUST00000237502.2
CDS-3UTR CCA 90 bp GTCCCCATCGTCCCCACCGCAGGTGTCTGGAGGCTGCACATCTGCAAATCCCACTGGTCTGCAAAGCACTaGATGAGGAGGGGGTGTGTG +
Preference number: 4 (lower is better)
Translates to: VPIVPTAGVWRLHICKSHWSAKH*MRRGCV
Trigger: CACACACCCCCTCCTCATCCAGTGCTTTGCAGACCA...GTGGGATTTGCAGATGTGCAGCCTCCAGACACCTGCGGTGGGGACGATGGGGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000025484.9
ENSMUST00000235766.3
ENSMUST00000236586.3
ENSMUST00000237358.2
ENSMUST00000237502.2
CDS-3UTR CCA 90 bp CCATCGTCCCCACCGCAGGTGTCTGGAGGCTGCACATCTGCAAATCCCACGGGTCCAGTCGGTAGGGGTTaGGGTAACCCAGCTTTTCCA +
Preference number: 4 (lower is better)
Translates to: PSSPPQVSGGCTSANPTGPVGRG*GNPAFP
Trigger: TGGAAAAGCTGGGTTACCCCAACCCCTACCGACTGG...ACCCGTGGGATTTGCAGATGTGCAGCCTCCAGACACCTGCGGTGGGGACGATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000025484.9
ENSMUST00000235766.3
ENSMUST00000235947.2
ENSMUST00000236586.3
ENSMUST00000237358.2
ENSMUST00000237502.2
CDS-3UTR TCA 90 bp CCATCGTCCCCACCGCAGGTGTCTGGAGGCTGCACATCTGCAAATCCCACGGGTGAATGGGAAGTGTCATaGGGTCTCGGTCCAGGAAGA +
Preference number: 4 (lower is better)
Translates to: PSSPPQVSGGCTSANPTGEWEVS*GLGPGR
Trigger: TCTTCCTGGACCGAGACCTCATGACACTTCCCATTC...ACCCGTGGGATTTGCAGATGTGCAGCCTCCAGACACCTGCGGTGGGGACGATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000025484.9
ENSMUST00000235215.2
ENSMUST00000235766.3
ENSMUST00000236586.3
ENSMUST00000237358.2
ENSMUST00000237502.2
ENSMUST00000237680.2
CDS-3UTR TCA 90 bp ACCGCAGGTGTCTGGAGGCTGCACATCTGCAAATCCCACGGGTCCTCAGGCAGGGAATGGGAAGTGTCATaGGGTCTCGGTCCAGGAAGA +
Preference number: 4 (lower is better)
Translates to: TAGVWRLHICKSHGSSGREWEVS*GLGPGR
Trigger: TCTTCCTGGACCGAGACCTCATGACACTTCCCATTC...CCTGCCTGAGGACCCGTGGGATTTGCAGATGTGCAGCCTCCAGACACCTGCGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000025484.9
ENSMUST00000235215.2
ENSMUST00000235766.3
ENSMUST00000236586.3
ENSMUST00000237358.2
ENSMUST00000237502.2
ENSMUST00000237680.2
CDS-3UTR TCA 90 bp CACCACAGTGGCAGTGGACAGTGGCTACACTGTCAACAGAAGCAGTGCCAGGTGAGGGGTCCCCTCTGTTaGCAACAGACATCGGCAGGG +
Preference number: 4 (lower is better)
Translates to: HHSGSGQWLHCQQKQCQVRGPLC*QQTSAG
Trigger: CCCTGCCGATGTCTGTTGTCAACAGAGGGGACCCCT...CACCTGGCACTGCTTCTGTTGACAGTGTAGCCACTGTCCACTGCCACTGTGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000025484.9
ENSMUST00000235766.3
ENSMUST00000235947.2
ENSMUST00000236586.3
ENSMUST00000237502.2
CDS-3UTR TCA 90 bp CGTCCCCACCGCAGGTGTCTGGAGGCTGCACATCTGCAAATCCCACGGGTCCTCAACCCAGCTTTTCCATaGCTTTGTGGACAGTGGCTC +
Preference number: 4 (lower is better)
Translates to: RPHRRCLEAAHLQIPRVLNPAFP*LCGQWL
Trigger: GAGCCACTGTCCACAAAGTCATGGAAAAGCTGGGTT...GAGGACCCGTGGGATTTGCAGATGTGCAGCCTCCAGACACCTGCGGTGGGGACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000025484.9
ENSMUST00000235766.3
ENSMUST00000235947.2
ENSMUST00000236586.3
ENSMUST00000237358.2
ENSMUST00000237502.2
CDS-3UTR TCA 90 bp TCTGTGATGCTAACTAGCGCCCAGGAAACGGGAGCGGGAGGCACACTGGAAGCCATAGCCTCATCTGTCTaGGGGCCCAACCAGGGTACT +
Preference number: 4 (lower is better)
Translates to: SVMLTSAQETGAGGTLEAIASSV*GPNQGT
Trigger: AGTACCCTGGTTGGGCCCTCAGACAGATGAGGCTAT...GGCTTCCAGTGTGCCTCCCGCTCCCGTTTCCTGGGCGCTAGTTAGCATCACAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000025484.9
ENSMUST00000236586.3
ENSMUST00000237358.2
ENSMUST00000237502.2
CDS-3UTR TCA 90 bp ACTAGCGCCCAGGAAACGGGAGCGGGAGGCACACTGGAAGCCAGTTTGGCCTACTTGGTGGTCTTGGCATaGTGTACCTTCTCCGTGGTG +
Preference number: 4 (lower is better)
Translates to: TSAQETGAGGTLEASLAYLVVLA*CTFSVV
Trigger: CACCACGGAGAAGGTACATCATGCCAAGACCACCAA...GTAGGCCAAACTGGCTTCCAGTGTGCCTCCCGCTCCCGTTTCCTGGGCGCTAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000235766.3
ENSMUST00000236586.3
ENSMUST00000237358.2
ENSMUST00000237502.2
ENSMUST00000237680.2
CDS-3UTR TCA 90 bp CGCCCAGGAAACGGGAGCGGGAGGCACACTGGAAGCCAGTTTGGCCTACATAGGTTGGTGGTCTTGGCATaGTGTACCTTCTCCGTGGTG +
Preference number: 4 (lower is better)
Translates to: RPGNGSGRHTGSQFGLHRLVVLA*CTFSVV
Trigger: CACCACGGAGAAGGTACATCATGCCAAGACCACCAA...CCTATGTAGGCCAAACTGGCTTCCAGTGTGCCTCCCGCTCCCGTTTCCTGGGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000235766.3
ENSMUST00000236586.3
ENSMUST00000237358.2
ENSMUST00000237502.2
ENSMUST00000237680.2
CDS-3UTR CCA 90 bp ACTAGCGCCCAGGAAACGGGAGCGGGAGGCACACTGGAAGCCAGTTTGGCCTACAGCTGCTGCCTGTGGTaGAGCAGCTATACTGTGGAT +
Preference number: 4 (lower is better)
Translates to: TSAQETGAGGTLEASLAYSCCLW*SSYTVD
Trigger: ATCCACAGTATAGCTGCTCCACCACAGGCAGCAGCT...GTAGGCCAAACTGGCTTCCAGTGTGCCTCCCGCTCCCGTTTCCTGGGCGCTAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000025484.9
ENSMUST00000235766.3
ENSMUST00000236586.3
ENSMUST00000237358.2
ENSMUST00000237502.2
CDS-3UTR CCA 90 bp TCTGTGATGCTAACTAGCGCCCAGGAAACGGGAGCGGGAGGCACACTGGAAGCCTGGTCTGCAAAGCACTaGATGAGGAGGGGGTGTGTG +
Preference number: 4 (lower is better)
Translates to: SVMLTSAQETGAGGTLEAWSAKH*MRRGCV
Trigger: CACACACCCCCTCCTCATCCAGTGCTTTGCAGACCA...GGCTTCCAGTGTGCCTCCCGCTCCCGTTTCCTGGGCGCTAGTTAGCATCACAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000025484.9
ENSMUST00000235766.3
ENSMUST00000236586.3
ENSMUST00000237358.2
ENSMUST00000237502.2
CDS-3UTR CCA 90 bp CGCCCAGGAAACGGGAGCGGGAGGCACACTGGAAGCCAGTTTGGCCTACATAGGGACATCGGCAGGGAGTaGGCAGAAAACAGAATGACC +
Preference number: 4 (lower is better)
Translates to: RPGNGSGRHTGSQFGLHRDIGRE*AENRMT
Trigger: GGTCATTCTGTTTTCTGCCCACTCCCTGCCGATGTC...CCTATGTAGGCCAAACTGGCTTCCAGTGTGCCTCCCGCTCCCGTTTCCTGGGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000025484.9
ENSMUST00000235766.3
ENSMUST00000235947.2
ENSMUST00000236586.3
ENSMUST00000237358.2
ENSMUST00000237502.2
CDS-3UTR CCA 90 bp TCTGTGATGCTAACTAGCGCCCAGGAAACGGGAGCGGGAGGCACACTGGAAGCCCCAGTCGGTAGGGGTTaGGGTAACCCAGCTTTTCCA +
Preference number: 4 (lower is better)
Translates to: SVMLTSAQETGAGGTLEAPVGRG*GNPAFP
Trigger: TGGAAAAGCTGGGTTACCCCAACCCCTACCGACTGG...GGCTTCCAGTGTGCCTCCCGCTCCCGTTTCCTGGGCGCTAGTTAGCATCACAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000025484.9
ENSMUST00000235766.3
ENSMUST00000235947.2
ENSMUST00000236586.3
ENSMUST00000237358.2
ENSMUST00000237502.2
CDS-3UTR CCA 90 bp CCCCATCGTCCCCACCGCAGGTGTCTGGAGGCTGCACATCTGCAAATCCCACGGGAGCTTGGGGTTTGGTaGTCTTGGCATGATGTACCT +
Preference number: 4 (lower is better)
Translates to: PHRPHRRCLEAAHLQIPRELGVW*SWHDVP
Trigger: AGGTACATCATGCCAAGACCACCAAACCCCAAGCTC...CCGTGGGATTTGCAGATGTGCAGCCTCCAGACACCTGCGGTGGGGACGATGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000235766.3
ENSMUST00000236586.3
ENSMUST00000237358.2
ENSMUST00000237502.2
ENSMUST00000237680.2
CDS-3UTR TCA 90 bp TCTGTGATGCTAACTAGCGCCCAGGAAACGGGAGCGGGAGGCACACTGGAAGCCGAATGGGAAGTGTCATaGGGTCTCGGTCCAGGAAGA +
Preference number: 4 (lower is better)
Translates to: SVMLTSAQETGAGGTLEAEWEVS*GLGPGR
Trigger: TCTTCCTGGACCGAGACCTCATGACACTTCCCATTC...GGCTTCCAGTGTGCCTCCCGCTCCCGTTTCCTGGGCGCTAGTTAGCATCACAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000025484.9
ENSMUST00000235215.2
ENSMUST00000235766.3
ENSMUST00000236586.3
ENSMUST00000237358.2
ENSMUST00000237502.2
ENSMUST00000237680.2
CDS-3UTR TCA 90 bp CCCATCGTCCCCACCGCAGGTGTCTGGAGGCTGCACATCTGCAAATCCCACGGGTTCGGCGTTTGGCGATaGATGGTGCCAGCTTATTTT +
Preference number: 4 (lower is better)
Translates to: PIVPTAGVWRLHICKSHGFGVWR*MVPAYF
Trigger: AAAATAAGCTGGCACCATTCATCGCCAAACGCCGAA...CCCGTGGGATTTGCAGATGTGCAGCCTCCAGACACCTGCGGTGGGGACGATGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000025484.9
ENSMUST00000235766.3
ENSMUST00000236586.3
ENSMUST00000237358.2
ENSMUST00000237502.2
CDS-3UTR TCA 90 bp TGTCTGGAGGCTGCACATCTGCAAATCCCACGGGTCCTCAGGCAGGGTCACAGCCTGCGATACTGCTCTTaGATTTTGGGGGTTCGGCGT +
Preference number: 4 (lower is better)
Translates to: CLEAAHLQIPRVLRQGHSLRYCS*ILGVRR
Trigger: ACGCCGAACCCCCAAAATTCAAGAGCAGTATCGCAG...GCTGTGACCCTGCCTGAGGACCCGTGGGATTTGCAGATGTGCAGCCTCCAGACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000235766.3
ENSMUST00000237502.2
CDS-3UTR TCA 90 bp GACTCTTGCAGTCACCACAGTGGCAGTGGACAGTGGCTACACTGTCAACAGAAGCTGCAAAGCACTGGATaGGGAGGGGGTGTGTGGGCC +
Preference number: 4 (lower is better)
Translates to: DSCSHHSGSGQWLHCQQKLQSTG*GGGVWA
Trigger: GGCCCACACACCCCCTCCTCATCCAGTGCTTTGCAG...CTTCTGTTGACAGTGTAGCCACTGTCCACTGCCACTGTGGTGACTGCAAGAGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000025484.9
ENSMUST00000235766.3
ENSMUST00000236586.3
ENSMUST00000237502.2
CDS-3UTR GCA 90 bp TTCCTTGGCCCCTGGGGAGCTAAGCCCATATCCATCAGTAGCATTTCCTGGTGGGACTGGATGTGGGAGTaGACCAGATCAGCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: FLGPWGAKPISISSISWWDWMWE*TRSARA
Trigger: GGCCCTGGCTGATCTGGTGCACTCCCACATCCAGTC...CCACCAGGAAATGCTACTGATGGATATGGGCTTAGCTCCCCAGGGGCCAAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000235766.3
ENSMUST00000236586.3
CDS-3UTR CCA 90 bp GTGTCTGGAGGCTGCACATCTGCAAATCCCACGGGTCCTCAGGCAGGGTCACAGAGCTGCTGCCTGTGGTaGAGCAGCTATACTGTGGAT +
Preference number: 4 (lower is better)
Translates to: VSGGCTSANPTGPQAGSQSCCLW*SSYTVD
Trigger: ATCCACAGTATAGCTGCTCCACCACAGGCAGCAGCT...CTGTGACCCTGCCTGAGGACCCGTGGGATTTGCAGATGTGCAGCCTCCAGACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000235766.3
ENSMUST00000237502.2
CDS-3UTR CCA 90 bp CCATCGTCCCCACCGCAGGTGTCTGGAGGCTGCACATCTGCAAATCCCACGGGTTTAAGCTGCTGCCTGTaGTGGAGCAGCTATACTGTG +
Preference number: 4 (lower is better)
Translates to: PSSPPQVSGGCTSANPTGLSCCL*WSSYTV
Trigger: CACAGTATAGCTGCTCCACCACAGGCAGCAGCTTAA...ACCCGTGGGATTTGCAGATGTGCAGCCTCCAGACACCTGCGGTGGGGACGATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000025484.9
ENSMUST00000235766.3
ENSMUST00000236586.3
ENSMUST00000237358.2
ENSMUST00000237502.2
CDS-3UTR CCA 90 bp GGAGATGAGACTCTTGCAGTCACCACAGTGGCAGTGGACAGTGGCTACACTGTCGATGTACCTTCTCCGTaGTGGCTGCCACCGCAGCAC +
Preference number: 4 (lower is better)
Translates to: GDETLAVTTVAVDSGYTVDVPSP*WLPPQH
Trigger: GTGCTGCGGTGGCAGCCACCACGGAGAAGGTACATC...GACAGTGTAGCCACTGTCCACTGCCACTGTGGTGACTGCAAGAGTCTCATCTCC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000235766.3
ENSMUST00000236586.3
ENSMUST00000237502.2
CDS-3UTR CCA 90 bp TCCCCATCGTCCCCACCGCAGGTGTCTGGAGGCTGCACATCTGCAAATCCCACGGAGCTTGGGGTTTGGTaGTCTTGGCATGATGTACCT +
Preference number: 4 (lower is better)
Translates to: SPSSPPQVSGGCTSANPTELGVW*SWHDVP
Trigger: AGGTACATCATGCCAAGACCACCAAACCCCAAGCTC...CGTGGGATTTGCAGATGTGCAGCCTCCAGACACCTGCGGTGGGGACGATGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000235766.3
ENSMUST00000236586.3
ENSMUST00000237358.2
ENSMUST00000237502.2
ENSMUST00000237680.2
CDS-3UTR TCA 90 bp GTCCCCATCGTCCCCACCGCAGGTGTCTGGAGGCTGCACATCTGCAAATCCCACTTCGGCGTTTGGCGATaGATGGTGCCAGCTTATTTT +
Preference number: 4 (lower is better)
Translates to: VPIVPTAGVWRLHICKSHFGVWR*MVPAYF
Trigger: AAAATAAGCTGGCACCATTCATCGCCAAACGCCGAA...GTGGGATTTGCAGATGTGCAGCCTCCAGACACCTGCGGTGGGGACGATGGGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000025484.9
ENSMUST00000235766.3
ENSMUST00000236586.3
ENSMUST00000237358.2
ENSMUST00000237502.2
CDS-3UTR TCA 90 bp GACTCTTGCAGTCACCACAGTGGCAGTGGACAGTGGCTACACTGTCAACAGAAGAGGGGTCCCCTCTGTTaGCAACAGACATCGGCAGGG +
Preference number: 4 (lower is better)
Translates to: DSCSHHSGSGQWLHCQQKRGPLC*QQTSAG
Trigger: CCCTGCCGATGTCTGTTGTCAACAGAGGGGACCCCT...CTTCTGTTGACAGTGTAGCCACTGTCCACTGCCACTGTGGTGACTGCAAGAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000025484.9
ENSMUST00000235766.3
ENSMUST00000235947.2
ENSMUST00000236586.3
ENSMUST00000237502.2
CDS-3UTR TCA 90 bp TGGCAGTGGACAGTGGCTACACTGTCAACAGAAGCAGTGCCAGGTGACCGCTCCTTGGTGGTCTTGGCATaGTGTACCTTCTCCGTGGTG +
Preference number: 4 (lower is better)
Translates to: WQWTVATLSTEAVPGDRSLVVLA*CTFSVV
Trigger: CACCACGGAGAAGGTACATCATGCCAAGACCACCAA...GGAGCGGTCACCTGGCACTGCTTCTGTTGACAGTGTAGCCACTGTCCACTGCCA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000235766.3
ENSMUST00000236586.3
ENSMUST00000237502.2
CDS-3UTR GCA 90 bp TGTCTGGAGGCTGCACATCTGCAAATCCCACGGGTCCTCAGGCAGGGTCACAGCAAATGGCATTTAAGCTaGTGCCTGTGGTGGAGCAGC +
Preference number: 4 (lower is better)
Translates to: CLEAAHLQIPRVLRQGHSKWHLS*CLWWSS
Trigger: GCTGCTCCACCACAGGCAGCAGCTTAAATGCCATTT...GCTGTGACCCTGCCTGAGGACCCGTGGGATTTGCAGATGTGCAGCCTCCAGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000235766.3
ENSMUST00000237502.2
CDS-3UTR CCA 90 bp AGGCTGTGGGTCTTTCTGGTGACCCTGCTGGGCGTTTGGGACAGTATGCTCCCTAGCTGCTGCCTGTGGTaGAGCAGCTATACTGTGGAT +
Preference number: 4 (lower is better)
Translates to: RLWVFLVTLLGVWDSMLPSCCLW*SSYTVD
Trigger: ATCCACAGTATAGCTGCTCCACCACAGGCAGCAGCT...AGGGAGCATACTGTCCCAAACGCCCAGCAGGGTCACCAGAAAGACCCACAGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000235766.3
ENSMUST00000236586.3
CDS-3UTR CCA 90 bp TCTGTGATGCTAACTAGCGCCCAGGAAACGGGAGCGGGAGGCACACTGGAAGCCTTAAGCTGCTGCCTGTaGTGGAGCAGCTATACTGTG +
Preference number: 4 (lower is better)
Translates to: SVMLTSAQETGAGGTLEALSCCL*WSSYTV
Trigger: CACAGTATAGCTGCTCCACCACAGGCAGCAGCTTAA...GGCTTCCAGTGTGCCTCCCGCTCCCGTTTCCTGGGCGCTAGTTAGCATCACAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000025484.9
ENSMUST00000235766.3
ENSMUST00000236586.3
ENSMUST00000237358.2
ENSMUST00000237502.2
CDS-3UTR CCA 90 bp CAATGTTGTATGTCTGTGATGCTAACTAGCGCCCAGGAAACGGGAGCGGGAGGCTGCTCCACTTCATGGTaGGCTTCTGGCCCACCTCGT +
Preference number: 4 (lower is better)
Translates to: QCCMSVMLTSAQETGAGGCSTSW*ASGPPR
Trigger: ACGAGGTGGGCCAGAAGCCCACCATGAAGTGGAGCA...GCCTCCCGCTCCCGTTTCCTGGGCGCTAGTTAGCATCACAGACATACAACATTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000025484.9
ENSMUST00000235766.3
ENSMUST00000236586.3
ENSMUST00000237358.2
ENSMUST00000237502.2
CDS-3UTR CCA 90 bp GTCACCACAGTGGCAGTGGACAGTGGCTACACTGTCAACAGAAGCAGTGCCAGGTTGTGCTCCACTTCATaGTGGGCTTCTGGCCCACCT +
Preference number: 4 (lower is better)
Translates to: VTTVAVDSGYTVNRSSARLCSTS*WASGPP
Trigger: AGGTGGGCCAGAAGCCCACCATGAAGTGGAGCACAA...CCTGGCACTGCTTCTGTTGACAGTGTAGCCACTGTCCACTGCCACTGTGGTGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000025484.9
ENSMUST00000235766.3
ENSMUST00000236586.3
ENSMUST00000237502.2
CDS-3UTR CCA 90 bp AGGGGACTGGGGGAAGGGATAATGGCTGTGTGCATAGCTGTCTGCCAACAGGAGTTGTGCTCCACTTCATaGTGGGCTTCTGGCCCACCT +
Preference number: 4 (lower is better)
Translates to: RGLGEGIMAVCIAVCQQELCSTS*WASGPP
Trigger: AGGTGGGCCAGAAGCCCACCATGAAGTGGAGCACAA...CTCCTGTTGGCAGACAGCTATGCACACAGCCATTATCCCTTCCCCCAGTCCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000235766.3
ENSMUST00000236586.3
CDS-3UTR CCA 90 bp GCAGTCACCACAGTGGCAGTGGACAGTGGCTACACTGTCAACAGAAGCAGTGCCTGGTCTGCAAAGCACTaGATGAGGAGGGGGTGTGTG +
Preference number: 4 (lower is better)
Translates to: AVTTVAVDSGYTVNRSSAWSAKH*MRRGCV
Trigger: CACACACCCCCTCCTCATCCAGTGCTTTGCAGACCA...GGCACTGCTTCTGTTGACAGTGTAGCCACTGTCCACTGCCACTGTGGTGACTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000025484.9
ENSMUST00000235766.3
ENSMUST00000236586.3
ENSMUST00000237502.2
CDS-3UTR CCA 90 bp TGGCAGTGGACAGTGGCTACACTGTCAACAGAAGCAGTGCCAGGTGACCGCTCCGTACTGGACCAACCTTaGACTGCCAAACCAGTCGGT +
Preference number: 4 (lower is better)
Translates to: WQWTVATLSTEAVPGDRSVLDQP*TAKPVG
Trigger: ACCGACTGGTTTGGCAGTCCAAGGTTGGTCCAGTAC...GGAGCGGTCACCTGGCACTGCTTCTGTTGACAGTGTAGCCACTGTCCACTGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000025484.9
ENSMUST00000235947.2
ENSMUST00000236586.3
ENSMUST00000237502.2
CDS-3UTR CCA 90 bp GACTCTTGCAGTCACCACAGTGGCAGTGGACAGTGGCTACACTGTCAACAGAAGGATGTACCTTCTCCGTaGTGGCTGCCACCGCAGCAC +
Preference number: 4 (lower is better)
Translates to: DSCSHHSGSGQWLHCQQKDVPSP*WLPPQH
Trigger: GTGCTGCGGTGGCAGCCACCACGGAGAAGGTACATC...CTTCTGTTGACAGTGTAGCCACTGTCCACTGCCACTGTGGTGACTGCAAGAGTC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000235766.3
ENSMUST00000236586.3
ENSMUST00000237502.2
3UTR CAA 72 bp CAGGCTGTGGGTCTTTCTGGTGACCCTGCTGGGCGTTaGGGACAGTATGCTCCCTTGCCTCATGGTGTGATA +
Preference number: 4 (lower is better)
Translates to: QAVGLSGDPAGR*GQYAPLPHGVI
Trigger: TATCACACCATGAGGCAAGGGAGCATACTGTCCCAAACGCCCAGCAGGGTCACCAGAAAGACCCACAGCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000235766.3
ENSMUST00000236586.3
3UTR CAA 72 bp GGAGTCAAGGGCCCTCCCTGCAAGTATTCCCTGAGCTaGTCCCGGGAAGATTGCTCCAGATGGGCGTTTCTT +
Preference number: 4 (lower is better)
Translates to: GVKGPPCKYSLS*SREDCSRWAFL
Trigger: AAGAAACGCCCATCTGGAGCAATCTTCCCGGGACAAGCTCAGGGAATACTTGCAGGGAGGGCCCTTGACTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237502.2
CDS-3UTR TCA 90 bp CTGGAGGCTGCACATCTGCAAATCCCACGGGTCCTCAGGCAGGGTCACAGCTGTTTCGGCGTTTGGCGATaGATGGTGCCAGCTTATTTT +
Preference number: 4 (lower is better)
Translates to: LEAAHLQIPRVLRQGHSCFGVWR*MVPAYF
Trigger: AAAATAAGCTGGCACCATTCATCGCCAAACGCCGAA...ACAGCTGTGACCCTGCCTGAGGACCCGTGGGATTTGCAGATGTGCAGCCTCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000235766.3
ENSMUST00000237502.2
CDS-3UTR TCA 90 bp TCGTGTTTTGTGTTTGATGCAGGTGAGCACATGATCCCAAGCTGTGCGCTCAGCAGGGGTCCCCTCTGTTaGCAACAGACATCGGCAGGG +
Preference number: 4 (lower is better)
Translates to: SCFVFDAGEHMIPSCALSRGPLC*QQTSAG
Trigger: CCCTGCCGATGTCTGTTGTCAACAGAGGGGACCCCT...GCTGAGCGCACAGCTTGGGATCATGTGCTCACCTGCATCAAACACAAAACACGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000025484.9
ENSMUST00000235766.3
ENSMUST00000235947.2
ENSMUST00000236586.3
ENSMUST00000237502.2
CDS-3UTR TCA 90 bp TCTATCCTCCAAGGAACACAATGTTGTATGTCTGTGATGCTAACTAGCGCCCAGTGGCTGACAGGCCCTTaGGCTGCCGTGCACCAGCGG +
Preference number: 4 (lower is better)
Translates to: SILQGTQCCMSVMLTSAQWLTGP*AAVHQR
Trigger: CCGCTGGTGCACGGCAGCTCAAGGGCCTGTCAGCCA...CTGGGCGCTAGTTAGCATCACAGACATACAACATTGTGTTCCTTGGAGGATAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000235766.3
ENSMUST00000236586.3
ENSMUST00000237502.2
ENSMUST00000237680.2
CDS-3UTR GCA 90 bp TGGCAGTGGACAGTGGCTACACTGTCAACAGAAGCAGTGCCAGGTGACCGCTCCCAGTTCAGACTCAACTaGGTGGAGCACAGCTTGTTG +
Preference number: 4 (lower is better)
Translates to: WQWTVATLSTEAVPGDRSQFRLN*VEHSLL
Trigger: CAACAAGCTGTGCTCCACGCAGTTGAGTCTGAACTG...GGAGCGGTCACCTGGCACTGCTTCTGTTGACAGTGTAGCCACTGTCCACTGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000025484.9
ENSMUST00000236586.3
CDS-3UTR CCA 90 bp CGTCCCCACCGCAGGTGTCTGGAGGCTGCACATCTGCAAATCCCACGGGTCCTCGGAGCAGCTATACTGTaGATACTGTGTGAAAGCAAT +
Preference number: 4 (lower is better)
Translates to: RPHRRCLEAAHLQIPRVLGAAIL*ILCESN
Trigger: ATTGCTTTCACACAGTATCCACAGTATAGCTGCTCC...GAGGACCCGTGGGATTTGCAGATGTGCAGCCTCCAGACACCTGCGGTGGGGACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000025484.9
ENSMUST00000235766.3
ENSMUST00000235947.2
ENSMUST00000236586.3
ENSMUST00000237358.2
ENSMUST00000237502.2
CDS-3UTR CCA 90 bp CCACAGTGGCAGTGGACAGTGGCTACACTGTCAACAGAAGCAGTGCCAGGTGACGACATCGGCAGGGAGTaGGCAGAAAACAGAATGACC +
Preference number: 4 (lower is better)
Translates to: PQWQWTVATLSTEAVPGDDIGRE*AENRMT
Trigger: GGTCATTCTGTTTTCTGCCCACTCCCTGCCGATGTC...GTCACCTGGCACTGCTTCTGTTGACAGTGTAGCCACTGTCCACTGCCACTGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000025484.9
ENSMUST00000235766.3
ENSMUST00000235947.2
ENSMUST00000236586.3
ENSMUST00000237502.2
CDS-3UTR CCA 90 bp CCATCGTCCCCACCGCAGGTGTCTGGAGGCTGCACATCTGCAAATCCCACGGGTTTTTCCATGACTTTGTaGACAGTGGCTCCTACCTCT +
Preference number: 4 (lower is better)
Translates to: PSSPPQVSGGCTSANPTGFSMTL*TVAPTS
Trigger: AGAGGTAGGAGCCACTGTCCACAAAGTCATGGAAAA...ACCCGTGGGATTTGCAGATGTGCAGCCTCCAGACACCTGCGGTGGGGACGATGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000025484.9
ENSMUST00000235766.3
ENSMUST00000235947.2
ENSMUST00000236586.3
ENSMUST00000237358.2
ENSMUST00000237502.2
CDS-3UTR CCA 90 bp GTCCCCATCGTCCCCACCGCAGGTGTCTGGAGGCTGCACATCTGCAAATCCCACTTTTCCATGACTTTGTaGACAGTGGCTCCTACCTCT +
Preference number: 4 (lower is better)
Translates to: VPIVPTAGVWRLHICKSHFSMTL*TVAPTS
Trigger: AGAGGTAGGAGCCACTGTCCACAAAGTCATGGAAAA...GTGGGATTTGCAGATGTGCAGCCTCCAGACACCTGCGGTGGGGACGATGGGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000025484.9
ENSMUST00000235766.3
ENSMUST00000235947.2
ENSMUST00000236586.3
ENSMUST00000237358.2
ENSMUST00000237502.2
CDS-3UTR CCA 90 bp CACAGGCAAGAGAGAAATCACAGTTTGTGCCCAGACAAACGTGGCTTCTGTCCCGATGTACCTTCTCCGTaGTGGCTGCCACCGCAGCAC +
Preference number: 4 (lower is better)
Translates to: HRQERNHSLCPDKRGFCPDVPSP*WLPPQH
Trigger: GTGCTGCGGTGGCAGCCACCACGGAGAAGGTACATC...GGGACAGAAGCCACGTTTGTCTGGGCACAAACTGTGATTTCTCTCTTGCCTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000235766.3
ENSMUST00000236586.3
ENSMUST00000237358.2
ENSMUST00000237502.2
ENSMUST00000237680.2
CDS-3UTR TCA 90 bp GCAAATCCCACGGGTCCTCAGGCAGGGTCACAGCTGTTGGCTGGTGAAGAAGGATTCGGCGTTTGGCGATaGATGGTGCCAGCTTATTTT +
Preference number: 4 (lower is better)
Translates to: ANPTGPQAGSQLLAGEEGFGVWR*MVPAYF
Trigger: AAAATAAGCTGGCACCATTCATCGCCAAACGCCGAA...TCCTTCTTCACCAGCCAACAGCTGTGACCCTGCCTGAGGACCCGTGGGATTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000235766.3
ENSMUST00000237502.2
CDS-3UTR TCA 90 bp TCAGTTTCCAGGGAGGGAGATGAGACTCTTGCAGTCACCACAGTGGCAGTGGACCTGCGATACTGCTCTTaGATTTTGGGGGTTCGGCGT +
Preference number: 4 (lower is better)
Translates to: SVSREGDETLAVTTVAVDLRYCS*ILGVRR
Trigger: ACGCCGAACCCCCAAAATTCAAGAGCAGTATCGCAG...GTCCACTGCCACTGTGGTGACTGCAAGAGTCTCATCTCCCTCCCTGGAAACTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000025484.9
ENSMUST00000235766.3
ENSMUST00000236586.3
ENSMUST00000237502.2
CDS-3UTR TCA 90 bp AAGAGAGAAATCACAGTTTGTGCCCAGACAAACGTGGCTTCTGTCCCCATCGTCAGGGGTCCCCTCTGTTaGCAACAGACATCGGCAGGG +
Preference number: 4 (lower is better)
Translates to: KREITVCAQTNVASVPIVRGPLC*QQTSAG
Trigger: CCCTGCCGATGTCTGTTGTCAACAGAGGGGACCCCT...GACGATGGGGACAGAAGCCACGTTTGTCTGGGCACAAACTGTGATTTCTCTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000025484.9
ENSMUST00000235766.3
ENSMUST00000235947.2
ENSMUST00000236586.3
ENSMUST00000237358.2
ENSMUST00000237502.2
CDS-3UTR TCA 90 bp AAAACACAGGCAAGAGAGAAATCACAGTTTGTGCCCAGACAAACGTGGCTTCTGTGGCTGACAGGCCCTTaGGCTGCCGTGCACCACTGG +
Preference number: 4 (lower is better)
Translates to: KTQAREKSQFVPRQTWLLWLTGP*AAVHHW
Trigger: CCAGTGGTGCACGGCAGCTCAAGGGCCTGTCAGCCA...CAGAAGCCACGTTTGTCTGGGCACAAACTGTGATTTCTCTCTTGCCTGTGTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000237358.2
CDS-3UTR GCA 90 bp CGCCCAGGAAACGGGAGCGGGAGGCACACTGGAAGCCAGTTTGGCCTACATAGGGTGGTCACTGGTAAATaGTATTGGAACCAAGAGGAT +
Preference number: 4 (lower is better)
Translates to: RPGNGSGRHTGSQFGLHRVVTGK*YWNQED
Trigger: ATCCTCTTGGTTCCAATAGCATTTACCAGTGACCAC...CCTATGTAGGCCAAACTGGCTTCCAGTGTGCCTCCCGCTCCCGTTTCCTGGGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000025484.9
ENSMUST00000236586.3
ENSMUST00000237358.2
ENSMUST00000237502.2
CDS-3UTR CCA 90 bp GGGAGGGAGATGAGACTCTTGCAGTCACCACAGTGGCAGTGGACAGTGGCTACAACTGCTCTTGAATTTTaGGGGTTCGGCGTTTGGCGA +
Preference number: 4 (lower is better)
Translates to: GREMRLLQSPQWQWTVATTALEF*GFGVWR
Trigger: TCGCCAAACGCCGAACCCCCAAAATTCAAGAGCAGT...TGTAGCCACTGTCCACTGCCACTGTGGTGACTGCAAGAGTCTCATCTCCCTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000025484.9
ENSMUST00000235766.3
ENSMUST00000236586.3
ENSMUST00000237502.2
CDS-3UTR CCA 90 bp CTTGTTTCAGTTTCCAGGGAGGGAGATGAGACTCTTGCAGTCACCACAGTGGCATGCTCCACTTCATGGTaGGCTTCTGGCCCACCTCGT +
Preference number: 4 (lower is better)
Translates to: LVSVSREGDETLAVTTVACSTSW*ASGPPR
Trigger: ACGAGGTGGGCCAGAAGCCCACCATGAAGTGGAGCA...TGCCACTGTGGTGACTGCAAGAGTCTCATCTCCCTCCCTGGAAACTGAAACAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000025484.9
ENSMUST00000235766.3
ENSMUST00000236586.3
ENSMUST00000237502.2
CDS-3UTR CCA 90 bp TCAGTTTCCAGGGAGGGAGATGAGACTCTTGCAGTCACCACAGTGGCAGTGGACGACATCGGCAGGGAGTaGGCAGAAAACAGAATGACC +
Preference number: 4 (lower is better)
Translates to: SVSREGDETLAVTTVAVDDIGRE*AENRMT
Trigger: GGTCATTCTGTTTTCTGCCCACTCCCTGCCGATGTC...GTCCACTGCCACTGTGGTGACTGCAAGAGTCTCATCTCCCTCCCTGGAAACTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000025484.9
ENSMUST00000235766.3
ENSMUST00000235947.2
ENSMUST00000236586.3
ENSMUST00000237502.2
CDS-3UTR CCA 90 bp CAATGTTGTATGTCTGTGATGCTAACTAGCGCCCAGGAAACGGGAGCGGGAGGCGACATCGGCAGGGAGTaGGCAGAAAACAGAATGACC +
Preference number: 4 (lower is better)
Translates to: QCCMSVMLTSAQETGAGGDIGRE*AENRMT
Trigger: GGTCATTCTGTTTTCTGCCCACTCCCTGCCGATGTC...GCCTCCCGCTCCCGTTTCCTGGGCGCTAGTTAGCATCACAGACATACAACATTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000025484.9
ENSMUST00000235766.3
ENSMUST00000235947.2
ENSMUST00000236586.3
ENSMUST00000237358.2
ENSMUST00000237502.2
CDS-3UTR CCA 90 bp TCGTGTTTTGTGTTTGATGCAGGTGAGCACATGATCCCAAGCTGTGCGCTCAGCGCCCAACCAGGGTACTaGACCAACCTTGGACTGCCA +
Preference number: 4 (lower is better)
Translates to: SCFVFDAGEHMIPSCALSAQPGY*TNLGLP
Trigger: TGGCAGTCCAAGGTTGGTCCAGTACCCTGGTTGGGC...GCTGAGCGCACAGCTTGGGATCATGTGCTCACCTGCATCAAACACAAAACACGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000025484.9
ENSMUST00000235947.2
ENSMUST00000236586.3
ENSMUST00000237502.2
CDS-3UTR CCA 90 bp ACAGGCAAGAGAGAAATCACAGTTTGTGCCCAGACAAACGTGGCTTCTGTCCCCGCCCAACCAGGGTACTaGACCAACCTTGGACTGCCA +
Preference number: 4 (lower is better)
Translates to: TGKREITVCAQTNVASVPAQPGY*TNLGLP
Trigger: TGGCAGTCCAAGGTTGGTCCAGTACCCTGGTTGGGC...GGGGACAGAAGCCACGTTTGTCTGGGCACAAACTGTGATTTCTCTCTTGCCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000025484.9
ENSMUST00000235947.2
ENSMUST00000236586.3
ENSMUST00000237358.2
ENSMUST00000237502.2
CDS-3UTR CCA 90 bp GCAAATCCCACGGGTCCTCAGGCAGGGTCACAGCTGTTGGCTGGTGAAGAAGGATCACTGGTAAATGCTTaGACTGCCAAACCAGTCGGT +
Preference number: 4 (lower is better)
Translates to: ANPTGPQAGSQLLAGEEGSLVNA*TAKPVG
Trigger: ACCGACTGGTTTGGCAGTCCAAGCATTTACCAGTGA...TCCTTCTTCACCAGCCAACAGCTGTGACCCTGCCTGAGGACCCGTGGGATTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235766.3
CDS-3UTR TCA 90 bp AAGTTCCCTGAAAGGGGACTGGGGGAAGGGATAATGGCTGTGTGCATAGCTGTCCTGCGATACTGCTCTTaGATTTTGGGGGTTCGGCGT +
Preference number: 4 (lower is better)
Translates to: KFPERGLGEGIMAVCIAVLRYCS*ILGVRR
Trigger: ACGCCGAACCCCCAAAATTCAAGAGCAGTATCGCAG...GACAGCTATGCACACAGCCATTATCCCTTCCCCCAGTCCCCTTTCAGGGAACTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENSMUST00000235766.3
ENSMUST00000236586.3
CDS-3UTR TCA 90 bp CACAGGCAAGAGAGAAATCACAGTTTGTGCCCAGACAAACGTGGCTTCTGTCCCTGGAAGTCCACATCTTaGTGGGGGATCCACCTCCGA +
Preference number: 4 (lower is better)
Translates to: HRQERNHSLCPDKRGFCPWKSTS*WGIHLR
Trigger: TCGGAGGTGGATCCCCCATCAAGATGTGGACTTCCA...GGGACAGAAGCCACGTTTGTCTGGGCACAAACTGTGATTTCTCTCTTGCCTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000025484.9
ENSMUST00000235766.3
ENSMUST00000236586.3
ENSMUST00000237358.2
ENSMUST00000237502.2
CDS-3UTR TCA 90 bp GCACTCTTGAAACATGCACTTGTTTCAGTTTCCAGGGAGGGAGATGAGACTCTTCTGCAAAGCACTGGATaGGGAGGGGGTGTGTGGGCC +
Preference number: 4 (lower is better)
Translates to: ALLKHALVSVSREGDETLLQSTG*GGGVWA
Trigger: GGCCCACACACCCCCTCCTCATCCAGTGCTTTGCAG...AAGAGTCTCATCTCCCTCCCTGGAAACTGAAACAAGTGCATGTTTCAAGAGTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000025484.9
ENSMUST00000235766.3
ENSMUST00000236586.3
ENSMUST00000237502.2
CDS-3UTR TCA 90 bp AAAACACAGGCAAGAGAGAAATCACAGTTTGTGCCCAGACAAACGTGGCTTCTGCTGCAAAGCACTGGATaGGGAGGGGGTGTGTGGGCC +
Preference number: 4 (lower is better)
Translates to: KTQAREKSQFVPRQTWLLLQSTG*GGGVWA
Trigger: GGCCCACACACCCCCTCCTCATCCAGTGCTTTGCAG...CAGAAGCCACGTTTGTCTGGGCACAAACTGTGATTTCTCTCTTGCCTGTGTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000025484.9
ENSMUST00000235766.3
ENSMUST00000236586.3
ENSMUST00000237358.2
ENSMUST00000237502.2
CDS-3UTR TCA 90 bp TCACCACAGTGGCAGTGGACAGTGGCTACACTGTCAACAGAAGCAGTGCCAGGTAACCCAGCTTTTCCATaGCTTTGTGGACAGTGGCTC +
Preference number: 4 (lower is better)
Translates to: SPQWQWTVATLSTEAVPGNPAFP*LCGQWL
Trigger: GAGCCACTGTCCACAAAGTCATGGAAAAGCTGGGTT...ACCTGGCACTGCTTCTGTTGACAGTGTAGCCACTGTCCACTGCCACTGTGGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000025484.9
ENSMUST00000235766.3
ENSMUST00000235947.2
ENSMUST00000236586.3
ENSMUST00000237502.2
CDS-3UTR TCA 90 bp TCAGTTTCCAGGGAGGGAGATGAGACTCTTGCAGTCACCACAGTGGCAGTGGACAACCCAGCTTTTCCATaGCTTTGTGGACAGTGGCTC +
Preference number: 4 (lower is better)
Translates to: SVSREGDETLAVTTVAVDNPAFP*LCGQWL
Trigger: GAGCCACTGTCCACAAAGTCATGGAAAAGCTGGGTT...GTCCACTGCCACTGTGGTGACTGCAAGAGTCTCATCTCCCTCCCTGGAAACTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000025484.9
ENSMUST00000235766.3
ENSMUST00000235947.2
ENSMUST00000236586.3
ENSMUST00000237502.2
CDS-3UTR TCA 90 bp CACAGGCAAGAGAGAAATCACAGTTTGTGCCCAGACAAACGTGGCTTCTGTCCCATAGCCTCATCTGTCTaGGGGCCCAACCAGGGTACT +
Preference number: 4 (lower is better)
Translates to: HRQERNHSLCPDKRGFCPIASSV*GPNQGT
Trigger: AGTACCCTGGTTGGGCCCTCAGACAGATGAGGCTAT...GGGACAGAAGCCACGTTTGTCTGGGCACAAACTGTGATTTCTCTCTTGCCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000025484.9
ENSMUST00000236586.3
ENSMUST00000237358.2
ENSMUST00000237502.2
CDS-3UTR TCA 90 bp CTGGGATGTCCCAGTAGACAGATATTCCATATTGATAAATTGACCCCAGGATCATGGCTGACAGGCCCTTaGGCTGCCGTGCACCAGCGG +
Preference number: 4 (lower is better)
Translates to: LGCPSRQIFHIDKLTPGSWLTGP*AAVHQR
Trigger: CCGCTGGTGCACGGCAGCTCAAGGGCCTGTCAGCCA...TGATCCTGGGGTCAATTTATCAATATGGAATATCTGTCTACTGGGACATCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000235766.3
ENSMUST00000236586.3
ENSMUST00000237502.2
ENSMUST00000237680.2
CDS-3UTR CCA 90 bp ACAGGCAAGAGAGAAATCACAGTTTGTGCCCAGACAAACGTGGCTTCTGTCCCCCCAGTCGGTAGGGGTTaGGGTAACCCAGCTTTTCCA +
Preference number: 4 (lower is better)
Translates to: TGKREITVCAQTNVASVPPVGRG*GNPAFP
Trigger: TGGAAAAGCTGGGTTACCCCAACCCCTACCGACTGG...GGGGACAGAAGCCACGTTTGTCTGGGCACAAACTGTGATTTCTCTCTTGCCTGT
53% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENSMUST00000025484.9
ENSMUST00000235766.3
ENSMUST00000235947.2
ENSMUST00000236586.3
ENSMUST00000237358.2
ENSMUST00000237502.2
CDS-3UTR CCA 90 bp AAGAGAGAAATCACAGTTTGTGCCCAGACAAACGTGGCTTCTGTCCCCATCGTCGCCCAACCAGGGTACTaGACCAACCTTGGACTGCCA +
Preference number: 4 (lower is better)
Translates to: KREITVCAQTNVASVPIVAQPGY*TNLGLP
Trigger: TGGCAGTCCAAGGTTGGTCCAGTACCCTGGTTGGGC...GACGATGGGGACAGAAGCCACGTTTGTCTGGGCACAAACTGTGATTTCTCTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000025484.9
ENSMUST00000235947.2
ENSMUST00000236586.3
ENSMUST00000237358.2
ENSMUST00000237502.2
CDS-3UTR CCA 90 bp TGTATGTCTGTGATGCTAACTAGCGCCCAGGAAACGGGAGCGGGAGGCACACTGGATCAGCCAGGGCCTTaGAGAACAATGGATTTCCAT +
Preference number: 4 (lower is better)
Translates to: CMSVMLTSAQETGAGGTLDQPGP*RTMDFH
Trigger: ATGGAAATCCATTGTTCTCCAAGGCCCTGGCTGATC...CAGTGTGCCTCCCGCTCCCGTTTCCTGGGCGCTAGTTAGCATCACAGACATACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000025484.9
ENSMUST00000235766.3
ENSMUST00000236586.3
ENSMUST00000237358.2
CDS-3UTR CCA 90 bp CAATGTTGTATGTCTGTGATGCTAACTAGCGCCCAGGAAACGGGAGCGGGAGGCGAGCTTGGGGTTTGGTaGTCTTGGCATGATGTACCT +
Preference number: 4 (lower is better)
Translates to: QCCMSVMLTSAQETGAGGELGVW*SWHDVP
Trigger: AGGTACATCATGCCAAGACCACCAAACCCCAAGCTC...GCCTCCCGCTCCCGTTTCCTGGGCGCTAGTTAGCATCACAGACATACAACATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000235766.3
ENSMUST00000236586.3
ENSMUST00000237358.2
ENSMUST00000237502.2
ENSMUST00000237680.2
3UTR CAA 72 bp TTCACCATGCCTTCTCCTTGCTTGGAAGTCCACATCTaGATGGGGGATCCACCTCCGATTCTGCGATACTGC +
Preference number: 4 (lower is better)
Translates to: FTMPSPCLEVHI*MGDPPPILRYC
Trigger: GCAGTATCGCAGAATCGGAGGTGGATCCCCCATCAAGATGTGGACTTCCAAGCAAGGAGAAGGCATGGTGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000235215.2
ENSMUST00000237680.2
3UTR CAA 72 bp CACTCAGTCAAGATTAGGATGGCACTGGAAGGTTCCTaGGCCCCTGGGGAGCTAAGCCCATATCCATCAGTA +
Preference number: 4 (lower is better)
Translates to: HSVKIRMALEGS*APGELSPYPSV
Trigger: TACTGATGGATATGGGCTTAGCTCCCCAGGGGCCAAGGAACCTTCCAGTGCCATCCTAATCTTGACTGAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000235766.3
ENSMUST00000236586.3
3UTR CAA 72 bp TGTTCCACCTATAAGGTTGCAGACCCCTTTAGCTCCTaGGATACTTTCTCTAGCTCCTCCGTTGGGGGCCCT +
Preference number: 4 (lower is better)
Translates to: CSTYKVADPFSS*DTFSSSSVGGP
Trigger: AGGGCCCCCAACGGAGGAGCTAGAGAAAGTATCCAAGGAGCTAAAGGGGTCTGCAACCTTATAGGTGGAACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000235766.3
ENSMUST00000236586.3
3UTR CAA 72 bp TGTCTTGGCGTTCCCCTGTACTGGGGCATATACAGTTaGCGTGTTCAATGGGCCTCTCTTTCCACTGATGGC +
Preference number: 4 (lower is better)
Translates to: CLGVPLYWGIYS*RVQWASLSTDG
Trigger: GCCATCAGTGGAAAGAGAGGCCCATTGAACACGCAAACTGTATATGCCCCAGTACAGGGGAACGCCAAGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000235766.3
ENSMUST00000236586.3
CDS-3UTR TCA 90 bp GGAGATGAGACTCTTGCAGTCACCACAGTGGCAGTGGACAGTGGCTACACTGTCACTGTGGATACTGTGTaGAAGCAATGGCCCTCTCTA +
Preference number: 4 (lower is better)
Translates to: GDETLAVTTVAVDSGYTVTVDTV*KQWPSL
Trigger: TAGAGAGGGCCATTGCTTTCACACAGTATCCACAGT...GACAGTGTAGCCACTGTCCACTGCCACTGTGGTGACTGCAAGAGTCTCATCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000025484.9
ENSMUST00000235766.3
ENSMUST00000235947.2
ENSMUST00000236586.3
ENSMUST00000237502.2
CDS-3UTR TCA 90 bp AAGATAAAACACAGGCAAGAGAGAAATCACAGTTTGTGCCCAGACAAACGTGGCCTGCAAAGCACTGGATaGGGAGGGGGTGTGTGGGCC +
Preference number: 4 (lower is better)
Translates to: KIKHRQERNHSLCPDKRGLQSTG*GGGVWA
Trigger: GGCCCACACACCCCCTCCTCATCCAGTGCTTTGCAG...GCCACGTTTGTCTGGGCACAAACTGTGATTTCTCTCTTGCCTGTGTTTTATCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000025484.9
ENSMUST00000235766.3
ENSMUST00000236586.3
ENSMUST00000237358.2
ENSMUST00000237502.2
CDS-3UTR TCA 90 bp AAGAGAGAAATCACAGTTTGTGCCCAGACAAACGTGGCTTCTGTCCCCATCGTCATAGCCTCATCTGTCTaGGGGCCCAACCAGGGTACT +
Preference number: 4 (lower is better)
Translates to: KREITVCAQTNVASVPIVIASSV*GPNQGT
Trigger: AGTACCCTGGTTGGGCCCTCAGACAGATGAGGCTAT...GACGATGGGGACAGAAGCCACGTTTGTCTGGGCACAAACTGTGATTTCTCTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000025484.9
ENSMUST00000236586.3
ENSMUST00000237358.2
ENSMUST00000237502.2
CDS-3UTR TCA 90 bp CACAGGCAAGAGAGAAATCACAGTTTGTGCCCAGACAAACGTGGCTTCTGTCCCTTCCTCCTTTCTGGTTaGGCTTGGGGTTTGGTGGTC +
Preference number: 4 (lower is better)
Translates to: HRQERNHSLCPDKRGFCPFLLSG*AWGLVV
Trigger: GACCACCAAACCCCAAGCTCAACCAGAAAGGAGGAA...GGGACAGAAGCCACGTTTGTCTGGGCACAAACTGTGATTTCTCTCTTGCCTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000235766.3
ENSMUST00000236586.3
ENSMUST00000237358.2
ENSMUST00000237502.2
ENSMUST00000237680.2
CDS-3UTR TCA 90 bp CAGGTGTCTGGAGGCTGCACATCTGCAAATCCCACGGGTCCTCAGGCAGGGTCACATTGGACACATAAGTaGGTGGATTTTATTCCACCT +
Preference number: 4 (lower is better)
Translates to: QVSGGCTSANPTGPQAGSHWTHK*VDFIPP
Trigger: AGGTGGAATAAAATCCACTCACTTATGTGTCCAATG...TGACCCTGCCTGAGGACCCGTGGGATTTGCAGATGTGCAGCCTCCAGACACCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000237680.2
CDS-3UTR GCA 90 bp GACTCTTGCAGTCACCACAGTGGCAGTGGACAGTGGCTACACTGTCAACAGAAGAAATGGCATTTAAGCTaGTGCCTGTGGTGGAGCAGC +
Preference number: 4 (lower is better)
Translates to: DSCSHHSGSGQWLHCQQKKWHLS*CLWWSS
Trigger: GCTGCTCCACCACAGGCAGCAGCTTAAATGCCATTT...CTTCTGTTGACAGTGTAGCCACTGTCCACTGCCACTGTGGTGACTGCAAGAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000025484.9
ENSMUST00000235766.3
ENSMUST00000236586.3
ENSMUST00000237502.2
CDS-3UTR GCA 90 bp AAAACACAGGCAAGAGAGAAATCACAGTTTGTGCCCAGACAAACGTGGCTTCTGGACAGGCCCTTGAGCTaGCGTGCACCACTGGACCAT +
Preference number: 4 (lower is better)
Translates to: KTQAREKSQFVPRQTWLLDRPLS*RAPLDH
Trigger: ATGGTCCAGTGGTGCACGGCAGCTCAAGGGCCTGTC...CAGAAGCCACGTTTGTCTGGGCACAAACTGTGATTTCTCTCTTGCCTGTGTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000237358.2
CDS-3UTR CCA 90 bp GACTCTTGCAGTCACCACAGTGGCAGTGGACAGTGGCTACACTGTCAACAGAAGACTGCTCTTGAATTTTaGGGGTTCGGCGTTTGGCGA +
Preference number: 4 (lower is better)
Translates to: DSCSHHSGSGQWLHCQQKTALEF*GFGVWR
Trigger: TCGCCAAACGCCGAACCCCCAAAATTCAAGAGCAGT...CTTCTGTTGACAGTGTAGCCACTGTCCACTGCCACTGTGGTGACTGCAAGAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000025484.9
ENSMUST00000235766.3
ENSMUST00000236586.3
ENSMUST00000237502.2
CDS-3UTR CCA 90 bp GTTTCAGTTTCCAGGGAGGGAGATGAGACTCTTGCAGTCACCACAGTGGCAGTGTTAAGCTGCTGCCTGTaGTGGAGCAGCTATACTGTG +
Preference number: 4 (lower is better)
Translates to: VSVSREGDETLAVTTVAVLSCCL*WSSYTV
Trigger: CACAGTATAGCTGCTCCACCACAGGCAGCAGCTTAA...CACTGCCACTGTGGTGACTGCAAGAGTCTCATCTCCCTCCCTGGAAACTGAAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000025484.9
ENSMUST00000235766.3
ENSMUST00000236586.3
ENSMUST00000237502.2
CDS-3UTR CCA 90 bp AAGAGAGAAATCACAGTTTGTGCCCAGACAAACGTGGCTTCTGTCCCCATCGTCTTGTGCTCCACTTCATaGTGGGCTTCTGGCCCACCT +
Preference number: 4 (lower is better)
Translates to: KREITVCAQTNVASVPIVLCSTS*WASGPP
Trigger: AGGTGGGCCAGAAGCCCACCATGAAGTGGAGCACAA...GACGATGGGGACAGAAGCCACGTTTGTCTGGGCACAAACTGTGATTTCTCTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000025484.9
ENSMUST00000235766.3
ENSMUST00000236586.3
ENSMUST00000237358.2
ENSMUST00000237502.2
CDS-3UTR CCA 90 bp AGGCAAGAGAGAAATCACAGTTTGTGCCCAGACAAACGTGGCTTCTGTCCCCATTGGTCTGCAAAGCACTaGATGAGGAGGGGGTGTGTG +
Preference number: 4 (lower is better)
Translates to: RQERNHSLCPDKRGFCPHWSAKH*MRRGCV
Trigger: CACACACCCCCTCCTCATCCAGTGCTTTGCAGACCA...ATGGGGACAGAAGCCACGTTTGTCTGGGCACAAACTGTGATTTCTCTCTTGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000025484.9
ENSMUST00000235766.3
ENSMUST00000236586.3
ENSMUST00000237358.2
ENSMUST00000237502.2
CDS-3UTR CCA 90 bp TGTATGTCTGTGATGCTAACTAGCGCCCAGGAAACGGGAGCGGGAGGCACACTGTTTTCCATGACTTTGTaGACAGTGGCTCCTACCTCT +
Preference number: 4 (lower is better)
Translates to: CMSVMLTSAQETGAGGTLFSMTL*TVAPTS
Trigger: AGAGGTAGGAGCCACTGTCCACAAAGTCATGGAAAA...CAGTGTGCCTCCCGCTCCCGTTTCCTGGGCGCTAGTTAGCATCACAGACATACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000025484.9
ENSMUST00000235766.3
ENSMUST00000235947.2
ENSMUST00000236586.3
ENSMUST00000237358.2
ENSMUST00000237502.2
CDS-3UTR CCA 90 bp AGGCAAGAGAGAAATCACAGTTTGTGCCCAGACAAACGTGGCTTCTGTCCCCATCCAGTCGGTAGGGGTTaGGGTAACCCAGCTTTTCCA +
Preference number: 4 (lower is better)
Translates to: RQERNHSLCPDKRGFCPHPVGRG*GNPAFP
Trigger: TGGAAAAGCTGGGTTACCCCAACCCCTACCGACTGG...ATGGGGACAGAAGCCACGTTTGTCTGGGCACAAACTGTGATTTCTCTCTTGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000025484.9
ENSMUST00000235766.3
ENSMUST00000235947.2
ENSMUST00000236586.3
ENSMUST00000237358.2
ENSMUST00000237502.2
CDS-3UTR CCA 90 bp CAGTTCGTAGAGCGTCTCAATGTGGTCACTGGTAAATGCTATTGGAACCAAGAGGATGTACCTTCTCCGTaGTGGCTGCCACCGCAGCAC +
Preference number: 4 (lower is better)
Translates to: QFVERLNVVTGKCYWNQEDVPSP*WLPPQH
Trigger: GTGCTGCGGTGGCAGCCACCACGGAGAAGGTACATC...CTCTTGGTTCCAATAGCATTTACCAGTGACCACATTGAGACGCTCTACGAACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237680.2
CDS-3UTR CCA 90 bp TGTATGTCTGTGATGCTAACTAGCGCCCAGGAAACGGGAGCGGGAGGCACACTGCAATATGCCCGTTTTTaGCTTCCTCCTTTCTGGTTG +
Preference number: 4 (lower is better)
Translates to: CMSVMLTSAQETGAGGTLQYARF*LPPFWL
Trigger: CAACCAGAAAGGAGGAAGCCAAAAACGGGCATATTG...CAGTGTGCCTCCCGCTCCCGTTTCCTGGGCGCTAGTTAGCATCACAGACATACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000235766.3
ENSMUST00000236586.3
ENSMUST00000237358.2
ENSMUST00000237502.2
ENSMUST00000237680.2
CDS-3UTR TCA 90 bp AGGCAAGAGAGAAATCACAGTTTGTGCCCAGACAAACGTGGCTTCTGTCCCCATCTGCGATACTGCTCTTaGATTTTGGGGGTTCGGCGT +
Preference number: 4 (lower is better)
Translates to: RQERNHSLCPDKRGFCPHLRYCS*ILGVRR
Trigger: ACGCCGAACCCCCAAAATTCAAGAGCAGTATCGCAG...ATGGGGACAGAAGCCACGTTTGTCTGGGCACAAACTGTGATTTCTCTCTTGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000025484.9
ENSMUST00000235766.3
ENSMUST00000236586.3
ENSMUST00000237358.2
ENSMUST00000237502.2
CDS-3UTR GCA 90 bp GCAGTCACCACAGTGGCAGTGGACAGTGGCTACACTGTCAACAGAAGCAGTGCCTTTGGCGATGAATGGTaGCAGCTTATTTTGAATGGG +
Preference number: 4 (lower is better)
Translates to: AVTTVAVDSGYTVNRSSAFGDEW*QLILNG
Trigger: CCCATTCAAAATAAGCTGGCACCATTCATCGCCAAA...GGCACTGCTTCTGTTGACAGTGTAGCCACTGTCCACTGCCACTGTGGTGACTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000025484.9
ENSMUST00000235766.3
ENSMUST00000236586.3
ENSMUST00000237502.2
CDS-3UTR GCA 90 bp GTCACCACAGTGGCAGTGGACAGTGGCTACACTGTCAACAGAAGCAGTGCCAGGGTGGTCACTGGTAAATaGTATTGGAACCAAGAGGAT +
Preference number: 4 (lower is better)
Translates to: VTTVAVDSGYTVNRSSARVVTGK*YWNQED
Trigger: ATCCTCTTGGTTCCAATAGCATTTACCAGTGACCAC...CCTGGCACTGCTTCTGTTGACAGTGTAGCCACTGTCCACTGCCACTGTGGTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000025484.9
ENSMUST00000236586.3
ENSMUST00000237502.2
CDS-3UTR CCA 90 bp CACAGGCAAGAGAGAAATCACAGTTTGTGCCCAGACAAACGTGGCTTCTGTCCCACTGCTCTTGAATTTTaGGGGTTCGGCGTTTGGCGA +
Preference number: 4 (lower is better)
Translates to: HRQERNHSLCPDKRGFCPTALEF*GFGVWR
Trigger: TCGCCAAACGCCGAACCCCCAAAATTCAAGAGCAGT...GGGACAGAAGCCACGTTTGTCTGGGCACAAACTGTGATTTCTCTCTTGCCTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000025484.9
ENSMUST00000235766.3
ENSMUST00000236586.3
ENSMUST00000237358.2
ENSMUST00000237502.2
CDS-3UTR CCA 90 bp CACCACAGTGGCAGTGGACAGTGGCTACACTGTCAACAGAAGCAGTGCCAGGTGGGAGCAGCTATACTGTaGATACTGTGTGAAAGCAAT +
Preference number: 4 (lower is better)
Translates to: HHSGSGQWLHCQQKQCQVGAAIL*ILCESN
Trigger: ATTGCTTTCACACAGTATCCACAGTATAGCTGCTCC...CACCTGGCACTGCTTCTGTTGACAGTGTAGCCACTGTCCACTGCCACTGTGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000025484.9
ENSMUST00000235766.3
ENSMUST00000235947.2
ENSMUST00000236586.3
ENSMUST00000237502.2
CDS-3UTR CCA 90 bp CACAGGCAAGAGAGAAATCACAGTTTGTGCCCAGACAAACGTGGCTTCTGTCCCTTAAGCTGCTGCCTGTaGTGGAGCAGCTATACTGTG +
Preference number: 4 (lower is better)
Translates to: HRQERNHSLCPDKRGFCPLSCCL*WSSYTV
Trigger: CACAGTATAGCTGCTCCACCACAGGCAGCAGCTTAA...GGGACAGAAGCCACGTTTGTCTGGGCACAAACTGTGATTTCTCTCTTGCCTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000025484.9
ENSMUST00000235766.3
ENSMUST00000236586.3
ENSMUST00000237358.2
ENSMUST00000237502.2
CDS-3UTR CCA 90 bp CAAGGAACACAATGTTGTATGTCTGTGATGCTAACTAGCGCCCAGGAAACGGGATTGTGCTCCACTTCATaGTGGGCTTCTGGCCCACCT +
Preference number: 4 (lower is better)
Translates to: QGTQCCMSVMLTSAQETGLCSTS*WASGPP
Trigger: AGGTGGGCCAGAAGCCCACCATGAAGTGGAGCACAA...TCCCGTTTCCTGGGCGCTAGTTAGCATCACAGACATACAACATTGTGTTCCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000025484.9
ENSMUST00000235766.3
ENSMUST00000236586.3
ENSMUST00000237358.2
ENSMUST00000237502.2
CDS-3UTR CCA 90 bp AAGAGAGAAATCACAGTTTGTGCCCAGACAAACGTGGCTTCTGTCCCCATCGTCGACATCGGCAGGGAGTaGGCAGAAAACAGAATGACC +
Preference number: 4 (lower is better)
Translates to: KREITVCAQTNVASVPIVDIGRE*AENRMT
Trigger: GGTCATTCTGTTTTCTGCCCACTCCCTGCCGATGTC...GACGATGGGGACAGAAGCCACGTTTGTCTGGGCACAAACTGTGATTTCTCTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000025484.9
ENSMUST00000235766.3
ENSMUST00000235947.2
ENSMUST00000236586.3
ENSMUST00000237358.2
ENSMUST00000237502.2
CDS-3UTR CCA 90 bp CAATGTTGTATGTCTGTGATGCTAACTAGCGCCCAGGAAACGGGAGCGGGAGGCTTTTCCATGACTTTGTaGACAGTGGCTCCTACCTCT +
Preference number: 4 (lower is better)
Translates to: QCCMSVMLTSAQETGAGGFSMTL*TVAPTS
Trigger: AGAGGTAGGAGCCACTGTCCACAAAGTCATGGAAAA...GCCTCCCGCTCCCGTTTCCTGGGCGCTAGTTAGCATCACAGACATACAACATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000025484.9
ENSMUST00000235766.3
ENSMUST00000235947.2
ENSMUST00000236586.3
ENSMUST00000237358.2
ENSMUST00000237502.2
CDS-3UTR CCA 90 bp GCAGTCACCACAGTGGCAGTGGACAGTGGCTACACTGTCAACAGAAGCAGTGCCGGCCTTGGAGAACAATaGATTTCCATTAAGAGACTC +
Preference number: 4 (lower is better)
Translates to: AVTTVAVDSGYTVNRSSAGLGEQ*ISIKRL
Trigger: GAGTCTCTTAATGGAAATCCATTGTTCTCCAAGGCC...GGCACTGCTTCTGTTGACAGTGTAGCCACTGTCCACTGCCACTGTGGTGACTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000025484.9
ENSMUST00000235766.3
ENSMUST00000236586.3
3UTR CAA 72 bp CAGGAAACGGGAGCGGGAGGCACACTGGAAGCCAGTTaGGCCTACATAGGGCAAGCGAGAAATAAGATAAAA +
Preference number: 4 (lower is better)
Translates to: QETGAGGTLEAS*AYIGQARNKIK
Trigger: TTTTATCTTATTTCTCGCTTGCCCTATGTAGGCCAAACTGGCTTCCAGTGTGCCTCCCGCTCCCGTTTCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000025484.9
ENSMUST00000235215.2
ENSMUST00000235766.3
ENSMUST00000235947.2
ENSMUST00000236586.3
ENSMUST00000237358.2
ENSMUST00000237502.2
ENSMUST00000237680.2
3UTR CAA 72 bp TCCCTGCAAGTATTCCCTGAGCTTGTCCCGGGAAGATaGCTCCAGATGGGCGTTTCTTTTAAACTGAGCTGG +
Preference number: 4 (lower is better)
Translates to: SLQVFPELVPGR*LQMGVSFKLSW
Trigger: CCAGCTCAGTTTAAAAGAAACGCCCATCTGGAGCAATCTTCCCGGGACAAGCTCAGGGAATACTTGCAGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000237502.2
CDS-3UTR TCA 90 bp TTCCTGGGATGTCCCAGTAGACAGATATTCCATATTGATAAATTGACCCCAGGAGGGGCTCCCAGAGACTaGGCCACCAACCAAAGAGCA +
Preference number: 4 (lower is better)
Translates to: FLGCPSRQIFHIDKLTPGGAPRD*ATNQRA
Trigger: TGCTCTTTGGTTGGTGGCTCAGTCTCTGGGAGCCCC...TCCTGGGGTCAATTTATCAATATGGAATATCTGTCTACTGGGACATCCCAGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000237358.2
CDS-3UTR TCA 90 bp CAAGGAACACAATGTTGTATGTCTGTGATGCTAACTAGCGCCCAGGAAACGGGATTCCTCCTTTCTGGTTaGGCTTGGGGTTTGGTGGTC +
Preference number: 4 (lower is better)
Translates to: QGTQCCMSVMLTSAQETGFLLSG*AWGLVV
Trigger: GACCACCAAACCCCAAGCTCAACCAGAAAGGAGGAA...TCCCGTTTCCTGGGCGCTAGTTAGCATCACAGACATACAACATTGTGTTCCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000235766.3
ENSMUST00000236586.3
ENSMUST00000237358.2
ENSMUST00000237502.2
ENSMUST00000237680.2
CDS-3UTR GCA 90 bp TCACCACAGTGGCAGTGGACAGTGGCTACACTGTCAACAGAAGCAGTGCCAGGTTTTGGCGATGAATGGTaGCAGCTTATTTTGAATGGG +
Preference number: 4 (lower is better)
Translates to: SPQWQWTVATLSTEAVPGFGDEW*QLILNG
Trigger: CCCATTCAAAATAAGCTGGCACCATTCATCGCCAAA...ACCTGGCACTGCTTCTGTTGACAGTGTAGCCACTGTCCACTGCCACTGTGGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000025484.9
ENSMUST00000235766.3
ENSMUST00000236586.3
ENSMUST00000237502.2
CDS-3UTR GCA 90 bp CAATGTTGTATGTCTGTGATGCTAACTAGCGCCCAGGAAACGGGAGCGGGAGGCTTTGGCGATGAATGGTaGCAGCTTATTTTGAATGGG +
Preference number: 4 (lower is better)
Translates to: QCCMSVMLTSAQETGAGGFGDEW*QLILNG
Trigger: CCCATTCAAAATAAGCTGGCACCATTCATCGCCAAA...GCCTCCCGCTCCCGTTTCCTGGGCGCTAGTTAGCATCACAGACATACAACATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000025484.9
ENSMUST00000235766.3
ENSMUST00000236586.3
ENSMUST00000237358.2
ENSMUST00000237502.2
CDS-3UTR GCA 90 bp CAGTTTCCAGGGAGGGAGATGAGACTCTTGCAGTCACCACAGTGGCAGTGGACAGTGGTCACTGGTAAATaGTATTGGAACCAAGAGGAT +
Preference number: 4 (lower is better)
Translates to: QFPGREMRLLQSPQWQWTVVTGK*YWNQED
Trigger: ATCCTCTTGGTTCCAATAGCATTTACCAGTGACCAC...TGTCCACTGCCACTGTGGTGACTGCAAGAGTCTCATCTCCCTCCCTGGAAACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000025484.9
ENSMUST00000236586.3
ENSMUST00000237502.2
CDS-3UTR GCA 90 bp TGTACCACATTTTCTGTATCCATTCTTCTGTTGAGGGACATCTGGGTTCTTTCCGACTGGATGTGGGAGTaGACCAGATCAGCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: CTTFSVSILLLRDIWVLSDWMWE*TRSARA
Trigger: GGCCCTGGCTGATCTGGTGCACTCCCACATCCAGTC...GGAAAGAACCCAGATGTCCCTCAACAGAAGAATGGATACAGAAAATGTGGTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000235766.3
ENSMUST00000236586.3
CDS-3UTR GCA 90 bp AGGCAAGAGAGAAATCACAGTTTGTGCCCAGACAAACGTGGCTTCTGTCCCCATCAGTTCAGACTCAACTaGGTGGAGCACAGCTTGTTG +
Preference number: 4 (lower is better)
Translates to: RQERNHSLCPDKRGFCPHQFRLN*VEHSLL
Trigger: CAACAAGCTGTGCTCCACGCAGTTGAGTCTGAACTG...ATGGGGACAGAAGCCACGTTTGTCTGGGCACAAACTGTGATTTCTCTCTTGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000025484.9
ENSMUST00000236586.3
ENSMUST00000237358.2
CDS-3UTR CCA 90 bp TCAGTTTCCAGGGAGGGAGATGAGACTCTTGCAGTCACCACAGTGGCAGTGGACGGAGCAGCTATACTGTaGATACTGTGTGAAAGCAAT +
Preference number: 4 (lower is better)
Translates to: SVSREGDETLAVTTVAVDGAAIL*ILCESN
Trigger: ATTGCTTTCACACAGTATCCACAGTATAGCTGCTCC...GTCCACTGCCACTGTGGTGACTGCAAGAGTCTCATCTCCCTCCCTGGAAACTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000025484.9
ENSMUST00000235766.3
ENSMUST00000235947.2
ENSMUST00000236586.3
ENSMUST00000237502.2
CDS-3UTR CCA 90 bp ATTAGGCTATGCGCCCGGGGAATCTTAGCACTCTTGAAACATGCACTTGTTTCACCAGTCGGTAGGGGTTaGGGTAACCCAGCTTTTCCA +
Preference number: 4 (lower is better)
Translates to: IRLCARGILALLKHALVSPVGRG*GNPAFP
Trigger: TGGAAAAGCTGGGTTACCCCAACCCCTACCGACTGG...TGAAACAAGTGCATGTTTCAAGAGTGCTAAGATTCCCCGGGCGCATAGCCTAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000025484.9
ENSMUST00000235766.3
ENSMUST00000235947.2
ENSMUST00000236586.3
ENSMUST00000237502.2
CDS-3UTR CCA 90 bp CCCAATTCTAAGAAGGGGCAAAGTGTCCACACTTTGGTCTTCGTTCTTCTTGAGCCAGTCGGTAGGGGTTaGGGTAACCCAGCTTTTCCA +
Preference number: 4 (lower is better)
Translates to: PNSKKGQSVHTLVFVLLEPVGRG*GNPAFP
Trigger: TGGAAAAGCTGGGTTACCCCAACCCCTACCGACTGG...CTCAAGAAGAACGAAGACCAAAGTGTGGACACTTTGCCCCTTCTTAGAATTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000235766.3
ENSMUST00000236586.3
CDS-3UTR CCA 90 bp AAGAGAGAAATCACAGTTTGTGCCCAGACAAACGTGGCTTCTGTCCCCATCGTCGAGCTTGGGGTTTGGTaGTCTTGGCATGATGTACCT +
Preference number: 4 (lower is better)
Translates to: KREITVCAQTNVASVPIVELGVW*SWHDVP
Trigger: AGGTACATCATGCCAAGACCACCAAACCCCAAGCTC...GACGATGGGGACAGAAGCCACGTTTGTCTGGGCACAAACTGTGATTTCTCTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000235766.3
ENSMUST00000236586.3
ENSMUST00000237358.2
ENSMUST00000237502.2
ENSMUST00000237680.2
CDS-3UTR CCA 90 bp GGATGTGGGAGTGCACCAGATCAGCCAGGGCCTTGGAGAACAATGGATTTCCATCAATATGCCCGTTTTTaGCTTCCTCCTTTCTGGTTG +
Preference number: 4 (lower is better)
Translates to: GCGSAPDQPGPWRTMDFHQYARF*LPPFWL
Trigger: CAACCAGAAAGGAGGAAGCCAAAAACGGGCATATTG...ATGGAAATCCATTGTTCTCCAAGGCCCTGGCTGATCTGGTGCACTCCCACATCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000237680.2
CDS-3UTR TCA 90 bp ATAAAACACAGGCAAGAGAGAAATCACAGTTTGTGCCCAGACAAACGTGGCTTCTGGAAGTCCACATCTTaGTGGGGGATCCACCTCCGA +
Preference number: 4 (lower is better)
Translates to: IKHRQERNHSLCPDKRGFWKSTS*WGIHLR
Trigger: TCGGAGGTGGATCCCCCATCAAGATGTGGACTTCCA...GAAGCCACGTTTGTCTGGGCACAAACTGTGATTTCTCTCTTGCCTGTGTTTTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000025484.9
ENSMUST00000235766.3
ENSMUST00000236586.3
ENSMUST00000237358.2
ENSMUST00000237502.2
CDS-3UTR TCA 90 bp GCACTCTTGAAACATGCACTTGTTTCAGTTTCCAGGGAGGGAGATGAGACTCTTTTCCTCCTTTCTGGTTaGGCTTGGGGTTTGGTGGTC +
Preference number: 4 (lower is better)
Translates to: ALLKHALVSVSREGDETLFLLSG*AWGLVV
Trigger: GACCACCAAACCCCAAGCTCAACCAGAAAGGAGGAA...AAGAGTCTCATCTCCCTCCCTGGAAACTGAAACAAGTGCATGTTTCAAGAGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000235766.3
ENSMUST00000236586.3
ENSMUST00000237502.2
CDS-3UTR GCA 90 bp GACTCTTGCAGTCACCACAGTGGCAGTGGACAGTGGCTACACTGTCAACAGAAGATCCACCTCCGATTCTaGGATACTGCTCTTGAATTT +
Preference number: 4 (lower is better)
Translates to: DSCSHHSGSGQWLHCQQKIHLRF*DTALEF
Trigger: AAATTCAAGAGCAGTATCGCAGAATCGGAGGTGGAT...CTTCTGTTGACAGTGTAGCCACTGTCCACTGCCACTGTGGTGACTGCAAGAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000025484.9
ENSMUST00000235766.3
ENSMUST00000236586.3
ENSMUST00000237502.2
CDS-3UTR CCA 90 bp GAACACATCAAAACAATCATCCATCCTGACCAAGTAGGTTTCATTCCAGGGATGTGCTCCACTTCATGGTaGGCTTCTGGCCCACCTCGT +
Preference number: 4 (lower is better)
Translates to: EHIKTIIHPDQVGFIPGMCSTSW*ASGPPR
Trigger: ACGAGGTGGGCCAGAAGCCCACCATGAAGTGGAGCA...CATCCCTGGAATGAAACCTACTTGGTCAGGATGGATGATTGTTTTGATGTGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000235766.3
ENSMUST00000236586.3
CDS-3UTR CCA 90 bp ACAGGCAAGAGAGAAATCACAGTTTGTGCCCAGACAAACGTGGCTTCTGTCCCCAGCTCTTTCAGAATGTaGTCTGCAAAGCACTGGATG +
Preference number: 4 (lower is better)
Translates to: TGKREITVCAQTNVASVPSSFRM*SAKHWM
Trigger: CATCCAGTGCTTTGCAGACCACATTCTGAAAGAGCT...GGGGACAGAAGCCACGTTTGTCTGGGCACAAACTGTGATTTCTCTCTTGCCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000025484.9
ENSMUST00000235766.3
ENSMUST00000236586.3
ENSMUST00000237358.2
ENSMUST00000237502.2
CDS-3UTR CCA 90 bp TCGTGTTTTGTGTTTGATGCAGGTGAGCACATGATCCCAAGCTGTGCGCTCAGCAGCTCTTTCAGAATGTaGTCTGCAAAGCACTGGATG +
Preference number: 4 (lower is better)
Translates to: SCFVFDAGEHMIPSCALSSSFRM*SAKHWM
Trigger: CATCCAGTGCTTTGCAGACCACATTCTGAAAGAGCT...GCTGAGCGCACAGCTTGGGATCATGTGCTCACCTGCATCAAACACAAAACACGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000025484.9
ENSMUST00000235766.3
ENSMUST00000236586.3
ENSMUST00000237502.2
CDS-3UTR CCA 90 bp GAGTCTATCCTCCAAGGAACACAATGTTGTATGTCTGTGATGCTAACTAGCGCCGTACTGGACCAACCTTaGACTGCCAAACCAGTCGGT +
Preference number: 4 (lower is better)
Translates to: ESILQGTQCCMSVMLTSAVLDQP*TAKPVG
Trigger: ACCGACTGGTTTGGCAGTCCAAGGTTGGTCCAGTAC...GGCGCTAGTTAGCATCACAGACATACAACATTGTGTTCCTTGGAGGATAGACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000025484.9
ENSMUST00000235947.2
ENSMUST00000236586.3
ENSMUST00000237358.2
ENSMUST00000237502.2
CDS-3UTR CCA 90 bp TTCCTGGGATGTCCCAGTAGACAGATATTCCATATTGATAAATTGACCCCAGGAGCCCAACCAGGGTACTaGACCAACCTTGGACTGCCA +
Preference number: 4 (lower is better)
Translates to: FLGCPSRQIFHIDKLTPGAQPGY*TNLGLP
Trigger: TGGCAGTCCAAGGTTGGTCCAGTACCCTGGTTGGGC...TCCTGGGGTCAATTTATCAATATGGAATATCTGTCTACTGGGACATCCCAGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000025484.9
ENSMUST00000235947.2
ENSMUST00000236586.3
ENSMUST00000237358.2
ENSMUST00000237502.2
CDS-3UTR CCA 90 bp CTGGATGTGGGAGTGCACCAGATCAGCCAGGGCCTTGGAGAACAATGGATTTCCGGACACATAAGTGAGTaGATTTTATTCCACCTTCGA +
Preference number: 4 (lower is better)
Translates to: LDVGVHQISQGLGEQWISGHISE*ILFHLR
Trigger: TCGAAGGTGGAATAAAATCCACTCACTTATGTGTCC...GGAAATCCATTGTTCTCCAAGGCCCTGGCTGATCTGGTGCACTCCCACATCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000237680.2
3UTR CAA 72 bp CATCAATATGCCCGTTTTTGGCTTCCTCCTTTCTGGTaGAGCTTGGGGTTTGGTGGTCTTGGCATGATGTAC +
Preference number: 4 (lower is better)
Translates to: HQYARFWLPPFW*SLGFGGLGMMY
Trigger: GTACATCATGCCAAGACCACCAAACCCCAAGCTCAACCAGAAAGGAGGAAGCCAAAAACGGGCATATTGATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000238149.2
CDS-3UTR TCA 90 bp GCACTCTTGAAACATGCACTTGTTTCAGTTTCCAGGGAGGGAGATGAGACTCTTAACCCAGCTTTTCCATaGCTTTGTGGACAGTGGCTC +
Preference number: 4 (lower is better)
Translates to: ALLKHALVSVSREGDETLNPAFP*LCGQWL
Trigger: GAGCCACTGTCCACAAAGTCATGGAAAAGCTGGGTT...AAGAGTCTCATCTCCCTCCCTGGAAACTGAAACAAGTGCATGTTTCAAGAGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000025484.9
ENSMUST00000235766.3
ENSMUST00000235947.2
ENSMUST00000236586.3
ENSMUST00000237502.2
CDS-3UTR TCA 90 bp TCTATCCTCCAAGGAACACAATGTTGTATGTCTGTGATGCTAACTAGCGCCCAGAACCCAGCTTTTCCATaGCTTTGTGGACAGTGGCTC +
Preference number: 4 (lower is better)
Translates to: SILQGTQCCMSVMLTSAQNPAFP*LCGQWL
Trigger: GAGCCACTGTCCACAAAGTCATGGAAAAGCTGGGTT...CTGGGCGCTAGTTAGCATCACAGACATACAACATTGTGTTCCTTGGAGGATAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000025484.9
ENSMUST00000235766.3
ENSMUST00000235947.2
ENSMUST00000236586.3
ENSMUST00000237358.2
ENSMUST00000237502.2
CDS-3UTR TCA 90 bp GAGTCTATCCTCCAAGGAACACAATGTTGTATGTCTGTGATGCTAACTAGCGCCAACCCAGCTTTTCCATaGCTTTGTGGACAGTGGCTC +
Preference number: 4 (lower is better)
Translates to: ESILQGTQCCMSVMLTSANPAFP*LCGQWL
Trigger: GAGCCACTGTCCACAAAGTCATGGAAAAGCTGGGTT...GGCGCTAGTTAGCATCACAGACATACAACATTGTGTTCCTTGGAGGATAGACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000025484.9
ENSMUST00000235766.3
ENSMUST00000235947.2
ENSMUST00000236586.3
ENSMUST00000237358.2
ENSMUST00000237502.2
CDS-3UTR GCA 90 bp CAGGCAAGAGAGAAATCACAGTTTGTGCCCAGACAAACGTGGCTTCTGTCCCCATTTGGCGATGAATGGTaGCAGCTTATTTTGAATGGG +
Preference number: 4 (lower is better)
Translates to: QAREKSQFVPRQTWLLSPFGDEW*QLILNG
Trigger: CCCATTCAAAATAAGCTGGCACCATTCATCGCCAAA...TGGGGACAGAAGCCACGTTTGTCTGGGCACAAACTGTGATTTCTCTCTTGCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000025484.9
ENSMUST00000235766.3
ENSMUST00000236586.3
ENSMUST00000237358.2
ENSMUST00000237502.2
CDS-3UTR GCA 90 bp ATTAGGCTATGCGCCCGGGGAATCTTAGCACTCTTGAAACATGCACTTGTTTCAAAATGGCATTTAAGCTaGTGCCTGTGGTGGAGCAGC +
Preference number: 4 (lower is better)
Translates to: IRLCARGILALLKHALVSKWHLS*CLWWSS
Trigger: GCTGCTCCACCACAGGCAGCAGCTTAAATGCCATTT...TGAAACAAGTGCATGTTTCAAGAGTGCTAAGATTCCCCGGGCGCATAGCCTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000025484.9
ENSMUST00000235766.3
ENSMUST00000236586.3
ENSMUST00000237502.2
CDS-3UTR CCA 90 bp GAGTCTATCCTCCAAGGAACACAATGTTGTATGTCTGTGATGCTAACTAGCGCCACTGCTCTTGAATTTTaGGGGTTCGGCGTTTGGCGA +
Preference number: 4 (lower is better)
Translates to: ESILQGTQCCMSVMLTSATALEF*GFGVWR
Trigger: TCGCCAAACGCCGAACCCCCAAAATTCAAGAGCAGT...GGCGCTAGTTAGCATCACAGACATACAACATTGTGTTCCTTGGAGGATAGACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000025484.9
ENSMUST00000235766.3
ENSMUST00000236586.3
ENSMUST00000237358.2
ENSMUST00000237502.2
CDS-3UTR CCA 90 bp TCGTGTTTTGTGTTTGATGCAGGTGAGCACATGATCCCAAGCTGTGCGCTCAGCGGAGCAGCTATACTGTaGATACTGTGTGAAAGCAAT +
Preference number: 4 (lower is better)
Translates to: SCFVFDAGEHMIPSCALSGAAIL*ILCESN
Trigger: ATTGCTTTCACACAGTATCCACAGTATAGCTGCTCC...GCTGAGCGCACAGCTTGGGATCATGTGCTCACCTGCATCAAACACAAAACACGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000025484.9
ENSMUST00000235766.3
ENSMUST00000235947.2
ENSMUST00000236586.3
ENSMUST00000237502.2
CDS-3UTR CCA 90 bp AGGCAAGAGAGAAATCACAGTTTGTGCCCAGACAAACGTGGCTTCTGTCCCCATAGCTCTTTCAGAATGTaGTCTGCAAAGCACTGGATG +
Preference number: 4 (lower is better)
Translates to: RQERNHSLCPDKRGFCPHSSFRM*SAKHWM
Trigger: CATCCAGTGCTTTGCAGACCACATTCTGAAAGAGCT...ATGGGGACAGAAGCCACGTTTGTCTGGGCACAAACTGTGATTTCTCTCTTGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000025484.9
ENSMUST00000235766.3
ENSMUST00000236586.3
ENSMUST00000237358.2
ENSMUST00000237502.2
CDS-3UTR CCA 90 bp GATGTTCTCAGCTCCACACTTCTGAGCCAACACTTGAGAGTATTCAATATCCAGGTACTGGACCAACCTTaGACTGCCAAACCAGTCGGT +
Preference number: 4 (lower is better)
Translates to: DVLSSTLLSQHLRVFNIQVLDQP*TAKPVG
Trigger: ACCGACTGGTTTGGCAGTCCAAGGTTGGTCCAGTAC...CTGGATATTGAATACTCTCAAGTGTTGGCTCAGAAGTGTGGAGCTGAGAACATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235947.2
CDS-3UTR CCA 90 bp ATAAAACACAGGCAAGAGAGAAATCACAGTTTGTGCCCAGACAAACGTGGCTTCGTACTGGACCAACCTTaGACTGCCAAACCAGTCGGT +
Preference number: 4 (lower is better)
Translates to: IKHRQERNHSLCPDKRGFVLDQP*TAKPVG
Trigger: ACCGACTGGTTTGGCAGTCCAAGGTTGGTCCAGTAC...GAAGCCACGTTTGTCTGGGCACAAACTGTGATTTCTCTCTTGCCTGTGTTTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000025484.9
ENSMUST00000235947.2
ENSMUST00000236586.3
ENSMUST00000237358.2
ENSMUST00000237502.2
CDS-3UTR CCA 90 bp CAGGCAAGAGAGAAATCACAGTTTGTGCCCAGACAAACGTGGCTTCTGTCCCCAGGCCTTGGAGAACAATaGATTTCCATTAAGAGACTC +
Preference number: 4 (lower is better)
Translates to: QAREKSQFVPRQTWLLSPGLGEQ*ISIKRL
Trigger: GAGTCTCTTAATGGAAATCCATTGTTCTCCAAGGCC...TGGGGACAGAAGCCACGTTTGTCTGGGCACAAACTGTGATTTCTCTCTTGCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000025484.9
ENSMUST00000235766.3
ENSMUST00000236586.3
ENSMUST00000237358.2
CDS-3UTR CCA 90 bp AACACAGGCAAGAGAGAAATCACAGTTTGTGCCCAGACAAACGTGGCTTCTGTCGATCAGCCAGGGCCTTaGAGAACAATGGATTTCCAT +
Preference number: 4 (lower is better)
Translates to: NTGKREITVCAQTNVASVDQPGP*RTMDFH
Trigger: ATGGAAATCCATTGTTCTCCAAGGCCCTGGCTGATC...GACAGAAGCCACGTTTGTCTGGGCACAAACTGTGATTTCTCTCTTGCCTGTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000025484.9
ENSMUST00000235766.3
ENSMUST00000236586.3
ENSMUST00000237358.2
CDS-3UTR CCA 90 bp GAGTCTATCCTCCAAGGAACACAATGTTGTATGTCTGTGATGCTAACTAGCGCCGAGCTTGGGGTTTGGTaGTCTTGGCATGATGTACCT +
Preference number: 4 (lower is better)
Translates to: ESILQGTQCCMSVMLTSAELGVW*SWHDVP
Trigger: AGGTACATCATGCCAAGACCACCAAACCCCAAGCTC...GGCGCTAGTTAGCATCACAGACATACAACATTGTGTTCCTTGGAGGATAGACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000235766.3
ENSMUST00000236586.3
ENSMUST00000237358.2
ENSMUST00000237502.2
ENSMUST00000237680.2
CDS-3UTR CCA 90 bp GAGTCTATCCTCCAAGGAACACAATGTTGTATGTCTGTGATGCTAACTAGCGCCGTCTGCAAAGCACTGTaGTGGAGCAGCTATACTGTG +
Preference number: 4 (lower is better)
Translates to: ESILQGTQCCMSVMLTSAVCKAL*WSSYTV
Trigger: CACAGTATAGCTGCTCCACCACAGTGCTTTGCAGAC...GGCGCTAGTTAGCATCACAGACATACAACATTGTGTTCCTTGGAGGATAGACTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235947.2
CDS-3UTR TCA 90 bp GGATGTCCCAGTAGACAGATATTCCATATTGATAAATTGACCCCAGGATCAGTCGAATGGGAAGTGTCATaGGGTCTCGGTCCAGGAAGA +
Preference number: 4 (lower is better)
Translates to: GCPSRQIFHIDKLTPGSVEWEVS*GLGPGR
Trigger: TCTTCCTGGACCGAGACCTCATGACACTTCCCATTC...GACTGATCCTGGGGTCAATTTATCAATATGGAATATCTGTCTACTGGGACATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000025484.9
ENSMUST00000235215.2
ENSMUST00000235766.3
ENSMUST00000236586.3
ENSMUST00000237358.2
ENSMUST00000237502.2
ENSMUST00000237680.2
CDS-3UTR TCA 90 bp CAACACTTGAGAGTATTCAATATCCAGTTCGTAGAGCGTCTCAATGTGGTCACTGAATGGGAAGTGTCATaGGGTCTCGGTCCAGGAAGA +
Preference number: 4 (lower is better)
Translates to: QHLRVFNIQFVERLNVVTEWEVS*GLGPGR
Trigger: TCTTCCTGGACCGAGACCTCATGACACTTCCCATTC...AGTGACCACATTGAGACGCTCTACGAACTGGATATTGAATACTCTCAAGTGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000235215.2
ENSMUST00000237680.2
CDS-3UTR TCA 90 bp GGATGTCCCAGTAGACAGATATTCCATATTGATAAATTGACCCCAGGATCAGTCCTGCGATACTGCTCTTaGATTTTGGGGGTTCGGCGT +
Preference number: 4 (lower is better)
Translates to: GCPSRQIFHIDKLTPGSVLRYCS*ILGVRR
Trigger: ACGCCGAACCCCCAAAATTCAAGAGCAGTATCGCAG...GACTGATCCTGGGGTCAATTTATCAATATGGAATATCTGTCTACTGGGACATCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000025484.9
ENSMUST00000235766.3
ENSMUST00000236586.3
ENSMUST00000237358.2
ENSMUST00000237502.2
CDS-3UTR TCA 90 bp TATTCTACCGCTTCAAGAGGAAGAGAGGGAAATCTATTTTCAAGATCATCTGAAAGGGGTCCCCTCTGTTaGCAACAGACATCGGCAGGG +
Preference number: 4 (lower is better)
Translates to: YSTASRGREGNLFSRSSERGPLC*QQTSAG
Trigger: CCCTGCCGATGTCTGTTGTCAACAGAGGGGACCCCT...TTCAGATGATCTTGAAAATAGATTTCCCTCTCTTCCTCTTGAAGCGGTAGAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000235766.3
ENSMUST00000236586.3
CDS-3UTR TCA 90 bp GGATGTCCCAGTAGACAGATATTCCATATTGATAAATTGACCCCAGGATCAGTCTTCCTCCTTTCTGGTTaGGCTTGGGGTTTGGTGGTC +
Preference number: 4 (lower is better)
Translates to: GCPSRQIFHIDKLTPGSVFLLSG*AWGLVV
Trigger: GACCACCAAACCCCAAGCTCAACCAGAAAGGAGGAA...GACTGATCCTGGGGTCAATTTATCAATATGGAATATCTGTCTACTGGGACATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000235766.3
ENSMUST00000236586.3
ENSMUST00000237358.2
ENSMUST00000237502.2
ENSMUST00000237680.2
CDS-3UTR CCA 90 bp ATAAAACACAGGCAAGAGAGAAATCACAGTTTGTGCCCAGACAAACGTGGCTTCACTGCTCTTGAATTTTaGGGGTTCGGCGTTTGGCGA +
Preference number: 4 (lower is better)
Translates to: IKHRQERNHSLCPDKRGFTALEF*GFGVWR
Trigger: TCGCCAAACGCCGAACCCCCAAAATTCAAGAGCAGT...GAAGCCACGTTTGTCTGGGCACAAACTGTGATTTCTCTCTTGCCTGTGTTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000025484.9
ENSMUST00000235766.3
ENSMUST00000236586.3
ENSMUST00000237358.2
ENSMUST00000237502.2
CDS-3UTR CCA 90 bp GTACCATCGTGTTTTGTGTTTGATGCAGGTGAGCACATGATCCCAAGCTGTGCGGGAGCAGCTATACTGTaGATACTGTGTGAAAGCAAT +
Preference number: 4 (lower is better)
Translates to: VPSCFVFDAGEHMIPSCAGAAIL*ILCESN
Trigger: ATTGCTTTCACACAGTATCCACAGTATAGCTGCTCC...CGCACAGCTTGGGATCATGTGCTCACCTGCATCAAACACAAAACACGATGGTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000025484.9
ENSMUST00000235766.3
ENSMUST00000235947.2
ENSMUST00000236586.3
ENSMUST00000237502.2
CDS-3UTR CCA 90 bp ATTCTAAGAAGGGGCAAAGTGTCCACACTTTGGTCTTCGTTCTTCTTGAGTTTCGTACTGGACCAACCTTaGACTGCCAAACCAGTCGGT +
Preference number: 4 (lower is better)
Translates to: ILRRGKVSTLWSSFFLSFVLDQP*TAKPVG
Trigger: ACCGACTGGTTTGGCAGTCCAAGGTTGGTCCAGTAC...GAAACTCAAGAAGAACGAAGACCAAAGTGTGGACACTTTGCCCCTTCTTAGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000236586.3
CDS-3UTR CCA 90 bp GCACTCTTGAAACATGCACTTGTTTCAGTTTCCAGGGAGGGAGATGAGACTCTTGATCAGCCAGGGCCTTaGAGAACAATGGATTTCCAT +
Preference number: 4 (lower is better)
Translates to: ALLKHALVSVSREGDETLDQPGP*RTMDFH
Trigger: ATGGAAATCCATTGTTCTCCAAGGCCCTGGCTGATC...AAGAGTCTCATCTCCCTCCCTGGAAACTGAAACAAGTGCATGTTTCAAGAGTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000025484.9
ENSMUST00000235766.3
ENSMUST00000236586.3
3UTR CAA 72 bp TTTATTAGGCTATGCGCCCGGGGAATCTTAGCACTCTaGAAACATGCACTTGTTTCAGTTTCCAGGGAGGGA +
Preference number: 4 (lower is better)
Translates to: FIRLCARGILAL*KHALVSVSREG
Trigger: TCCCTCCCTGGAAACTGAAACAAGTGCATGTTTCAAGAGTGCTAAGATTCCCCGGGCGCATAGCCTAATAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000025484.9
ENSMUST00000235215.2
ENSMUST00000235766.3
ENSMUST00000235947.2
ENSMUST00000236586.3
ENSMUST00000237502.2
3UTR CAA 72 bp ACACTACCCTGGTATGTCACCCTCACCTATCTGTGGTaGGCAGTCAAAGGAATCGCATCTTTAGGAGTTGAA +
Preference number: 4 (lower is better)
Translates to: TLPWYVTLTYLW*AVKGIASLGVE
Trigger: TTCAACTCCTAAAGATGCGATTCCTTTGACTGCCAACCACAGATAGGTGAGGGTGACATACCAGGGTAGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000235766.3
ENSMUST00000236586.3
CDS-3UTR TCA 90 bp AAGATAAAACACAGGCAAGAGAGAAATCACAGTTTGTGCCCAGACAAACGTGGCACTGTGGATACTGTGTaGAAGCAATGGCCCTCTCTA +
Preference number: 4 (lower is better)
Translates to: KIKHRQERNHSLCPDKRGTVDTV*KQWPSL
Trigger: TAGAGAGGGCCATTGCTTTCACACAGTATCCACAGT...GCCACGTTTGTCTGGGCACAAACTGTGATTTCTCTCTTGCCTGTGTTTTATCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000025484.9
ENSMUST00000235766.3
ENSMUST00000235947.2
ENSMUST00000236586.3
ENSMUST00000237358.2
ENSMUST00000237502.2
CDS-3UTR TCA 90 bp ATAAAACACAGGCAAGAGAGAAATCACAGTTTGTGCCCAGACAAACGTGGCTTCACTGTGGATACTGTGTaGAAGCAATGGCCCTCTCTA +
Preference number: 4 (lower is better)
Translates to: IKHRQERNHSLCPDKRGFTVDTV*KQWPSL
Trigger: TAGAGAGGGCCATTGCTTTCACACAGTATCCACAGT...GAAGCCACGTTTGTCTGGGCACAAACTGTGATTTCTCTCTTGCCTGTGTTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000025484.9
ENSMUST00000235766.3
ENSMUST00000235947.2
ENSMUST00000236586.3
ENSMUST00000237358.2
ENSMUST00000237502.2
CDS-3UTR GCA 90 bp GTACACAGAGCAGCTCGAGACAGCACTGGCAGTTCACTGCTAATTACAATGACAATCCACCTCCGATTCTaGGATACTGCTCTTGAATTT +
Preference number: 4 (lower is better)
Translates to: VHRAARDSTGSSLLITMTIHLRF*DTALEF
Trigger: AAATTCAAGAGCAGTATCGCAGAATCGGAGGTGGAT...TGTCATTGTAATTAGCAGTGAACTGCCAGTGCTGTCTCGAGCTGCTCTGTGTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000235766.3
ENSMUST00000236586.3
CDS-3UTR GCA 90 bp GGATGTCCCAGTAGACAGATATTCCATATTGATAAATTGACCCCAGGATCAGTCAAATGGCATTTAAGCTaGTGCCTGTGGTGGAGCAGC +
Preference number: 4 (lower is better)
Translates to: GCPSRQIFHIDKLTPGSVKWHLS*CLWWSS
Trigger: GCTGCTCCACCACAGGCAGCAGCTTAAATGCCATTT...GACTGATCCTGGGGTCAATTTATCAATATGGAATATCTGTCTACTGGGACATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000025484.9
ENSMUST00000235766.3
ENSMUST00000236586.3
ENSMUST00000237358.2
ENSMUST00000237502.2
CDS-3UTR CCA 90 bp GAGTCTATCCTCCAAGGAACACAATGTTGTATGTCTGTGATGCTAACTAGCGCCAGCTCTTTCAGAATGTaGTCTGCAAAGCACTGGATG +
Preference number: 4 (lower is better)
Translates to: ESILQGTQCCMSVMLTSASSFRM*SAKHWM
Trigger: CATCCAGTGCTTTGCAGACCACATTCTGAAAGAGCT...GGCGCTAGTTAGCATCACAGACATACAACATTGTGTTCCTTGGAGGATAGACTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000025484.9
ENSMUST00000235766.3
ENSMUST00000236586.3
ENSMUST00000237358.2
ENSMUST00000237502.2
CDS-3UTR CCA 90 bp AAGATAAAACACAGGCAAGAGAGAAATCACAGTTTGTGCCCAGACAAACGTGGCGATCAGCCAGGGCCTTaGAGAACAATGGATTTCCAT +
Preference number: 4 (lower is better)
Translates to: KIKHRQERNHSLCPDKRGDQPGP*RTMDFH
Trigger: ATGGAAATCCATTGTTCTCCAAGGCCCTGGCTGATC...GCCACGTTTGTCTGGGCACAAACTGTGATTTCTCTCTTGCCTGTGTTTTATCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000025484.9
ENSMUST00000235766.3
ENSMUST00000236586.3
ENSMUST00000237358.2
CDS-3UTR CCA 90 bp CCCAATTCTAAGAAGGGGCAAAGTGTCCACACTTTGGTCTTCGTTCTTCTTGAGCAATATGCCCGTTTTTaGCTTCCTCCTTTCTGGTTG +
Preference number: 4 (lower is better)
Translates to: PNSKKGQSVHTLVFVLLEQYARF*LPPFWL
Trigger: CAACCAGAAAGGAGGAAGCCAAAAACGGGCATATTG...CTCAAGAAGAACGAAGACCAAAGTGTGGACACTTTGCCCCTTCTTAGAATTGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000235766.3
ENSMUST00000236586.3
CDS-3UTR CCA 90 bp ATTAGGCTATGCGCCCGGGGAATCTTAGCACTCTTGAAACATGCACTTGTTTCACAATATGCCCGTTTTTaGCTTCCTCCTTTCTGGTTG +
Preference number: 4 (lower is better)
Translates to: IRLCARGILALLKHALVSQYARF*LPPFWL
Trigger: CAACCAGAAAGGAGGAAGCCAAAAACGGGCATATTG...TGAAACAAGTGCATGTTTCAAGAGTGCTAAGATTCCCCGGGCGCATAGCCTAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000235766.3
ENSMUST00000236586.3
ENSMUST00000237502.2
3UTR CAA 72 bp TCTGATGTTCTCAGCTCCACACTTCTGAGCCAACACTaGAGAGTATTCAATATCCAGTTCGTAGAGCGTCTC +
Preference number: 4 (lower is better)
Translates to: SDVLSSTLLSQH*RVFNIQFVERL
Trigger: GAGACGCTCTACGAACTGGATATTGAATACTCTCAAGTGTTGGCTCAGAAGTGTGGAGCTGAGAACATCAGA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000235215.2
ENSMUST00000235947.2
ENSMUST00000237680.2
3UTR CAA 72 bp CCAAACTTTGTCTCTGTAACTCCGTCCATGGGTGTTTaGTTCCCAATTCTAAGAAGGGGCAAAGTGTCCACA +
Preference number: 4 (lower is better)
Translates to: PNFVSVTPSMGV*FPILRRGKVST
Trigger: TGTGGACACTTTGCCCCTTCTTAGAATTGGGAACAAAACACCCATGGACGGAGTTACAGAGACAAAGTTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000235766.3
ENSMUST00000236586.3
CDS-3UTR TCA 90 bp TATTCTACCGCTTCAAGAGGAAGAGAGGGAAATCTATTTTCAAGATCATCTGAATGGAAGTCCACATCTTaGTGGGGGATCCACCTCCGA +
Preference number: 4 (lower is better)
Translates to: YSTASRGREGNLFSRSSEWKSTS*WGIHLR
Trigger: TCGGAGGTGGATCCCCCATCAAGATGTGGACTTCCA...TTCAGATGATCTTGAAAATAGATTTCCCTCTCTTCCTCTTGAAGCGGTAGAATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000235766.3
ENSMUST00000236586.3
CDS-3UTR GCA 90 bp TCTATCCTCCAAGGAACACAATGTTGTATGTCTGTGATGCTAACTAGCGCCCAGATCCACCTCCGATTCTaGGATACTGCTCTTGAATTT +
Preference number: 4 (lower is better)
Translates to: SILQGTQCCMSVMLTSAQIHLRF*DTALEF
Trigger: AAATTCAAGAGCAGTATCGCAGAATCGGAGGTGGAT...CTGGGCGCTAGTTAGCATCACAGACATACAACATTGTGTTCCTTGGAGGATAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000025484.9
ENSMUST00000235766.3
ENSMUST00000236586.3
ENSMUST00000237358.2
ENSMUST00000237502.2
CDS-3UTR GCA 90 bp GAGTCTATCCTCCAAGGAACACAATGTTGTATGTCTGTGATGCTAACTAGCGCCGTGGTCACTGGTAAATaGTATTGGAACCAAGAGGAT +
Preference number: 4 (lower is better)
Translates to: ESILQGTQCCMSVMLTSAVVTGK*YWNQED
Trigger: ATCCTCTTGGTTCCAATAGCATTTACCAGTGACCAC...GGCGCTAGTTAGCATCACAGACATACAACATTGTGTTCCTTGGAGGATAGACTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000025484.9
ENSMUST00000236586.3
ENSMUST00000237358.2
ENSMUST00000237502.2
CDS-3UTR CCA 90 bp AACTGTGAAACTCATTCCTGGGATGTCCCAGTAGACAGATATTCCATATTGATAAGCTGCTGCCTGTGGTaGAGCAGCTATACTGTGGAT +
Preference number: 4 (lower is better)
Translates to: NCETHSWDVPVDRYSILISCCLW*SSYTVD
Trigger: ATCCACAGTATAGCTGCTCCACCACAGGCAGCAGCT...TATCAATATGGAATATCTGTCTACTGGGACATCCCAGGAATGAGTTTCACAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000025484.9
ENSMUST00000235766.3
ENSMUST00000236586.3
ENSMUST00000237502.2
CDS-3UTR CCA 90 bp GATGTTCTCAGCTCCACACTTCTGAGCCAACACTTGAGAGTATTCAATATCCAGTTTTCCATGACTTTGTaGACAGTGGCTCCTACCTCT +
Preference number: 4 (lower is better)
Translates to: DVLSSTLLSQHLRVFNIQFSMTL*TVAPTS
Trigger: AGAGGTAGGAGCCACTGTCCACAAAGTCATGGAAAA...CTGGATATTGAATACTCTCAAGTGTTGGCTCAGAAGTGTGGAGCTGAGAACATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235947.2
CDS-3UTR CCA 90 bp CTGAGCCAACACTTGAGAGTATTCAATATCCAGTTCGTAGAGCGTCTCAATGTGAGCTCTTTCAGAATGTaGTCTGCAAAGCACTGTGGT +
Preference number: 4 (lower is better)
Translates to: LSQHLRVFNIQFVERLNVSSFRM*SAKHCG
Trigger: ACCACAGTGCTTTGCAGACCACATTCTGAAAGAGCT...CACATTGAGACGCTCTACGAACTGGATATTGAATACTCTCAAGTGTTGGCTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235947.2
3UTR CAA 72 bp AATAAGATAAAACACAGGCAAGAGAGAAATCACAGTTaGTGCCCAGACAAACGTGGCTTCTGTCCCCATCGT +
Preference number: 4 (lower is better)
Translates to: NKIKHRQERNHS*CPDKRGFCPHR
Trigger: ACGATGGGGACAGAAGCCACGTTTGTCTGGGCACAAACTGTGATTTCTCTCTTGCCTGTGTTTTATCTTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000025484.9
ENSMUST00000235215.2
ENSMUST00000235766.3
ENSMUST00000235947.2
ENSMUST00000236586.3
ENSMUST00000237358.2
ENSMUST00000237502.2
ENSMUST00000237680.2
CDS-3UTR GCA 90 bp ATAAAACACAGGCAAGAGAGAAATCACAGTTTGTGCCCAGACAAACGTGGCTTCATCCACCTCCGATTCTaGGATACTGCTCTTGAATTT +
Preference number: 4 (lower is better)
Translates to: IKHRQERNHSLCPDKRGFIHLRF*DTALEF
Trigger: AAATTCAAGAGCAGTATCGCAGAATCGGAGGTGGAT...GAAGCCACGTTTGTCTGGGCACAAACTGTGATTTCTCTCTTGCCTGTGTTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000025484.9
ENSMUST00000235766.3
ENSMUST00000236586.3
ENSMUST00000237358.2
ENSMUST00000237502.2
CDS-3UTR GCA 90 bp AAGAATTTCGAGTCTATCCTCCAAGGAACACAATGTTGTATGTCTGTGATGCTACAGTTCAGACTCAACTaGGTGGAGCACAGCTTGTTG +
Preference number: 4 (lower is better)
Translates to: KNFESILQGTQCCMSVMLQFRLN*VEHSLL
Trigger: CAACAAGCTGTGCTCCACGCAGTTGAGTCTGAACTG...TAGCATCACAGACATACAACATTGTGTTCCTTGGAGGATAGACTCGAAATTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000025484.9
ENSMUST00000236586.3
ENSMUST00000237358.2
CDS-3UTR CCA 90 bp TTCCTGGGATGTCCCAGTAGACAGATATTCCATATTGATAAATTGACCCCAGGAAGCTCTTTCAGAATGTaGTCTGCAAAGCACTGGATG +
Preference number: 4 (lower is better)
Translates to: FLGCPSRQIFHIDKLTPGSSFRM*SAKHWM
Trigger: CATCCAGTGCTTTGCAGACCACATTCTGAAAGAGCT...TCCTGGGGTCAATTTATCAATATGGAATATCTGTCTACTGGGACATCCCAGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000025484.9
ENSMUST00000235766.3
ENSMUST00000236586.3
ENSMUST00000237358.2
ENSMUST00000237502.2
CDS-3UTR CCA 90 bp GTAATTCCAGTTCTTCACAAACCATTCCACAAAATAGAAGCAGAAGGTACTCTAGACATCGGCAGGGAGTaGGCAGAAAACAGAATGACC +
Preference number: 4 (lower is better)
Translates to: VIPVLHKPFHKIEAEGTLDIGRE*AENRMT
Trigger: GGTCATTCTGTTTTCTGCCCACTCCCTGCCGATGTC...TAGAGTACCTTCTGCTTCTATTTTGTGGAATGGTTTGTGAAGAACTGGAATTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000235766.3
ENSMUST00000236586.3
CDS-3UTR CCA 90 bp GGATGTCCCAGTAGACAGATATTCCATATTGATAAATTGACCCCAGGATCAGTCCAATATGCCCGTTTTTaGCTTCCTCCTTTCTGGTTG +
Preference number: 4 (lower is better)
Translates to: GCPSRQIFHIDKLTPGSVQYARF*LPPFWL
Trigger: CAACCAGAAAGGAGGAAGCCAAAAACGGGCATATTG...GACTGATCCTGGGGTCAATTTATCAATATGGAATATCTGTCTACTGGGACATCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000235766.3
ENSMUST00000236586.3
ENSMUST00000237358.2
ENSMUST00000237502.2
ENSMUST00000237680.2
3UTR CAA 72 bp GTTCCCAATTCTAAGAAGGGGCAAAGTGTCCACACTTaGGTCTTCGTTCTTCTTGAGTTTCATGTGTTTAGC +
Preference number: 4 (lower is better)
Translates to: VPNSKKGQSVHT*VFVLLEFHVFS
Trigger: GCTAAACACATGAAACTCAAGAAGAACGAAGACCAAAGTGTGGACACTTTGCCCCTTCTTAGAATTGGGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000235766.3
ENSMUST00000236586.3
CDS-3UTR TCA 90 bp AGTTCACTGCTAATTACAATGACAAACATTTGTACTTCACAGCTGACAGACAGGACTGTGGATACTGTGTaGAAGCAATGGCCCTCTCTA +
Preference number: 4 (lower is better)
Translates to: SSLLITMTNICTSQLTDRTVDTV*KQWPSL
Trigger: TAGAGAGGGCCATTGCTTTCACACAGTATCCACAGT...CCTGTCTGTCAGCTGTGAAGTACAAATGTTTGTCATTGTAATTAGCAGTGAACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000235766.3
ENSMUST00000236586.3
CDS-3UTR TCA 90 bp AACTGTGAAACTCATTCCTGGGATGTCCCAGTAGACAGATATTCCATATTGATAACTGTGGATACTGTGTaGAAGCAATGGCCCTCTCTA +
Preference number: 4 (lower is better)
Translates to: NCETHSWDVPVDRYSILITVDTV*KQWPSL
Trigger: TAGAGAGGGCCATTGCTTTCACACAGTATCCACAGT...TATCAATATGGAATATCTGTCTACTGGGACATCCCAGGAATGAGTTTCACAGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000025484.9
ENSMUST00000235766.3
ENSMUST00000235947.2
ENSMUST00000236586.3
ENSMUST00000237502.2
CDS-3UTR TCA 90 bp GTAGAGCGTCTCAATGTGGTCACTGGTAAATGCTATTGGAACCAAGAGGATGTTCAAGTACATTTCTTTTaGATGGGAAGTGTCATGAGG +
Preference number: 4 (lower is better)
Translates to: VERLNVVTGKCYWNQEDVQVHFF*MGSVMR
Trigger: CCTCATGACACTTCCCATTCAAAAGAAATGTACTTG...AACATCCTCTTGGTTCCAATAGCATTTACCAGTGACCACATTGAGACGCTCTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000237680.2
CDS-3UTR GCA 90 bp TTCCTGGGATGTCCCAGTAGACAGATATTCCATATTGATAAATTGACCCCAGGAATCCACCTCCGATTCTaGGATACTGCTCTTGAATTT +
Preference number: 4 (lower is better)
Translates to: FLGCPSRQIFHIDKLTPGIHLRF*DTALEF
Trigger: AAATTCAAGAGCAGTATCGCAGAATCGGAGGTGGAT...TCCTGGGGTCAATTTATCAATATGGAATATCTGTCTACTGGGACATCCCAGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000025484.9
ENSMUST00000235766.3
ENSMUST00000236586.3
ENSMUST00000237358.2
ENSMUST00000237502.2
CDS-3UTR CCA 90 bp TCTATCCTCCAAGGAACACAATGTTGTATGTCTGTGATGCTAACTAGCGCCCAGTACCTTGGAGAACAATaGATTTCCATTAAGAGACTC +
Preference number: 4 (lower is better)
Translates to: SILQGTQCCMSVMLTSAQYLGEQ*ISIKRL
Trigger: GAGTCTCTTAATGGAAATCCATTGTTCTCCAAGGTA...CTGGGCGCTAGTTAGCATCACAGACATACAACATTGTGTTCCTTGGAGGATAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237502.2
CDS-3UTR CCA 90 bp TTCCTGGGATGTCCCAGTAGACAGATATTCCATATTGATAAATTGACCCCAGGAAACACTGCGGTACCTTaGAGAACAATGGATTTCCAT +
Preference number: 4 (lower is better)
Translates to: FLGCPSRQIFHIDKLTPGNTAVP*RTMDFH
Trigger: ATGGAAATCCATTGTTCTCCAAGGTACCGCAGTGTT...TCCTGGGGTCAATTTATCAATATGGAATATCTGTCTACTGGGACATCCCAGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000237502.2
CDS-3UTR GCA 90 bp AATTTCGAGTCTATCCTCCAAGGAACACAATGTTGTATGTCTGTGATGCTAACTTTTGGCGATGAATGGTaGCAGCTTATTTTGAATGGG +
Preference number: 4 (lower is better)
Translates to: NFESILQGTQCCMSVMLTFGDEW*QLILNG
Trigger: CCCATTCAAAATAAGCTGGCACCATTCATCGCCAAA...AGTTAGCATCACAGACATACAACATTGTGTTCCTTGGAGGATAGACTCGAAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000025484.9
ENSMUST00000235766.3
ENSMUST00000236586.3
ENSMUST00000237358.2
ENSMUST00000237502.2
CDS-3UTR CCA 90 bp AAGAATTTCGAGTCTATCCTCCAAGGAACACAATGTTGTATGTCTGTGATGCTAGGAGCAGCTATACTGTaGATACTGTGTGAAAGCAAT +
Preference number: 4 (lower is better)
Translates to: KNFESILQGTQCCMSVMLGAAIL*ILCESN
Trigger: ATTGCTTTCACACAGTATCCACAGTATAGCTGCTCC...TAGCATCACAGACATACAACATTGTGTTCCTTGGAGGATAGACTCGAAATTCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000025484.9
ENSMUST00000235766.3
ENSMUST00000235947.2
ENSMUST00000236586.3
ENSMUST00000237358.2
ENSMUST00000237502.2
CDS-3UTR CCA 90 bp AAGAATTTCGAGTCTATCCTCCAAGGAACACAATGTTGTATGTCTGTGATGCTAGGCCTTGGAGAACAATaGATTTCCATTAAGAGACTC +
Preference number: 4 (lower is better)
Translates to: KNFESILQGTQCCMSVMLGLGEQ*ISIKRL
Trigger: GAGTCTCTTAATGGAAATCCATTGTTCTCCAAGGCC...TAGCATCACAGACATACAACATTGTGTTCCTTGGAGGATAGACTCGAAATTCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000025484.9
ENSMUST00000235766.3
ENSMUST00000236586.3
ENSMUST00000237358.2
3UTR CAA 72 bp AAGAGACAGCTATATCAGAGTCCTTTCAGCAAAATCTaGTTAGTGTATGCAATGGTGTCAGCATTTGGAAGC +
Preference number: 4 (lower is better)
Translates to: KRQLYQSPFSKI*LVYAMVSAFGS
Trigger: GCTTCCAAATGCTGACACCATTGCATACACTAACAAGATTTTGCTGAAAGGACTCTGATATAGCTGTCTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000235766.3
ENSMUST00000236586.3
3UTR CAA 72 bp TACTGGTTAGTTCATATTGTTGTTCCACCTATAAGGTaGCAGACCCCTTTAGCTCCTTGGATACTTTCTCTA +
Preference number: 4 (lower is better)
Translates to: YWLVHIVVPPIR*QTPLAPWILSL
Trigger: TAGAGAAAGTATCCAAGGAGCTAAAGGGGTCTGCAACCTTATAGGTGGAACAACAATATGAACTAACCAGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000235766.3
ENSMUST00000236586.3
CDS-3UTR CCA 90 bp TTCACTGCTAATTACAATGACAAACATTTGTACTTCACAGCTGACAGACAGGATGGCCTTGGAGAACAATaGATTTCCATTAAGAGACTC +
Preference number: 4 (lower is better)
Translates to: FTANYNDKHLYFTADRQDGLGEQ*ISIKRL
Trigger: GAGTCTCTTAATGGAAATCCATTGTTCTCCAAGGCC...ATCCTGTCTGTCAGCTGTGAAGTACAAATGTTTGTCATTGTAATTAGCAGTGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000235766.3
ENSMUST00000236586.3
3UTR CAA 72 bp TACCCACTCAGGATGATGCCCTCCAGGTCCATCCATTaGTCTAGGAATTTCATAAATTCATTCTTTTTAGTA +
Preference number: 4 (lower is better)
Translates to: YPLRMMPSRSIH*SRNFINSFFLV
Trigger: TACTAAAAAGAATGAATTTATGAAATTCCTAGACAAATGGATGGACCTGGAGGGCATCATCCTGAGTGGGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000235766.3
ENSMUST00000236586.3
3UTR CAA 72 bp GGATGTCCCAGTAGACAGATATTCCATATTGATAAATaGACCCCAGGATCAGTCACTATACTTGTATATGAA +
Preference number: 4 (lower is better)
Translates to: GCPSRQIFHIDK*TPGSVTILVYE
Trigger: TTCATATACAAGTATAGTGACTGATCCTGGGGTCAATTTATCAATATGGAATATCTGTCTACTGGGACATCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000025484.9
ENSMUST00000235215.2
ENSMUST00000235766.3
ENSMUST00000235947.2
ENSMUST00000236586.3
ENSMUST00000237358.2
ENSMUST00000237502.2
ENSMUST00000237680.2
3UTR CAA 72 bp AGGGGCAAAGTGTCCACACTTTGGTCTTCGTTCTTCTaGAGTTTCATGTGTTTAGCAAATTGTATCTTATAT +
Preference number: 4 (lower is better)
Translates to: RGKVSTLWSSFF*SFMCLANCILY
Trigger: ATATAAGATACAATTTGCTAAACACATGAAACTCAAGAAGAACGAAGACCAAAGTGTGGACACTTTGCCCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000235766.3
ENSMUST00000236586.3
CDS TCA 90 bp TCCGTGGTGGCTGCCACCGCAGCACCCGACTGGCACCTCCATGGCTaGCAGGCCCTTGAGCTGCCGTGCACCAGCGGCTCGCGGAGCAGA +
Preference number: 5 (lower is better)
Translates to: SVVAATAAPDWHLHG*QALELPCTSGSRSR
Trigger: TCTGCTCCGCGAGCCGCTGGTGCACGGCAGCTCAAGGGCCTGTCAGCCATGGAGGTGCCAGTCGGGTGCTGCGGTGGCAGCCACCACGGA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000235766.3
ENSMUST00000236586.3
ENSMUST00000237502.2
ENSMUST00000237680.2
CDS TCA 90 bp TCCGTGGTGGCTGCCACCGCAGCACCCGACTGGCACCTCCATGGCTaGCAGGCCCTTGAGCTGCCGTGCACCACTGGACCATTGGGGGCT +
Preference number: 5 (lower is better)
Translates to: SVVAATAAPDWHLHG*QALELPCTTGPLGA
Trigger: AGCCCCCAATGGTCCAGTGGTGCACGGCAGCTCAAGGGCCTGTCAGCCATGGAGGTGCCAGTCGGGTGCTGCGGTGGCAGCCACCACGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000237358.2
CDS TCA 90 bp TCCGTGGTGGCTGCCACCGCAGCACCCGACTGGCACCTCCATGGCTaGCAGGCCCTTGAGCTGCCGTGCACCACTGGTCGAAACTGGAAC +
Preference number: 5 (lower is better)
Translates to: SVVAATAAPDWHLHG*QALELPCTTGRNWN
Trigger: GTTCCAGTTTCGACCAGTGGTGCACGGCAGCTCAAGGGCCTGTCAGCCATGGAGGTGCCAGTCGGGTGCTGCGGTGGCAGCCACCACGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237891.2
CDS-3UTR CAA 90 bp AGCTTGGGGTTTGGTGGTCTTGGCATGATGTACCTTCTCCGTGGTGGCTGCCACCTGGCCCTGGGCGACTaGAACCCGCGGCCTCCCGGA +
Preference number: 5 (lower is better)
Translates to: SLGFGGLGMMYLLRGGCHLALGD*NPRPPG
Trigger: TCCGGGAGGCCGCGGGTTCAAGTCGCCCAGGGCCAG...GTGGCAGCCACCACGGAGAAGGTACATCATGCCAAGACCACCAAACCCCAAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000238149.2
CDS-3UTR CAA 90 bp CCATCGTCCCCACCGCAGGTGTCTGGAGGCTGCACATCTGCAAATCCCACGGGTTGGGCCACCTGTCGATaGTGCTCCACTTCATGGTGG +
Preference number: 5 (lower is better)
Translates to: PSSPPQVSGGCTSANPTGWATCR*CSTSWW
Trigger: CCACCATGAAGTGGAGCACAATCGACAGGTGGCCCA...ACCCGTGGGATTTGCAGATGTGCAGCCTCCAGACACCTGCGGTGGGGACGATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000025484.9
ENSMUST00000235766.3
ENSMUST00000236586.3
ENSMUST00000237358.2
ENSMUST00000237502.2
CDS-3UTR CAA 90 bp CCATCGTCCCCACCGCAGGTGTCTGGAGGCTGCACATCTGCAAATCCCACGGGTTGCGTGGAGCACAGCTaGTTGGACTGGATGTGGGAG +
Preference number: 5 (lower is better)
Translates to: PSSPPQVSGGCTSANPTGCVEHS*LDWMWE
Trigger: CTCCCACATCCAGTCCAACAAGCTGTGCTCCACGCA...ACCCGTGGGATTTGCAGATGTGCAGCCTCCAGACACCTGCGGTGGGGACGATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000025484.9
ENSMUST00000235766.3
ENSMUST00000236586.3
ENSMUST00000237358.2
CDS-3UTR CAA 90 bp TCCCCATCGTCCCCACCGCAGGTGTCTGGAGGCTGCACATCTGCAAATCCCACGTGCGTGGAGCACAGCTaGTTGGACTGGATGTGGGAG +
Preference number: 5 (lower is better)
Translates to: SPSSPPQVSGGCTSANPTCVEHS*LDWMWE
Trigger: CTCCCACATCCAGTCCAACAAGCTGTGCTCCACGCA...CGTGGGATTTGCAGATGTGCAGCCTCCAGACACCTGCGGTGGGGACGATGGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000025484.9
ENSMUST00000235766.3
ENSMUST00000236586.3
ENSMUST00000237358.2
CDS-3UTR CAA 90 bp CCATCGTCCCCACCGCAGGTGTCTGGAGGCTGCACATCTGCAAATCCCACGGGTTTGGAAGTCCACATCTaGATGGGGGATCCACCTCCG +
Preference number: 5 (lower is better)
Translates to: PSSPPQVSGGCTSANPTGLEVHI*MGDPPP
Trigger: CGGAGGTGGATCCCCCATCAAGATGTGGACTTCCAA...ACCCGTGGGATTTGCAGATGTGCAGCCTCCAGACACCTGCGGTGGGGACGATGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000025484.9
ENSMUST00000235766.3
ENSMUST00000236586.3
ENSMUST00000237358.2
ENSMUST00000237502.2
CDS-3UTR CAA 90 bp CAATGTTGTATGTCTGTGATGCTAACTAGCGCCCAGGAAACGGGAGCGGGAGGCATGGCTGACAGGCCCTaGAGCTGCCGTGCACCAGCG +
Preference number: 5 (lower is better)
Translates to: QCCMSVMLTSAQETGAGGMADRP*SCRAPA
Trigger: CGCTGGTGCACGGCAGCTCAAGGGCCTGTCAGCCAT...GCCTCCCGCTCCCGTTTCCTGGGCGCTAGTTAGCATCACAGACATACAACATTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000235766.3
ENSMUST00000236586.3
ENSMUST00000237502.2
ENSMUST00000237680.2
CDS-3UTR CAA 90 bp CGTCCCCACCGCAGGTGTCTGGAGGCTGCACATCTGCAAATCCCACGGGTCCTCCACCATGCCTTCTCCTaGCTTGGAAGTCCACATCTT +
Preference number: 5 (lower is better)
Translates to: RPHRRCLEAAHLQIPRVLHHAFS*LGSPHL
Trigger: AAGATGTGGACTTCCAAGCAAGGAGAAGGCATGGTG...GAGGACCCGTGGGATTTGCAGATGTGCAGCCTCCAGACACCTGCGGTGGGGACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000025484.9
ENSMUST00000235766.3
ENSMUST00000235947.2
ENSMUST00000236586.3
ENSMUST00000237358.2
ENSMUST00000237502.2
CDS-3UTR CAA 90 bp GGAGATGAGACTCTTGCAGTCACCACAGTGGCAGTGGACAGTGGCTACACTGTCTTGGGGGTTCGGCGTTaGGCGATGAATGGTGCCAGC +
Preference number: 5 (lower is better)
Translates to: GDETLAVTTVAVDSGYTVLGVRR*AMNGAS
Trigger: GCTGGCACCATTCATCGCCAAACGCCGAACCCCCAA...GACAGTGTAGCCACTGTCCACTGCCACTGTGGTGACTGCAAGAGTCTCATCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000025484.9
ENSMUST00000235766.3
ENSMUST00000236586.3
ENSMUST00000237502.2
CDS-3UTR CAA 90 bp TCAGTTTCCAGGGAGGGAGATGAGACTCTTGCAGTCACCACAGTGGCAGTGGACTTGGGGGTTCGGCGTTaGGCGATGAATGGTGCCAGC +
Preference number: 5 (lower is better)
Translates to: SVSREGDETLAVTTVAVDLGVRR*AMNGAS
Trigger: GCTGGCACCATTCATCGCCAAACGCCGAACCCCCAA...GTCCACTGCCACTGTGGTGACTGCAAGAGTCTCATCTCCCTCCCTGGAAACTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000025484.9
ENSMUST00000235766.3
ENSMUST00000236586.3
ENSMUST00000237502.2
CDS-3UTR CAA 90 bp CGTCCCCACCGCAGGTGTCTGGAGGCTGCACATCTGCAAATCCCACGGGTCCTCTCTCCATCTCTTCAATaGCCTCTTCTGTCAGGGGAT +
Preference number: 5 (lower is better)
Translates to: RPHRRCLEAAHLQIPRVLSPSLQ*PLLSGD
Trigger: ATCCCCTGACAGAAGAGGCAATTGAAGAGATGGAGA...GAGGACCCGTGGGATTTGCAGATGTGCAGCCTCCAGACACCTGCGGTGGGGACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000025484.9
ENSMUST00000235766.3
ENSMUST00000235947.2
ENSMUST00000236586.3
ENSMUST00000237358.2
ENSMUST00000237502.2
CDS-3UTR CAA 90 bp TGTATGTCTGTGATGCTAACTAGCGCCCAGGAAACGGGAGCGGGAGGCACACTGGTGGAGCACAGCTTGTaGGACTGGATGTGGGAGTGC +
Preference number: 5 (lower is better)
Translates to: CMSVMLTSAQETGAGGTLVEHSL*DWMWEC
Trigger: GCACTCCCACATCCAGTCCAACAAGCTGTGCTCCAC...CAGTGTGCCTCCCGCTCCCGTTTCCTGGGCGCTAGTTAGCATCACAGACATACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000025484.9
ENSMUST00000235766.3
ENSMUST00000236586.3
ENSMUST00000237358.2
CDS-3UTR CAA 90 bp GTCCCCATCGTCCCCACCGCAGGTGTCTGGAGGCTGCACATCTGCAAATCCCACATGCCTTCTCCTTGCTaGGAAGTCCACATCTTGATG +
Preference number: 5 (lower is better)
Translates to: VPIVPTAGVWRLHICKSHMPSPC*EVHILM
Trigger: CATCAAGATGTGGACTTCCAAGCAAGGAGAAGGCAT...GTGGGATTTGCAGATGTGCAGCCTCCAGACACCTGCGGTGGGGACGATGGGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000025484.9
ENSMUST00000235766.3
ENSMUST00000236586.3
ENSMUST00000237358.2
ENSMUST00000237502.2
CDS-3UTR CAA 90 bp CCATCGTCCCCACCGCAGGTGTCTGGAGGCTGCACATCTGCAAATCCCACGGGTATGCCTTCTCCTTGCTaGGAAGTCCACATCTTGATG +
Preference number: 5 (lower is better)
Translates to: PSSPPQVSGGCTSANPTGMPSPC*EVHILM
Trigger: CATCAAGATGTGGACTTCCAAGCAAGGAGAAGGCAT...ACCCGTGGGATTTGCAGATGTGCAGCCTCCAGACACCTGCGGTGGGGACGATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000025484.9
ENSMUST00000235766.3
ENSMUST00000236586.3
ENSMUST00000237358.2
ENSMUST00000237502.2
CDS-3UTR CAA 90 bp CAGTTTCCAGGGAGGGAGATGAGACTCTTGCAGTCACCACAGTGGCAGTGGACATGGGCCACCTGTCGATaGTGCTCCACTTCATGGTGG +
Preference number: 5 (lower is better)
Translates to: QFPGREMRLLQSPQWQWTWATCR*CSTSWW
Trigger: CCACCATGAAGTGGAGCACAATCGACAGGTGGCCCA...TGTCCACTGCCACTGTGGTGACTGCAAGAGTCTCATCTCCCTCCCTGGAAACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000025484.9
ENSMUST00000235766.3
ENSMUST00000236586.3
ENSMUST00000237502.2
CDS-3UTR CAA 90 bp CAGTTTCCAGGGAGGGAGATGAGACTCTTGCAGTCACCACAGTGGCAGTGGACAGTGGAGCACAGCTTGTaGGACTGGATGTGGGAGTGC +
Preference number: 5 (lower is better)
Translates to: QFPGREMRLLQSPQWQWTVEHSL*DWMWEC
Trigger: GCACTCCCACATCCAGTCCAACAAGCTGTGCTCCAC...TGTCCACTGCCACTGTGGTGACTGCAAGAGTCTCATCTCCCTCCCTGGAAACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000025484.9
ENSMUST00000235766.3
ENSMUST00000236586.3
CDS-3UTR CAA 90 bp GGAGATGAGACTCTTGCAGTCACCACAGTGGCAGTGGACAGTGGCTACACTGTCTGCGTGGAGCACAGCTaGTTGGACTGGATGTGGGAG +
Preference number: 5 (lower is better)
Translates to: GDETLAVTTVAVDSGYTVCVEHS*LDWMWE
Trigger: CTCCCACATCCAGTCCAACAAGCTGTGCTCCACGCA...GACAGTGTAGCCACTGTCCACTGCCACTGTGGTGACTGCAAGAGTCTCATCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000025484.9
ENSMUST00000235766.3
ENSMUST00000236586.3
CDS-3UTR CAA 90 bp TCCCCATCGTCCCCACCGCAGGTGTCTGGAGGCTGCACATCTGCAAATCCCACGCCTCTGAAGAAAGTCTaGAACTTCTCCAAGGGTTTC +
Preference number: 5 (lower is better)
Translates to: SPSSPPQVSGGCTSANPTPLKKV*NFSKGF
Trigger: GAAACCCTTGGAGAAGTTCAAGACTTTCTTCAGAGG...CGTGGGATTTGCAGATGTGCAGCCTCCAGACACCTGCGGTGGGGACGATGGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000025484.9
ENSMUST00000235215.2
ENSMUST00000235766.3
ENSMUST00000236586.3
ENSMUST00000237358.2
ENSMUST00000237502.2
ENSMUST00000237680.2
CDS-3UTR CAA 90 bp ACAGGCAAGAGAGAAATCACAGTTTGTGCCCAGACAAACGTGGCTTCTGTCCCCTTGGGGGTTCGGCGTTaGGCGATGAATGGTGCCAGC +
Preference number: 5 (lower is better)
Translates to: TGKREITVCAQTNVASVPLGVRR*AMNGAS
Trigger: GCTGGCACCATTCATCGCCAAACGCCGAACCCCCAA...GGGGACAGAAGCCACGTTTGTCTGGGCACAAACTGTGATTTCTCTCTTGCCTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000025484.9
ENSMUST00000235766.3
ENSMUST00000236586.3
ENSMUST00000237358.2
ENSMUST00000237502.2
CDS-3UTR CAA 90 bp AGGCAGGGTCACAGCTGTTGGCTGGTGAAGAAGGATTTAGTCTTCCTGCAGACATTGGGGGTTCGGCGTTaGGCGATGAATGGTGCCAGC +
Preference number: 5 (lower is better)
Translates to: RQGHSCWLVKKDLVFLQTLGVRR*AMNGAS
Trigger: GCTGGCACCATTCATCGCCAAACGCCGAACCCCCAA...TGTCTGCAGGAAGACTAAATCCTTCTTCACCAGCCAACAGCTGTGACCCTGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000235766.3
ENSMUST00000237502.2
CDS-3UTR CAA 90 bp GGACGTACCGGAATCCAATATAGTATTTGTGAGGTGCTGTGGCAGGGGATAACTATGGCTGACAGGCCCTaGAGCTGCCGTGCACCAGCG +
Preference number: 5 (lower is better)
Translates to: GRTGIQYSICEVLWQGITMADRP*SCRAPA
Trigger: CGCTGGTGCACGGCAGCTCAAGGGCCTGTCAGCCAT...AGTTATCCCCTGCCACAGCACCTCACAAATACTATATTGGATTCCGGTACGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000237680.2
CDS-3UTR CAA 90 bp GTCTGGAGGCTGCACATCTGCAAATCCCACGGGTCCTCAGGCAGGGTCACAGCTTGGTGCCAGCTTATTTaGAATGGGAAGTGTCATGAG +
Preference number: 5 (lower is better)
Translates to: VWRLHICKSHGSSGRVTAWCQLI*NGKCHE
Trigger: CTCATGACACTTCCCATTCAAAATAAGCTGGCACCA...AGCTGTGACCCTGCCTGAGGACCCGTGGGATTTGCAGATGTGCAGCCTCCAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000235766.3
ENSMUST00000237502.2
CDS-3UTR CAA 90 bp TGGCAGTGGACAGTGGCTACACTGTCAACAGAAGCAGTGCCAGGTGACCGCTCCATGCCTTCTCCTTGCTaGGAAGTCCACATCTTGATG +
Preference number: 5 (lower is better)
Translates to: WQWTVATLSTEAVPGDRSMPSPC*EVHILM
Trigger: CATCAAGATGTGGACTTCCAAGCAAGGAGAAGGCAT...GGAGCGGTCACCTGGCACTGCTTCTGTTGACAGTGTAGCCACTGTCCACTGCCA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000025484.9
ENSMUST00000235766.3
ENSMUST00000236586.3
ENSMUST00000237502.2
CDS-3UTR CAA 90 bp AGGGGACTGGGGGAAGGGATAATGGCTGTGTGCATAGCTGTCTGCCAACAGGAGCACCATGCCTTCTCCTaGCTTGGAAGTCCACATCTT +
Preference number: 5 (lower is better)
Translates to: RGLGEGIMAVCIAVCQQEHHAFS*LGSPHL
Trigger: AAGATGTGGACTTCCAAGCAAGGAGAAGGCATGGTG...CTCCTGTTGGCAGACAGCTATGCACACAGCCATTATCCCTTCCCCCAGTCCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000235766.3
ENSMUST00000236586.3
CDS-3UTR CAA 90 bp CTTGTTTCAGTTTCCAGGGAGGGAGATGAGACTCTTGCAGTCACCACAGTGGCATGGGCCACCTGTCGATaGTGCTCCACTTCATGGTGG +
Preference number: 5 (lower is better)
Translates to: LVSVSREGDETLAVTTVAWATCR*CSTSWW
Trigger: CCACCATGAAGTGGAGCACAATCGACAGGTGGCCCA...TGCCACTGTGGTGACTGCAAGAGTCTCATCTCCCTCCCTGGAAACTGAAACAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000025484.9
ENSMUST00000235766.3
ENSMUST00000236586.3
ENSMUST00000237502.2
CDS-3UTR CAA 90 bp ATGAGACTCTTGCAGTCACCACAGTGGCAGTGGACAGTGGCTACACTGTCAACATTGGAAGTCCACATCTaGATGGGGGATCCACCTCCG +
Preference number: 5 (lower is better)
Translates to: MRLLQSPQWQWTVATLSTLEVHI*MGDPPP
Trigger: CGGAGGTGGATCCCCCATCAAGATGTGGACTTCCAA...TGTTGACAGTGTAGCCACTGTCCACTGCCACTGTGGTGACTGCAAGAGTCTCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000025484.9
ENSMUST00000235766.3
ENSMUST00000236586.3
ENSMUST00000237502.2
CDS-3UTR CAA 90 bp TCAGTTTCCAGGGAGGGAGATGAGACTCTTGCAGTCACCACAGTGGCAGTGGACCACCATGCCTTCTCCTaGCTTGGAAGTCCACATCTT +
Preference number: 5 (lower is better)
Translates to: SVSREGDETLAVTTVAVDHHAFS*LGSPHL
Trigger: AAGATGTGGACTTCCAAGCAAGGAGAAGGCATGGTG...GTCCACTGCCACTGTGGTGACTGCAAGAGTCTCATCTCCCTCCCTGGAAACTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000025484.9
ENSMUST00000235766.3
ENSMUST00000235947.2
ENSMUST00000236586.3
ENSMUST00000237502.2
CDS-3UTR CAA 90 bp GGAACACAATGTTGTATGTCTGTGATGCTAACTAGCGCCCAGGAAACGGGAGCGTCTGCGATACTGCTCTaGAATTTTGGGGGTTCGGCG +
Preference number: 5 (lower is better)
Translates to: GTQCCMSVMLTSAQETGASAILL*NFGGSA
Trigger: CGCCGAACCCCCAAAATTCAAGAGCAGTATCGCAGA...CGCTCCCGTTTCCTGGGCGCTAGTTAGCATCACAGACATACAACATTGTGTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000025484.9
ENSMUST00000235766.3
ENSMUST00000236586.3
ENSMUST00000237358.2
ENSMUST00000237502.2
CDS-3UTR CAA 90 bp GTACCATCGTGTTTTGTGTTTGATGCAGGTGAGCACATGATCCCAAGCTGTGCGTTGGAAGTCCACATCTaGATGGGGGATCCACCTCCG +
Preference number: 5 (lower is better)
Translates to: VPSCFVFDAGEHMIPSCALEVHI*MGDPPP
Trigger: CGGAGGTGGATCCCCCATCAAGATGTGGACTTCCAA...CGCACAGCTTGGGATCATGTGCTCACCTGCATCAAACACAAAACACGATGGTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000025484.9
ENSMUST00000235766.3
ENSMUST00000236586.3
ENSMUST00000237502.2
CDS-3UTR CAA 90 bp TTCCTGGGATGTCCCAGTAGACAGATATTCCATATTGATAAATTGACCCCAGGAATGGCTGACAGGCCCTaGAGCTGCCGTGCACCAGCG +
Preference number: 5 (lower is better)
Translates to: FLGCPSRQIFHIDKLTPGMADRP*SCRAPA
Trigger: CGCTGGTGCACGGCAGCTCAAGGGCCTGTCAGCCAT...TCCTGGGGTCAATTTATCAATATGGAATATCTGTCTACTGGGACATCCCAGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000235766.3
ENSMUST00000236586.3
ENSMUST00000237502.2
ENSMUST00000237680.2
CDS-3UTR CAA 90 bp CAGTTTCCAGGGAGGGAGATGAGACTCTTGCAGTCACCACAGTGGCAGTGGACACCTCTGAAGAAAGTCTaGAACTTCTCCAAGGGTTTC +
Preference number: 5 (lower is better)
Translates to: QFPGREMRLLQSPQWQWTPLKKV*NFSKGF
Trigger: GAAACCCTTGGAGAAGTTCAAGACTTTCTTCAGAGG...TGTCCACTGCCACTGTGGTGACTGCAAGAGTCTCATCTCCCTCCCTGGAAACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000025484.9
ENSMUST00000235215.2
ENSMUST00000235766.3
ENSMUST00000236586.3
ENSMUST00000237502.2
CDS-3UTR CAA 90 bp CAGTTTCCAGGGAGGGAGATGAGACTCTTGCAGTCACCACAGTGGCAGTGGACATGGTGCCAGCTTATTTaGAATGGGAAGTGTCATGAG +
Preference number: 5 (lower is better)
Translates to: QFPGREMRLLQSPQWQWTWCQLI*NGKCHE
Trigger: CTCATGACACTTCCCATTCAAAATAAGCTGGCACCA...TGTCCACTGCCACTGTGGTGACTGCAAGAGTCTCATCTCCCTCCCTGGAAACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000025484.9
ENSMUST00000235766.3
ENSMUST00000236586.3
ENSMUST00000237502.2
CDS-3UTR CAA 90 bp AAGATAAAACACAGGCAAGAGAGAAATCACAGTTTGTGCCCAGACAAACGTGGCTTGGGGGTTCGGCGTTaGGCGATGAATGGTGCCAGC +
Preference number: 5 (lower is better)
Translates to: KIKHRQERNHSLCPDKRGLGVRR*AMNGAS
Trigger: GCTGGCACCATTCATCGCCAAACGCCGAACCCCCAA...GCCACGTTTGTCTGGGCACAAACTGTGATTTCTCTCTTGCCTGTGTTTTATCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000025484.9
ENSMUST00000235766.3
ENSMUST00000236586.3
ENSMUST00000237358.2
ENSMUST00000237502.2
CDS-3UTR CAA 90 bp AAGTTCCCTGAAAGGGGACTGGGGGAAGGGATAATGGCTGTGTGCATAGCTGTCATGCCTTCTCCTTGCTaGGAAGTCCACATCTTGATG +
Preference number: 5 (lower is better)
Translates to: KFPERGLGEGIMAVCIAVMPSPC*EVHILM
Trigger: CATCAAGATGTGGACTTCCAAGCAAGGAGAAGGCAT...GACAGCTATGCACACAGCCATTATCCCTTCCCCCAGTCCCCTTTCAGGGAACTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000235766.3
ENSMUST00000236586.3
CDS-3UTR CAA 90 bp GTTTCAGTTTCCAGGGAGGGAGATGAGACTCTTGCAGTCACCACAGTGGCAGTGTCTCCATCTCTTCAATaGCCTCTTCTGTCAGGGGAT +
Preference number: 5 (lower is better)
Translates to: VSVSREGDETLAVTTVAVSPSLQ*PLLSGD
Trigger: ATCCCCTGACAGAAGAGGCAATTGAAGAGATGGAGA...CACTGCCACTGTGGTGACTGCAAGAGTCTCATCTCCCTCCCTGGAAACTGAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000025484.9
ENSMUST00000235766.3
ENSMUST00000235947.2
ENSMUST00000236586.3
ENSMUST00000237502.2
CDS-3UTR CAA 90 bp TCTATCCTCCAAGGAACACAATGTTGTATGTCTGTGATGCTAACTAGCGCCCAGGTGGAGCACAGCTTGTaGGACTGGATGTGGGAGTGC +
Preference number: 5 (lower is better)
Translates to: SILQGTQCCMSVMLTSAQVEHSL*DWMWEC
Trigger: GCACTCCCACATCCAGTCCAACAAGCTGTGCTCCAC...CTGGGCGCTAGTTAGCATCACAGACATACAACATTGTGTTCCTTGGAGGATAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000025484.9
ENSMUST00000235766.3
ENSMUST00000236586.3
ENSMUST00000237358.2
CDS-3UTR CAA 90 bp GAGCCAAGACTGATGACAAGCAAGTTCCCTGAAAGGGGACTGGGGGAAGGGATATGGTGCCAGCTTATTTaGAATGGGAAGTGTCATGAG +
Preference number: 5 (lower is better)
Translates to: EPRLMTSKFPERGLGEGIWCQLI*NGKCHE
Trigger: CTCATGACACTTCCCATTCAAAATAAGCTGGCACCA...TATCCCTTCCCCCAGTCCCCTTTCAGGGAACTTGCTTGTCATCAGTCTTGGCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000235766.3
ENSMUST00000236586.3
CDS-3UTR CAA 90 bp AACACAGGCAAGAGAGAAATCACAGTTTGTGCCCAGACAAACGTGGCTTCTGTCTCTGCGATACTGCTCTaGAATTTTGGGGGTTCGGCG +
Preference number: 5 (lower is better)
Translates to: NTGKREITVCAQTNVASVSAILL*NFGGSA
Trigger: CGCCGAACCCCCAAAATTCAAGAGCAGTATCGCAGA...GACAGAAGCCACGTTTGTCTGGGCACAAACTGTGATTTCTCTCTTGCCTGTGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000025484.9
ENSMUST00000235766.3
ENSMUST00000236586.3
ENSMUST00000237358.2
ENSMUST00000237502.2
CDS-3UTR CAA 90 bp ATTAGGCTATGCGCCCGGGGAATCTTAGCACTCTTGAAACATGCACTTGTTTCATTGGAAGTCCACATCTaGATGGGGGATCCACCTCCG +
Preference number: 5 (lower is better)
Translates to: IRLCARGILALLKHALVSLEVHI*MGDPPP
Trigger: CGGAGGTGGATCCCCCATCAAGATGTGGACTTCCAA...TGAAACAAGTGCATGTTTCAAGAGTGCTAAGATTCCCCGGGCGCATAGCCTAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000025484.9
ENSMUST00000235766.3
ENSMUST00000236586.3
ENSMUST00000237502.2
CDS-3UTR CAA 90 bp AGGATCTATTCTACCGCTTCAAGAGGAAGAGAGGGAAATCTATTTTCAAGATCAATGGCTGACAGGCCCTaGAGCTGCCGTGCACCAGCG +
Preference number: 5 (lower is better)
Translates to: RIYSTASRGREGNLFSRSMADRP*SCRAPA
Trigger: CGCTGGTGCACGGCAGCTCAAGGGCCTGTCAGCCAT...TGATCTTGAAAATAGATTTCCCTCTCTTCCTCTTGAAGCGGTAGAATAGATCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000235766.3
ENSMUST00000236586.3
CDS-3UTR CAA 90 bp CTTGTTTCAGTTTCCAGGGAGGGAGATGAGACTCTTGCAGTCACCACAGTGGCACCTCTGAAGAAAGTCTaGAACTTCTCCAAGGGTTTC +
Preference number: 5 (lower is better)
Translates to: LVSVSREGDETLAVTTVAPLKKV*NFSKGF
Trigger: GAAACCCTTGGAGAAGTTCAAGACTTTCTTCAGAGG...TGCCACTGTGGTGACTGCAAGAGTCTCATCTCCCTCCCTGGAAACTGAAACAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000025484.9
ENSMUST00000235215.2
ENSMUST00000235766.3
ENSMUST00000236586.3
ENSMUST00000237502.2
CDS-3UTR CAA 90 bp TGTCTCTGTAACTCCGTCCATGGGTGTTTTGTTCCCAATTCTAAGAAGGGGCAATCTGCGATACTGCTCTaGAATTTTGGGGGTTCGGCG +
Preference number: 5 (lower is better)
Translates to: CLCNSVHGCFVPNSKKGQSAILL*NFGGSA
Trigger: CGCCGAACCCCCAAAATTCAAGAGCAGTATCGCAGA...TTGCCCCTTCTTAGAATTGGGAACAAAACACCCATGGACGGAGTTACAGAGACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000235766.3
ENSMUST00000236586.3
CDS-3UTR CAA 90 bp ATAAAACACAGGCAAGAGAGAAATCACAGTTTGTGCCCAGACAAACGTGGCTTCTTGGAAGTCCACATCTaGATGGGGGATCCACCTCCG +
Preference number: 5 (lower is better)
Translates to: IKHRQERNHSLCPDKRGFLEVHI*MGDPPP
Trigger: CGGAGGTGGATCCCCCATCAAGATGTGGACTTCCAA...GAAGCCACGTTTGTCTGGGCACAAACTGTGATTTCTCTCTTGCCTGTGTTTTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000025484.9
ENSMUST00000235766.3
ENSMUST00000236586.3
ENSMUST00000237358.2
ENSMUST00000237502.2
CDS-3UTR CAA 90 bp AACACAGGCAAGAGAGAAATCACAGTTTGTGCCCAGACAAACGTGGCTTCTGTCCACCATGCCTTCTCCTaGCTTGGAAGTCCACATCTT +
Preference number: 5 (lower is better)
Translates to: NTGKREITVCAQTNVASVHHAFS*LGSPHL
Trigger: AAGATGTGGACTTCCAAGCAAGGAGAAGGCATGGTG...GACAGAAGCCACGTTTGTCTGGGCACAAACTGTGATTTCTCTCTTGCCTGTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000025484.9
ENSMUST00000235766.3
ENSMUST00000235947.2
ENSMUST00000236586.3
ENSMUST00000237358.2
ENSMUST00000237502.2
CDS-3UTR CAA 90 bp GTACCATCGTGTTTTGTGTTTGATGCAGGTGAGCACATGATCCCAAGCTGTGCGTCTCCATCTCTTCAATaGCCTCTTCTGTCAGGGGAT +
Preference number: 5 (lower is better)
Translates to: VPSCFVFDAGEHMIPSCASPSLQ*PLLSGD
Trigger: ATCCCCTGACAGAAGAGGCAATTGAAGAGATGGAGA...CGCACAGCTTGGGATCATGTGCTCACCTGCATCAAACACAAAACACGATGGTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000025484.9
ENSMUST00000235766.3
ENSMUST00000235947.2
ENSMUST00000236586.3
ENSMUST00000237502.2
CDS-3UTR CAA 90 bp AGGCAAGAGAGAAATCACAGTTTGTGCCCAGACAAACGTGGCTTCTGTCCCCATTGGTGCCAGCTTATTTaGAATGGGAAGTGTCATGAG +
Preference number: 5 (lower is better)
Translates to: RQERNHSLCPDKRGFCPHWCQLI*NGKCHE
Trigger: CTCATGACACTTCCCATTCAAAATAAGCTGGCACCA...ATGGGGACAGAAGCCACGTTTGTCTGGGCACAAACTGTGATTTCTCTCTTGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000025484.9
ENSMUST00000235766.3
ENSMUST00000236586.3
ENSMUST00000237358.2
ENSMUST00000237502.2
CDS-3UTR CAA 90 bp AAGATAAAACACAGGCAAGAGAGAAATCACAGTTTGTGCCCAGACAAACGTGGCTCTGCGATACTGCTCTaGAATTTTGGGGGTTCGGCG +
Preference number: 5 (lower is better)
Translates to: KIKHRQERNHSLCPDKRGSAILL*NFGGSA
Trigger: CGCCGAACCCCCAAAATTCAAGAGCAGTATCGCAGA...GCCACGTTTGTCTGGGCACAAACTGTGATTTCTCTCTTGCCTGTGTTTTATCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000025484.9
ENSMUST00000235766.3
ENSMUST00000236586.3
ENSMUST00000237358.2
ENSMUST00000237502.2
CDS-3UTR CAA 90 bp TCTATCCTCCAAGGAACACAATGTTGTATGTCTGTGATGCTAACTAGCGCCCAGCACCATGCCTTCTCCTaGCTTGGAAGTCCACATCTT +
Preference number: 5 (lower is better)
Translates to: SILQGTQCCMSVMLTSAQHHAFS*LGSPHL
Trigger: AAGATGTGGACTTCCAAGCAAGGAGAAGGCATGGTG...CTGGGCGCTAGTTAGCATCACAGACATACAACATTGTGTTCCTTGGAGGATAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000025484.9
ENSMUST00000235766.3
ENSMUST00000235947.2
ENSMUST00000236586.3
ENSMUST00000237358.2
ENSMUST00000237502.2
CDS-3UTR CAA 90 bp CAAGGAACACAATGTTGTATGTCTGTGATGCTAACTAGCGCCCAGGAAACGGGACCTCTGAAGAAAGTCTaGAACTTCTCCAAGGGTTTC +
Preference number: 5 (lower is better)
Translates to: QGTQCCMSVMLTSAQETGPLKKV*NFSKGF
Trigger: GAAACCCTTGGAGAAGTTCAAGACTTTCTTCAGAGG...TCCCGTTTCCTGGGCGCTAGTTAGCATCACAGACATACAACATTGTGTTCCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000025484.9
ENSMUST00000235215.2
ENSMUST00000235766.3
ENSMUST00000236586.3
ENSMUST00000237358.2
ENSMUST00000237502.2
ENSMUST00000237680.2
CDS-3UTR CAA 90 bp AATTTCGAGTCTATCCTCCAAGGAACACAATGTTGTATGTCTGTGATGCTAACTTGGGCCACCTGTCGATaGTGCTCCACTTCATGGTGG +
Preference number: 5 (lower is better)
Translates to: NFESILQGTQCCMSVMLTWATCR*CSTSWW
Trigger: CCACCATGAAGTGGAGCACAATCGACAGGTGGCCCA...AGTTAGCATCACAGACATACAACATTGTGTTCCTTGGAGGATAGACTCGAAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000025484.9
ENSMUST00000235766.3
ENSMUST00000236586.3
ENSMUST00000237358.2
ENSMUST00000237502.2
CDS-3UTR CAA 90 bp GGATGTCCCAGTAGACAGATATTCCATATTGATAAATTGACCCCAGGATCAGTCCACCATGCCTTCTCCTaGCTTGGAAGTCCACATCTT +
Preference number: 5 (lower is better)
Translates to: GCPSRQIFHIDKLTPGSVHHAFS*LGSPHL
Trigger: AAGATGTGGACTTCCAAGCAAGGAGAAGGCATGGTG...GACTGATCCTGGGGTCAATTTATCAATATGGAATATCTGTCTACTGGGACATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000025484.9
ENSMUST00000235766.3
ENSMUST00000235947.2
ENSMUST00000236586.3
ENSMUST00000237358.2
ENSMUST00000237502.2
CDS-3UTR CAA 90 bp TATTCTACCGCTTCAAGAGGAAGAGAGGGAAATCTATTTTCAAGATCATCTGAAGTGGAGCACAGCTTGTaGGACTGGATGTGGGAGTGC +
Preference number: 5 (lower is better)
Translates to: YSTASRGREGNLFSRSSEVEHSL*DWMWEC
Trigger: GCACTCCCACATCCAGTCCAACAAGCTGTGCTCCAC...TTCAGATGATCTTGAAAATAGATTTCCCTCTCTTCCTCTTGAAGCGGTAGAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000235766.3
ENSMUST00000236586.3
CDS TCA 90 bp CACCTTCGAAACTCCAAGTACATTTCTTTTGAATGGGAAGTGTCATaGGGTCTCGGTCCAGGAAGAGCCTCTGAAGAAAGTCTTGAACTT +
Preference number: 5 (lower is better)
Translates to: HLRNSKYISFEWEVS*GLGPGRASEESLEL
Trigger: AAGTTCAAGACTTTCTTCAGAGGCTCTTCCTGGACCGAGACCTCATGACACTTCCCATTCAAAAGAAATGTACTTGGAGTTTCGAAGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000237680.2
CDS-3UTR CAA 90 bp AAGATAAAACACAGGCAAGAGAGAAATCACAGTTTGTGCCCAGACAAACGTGGCTGGTGCCAGCTTATTTaGAATGGGAAGTGTCATGAG +
Preference number: 5 (lower is better)
Translates to: KIKHRQERNHSLCPDKRGWCQLI*NGKCHE
Trigger: CTCATGACACTTCCCATTCAAAATAAGCTGGCACCA...GCCACGTTTGTCTGGGCACAAACTGTGATTTCTCTCTTGCCTGTGTTTTATCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000025484.9
ENSMUST00000235766.3
ENSMUST00000236586.3
ENSMUST00000237358.2
ENSMUST00000237502.2
CDS-3UTR CAA 90 bp AACTGTGAAACTCATTCCTGGGATGTCCCAGTAGACAGATATTCCATATTGATATCTGCGATACTGCTCTaGAATTTTGGGGGTTCGGCG +
Preference number: 5 (lower is better)
Translates to: NCETHSWDVPVDRYSILISAILL*NFGGSA
Trigger: CGCCGAACCCCCAAAATTCAAGAGCAGTATCGCAGA...TATCAATATGGAATATCTGTCTACTGGGACATCCCAGGAATGAGTTTCACAGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000025484.9
ENSMUST00000235766.3
ENSMUST00000236586.3
ENSMUST00000237502.2
CDS-3UTR CAA 90 bp TTCCTGGGATGTCCCAGTAGACAGATATTCCATATTGATAAATTGACCCCAGGAATGCCTTCTCCTTGCTaGGAAGTCCACATCTTGATG +
Preference number: 5 (lower is better)
Translates to: FLGCPSRQIFHIDKLTPGMPSPC*EVHILM
Trigger: CATCAAGATGTGGACTTCCAAGCAAGGAGAAGGCAT...TCCTGGGGTCAATTTATCAATATGGAATATCTGTCTACTGGGACATCCCAGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000025484.9
ENSMUST00000235766.3
ENSMUST00000236586.3
ENSMUST00000237358.2
ENSMUST00000237502.2
CDS-3UTR CAA 90 bp GGATGTCCCAGTAGACAGATATTCCATATTGATAAATTGACCCCAGGATCAGTCTCTCCATCTCTTCAATaGCCTCTTCTGTCAGGGGAT +
Preference number: 5 (lower is better)
Translates to: GCPSRQIFHIDKLTPGSVSPSLQ*PLLSGD
Trigger: ATCCCCTGACAGAAGAGGCAATTGAAGAGATGGAGA...GACTGATCCTGGGGTCAATTTATCAATATGGAATATCTGTCTACTGGGACATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000025484.9
ENSMUST00000235766.3
ENSMUST00000235947.2
ENSMUST00000236586.3
ENSMUST00000237358.2
ENSMUST00000237502.2
CDS-3UTR CAA 90 bp CTGGGATGTCCCAGTAGACAGATATTCCATATTGATAAATTGACCCCAGGATCACCTCTGAAGAAAGTCTaGAACTTCTCCAAGGGTTTC +
Preference number: 5 (lower is better)
Translates to: LGCPSRQIFHIDKLTPGSPLKKV*NFSKGF
Trigger: GAAACCCTTGGAGAAGTTCAAGACTTTCTTCAGAGG...TGATCCTGGGGTCAATTTATCAATATGGAATATCTGTCTACTGGGACATCCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000025484.9
ENSMUST00000235215.2
ENSMUST00000235766.3
ENSMUST00000236586.3
ENSMUST00000237358.2
ENSMUST00000237502.2
ENSMUST00000237680.2
CDS-3UTR CAA 90 bp AAGAATTTCGAGTCTATCCTCCAAGGAACACAATGTTGTATGTCTGTGATGCTATCTCCATCTCTTCAATaGCCTCTTCTGTCAGGGGAT +
Preference number: 5 (lower is better)
Translates to: KNFESILQGTQCCMSVMLSPSLQ*PLLSGD
Trigger: ATCCCCTGACAGAAGAGGCAATTGAAGAGATGGAGA...TAGCATCACAGACATACAACATTGTGTTCCTTGGAGGATAGACTCGAAATTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000025484.9
ENSMUST00000235766.3
ENSMUST00000235947.2
ENSMUST00000236586.3
ENSMUST00000237358.2
ENSMUST00000237502.2
CDS-3UTR CAA 90 bp GTAATTCCAGTTCTTCACAAACCATTCCACAAAATAGAAGCAGAAGGTACTCTATCTCCATCTCTTCAATaGCCTCTTCTGTCAGGGGAT +
Preference number: 5 (lower is better)
Translates to: VIPVLHKPFHKIEAEGTLSPSLQ*PLLSGD
Trigger: ATCCCCTGACAGAAGAGGCAATTGAAGAGATGGAGA...TAGAGTACCTTCTGCTTCTATTTTGTGGAATGGTTTGTGAAGAACTGGAATTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000235766.3
ENSMUST00000236586.3
CDS TCA 72 bp GCTGCCACCGCAGCACCCGACTGGCACCTCCATGGCTaGCAGGCCCTTGAGCTGCCGTGCACCAGCGGCTCG +
Preference number: 6 (lower is better)
Translates to: AATAAPDWHLHG*QALELPCTSGS
Trigger: CGAGCCGCTGGTGCACGGCAGCTCAAGGGCCTGTCAGCCATGGAGGTGCCAGTCGGGTGCTGCGGTGGCAGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000235766.3
ENSMUST00000236586.3
ENSMUST00000237502.2
ENSMUST00000237680.2
CDS CAA 72 bp GCAACTGCTAGAGCCCCGCAGCTGGCCCTGGGCGACTaGAACCCGCGGCCTCCCGGACGCTCCTCACGTTCG +
Preference number: 6 (lower is better)
Translates to: ATARAPQLALGD*NPRPPGRSSRS
Trigger: CGAACGTGAGGAGCGTCCGGGAGGCCGCGGGTTCAAGTCGCCCAGGGCCAGCTGCGGGGCTCTAGCAGTTGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000238149.2
CDS TCA 72 bp GCTGCCACCGCAGCACCCGACTGGCACCTCCATGGCTaGCAGGCCCTTGAGCTGCCGTGCACCACTGGACCA +
Preference number: 6 (lower is better)
Translates to: AATAAPDWHLHG*QALELPCTTGP
Trigger: TGGTCCAGTGGTGCACGGCAGCTCAAGGGCCTGTCAGCCATGGAGGTGCCAGTCGGGTGCTGCGGTGGCAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237358.2
CDS TCA 72 bp GCTGCCACCGCAGCACCCGACTGGCACCTCCATGGCTaGCAGGCCCTTGAGCTGCCGTGCACCACTGGTCGA +
Preference number: 6 (lower is better)
Translates to: AATAAPDWHLHG*QALELPCTTGR
Trigger: TCGACCAGTGGTGCACGGCAGCTCAAGGGCCTGTCAGCCATGGAGGTGCCAGTCGGGTGCTGCGGTGGCAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237891.2
CDS CAA 90 bp ACTAAATCAGCAACTGCTAGAGCCCCGCAGCTGGCCCTGGGCGACTaGAACCCGCGGCCTCCCGGACGCTCCTCACGTTCGCGAACGCAG +
Preference number: 6 (lower is better)
Translates to: TKSATARAPQLALGD*NPRPPGRSSRSRTQ
Trigger: CTGCGTTCGCGAACGTGAGGAGCGTCCGGGAGGCCGCGGGTTCAAGTCGCCCAGGGCCAGCTGCGGGGCTCTAGCAGTTGCTGATTTAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000238149.2
CDS TCA 72 bp GAGATGAGTAAAACTTCTTTTGAATGGGAAGTGTCATaGGGTCTCGGTCCAGGAAGAGCCTCTGAAGAAAGT +
Preference number: 6 (lower is better)
Translates to: EMSKTSFEWEVS*GLGPGRASEES
Trigger: ACTTTCTTCAGAGGCTCTTCCTGGACCGAGACCTCATGACACTTCCCATTCAAAAGAAGTTTTACTCATCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000235215.2
CDS TCA 72 bp AACTCCAAGTACATTTCTTTTGAATGGGAAGTGTCATaGGGTCTCGGTCCAGGAAGAGCCTCTGAAGAAAGT +
Preference number: 6 (lower is better)
Translates to: NSKYISFEWEVS*GLGPGRASEES
Trigger: ACTTTCTTCAGAGGCTCTTCCTGGACCGAGACCTCATGACACTTCCCATTCAAAAGAAATGTACTTGGAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000237680.2
CDS TCA 72 bp TTTATTCCACCTTCGAAACTCCAAGTACATTTCTTTTaGATGGGAAGTGTCATGAGGTCTCGGTCCAGGAAG +
Preference number: 6 (lower is better)
Translates to: FIPPSKLQVHFF*MGSVMRSRSRK
Trigger: CTTCCTGGACCGAGACCTCATGACACTTCCCATTCAAAAGAAATGTACTTGGAGTTTCGAAGGTGGAATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000237680.2