Pregenerated sensors for FDXR (Mus musculus)
Ensembl gene IDs: ENSMUSG00000018861Ensembl transcript IDs: ENSMUST00000021078.3
Found 90 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTTCAGGTTCCCTCCTTGGCCTCAAGCCACACTGGGAGGTCAGCTTaGAGAAGGCAGAGCTCAGAGGCCCCTGGAAAGGGCACGGTTCGG | + |
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Preference number: 1 (lower is better) Translates to: LQVPSLASSHTGRSA*RRQSSEAPGKGTVR Trigger: CCGAACCGTGCCCTTTCCAGGGGCCTCTGAGCTCTGCCTTCTGCAAGCTGACCTCCCAGTGTGGCTTGAGGCCAAGGAGGGAACCTGAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021078.3 |
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| 3UTR CCA 90 bp | GGTCAGTCTGTATCTCCATCCATCCCTAGCTTCAGGTTCCCTCCTTaGCCTCAAGCCACACTGGGAGGTCAGCTTGCAGAAGGCAGAGCT | + |
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Preference number: 1 (lower is better) Translates to: GQSVSPSIPSFRFPP*PQATLGGQLAEGRA Trigger: AGCTCTGCCTTCTGCAAGCTGACCTCCCAGTGTGGCTTGAGGCCAAGGAGGGAACCTGAAGCTAGGGATGGATGGAGATACAGACTGACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021078.3 |
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| 3UTR CAA 90 bp | GCTTCAGGTTCCCTCCTTGGCCTCAAGCCACACTGGGAGGTCAGCTaGCAGAAGGCAGAGCTCAGAGGCCCCTGGAAAGGGCACGGTTCG | + |
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Preference number: 2 (lower is better) Translates to: ASGSLLGLKPHWEVS*QKAELRGPWKGHGS Trigger: CGAACCGTGCCCTTTCCAGGGGCCTCTGAGCTCTGCCTTCTGCAAGCTGACCTCCCAGTGTGGCTTGAGGCCAAGGAGGGAACCTGAAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021078.3 |
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| 3UTR-3UTR GCA 90 bp | CAGTCTGTATCTCCATCCATCCCTAGCTTCAGGTTCCCTCCTTGGCCTCAAGCCGTCCGGCTCTTGTCTTaGACGGTAGGGGCTGGGGCC | + |
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Preference number: 2 (lower is better) Translates to: QSVSPSIPSFRFPPWPQAVRLLS*TVGAGA Trigger: GGCCCCAGCCCCTACCGTGCAAGACAAGAGCCGGAC...GGCTTGAGGCCAAGGAGGGAACCTGAAGCTAGGGATGGATGGAGATACAGACTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021078.3 |
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| 3UTR-3UTR GCA 90 bp | TTCCGTTCTAGAGGCCCTCCAAGGTCCATCAGAAAGGAAGCAGGACGGGTAGGGACTGGGAGGTCAGCTTaGAGAAGGCAGAGCTCAGAG | + |
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Preference number: 2 (lower is better) Translates to: FRSRGPPRSIRKEAGRVGTGRSA*RRQSSE Trigger: CTCTGAGCTCTGCCTTCTGCAAGCTGACCTCCCAGT...CCCTACCCGTCCTGCTTCCTTTCTGATGGACCTTGGAGGGCCTCTAGAACGGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021078.3 |
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| 3UTR-3UTR CCA 90 bp | TTTCCACTGTGTTCCGTTCTAGAGGCCCTCCAAGGTCCATCAGAAAGGAAGCAGGGCCTCAAGCCACACTaGGAGGTCAGCTTGCAGAAG | + |
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Preference number: 2 (lower is better) Translates to: FPLCSVLEALQGPSERKQGLKPH*EVSLQK Trigger: CTTCTGCAAGCTGACCTCCCAGTGTGGCTTGAGGCC...CTGCTTCCTTTCTGATGGACCTTGGAGGGCCTCTAGAACGGAACACAGTGGAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021078.3 |
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| 3UTR CCA 72 bp | CTAGCTTCAGGTTCCCTCCTTGGCCTCAAGCCACACTaGGAGGTCAGCTTGCAGAAGGCAGAGCTCAGAGGC | + |
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Preference number: 3 (lower is better) Translates to: LASGSLLGLKPH*EVSLQKAELRG Trigger: GCCTCTGAGCTCTGCCTTCTGCAAGCTGACCTCCCAGTGTGGCTTGAGGCCAAGGAGGGAACCTGAAGCTAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021078.3 |
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| 3UTR-3UTR CAA 90 bp | TTCCGTTCTAGAGGCCCTCCAAGGTCCATCAGAAAGGAAGCAGGACGGGTAGGGCTTCAGGTTCCCTCCTaGGCCTCAAGCCACACTGGG | + |
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Preference number: 3 (lower is better) Translates to: FRSRGPPRSIRKEAGRVGLQVPS*ASSHTG Trigger: CCCAGTGTGGCTTGAGGCCAAGGAGGGAACCTGAAG...CCCTACCCGTCCTGCTTCCTTTCTGATGGACCTTGGAGGGCCTCTAGAACGGAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021078.3 |
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| CDS-3UTR CCA 90 bp | GAACGAGAGAAGAGTCCAACCCAGACTGTCCGGCTCTTGTCTTGCACGGTAGGGCTCCAGGTGCTCAGGTaGGGTCAGCAGGATCCGGGC | + |
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Preference number: 4 (lower is better) Translates to: EREKSPTQTVRLLSCTVGLQVLR*GQQDPG Trigger: GCCCGGATCCTGCTGACCCCACCTGAGCACCTGGAG...CCCTACCGTGCAAGACAAGAGCCGGACAGTCTGGGTTGGACTCTTCTCTCGTTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021078.3 |
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| CDS-3UTR CCA 90 bp | GTTCCCTCCTTGGCCTCAAGCCACACTGGGAGGTCAGCTTGCAGAAGGCAGAGCGTAGGGAGCACCTGCTaGGGGCTTCGGAAAAAGCGG | + |
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Preference number: 4 (lower is better) Translates to: VPSLASSHTGRSACRRQSVGSTC*GLRKKR Trigger: CCGCTTTTTCCGAAGCCCCCAGCAGGTGCTCCCTAC...GCTCTGCCTTCTGCAAGCTGACCTCCCAGTGTGGCTTGAGGCCAAGGAGGGAAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021078.3 |
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| CDS-3UTR CCA 90 bp | GTTCCCTCCTTGGCCTCAAGCCACACTGGGAGGTCAGCTTGCAGAAGGCAGAGCTGGGCACTGCCCGAGTaGACTCCCCAACACCCTCTA | + |
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Preference number: 4 (lower is better) Translates to: VPSLASSHTGRSACRRQSWALPE*TPQHPL Trigger: TAGAGGGTGTTGGGGAGTCCACTCGGGCAGTGCCCA...GCTCTGCCTTCTGCAAGCTGACCTCCCAGTGTGGCTTGAGGCCAAGGAGGGAAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021078.3 |
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| CDS-3UTR TCA 90 bp | CTGTATCTCCATCCATCCCTAGCTTCAGGTTCCCTCCTTGGCCTCAAGCCACACCACAAAGGCCCGGGCTaGGACCACTCCAGGCAGCTC | + |
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Preference number: 4 (lower is better) Translates to: LYLHPSLASGSLLGLKPHHKGPG*DHSRQL Trigger: GAGCTGCCTGGAGTGGTCTCAGCCCGGGCCTTTGTG...GTGTGGCTTGAGGCCAAGGAGGGAACCTGAAGCTAGGGATGGATGGAGATACAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021078.3 |
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| CDS-3UTR GCA 90 bp | CTAGCTTCAGGTTCCCTCCTTGGCCTCAAGCCACACTGGGAGGTCAGCTTGCAGAGCCAGCTGGGCCACTaGCGACCACACAGATCTGAG | + |
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Preference number: 4 (lower is better) Translates to: LASGSLLGLKPHWEVSLQSQLGH*RPHRSE Trigger: CTCAGATCTGTGTGGTCGGCAGTGGCCCAGCTGGCT...CTGCAAGCTGACCTCCCAGTGTGGCTTGAGGCCAAGGAGGGAACCTGAAGCTAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021078.3 |
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| CDS-3UTR GCA 90 bp | AGGTTCCCTCCTTGGCCTCAAGCCACACTGGGAGGTCAGCTTGCAGAAGGCAGAGAACCGACACGTCCCTaGCCACCACCACATTGCCCT | + |
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Preference number: 4 (lower is better) Translates to: RFPPWPQATLGGQLAEGREPTRP*PPPHCP Trigger: AGGGCAATGTGGTGGTGGGCAGGGACGTGTCGGTTC...TCTGCCTTCTGCAAGCTGACCTCCCAGTGTGGCTTGAGGCCAAGGAGGGAACCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021078.3 |
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| CDS-3UTR CCA 90 bp | TCTCCATCCATCCCTAGCTTCAGGTTCCCTCCTTGGCCTCAAGCCACACTGGGACCTCCACGTCTCCTGTaGGCACTGCCCGAGTGGACT | + |
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Preference number: 4 (lower is better) Translates to: SPSIPSFRFPPWPQATLGPPRLL*ALPEWT Trigger: AGTCCACTCGGGCAGTGCCCACAGGAGACGTGGAGG...TCCCAGTGTGGCTTGAGGCCAAGGAGGGAACCTGAAGCTAGGGATGGATGGAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021078.3 |
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| CDS-3UTR CCA 90 bp | CTGTATCTCCATCCATCCCTAGCTTCAGGTTCCCTCCTTGGCCTCAAGCCACACGGTCAAAGGGCACGCTaGGGTCGATGGGGCGGCTCT | + |
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Preference number: 4 (lower is better) Translates to: LYLHPSLASGSLLGLKPHGQRAR*GRWGGS Trigger: AGAGCCGCCCCATCGACCCCAGCGTGCCCTTTGACC...GTGTGGCTTGAGGCCAAGGAGGGAACCTGAAGCTAGGGATGGATGGAGATACAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021078.3 |
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| CDS-3UTR CCA 90 bp | GCTTCAGGTTCCCTCCTTGGCCTCAAGCCACACTGGGAGGTCAGCTTGCAGAAGTCCTCCAGCAGCGCCTaGCTGGTGAGGAAGCTGTCT | + |
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Preference number: 4 (lower is better) Translates to: ASGSLLGLKPHWEVSLQKSSSSA*LVRKLS Trigger: AGACAGCTTCCTCACCAGCCAGGCGCTGCTGGAGGA...CTTCTGCAAGCTGACCTCCCAGTGTGGCTTGAGGCCAAGGAGGGAACCTGAAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021078.3 |
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| CDS-3UTR CCA 90 bp | TTTCCACTGTGTTCCGTTCTAGAGGCCCTCCAAGGTCCATCAGAAAGGAAGCAGCCACATAGCCGGGTCTaGGGCCGGAGGGCAGCAGCC | + |
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Preference number: 4 (lower is better) Translates to: FPLCSVLEALQGPSERKQPHSRV*GRRAAA Trigger: GGCTGCTGCCCTCCGGCCCCAGACCCGGCTATGTGG...CTGCTTCCTTTCTGATGGACCTTGGAGGGCCTCTAGAACGGAACACAGTGGAAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021078.3 |
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| CDS-3UTR TCA 90 bp | GCTTCAGGTTCCCTCCTTGGCCTCAAGCCACACTGGGAGGTCAGCTTGCAGAAGCCGACCACACAGATCTaGGGGGTCTTCTCCTGTGTG | + |
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Preference number: 4 (lower is better) Translates to: ASGSLLGLKPHWEVSLQKPTTQI*GVFSCV Trigger: CACACAGGAGAAGACCCCTCAGATCTGTGTGGTCGG...CTTCTGCAAGCTGACCTCCCAGTGTGGCTTGAGGCCAAGGAGGGAACCTGAAGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021078.3 |
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| CDS-3UTR TCA 90 bp | GCTTCAGGTTCCCTCCTTGGCCTCAAGCCACACTGGGAGGTCAGCTTGCAGAAGCAGCTTCTCCCAGTCTaGGAAAGACACTGGCCGGAC | + |
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Preference number: 4 (lower is better) Translates to: ASGSLLGLKPHWEVSLQKQLLPV*ERHWPD Trigger: GTCCGGCCAGTGTCTTTCTCAGACTGGGAGAAGCTG...CTTCTGCAAGCTGACCTCCCAGTGTGGCTTGAGGCCAAGGAGGGAACCTGAAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021078.3 |
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| CDS-3UTR GCA 90 bp | GAACGAGAGAAGAGTCCAACCCAGACTGTCCGGCTCTTGTCTTGCACGGTAGGGTGCCCACCACCACATTaGCCTGGAAGGCACAGCGGT | + |
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Preference number: 4 (lower is better) Translates to: EREKSPTQTVRLLSCTVGCPPPH*PGRHSG Trigger: ACCGCTGTGCCTTCCAGGGCAATGTGGTGGTGGGCA...CCCTACCGTGCAAGACAAGAGCCGGACAGTCTGGGTTGGACTCTTCTCTCGTTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021078.3 |
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| CDS-3UTR GCA 90 bp | TTCCGTTCTAGAGGCCCTCCAAGGTCCATCAGAAAGGAAGCAGGACGGGTAGGGGTCTTCACCCGACTCTaGCTCAGGGCCCCCAATGCA | + |
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Preference number: 4 (lower is better) Translates to: FRSRGPPRSIRKEAGRVGVFTRL*LRAPNA Trigger: TGCATTGGGGGCCCTGAGGCAGAGTCGGGTGAAGAC...CCCTACCCGTCCTGCTTCCTTTCTGATGGACCTTGGAGGGCCTCTAGAACGGAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021078.3 |
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| CDS-3UTR CCA 90 bp | TCTCCATCCATCCCTAGCTTCAGGTTCCCTCCTTGGCCTCAAGCCACACTGGGAGCACGCTGGGGTCGATaGGGCGGCTCTTATACCCAA | + |
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Preference number: 4 (lower is better) Translates to: SPSIPSFRFPPWPQATLGARWGR*GGSYTQ Trigger: TTGGGTATAAGAGCCGCCCCATCGACCCCAGCGTGC...TCCCAGTGTGGCTTGAGGCCAAGGAGGGAACCTGAAGCTAGGGATGGATGGAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021078.3 |
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| CDS-3UTR CCA 90 bp | AGGACGGGTAGGGTCAGTCTGTATCTCCATCCATCCCTAGCTTCAGGTTCCCTCTACCCGTTGGCCATCTaGGGTAGGGAGCACCTGCTG | + |
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Preference number: 4 (lower is better) Translates to: RTGRVSLYLHPSLASGSLYPLAI*GREHLL Trigger: CAGCAGGTGCTCCCTACCCCAGATGGCCAACGGGTA...GAGGGAACCTGAAGCTAGGGATGGATGGAGATACAGACTGACCCTACCCGTCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021078.3 |
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| CDS-3UTR GCA 90 bp | CCCTCCAAGGTCCATCAGAAAGGAAGCAGGACGGGTAGGGTCAGTCTGTATCTCCCTCAGGGCCCCCAATaGAGCCTCTGTGATGTCTGT | + |
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Preference number: 4 (lower is better) Translates to: PSKVHQKGSRTGRVSLYLPQGPQ*SLCDVC Trigger: ACAGACATCACAGAGGCTGCATTGGGGGCCCTGAGG...GAGATACAGACTGACCCTACCCGTCCTGCTTCCTTTCTGATGGACCTTGGAGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021078.3 |
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| CDS-3UTR GCA 90 bp | AGGGCCGTCAATAACATAATGAACGAGAGAAGAGTCCAACCCAGACTGTCCGGCATGGTGAACGCTACTTaGAAGGGCCCACGCCGGCCC | + |
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Preference number: 4 (lower is better) Translates to: RAVNNIMNERRVQPRLSGMVNAT*KGPRRP Trigger: GGGCCGGCGTGGGCCCTTGCAAGTAGCGTTCACCAT...GCCGGACAGTCTGGGTTGGACTCTTCTCTCGTTCATTATGTTATTGACGGCCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021078.3 |
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| CDS-3UTR CCA 90 bp | AGGACGGGTAGGGTCAGTCTGTATCTCCATCCATCCCTAGCTTCAGGTTCCCTCTGTGTAGAAGCCAGCTaGGCCACTGCCGACCACACA | + |
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Preference number: 4 (lower is better) Translates to: RTGRVSLYLHPSLASGSLCVEAS*ATADHT Trigger: TGTGTGGTCGGCAGTGGCCCAGCTGGCTTCTACACA...GAGGGAACCTGAAGCTAGGGATGGATGGAGATACAGACTGACCCTACCCGTCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021078.3 |
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| CDS-3UTR CCA 90 bp | CCTCCAAGGTCCATCAGAAAGGAAGCAGGACGGGTAGGGTCAGTCTGTATCTCCGTCACAGCTCAGATCTaGCGCCAGCTCCTGGTTCTC | + |
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Preference number: 4 (lower is better) Translates to: PPRSIRKEAGRVGSVCISVTAQI*RQLLVL Trigger: GAGAACCAGGAGCTGGCGCCAGATCTGAGCTGTGAC...GGAGATACAGACTGACCCTACCCGTCCTGCTTCCTTTCTGATGGACCTTGGAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021078.3 |
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| CDS-3UTR CCA 90 bp | CGTTCTAGAGGCCCTCCAAGGTCCATCAGAAAGGAAGCAGGACGGGTAGGGTCAAATGGGCCGGGTTCCTaGCAACTGAATCATCTCCCG | + |
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Preference number: 4 (lower is better) Translates to: RSRGPPRSIRKEAGRVGSNGPGS*QLNHLP Trigger: CGGGAGATGATTCAGTTGCCAGGAACCCGGCCCATT...TGACCCTACCCGTCCTGCTTCCTTTCTGATGGACCTTGGAGGGCCTCTAGAACG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021078.3 |
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| CDS-3UTR CCA 90 bp | CGTTCTAGAGGCCCTCCAAGGTCCATCAGAAAGGAAGCAGGACGGGTAGGGTCACCGAAGGATCCAAAATaGGCCGGGTTCCTGGCAACT | + |
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Preference number: 4 (lower is better) Translates to: RSRGPPRSIRKEAGRVGSPKDPK*AGFLAT Trigger: AGTTGCCAGGAACCCGGCCCATTTTGGATCCTTCGG...TGACCCTACCCGTCCTGCTTCCTTTCTGATGGACCTTGGAGGGCCTCTAGAACG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021078.3 |
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| CDS-3UTR CCA 90 bp | CCCTCCAAGGTCCATCAGAAAGGAAGCAGGACGGGTAGGGTCAGTCTGTATCTCCTCCTGGCTTCTCCGTaGCTGTCCGAAGCAGCAGTT | + |
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Preference number: 4 (lower is better) Translates to: PSKVHQKGSRTGRVSLYLLLASP*LSEAAV Trigger: AACTGCTGCTTCGGACAGCCACGGAGAAGCCAGGAG...GAGATACAGACTGACCCTACCCGTCCTGCTTCCTTTCTGATGGACCTTGGAGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021078.3 |
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| CDS-3UTR GCA 90 bp | CTGTATCTCCATCCATCCCTAGCTTCAGGTTCCCTCCTTGGCCTCAAGCCACACTTCAGGATGGTCAGGTaGCACACCAAAGCGCACCAG | + |
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Preference number: 4 (lower is better) Translates to: LYLHPSLASGSLLGLKPHFRMVR*HTKAHQ Trigger: CTGGTGCGCTTTGGTGTGGCACCTGACCATCCTGAA...GTGTGGCTTGAGGCCAAGGAGGGAACCTGAAGCTAGGGATGGATGGAGATACAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021078.3 |
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| CDS-3UTR CCA 90 bp | AGGGCCGTCAATAACATAATGAACGAGAGAAGAGTCCAACCCAGACTGTCCGGCGCGCACCAGGCCGAATaGCACGAGCTGCTTCTCGTA | + |
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Preference number: 4 (lower is better) Translates to: RAVNNIMNERRVQPRLSGAHQAE*HELLLV Trigger: TACGAGAAGCAGCTCGTGCCATTCGGCCTGGTGCGC...GCCGGACAGTCTGGGTTGGACTCTTCTCTCGTTCATTATGTTATTGACGGCCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021078.3 |
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| CDS-3UTR TCA 90 bp | CGTTCTAGAGGCCCTCCAAGGTCCATCAGAAAGGAAGCAGGACGGGTAGGGTCACCAATGCAGCCTCTGTaGTGTCTGTTTTCTCCAGGT | + |
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Preference number: 4 (lower is better) Translates to: RSRGPPRSIRKEAGRVGSPMQPL*CLFSPG Trigger: ACCTGGAGAAAACAGACATCACAGAGGCTGCATTGG...TGACCCTACCCGTCCTGCTTCCTTTCTGATGGACCTTGGAGGGCCTCTAGAACG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021078.3 |
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| CDS-3UTR GCA 90 bp | TCCATCAGAAAGGAAGCAGGACGGGTAGGGTCAGTCTGTATCTCCATCCATCCCTCTTCACCCAGCCACTaGAGTAGAGGCCTGGGACAT | + |
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Preference number: 4 (lower is better) Translates to: SIRKEAGRVGSVCISIHPSSPSH*SRGLGH Trigger: ATGTCCCAGGCCTCTACTGCAGTGGCTGGGTGAAGA...GGGATGGATGGAGATACAGACTGACCCTACCCGTCCTGCTTCCTTTCTGATGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021078.3 |
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| CDS-3UTR CCA 90 bp | ACGGGTAGGGTCAGTCTGTATCTCCATCCATCCCTAGCTTCAGGTTCCCTCCTTTGTGTGGAGAACTTCTaGCAGAAGCCTGGGGTCGGA | + |
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Preference number: 4 (lower is better) Translates to: TGRVSLYLHPSLASGSLLCVENF*QKPGVG Trigger: TCCGACCCCAGGCTTCTGCCAGAAGTTCTCCACACA...AAGGAGGGAACCTGAAGCTAGGGATGGATGGAGATACAGACTGACCCTACCCGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021078.3 |
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| CDS-3UTR TCA 90 bp | GGCACATCTGTTTTATTTCCACTGTGTTCCGTTCTAGAGGCCCTCCAAGGTCCACGGGTTCCTGGCAACTaGATCATCTCCCGAAGCTCC | + |
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Preference number: 4 (lower is better) Translates to: GTSVLFPLCSVLEALQGPRVPGN*IISRSS Trigger: GGAGCTTCGGGAGATGATTCAGTTGCCAGGAACCCG...TGGACCTTGGAGGGCCTCTAGAACGGAACACAGTGGAAATAAAACAGATGTGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021078.3 |
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| CDS-3UTR CCA 90 bp | GGCACATCTGTTTTATTTCCACTGTGTTCCGTTCTAGAGGCCCTCCAAGGTCCAACCACCACATTGCCCTaGAAGGCACAGCGGTCTGAG | + |
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Preference number: 4 (lower is better) Translates to: GTSVLFPLCSVLEALQGPTTTLP*KAQRSE Trigger: CTCAGACCGCTGTGCCTTCCAGGGCAATGTGGTGGT...TGGACCTTGGAGGGCCTCTAGAACGGAACACAGTGGAAATAAAACAGATGTGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021078.3 |
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| CDS-3UTR TCA 90 bp | GGCACATCTGTTTTATTTCCACTGTGTTCCGTTCTAGAGGCCCTCCAAGGTCCACCTCTGTGTTGGGGATaGCTCCAAGCTTGGGGTCAA | + |
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Preference number: 4 (lower is better) Translates to: GTSVLFPLCSVLEALQGPPLCWG*LQAWGQ Trigger: TTGACCCCAAGCTTGGAGTCATCCCCAACACAGAGG...TGGACCTTGGAGGGCCTCTAGAACGGAACACAGTGGAAATAAAACAGATGTGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000021078.3 |
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| CDS-3UTR CCA 90 bp | CATAATGAACGAGAGAAGAGTCCAACCCAGACTGTCCGGCTCTTGTCTTGCACGACGTGGGCATGGGTGTaGTGCTTTAACAAGTGTTGG | + |
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Preference number: 4 (lower is better) Translates to: HNEREKSPTQTVRLLSCTTWAWV*CFNKCW Trigger: CCAACACTTGTTAAAGCACCACACCCATGCCCACGT...CGTGCAAGACAAGAGCCGGACAGTCTGGGTTGGACTCTTCTCTCGTTCATTATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021078.3 |
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| CDS-3UTR CCA 90 bp | AGGACGGGTAGGGTCAGTCTGTATCTCCATCCATCCCTAGCTTCAGGTTCCCTCTCCTTAATTCTGTCCTaGAGGCCCAAGAAATCCGAA | + |
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Preference number: 4 (lower is better) Translates to: RTGRVSLYLHPSLASGSLSLILS*RPKKSE Trigger: TTCGGATTTCTTGGGCCTCCAGGACAGAATTAAGGA...GAGGGAACCTGAAGCTAGGGATGGATGGAGATACAGACTGACCCTACCCGTCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021078.3 |
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| CDS-3UTR GCA 90 bp | GGCACATCTGTTTTATTTCCACTGTGTTCCGTTCTAGAGGCCCTCCAAGGTCCATCTTATACCCAACGCTaGTCAGCAGCAGTCCACAAG | + |
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Preference number: 4 (lower is better) Translates to: GTSVLFPLCSVLEALQGPSYTQR*SAAVHK Trigger: CTTGTGGACTGCTGCTGAGCAGCGTTGGGTATAAGA...TGGACCTTGGAGGGCCTCTAGAACGGAACACAGTGGAAATAAAACAGATGTGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021078.3 |
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| CDS CCA 90 bp | GGGCTTCGGAAAAAGCGGAGACCCCAGGCCCGGGAGGCCAGTGCCTaGCGGGCAGCCTCTTCCACTCCTGGCTTCTCCGTGGCTGTCCGA | + |
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Preference number: 5 (lower is better) Translates to: GLRKKRRPQAREASA*RAASSTPGFSVAVR Trigger: TCGGACAGCCACGGAGAAGCCAGGAGTGGAAGAGGCTGCCCGCCAGGCACTGGCCTCCCGGGCCTGGGGTCTCCGCTTTTTCCGAAGCCC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021078.3 |
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| CDS CCA 90 bp | CCTGTGTGGAGAACTTCTGGCAGAAGCCTGGGGTCGGAGTGCTCCTaGAGGGAGACGGCCGAAGCCCAGACCACGCGGACCAGCGCCACC | + |
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Preference number: 5 (lower is better) Translates to: PVWRTSGRSLGSECS*RETAEAQTTRTSAT Trigger: GGTGGCGCTGGTCCGCGTGGTCTGGGCTTCGGCCGTCTCCCTCCAGGAGCACTCCGACCCCAGGCTTCTGCCAGAAGTTCTCCACACAGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021078.3 |
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| CDS CCA 90 bp | AGGCCAGTGCCTGGCGGGCAGCCTCTTCCACTCCTGGCTTCTCCGTaGCTGTCCGAAGCAGCAGTTCTGTTAGCCGCCTCCTTGGACGGG | + |
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Preference number: 5 (lower is better) Translates to: RPVPGGQPLPLLASP*LSEAAVLLAASLDG Trigger: CCCGTCCAAGGAGGCGGCTAACAGAACTGCTGCTTCGGACAGCCACGGAGAAGCCAGGAGTGGAAGAGGCTGCCCGCCAGGCACTGGCCT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021078.3 |
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| CDS GCA 90 bp | CCACAGCATGGTAGGCTTCCCGAAGCTCTGGAACCGACACGTCCCTaGCCACCACCACATTGCCCTGGAAGGCACAGCGGTCTGAGCGGG | + |
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Preference number: 5 (lower is better) Translates to: PQHGRLPEALEPTRP*PPPHCPGRHSGLSG Trigger: CCCGCTCAGACCGCTGTGCCTTCCAGGGCAATGTGGTGGTGGGCAGGGACGTGTCGGTTCCAGAGCTTCGGGAAGCCTACCATGCTGTGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021078.3 |
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| CDS GCA 90 bp | CAAAGGGCACGCTGGGGTCGATGGGGCGGCTCTTATACCCAACGCTaGTCAGCAGCAGTCCACAAGGGAGGTCCTCCACGTCTCCTGTGG | + |
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Preference number: 5 (lower is better) Translates to: QRARWGRWGGSYTQR*SAAVHKGGPPRLLW Trigger: CCACAGGAGACGTGGAGGACCTCCCTTGTGGACTGCTGCTGAGCAGCGTTGGGTATAAGAGCCGCCCCATCGACCCCAGCGTGCCCTTTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021078.3 |
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| CDS TCA 90 bp | GCTTCTCCCAGTCTGAGAAAGACACTGGCCGGACTCCTCGATTGCTaGGCAGGGCTTGAATGGCCACATAGCCGGGTCTGGGGCCGGAGG | + |
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Preference number: 5 (lower is better) Translates to: ASPSLRKTLAGLLDC*AGLEWPHSRVWGRR Trigger: CCTCCGGCCCCAGACCCGGCTATGTGGCCATTCAAGCCCTGCTCAGCAATCGAGGAGTCCGGCCAGTGTCTTTCTCAGACTGGGAGAAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021078.3 |
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| CDS GCA 90 bp | AAGGGCCCACGCCGGCCCACTATCCACACAGTCTTCACCCGACTCTaGCTCAGGGCCCCCAATGCAGCCTCTGTGATGTCTGTTTTCTCC | + |
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Preference number: 5 (lower is better) Translates to: KGPRRPTIHTVFTRL*LRAPNAASVMSVFS Trigger: GGAGAAAACAGACATCACAGAGGCTGCATTGGGGGCCCTGAGGCAGAGTCGGGTGAAGACTGTGTGGATAGTGGGCCGGCGTGGGCCCTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021078.3 |
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| CDS-3UTR CAA 90 bp | GTTCCCTCCTTGGCCTCAAGCCACACTGGGAGGTCAGCTTGCAGAAGGCAGAGCGGGATGACTCCAAGCTaGGGGTCAAAGGGCACGCTG | + |
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Preference number: 5 (lower is better) Translates to: VPSLASSHTGRSACRRQSGMTPS*GSKGTL Trigger: CAGCGTGCCCTTTGACCCCAAGCTTGGAGTCATCCC...GCTCTGCCTTCTGCAAGCTGACCTCCCAGTGTGGCTTGAGGCCAAGGAGGGAAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021078.3 |
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| CDS CCA 90 bp | TGCTCCATAACTCAGCACCACAGCATGGTAGGCTTCCCGAAGCTCTaGAACCGACACGTCCCTGCCCACCACCACATTGCCCTGGAAGGC | + |
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Preference number: 5 (lower is better) Translates to: CSITQHHSMVGFPKL*NRHVPAHHHIALEG Trigger: GCCTTCCAGGGCAATGTGGTGGTGGGCAGGGACGTGTCGGTTCCAGAGCTTCGGGAAGCCTACCATGCTGTGGTGCTGAGTTATGGAGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021078.3 |
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| CDS-3UTR CAA 90 bp | CTAGCTTCAGGTTCCCTCCTTGGCCTCAAGCCACACTGGGAGGTCAGCTTGCAGACCCGGCCCTCTGTGTaGGGGATGACTCCAAGCTTG | + |
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Preference number: 5 (lower is better) Translates to: LASGSLLGLKPHWEVSLQTRPSV*GMTPSL Trigger: CAAGCTTGGAGTCATCCCCAACACAGAGGGCCGGGT...CTGCAAGCTGACCTCCCAGTGTGGCTTGAGGCCAAGGAGGGAACCTGAAGCTAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021078.3 |
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| CDS CCA 90 bp | TACTTCAGGATGGTCAGGTGCCACACCAAAGCGCACCAGGCCGAATaGCACGAGCTGCTTCTCGTAGATGTCTACGTGGGCATGGGTGTG | + |
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Preference number: 5 (lower is better) Translates to: YFRMVRCHTKAHQAE*HELLLVDVYVGMGV Trigger: CACACCCATGCCCACGTAGACATCTACGAGAAGCAGCTCGTGCCATTCGGCCTGGTGCGCTTTGGTGTGGCACCTGACCATCCTGAAGTA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021078.3 |
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| CDS-3UTR CAA 90 bp | CTAGCTTCAGGTTCCCTCCTTGGCCTCAAGCCACACTGGGAGGTCAGCTTGCAGAGGAATTCCCAGGGGTaGGTGGTCCTCTGCTCCATA | + |
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Preference number: 5 (lower is better) Translates to: LASGSLLGLKPHWEVSLQRNSQG*VVLCSI Trigger: TATGGAGCAGAGGACCACCAACCCCTGGGAATTCCT...CTGCAAGCTGACCTCCCAGTGTGGCTTGAGGCCAAGGAGGGAACCTGAAGCTAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021078.3 |
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| CDS-3UTR CAA 90 bp | AGGTTCCCTCCTTGGCCTCAAGCCACACTGGGAGGTCAGCTTGCAGAAGGCAGATTCTCGGGAAGTCCATaGTACCAGCCCACAAAGGCC | + |
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Preference number: 5 (lower is better) Translates to: RFPPWPQATLGGQLAEGRFSGSP*YQPTKA Trigger: GGCCTTTGTGGGCTGGTACAATGGACTTCCCGAGAA...TCTGCCTTCTGCAAGCTGACCTCCCAGTGTGGCTTGAGGCCAAGGAGGGAACCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021078.3 |
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| CDS-3UTR CAA 90 bp | TCCATCAGAAAGGAAGCAGGACGGGTAGGGTCAGTCTGTATCTCCATCCATCCCAATGGTGAACGCTACTaGCAAGGGCCCACGCCGGCC | + |
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Preference number: 5 (lower is better) Translates to: SIRKEAGRVGSVCISIHPNGERY*QGPTPA Trigger: GGCCGGCGTGGGCCCTTGCAAGTAGCGTTCACCATT...GGGATGGATGGAGATACAGACTGACCCTACCCGTCCTGCTTCCTTTCTGATGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021078.3 |
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| CDS-3UTR CAA 90 bp | GAACGAGAGAAGAGTCCAACCCAGACTGTCCGGCTCTTGTCTTGCACGGTAGGGCCACCAGCTTCTCCCTaGGTTTCCCAGTACCTTGGC | + |
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Preference number: 5 (lower is better) Translates to: EREKSPTQTVRLLSCTVGPPASP*VSQYLG Trigger: GCCAAGGTACTGGGAAACCAAGGGAGAAGCTGGTGG...CCCTACCGTGCAAGACAAGAGCCGGACAGTCTGGGTTGGACTCTTCTCTCGTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021078.3 |
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| CDS GCA 90 bp | GGTGCTTTAACAAGTGTTGGGCTGTGTAGAAGCCAGCTGGGCCACTaGCGACCACACAGATCTGAGGGGTCTTCTCCTGTGTGGAGAACT | + |
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Preference number: 5 (lower is better) Translates to: GALTSVGLCRSQLGH*RPHRSEGSSPVWRT Trigger: AGTTCTCCACACAGGAGAAGACCCCTCAGATCTGTGTGGTCGGCAGTGGCCCAGCTGGCTTCTACACAGCCCAACACTTGTTAAAGCACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021078.3 |
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| CDS CCA 90 bp | TCTGTTAGCCGCCTCCTTGGACGGGGGACATCCTTAATTCTGTCCTaGAGGCCCAAGAAATCCGAAGGATCCAAAATGGGCCGGGTTCCT | + |
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Preference number: 5 (lower is better) Translates to: SVSRLLGRGTSLILS*RPKKSEGSKMGRVP Trigger: AGGAACCCGGCCCATTTTGGATCCTTCGGATTTCTTGGGCCTCCAGGACAGAATTAAGGATGTCCCCCGTCCAAGGAGGCGGCTAACAGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021078.3 |
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| CDS CCA 90 bp | ATCTCTCTTCGATCCACCAGCTTCTCCCTTGGTTTCCCAGTACCTTaGCCTCGAGAGACTTCCTCAGCATCCAGCTTCTCCCAGTCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: ISLRSTSFSLGFPVP*PRETSSASSFSQSE Trigger: CTCAGACTGGGAGAAGCTGGATGCTGAGGAAGTCTCTCGAGGCCAAGGTACTGGGAAACCAAGGGAGAAGCTGGTGGATCGAAGAGAGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021078.3 |
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| CDS TCA 90 bp | CACGTCCCTGCCCACCACCACATTGCCCTGGAAGGCACAGCGGTCTaGGCGGGCTGTCTGTGTAAATGTGTTGATAACATTCTTTACTTC | + |
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Preference number: 5 (lower is better) Translates to: HVPAHHHIALEGTAV*AGCLCKCVDNILYF Trigger: GAAGTAAAGAATGTTATCAACACATTTACACAGACAGCCCGCTCAGACCGCTGTGCCTTCCAGGGCAATGTGGTGGTGGGCAGGGACGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021078.3 |
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| CDS CCA 90 bp | CTGGAGGCCCAAGAAATCCGAAGGATCCAAAATGGGCCGGGTTCCTaGCAACTGAATCATCTCCCGAAGCTCCTTAATGGTGAACGCTAC | + |
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Preference number: 5 (lower is better) Translates to: LEAQEIRRIQNGPGS*QLNHLPKLLNGERY Trigger: GTAGCGTTCACCATTAAGGAGCTTCGGGAGATGATTCAGTTGCCAGGAACCCGGCCCATTTTGGATCCTTCGGATTTCTTGGGCCTCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021078.3 |
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| CDS TCA 90 bp | CCCAAGAAATCCGAAGGATCCAAAATGGGCCGGGTTCCTGGCAACTaGATCATCTCCCGAAGCTCCTTAATGGTGAACGCTACTTGCAAG | + |
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Preference number: 5 (lower is better) Translates to: PKKSEGSKMGRVPGN*IISRSSLMVNATCK Trigger: CTTGCAAGTAGCGTTCACCATTAAGGAGCTTCGGGAGATGATTCAGTTGCCAGGAACCCGGCCCATTTTGGATCCTTCGGATTTCTTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021078.3 |
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| CDS GCA 90 bp | CTGTGTAAATGTGTTGATAACATTCTTTACTTCAGGATGGTCAGGTaGCACACCAAAGCGCACCAGGCCGAATGGCACGAGCTGCTTCTC | + |
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Preference number: 5 (lower is better) Translates to: LCKCVDNILYFRMVR*HTKAHQAEWHELLL Trigger: GAGAAGCAGCTCGTGCCATTCGGCCTGGTGCGCTTTGGTGTGGCACCTGACCATCCTGAAGTAAAGAATGTTATCAACACATTTACACAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021078.3 |
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| CDS CCA 72 bp | AGAACTTCTGGCAGAAGCCTGGGGTCGGAGTGCTCCTaGAGGGAGACGGCCGAAGCCCAGACCACGCGGACC | + |
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Preference number: 6 (lower is better) Translates to: RTSGRSLGSECS*RETAEAQTTRT Trigger: GGTCCGCGTGGTCTGGGCTTCGGCCGTCTCCCTCCAGGAGCACTCCGACCCCAGGCTTCTGCCAGAAGTTCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021078.3 |
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| CDS GCA 72 bp | GCTCTGGAACCGACACGTCCCTGCCCACCACCACATTaGCCTGGAAGGCACAGCGGTCTGAGCGGGCTGTCT | + |
|
Preference number: 6 (lower is better) Translates to: ALEPTRPCPPPH*PGRHSGLSGLS Trigger: AGACAGCCCGCTCAGACCGCTGTGCCTTCCAGGGCAATGTGGTGGTGGGCAGGGACGTGTCGGTTCCAGAGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021078.3 |
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| CDS CAA 72 bp | AGACACTGGCCGGACTCCTCGATTGCTGAGCAGGGCTaGAATGGCCACATAGCCGGGTCTGGGGCCGGAGGG | + |
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Preference number: 6 (lower is better) Translates to: RHWPDSSIAEQG*NGHIAGSGAGG Trigger: CCCTCCGGCCCCAGACCCGGCTATGTGGCCATTCAAGCCCTGCTCAGCAATCGAGGAGTCCGGCCAGTGTCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021078.3 |
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| CDS GCA 72 bp | GGTAGGCTTCCCGAAGCTCTGGAACCGACACGTCCCTaGCCACCACCACATTGCCCTGGAAGGCACAGCGGT | + |
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Preference number: 6 (lower is better) Translates to: GRLPEALEPTRP*PPPHCPGRHSG Trigger: ACCGCTGTGCCTTCCAGGGCAATGTGGTGGTGGGCAGGGACGTGTCGGTTCCAGAGCTTCGGGAAGCCTACC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021078.3 |
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| CDS GCA 72 bp | CGCTGGGGTCGATGGGGCGGCTCTTATACCCAACGCTaGTCAGCAGCAGTCCACAAGGGAGGTCCTCCACGT | + |
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Preference number: 6 (lower is better) Translates to: RWGRWGGSYTQR*SAAVHKGGPPR Trigger: ACGTGGAGGACCTCCCTTGTGGACTGCTGCTGAGCAGCGTTGGGTATAAGAGCCGCCCCATCGACCCCAGCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021078.3 |
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| CDS CAA 90 bp | TCACAGCTCAGATCTGGCGCCAGCTCCTGGTTCTCGGGAAGTCCATaGTACCAGCCCACAAAGGCCCGGGCTGAGACCACTCCAGGCAGC | + |
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Preference number: 6 (lower is better) Translates to: SQLRSGASSWFSGSP*YQPTKARAETTPGS Trigger: GCTGCCTGGAGTGGTCTCAGCCCGGGCCTTTGTGGGCTGGTACAATGGACTTCCCGAGAACCAGGAGCTGGCGCCAGATCTGAGCTGTGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021078.3 |
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| CDS GCA 72 bp | CGCCGGCCCACTATCCACACAGTCTTCACCCGACTCTaGCTCAGGGCCCCCAATGCAGCCTCTGTGATGTCT | + |
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Preference number: 6 (lower is better) Translates to: RRPTIHTVFTRL*LRAPNAASVMS Trigger: AGACATCACAGAGGCTGCATTGGGGGCCCTGAGGCAGAGTCGGGTGAAGACTGTGTGGATAGTGGGCCGGCG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021078.3 |
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| CDS CCA 72 bp | GGTCTTCTCCTGTGTGGAGAACTTCTGGCAGAAGCCTaGGGTCGGAGTGCTCCTGGAGGGAGACGGCCGAAG | + |
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Preference number: 6 (lower is better) Translates to: GLLLCGELLAEA*GRSAPGGRRPK Trigger: CTTCGGCCGTCTCCCTCCAGGAGCACTCCGACCCCAGGCTTCTGCCAGAAGTTCTCCACACAGGAGAAGACC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021078.3 |
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| CDS CCA 72 bp | AACTGCCAGGCGGATGCCTGCTACCCGTTGGCCATCTaGGGTAGGGAGCACCTGCTGGGGGCTTCGGAAAAA | + |
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Preference number: 6 (lower is better) Translates to: NCQADACYPLAI*GREHLLGASEK Trigger: TTTTTCCGAAGCCCCCAGCAGGTGCTCCCTACCCCAGATGGCCAACGGGTAGCAGGCATCCGCCTGGCAGTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021078.3 |
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| CDS CCA 72 bp | AGACTAGTAACTGCCAGGCGGATGCCTGCTACCCGTTaGCCATCTGGGGTAGGGAGCACCTGCTGGGGGCTT | + |
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Preference number: 6 (lower is better) Translates to: RLVTARRMPATR*PSGVGSTCWGL Trigger: AAGCCCCCAGCAGGTGCTCCCTACCCCAGATGGCCAACGGGTAGCAGGCATCCGCCTGGCAGTTACTAGTCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021078.3 |
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| CDS CAA 90 bp | GCTTCCCGAAGCTCTGGAACCGACACGTCCCTGCCCACCACCACATaGCCCTGGAAGGCACAGCGGTCTGAGCGGGCTGTCTGTGTAAAT | + |
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Preference number: 6 (lower is better) Translates to: ASRSSGTDTSLPTTT*PWKAQRSERAVCVN Trigger: ATTTACACAGACAGCCCGCTCAGACCGCTGTGCCTTCCAGGGCAATGTGGTGGTGGGCAGGGACGTGTCGGTTCCAGAGCTTCGGGAAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021078.3 |
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| CDS CCA 72 bp | ACTCAGCACCACAGCATGGTAGGCTTCCCGAAGCTCTaGAACCGACACGTCCCTGCCCACCACCACATTGCC | + |
|
Preference number: 6 (lower is better) Translates to: TQHHSMVGFPKL*NRHVPAHHHIA Trigger: GGCAATGTGGTGGTGGGCAGGGACGTGTCGGTTCCAGAGCTTCGGGAAGCCTACCATGCTGTGGTGCTGAGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021078.3 |
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| CDS CAA 72 bp | AGATCTGGCGCCAGCTCCTGGTTCTCGGGAAGTCCATaGTACCAGCCCACAAAGGCCCGGGCTGAGACCACT | + |
|
Preference number: 6 (lower is better) Translates to: RSGASSWFSGSP*YQPTKARAETT Trigger: AGTGGTCTCAGCCCGGGCCTTTGTGGGCTGGTACAATGGACTTCCCGAGAACCAGGAGCTGGCGCCAGATCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021078.3 |
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| CDS GCA 72 bp | CCCAATGCAGCCTCTGTGATGTCTGTTTTCTCCAGGTaGTCAGGTGGGGTCAGCAGGATCCGGGCCACATCC | + |
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Preference number: 6 (lower is better) Translates to: PNAASVMSVFSR*SGGVSRIRATS Trigger: GGATGTGGCCCGGATCCTGCTGACCCCACCTGAGCACCTGGAGAAAACAGACATCACAGAGGCTGCATTGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021078.3 |
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| CDS CCA 72 bp | ATGGTCAGGTGCCACACCAAAGCGCACCAGGCCGAATaGCACGAGCTGCTTCTCGTAGATGTCTACGTGGGC | + |
|
Preference number: 6 (lower is better) Translates to: MVRCHTKAHQAE*HELLLVDVYVG Trigger: GCCCACGTAGACATCTACGAGAAGCAGCTCGTGCCATTCGGCCTGGTGCGCTTTGGTGTGGCACCTGACCAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021078.3 |
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| CDS CAA 90 bp | GGCCCAGCAGCCGCAGCATCTCTCTTCGATCCACCAGCTTCTCCCTaGGTTTCCCAGTACCTTGGCCTCGAGAGACTTCCTCAGCATCCA | + |
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Preference number: 6 (lower is better) Translates to: GPAAAASLFDPPASP*VSQYLGLERLPQHP Trigger: TGGATGCTGAGGAAGTCTCTCGAGGCCAAGGTACTGGGAAACCAAGGGAGAAGCTGGTGGATCGAAGAGAGATGCTGCGGCTGCTGGGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021078.3 |
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| CDS TCA 72 bp | AGTCTGAGAAAGACACTGGCCGGACTCCTCGATTGCTaGGCAGGGCTTGAATGGCCACATAGCCGGGTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: SLRKTLAGLLDC*AGLEWPHSRVW Trigger: CCAGACCCGGCTATGTGGCCATTCAAGCCCTGCTCAGCAATCGAGGAGTCCGGCCAGTGTCTTTCTCAGACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021078.3 |
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| CDS GCA 72 bp | CTCCTCGCCAGGAATTCCCAGGGGTTGGTGGTCCTCTaGTCCATAACTCAGCACCACAGCATGGTAGGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: LLARNSQGLVVL*SITQHHSMVGF Trigger: GAAGCCTACCATGCTGTGGTGCTGAGTTATGGAGCAGAGGACCACCAACCCCTGGGAATTCCTGGCGAGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021078.3 |
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| CDS GCA 72 bp | CACAGTCTTCACCCGACTCTGCCTCAGGGCCCCCAATaGAGCCTCTGTGATGTCTGTTTTCTCCAGGTGCTC | + |
|
Preference number: 6 (lower is better) Translates to: HSLHPTLPQGPQ*SLCDVCFLQVL Trigger: GAGCACCTGGAGAAAACAGACATCACAGAGGCTGCATTGGGGGCCCTGAGGCAGAGTCGGGTGAAGACTGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021078.3 |
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| CDS CCA 72 bp | CGCCTCCTTGGACGGGGGACATCCTTAATTCTGTCCTaGAGGCCCAAGAAATCCGAAGGATCCAAAATGGGC | + |
|
Preference number: 6 (lower is better) Translates to: RLLGRGTSLILS*RPKKSEGSKMG Trigger: GCCCATTTTGGATCCTTCGGATTTCTTGGGCCTCCAGGACAGAATTAAGGATGTCCCCCGTCCAAGGAGGCG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021078.3 |
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| CDS CAA 72 bp | TCGATCCACCAGCTTCTCCCTTGGTTTCCCAGTACCTaGGCCTCGAGAGACTTCCTCAGCATCCAGCTTCTC | + |
|
Preference number: 6 (lower is better) Translates to: SIHQLLPWFPST*ASRDFLSIQLL Trigger: GAGAAGCTGGATGCTGAGGAAGTCTCTCGAGGCCAAGGTACTGGGAAACCAAGGGAGAAGCTGGTGGATCGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021078.3 |
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| CDS TCA 72 bp | GCCCACCACCACATTGCCCTGGAAGGCACAGCGGTCTaGGCGGGCTGTCTGTGTAAATGTGTTGATAACATT | + |
|
Preference number: 6 (lower is better) Translates to: AHHHIALEGTAV*AGCLCKCVDNI Trigger: AATGTTATCAACACATTTACACAGACAGCCCGCTCAGACCGCTGTGCCTTCCAGGGCAATGTGGTGGTGGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021078.3 |
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| CDS CCA 72 bp | TGTCCTGGAGGCCCAAGAAATCCGAAGGATCCAAAATaGGCCGGGTTCCTGGCAACTGAATCATCTCCCGAA | + |
|
Preference number: 6 (lower is better) Translates to: CPGGPRNPKDPK*AGFLATESSPE Trigger: TTCGGGAGATGATTCAGTTGCCAGGAACCCGGCCCATTTTGGATCCTTCGGATTTCTTGGGCCTCCAGGACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021078.3 |
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| CDS GCA 72 bp | TGTGTTGATAACATTCTTTACTTCAGGATGGTCAGGTaGCACACCAAAGCGCACCAGGCCGAATGGCACGAG | + |
|
Preference number: 6 (lower is better) Translates to: CVDNILYFRMVR*HTKAHQAEWHE Trigger: CTCGTGCCATTCGGCCTGGTGCGCTTTGGTGTGGCACCTGACCATCCTGAAGTAAAGAATGTTATCAACACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021078.3 |
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| CDS CCA 72 bp | CAAGAAATCCGAAGGATCCAAAATGGGCCGGGTTCCTaGCAACTGAATCATCTCCCGAAGCTCCTTAATGGT | + |
|
Preference number: 6 (lower is better) Translates to: QEIRRIQNGPGS*QLNHLPKLLNG Trigger: ACCATTAAGGAGCTTCGGGAGATGATTCAGTTGCCAGGAACCCGGCCCATTTTGGATCCTTCGGATTTCTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021078.3 |
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| CDS CAA 72 bp | GCACAGCGGTCTGAGCGGGCTGTCTGTGTAAATGTGTaGATAACATTCTTTACTTCAGGATGGTCAGGTGCC | + |
|
Preference number: 6 (lower is better) Translates to: AQRSERAVCVNV*ITFFTSGWSGA Trigger: GGCACCTGACCATCCTGAAGTAAAGAATGTTATCAACACATTTACACAGACAGCCCGCTCAGACCGCTGTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021078.3 |
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