Pregenerated sensors for FDXACB1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000037845Ensembl transcript IDs: ENSMUST00000042391.13, ENSMUST00000176145.2, ENSMUST00000176335.2
Found 89 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ACAGGAAGATGCTTCAAGGAACCTCCTGTTCAGCTTTCCTGGAAGTaGTTCTGGTTCTGTAAAGTAAAACCACCGGTCCTCCAGTCTGAC | + |
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Preference number: 1 (lower is better) Translates to: TGRCFKEPPVQLSWK*FWFCKVKPPVLQSD Trigger: GTCAGACTGGAGGACCGGTGGTTTTACTTTACAGAACCAGAAGCACTTCCAGGAAAGCTGAACAGGAGGTTCCTTGAAGCATCTTCCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176145.2 |
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| 3UTR CCA 90 bp | AGATGCTTCAAGGAACCTCCTGTTCAGCTTTCCTGGAAGTGCTTCTaGTTCTGTAAAGTAAAACCACCGGTCCTCCAGTCTGACTCTGAA | + |
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Preference number: 1 (lower is better) Translates to: RCFKEPPVQLSWKCF*FCKVKPPVLQSDSE Trigger: TTCAGAGTCAGACTGGAGGACCGGTGGTTTTACTTTACAGAACCAGAAGCACTTCCAGGAAAGCTGAACAGGAGGTTCCTTGAAGCATCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176145.2 |
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| 3UTR-3UTR GCA 90 bp | CTATCCTGGCTCCTATACCCAGTGCACTTGTATCCTGGCACAGCCTCACAGCTAGAACCCTCCCAGGGCTaGCATGGCAACTACTTGCCA | + |
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Preference number: 2 (lower is better) Translates to: LSWLLYPVHLYPGTASQLEPSQG*HGNYLP Trigger: TGGCAAGTAGTTGCCATGGCAGCCCTGGGAGGGTTC...TAGCTGTGAGGCTGTGCCAGGATACAAGTGCACTGGGTATAGGAGCCAGGATAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176145.2 |
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| 3UTR-3UTR CCA 90 bp | CCAGAAGCTGGAAAGAACCCAGATGTCCCTCAACAGAGGAATGGATACAGAAAACAGAGACTGAAGGAATaGCCATCCAGAGACTGCCCC | + |
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Preference number: 2 (lower is better) Translates to: PEAGKNPDVPQQRNGYRKQRLKE*PSRDCP Trigger: GGGGCAGTCTCTGGATGGCCATTCCTTCAGTCTCTG...TTTTCTGTATCCATTCCTCTGTTGAGGGACATCTGGGTTCTTTCCAGCTTCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042391.13 |
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| 3UTR-3UTR CCA 90 bp | GGTGAAGATATAGGTCAAAGCACCTTCTATGTGAAAGGGCCTATCCTGGCTCCTAGTGCACTTGTATCCTaGCACAGCCTCACAGCTAAA | + |
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Preference number: 2 (lower is better) Translates to: GEDIGQSTFYVKGPILAPSALVS*HSLTAK Trigger: TTTAGCTGTGAGGCTGTGCCAGGATACAAGTGCACT...AGGAGCCAGGATAGGCCCTTTCACATAGAAGGTGCTTTGACCTATATCTTCACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176145.2 |
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| 3UTR CAA 90 bp | TTCATGAAATTCTTAGGCAAATGGATGGATCTGAAGGATATTATCTaGAGTGAGGTAACCCAATCACAAAAGAACACACATGATATGCAC | + |
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Preference number: 2 (lower is better) Translates to: FMKFLGKWMDLKDII*SEVTQSQKNTHDMH Trigger: GTGCATATCATGTGTGTTCTTTTGTGATTGGGTTACCTCACTCAAGATAATATCCTTCAGATCCATCCATTTGCCTAAGAATTTCATGAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042391.13 |
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| 3UTR TCA 72 bp | ATGGCAACTACTTGCCAACTGTTGTGCCACTCTCTCTaGGGCTTGTCAGCAGGCGTTCCACCTTGTCCTCTG | + |
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Preference number: 3 (lower is better) Translates to: MATTCQLLCHSL*GLSAGVPPCPL Trigger: CAGAGGACAAGGTGGAACGCCTGCTGACAAGCCTCAGAGAGAGTGGCACAACAGTTGGCAAGTAGTTGCCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176145.2 |
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| 3UTR TCA 72 bp | CACCGGTCCTCCAGTCTGACTCTGAAAGTTCTGGGCTaGCAGCTCTCAAAGGGTAAGCTCTGGGTGAAGATA | + |
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Preference number: 3 (lower is better) Translates to: HRSSSLTLKVLG*QLSKGKLWVKI Trigger: TATCTTCACCCAGAGCTTACCCTTTGAGAGCTGTCAGCCCAGAACTTTCAGAGTCAGACTGGAGGACCGGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176145.2 |
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| 3UTR CCA 72 bp | CCTATCCTGGCTCCTATACCCAGTGCACTTGTATCCTaGCACAGCCTCACAGCTAAAGGGACACACATCACT | + |
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Preference number: 3 (lower is better) Translates to: PILAPIPSALVS*HSLTAKGTHIT Trigger: AGTGATGTGTGTCCCTTTAGCTGTGAGGCTGTGCCAGGATACAAGTGCACTGGGTATAGGAGCCAGGATAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176145.2 |
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| 3UTR-3UTR CAA 90 bp | TACCCAGTGCACTTGTATCCTGGCACAGCCTCACAGCTAAAGGGACACACATCATGCCATGGCAACTACTaGCCAACTGTTGTGCCACTC | + |
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Preference number: 3 (lower is better) Translates to: YPVHLYPGTASQLKGHTSCHGNY*PTVVPL Trigger: GAGTGGCACAACAGTTGGCAAGTAGTTGCCATGGCA...TGATGTGTGTCCCTTTAGCTGTGAGGCTGTGCCAGGATACAAGTGCACTGGGTA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176145.2 |
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| 3UTR TCA 72 bp | CCACTACCTCCACGGCCAGCCAGCCTATGCATTAAATaGTGTTCACAGGCATCTTTAGGGGCCATCAACACT | + |
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Preference number: 3 (lower is better) Translates to: PLPPRPASLCIK*CSQASLGAINT Trigger: AGTGTTGATGGCCCCTAAAGATGCCTGTGAACATCATTTAATGCATAGGCTGGCTGGCCGTGGAGGTAGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042391.13 |
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| 3UTR CCA 72 bp | AAGGAACCTCCTGTTCAGCTTTCCTGGAAGTGCTTCTaGTTCTGTAAAGTAAAACCACCGGTCCTCCAGTCT | + |
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Preference number: 3 (lower is better) Translates to: KEPPVQLSWKCF*FCKVKPPVLQS Trigger: AGACTGGAGGACCGGTGGTTTTACTTTACAGAACCAGAAGCACTTCCAGGAAAGCTGAACAGGAGGTTCCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176145.2 |
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| 3UTR TCA 72 bp | TTCTGGGCTGACAGCTCTCAAAGGGTAAGCTCTGGGTaGAGATATAGGTCAAAGCACCTTCTATGTGAAAGG | + |
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Preference number: 3 (lower is better) Translates to: FWADSSQRVSSG*RYRSKHLLCER Trigger: CCTTTCACATAGAAGGTGCTTTGACCTATATCTTCACCCAGAGCTTACCCTTTGAGAGCTGTCAGCCCAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176145.2 |
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| 3UTR-3UTR CAA 90 bp | ACAAAACACAAGAAACTCAAGAAGAAGGAAGACCAAACTGTGGATACTTCAGTCGGAACAAGTTTCAAGTaGTTCTTTTTCACCCACATA | + |
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Preference number: 3 (lower is better) Translates to: TKHKKLKKKEDQTVDTSVGTSFK*FFFTHI Trigger: TATGTGGGTGAAAAAGAACAACTTGAAACTTGTTCC...GACTGAAGTATCCACAGTTTGGTCTTCCTTCTTCTTGAGTTTCTTGTGTTTTGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042391.13 |
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| CDS-3UTR GCA 90 bp | CACCACCACTACCTCCACGGCCAGCCAGCCTATGCATTAAATGATGTTCACAGGCCTCCTGAGCACCTTTaGAGCCATCTCTCACAGGAC | + |
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Preference number: 4 (lower is better) Translates to: HHHYLHGQPAYALNDVHRPPEHL*SHLSQD Trigger: GTCCTGTGAGAGATGGCTGCAAAGGTGCTCAGGAGG...CCTGTGAACATCATTTAATGCATAGGCTGGCTGGCCGTGGAGGTAGTGGTGGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042391.13 |
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| CDS-3UTR CCA 90 bp | TATAGAGCAGAGACTGAAGGAATGGCCATCCAGAGACTGCCCCACCTGGTTTGGGGCTGGGAGGAAGTCTaGGGAATGGATGACAGCTTC | + |
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Preference number: 4 (lower is better) Translates to: YRAETEGMAIQRLPHLVWGWEEV*GMDDSF Trigger: GAAGCTGTCATCCATTCCCCAGACTTCCTCCCAGCC...CCAAACCAGGTGGGGCAGTCTCTGGATGGCCATTCCTTCAGTCTCTGCTCTATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042391.13 |
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| CDS-3UTR CCA 90 bp | CACCACCACTACCTCCACGGCCAGCCAGCCTATGCATTAAATGATGTTCACAGGGACATGCAGAGAGGCTaGGAGGAAGTCTGGGGAATG | + |
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Preference number: 4 (lower is better) Translates to: HHHYLHGQPAYALNDVHRDMQRG*EEVWGM Trigger: CATTCCCCAGACTTCCTCCCAGCCTCTCTGCATGTC...CCTGTGAACATCATTTAATGCATAGGCTGGCTGGCCGTGGAGGTAGTGGTGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042391.13 |
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| CDS-3UTR GCA 90 bp | AACCCTCCCAGGGCTGCCATGGCAACTACTTGCCAACTGTTGTGCCACTCTCTCCACATGGACTTCTCCTaGCTCTGGAAAAACTTGGCA | + |
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Preference number: 4 (lower is better) Translates to: NPPRAAMATTCQLLCHSLHMDFS*LWKNLA Trigger: TGCCAAGTTTTTCCAGAGGCAGGAGAAGTCCATGTG...GAGAGAGTGGCACAACAGTTGGCAAGTAGTTGCCATGGCAGCCCTGGGAGGGTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000176145.2 |
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| CDS-3UTR TCA 90 bp | AGCAGCCTTATTTATAATAGCCAGAAGCTGGAAAGAACCCAGATGTCCCTCAACGACACGACAGTGTCCTaGGACACCGCTCGGGCCACA | + |
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Preference number: 4 (lower is better) Translates to: SSLIYNSQKLERTQMSLNDTTVS*DTARAT Trigger: TGTGGCCCGAGCGGTGTCTCAGGACACTGTCGTGTC...GTTGAGGGACATCTGGGTTCTTTCCAGCTTCTGGCTATTATAAATAAGGCTGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042391.13 |
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| CDS-3UTR TCA 90 bp | TATAGAGCAGAGACTGAAGGAATGGCCATCCAGAGACTGCCCCACCTGGTTTGGCGAGTCTCTGGATGCTaGAAACGATCACGGTACTGT | + |
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Preference number: 4 (lower is better) Translates to: YRAETEGMAIQRLPHLVWRVSGC*KRSRYC Trigger: ACAGTACCGTGATCGTTTTCAGCATCCAGAGACTCG...CCAAACCAGGTGGGGCAGTCTCTGGATGGCCATTCCTTCAGTCTCTGCTCTATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042391.13 |
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| CDS-3UTR GCA 90 bp | TATAGAGCAGAGACTGAAGGAATGGCCATCCAGAGACTGCCCCACCTGGTTTGGTTCCACCTTGTCCTCTaGACAGTGTCACATGGACTT | + |
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Preference number: 4 (lower is better) Translates to: YRAETEGMAIQRLPHLVWFHLVL*TVSHGL Trigger: AAGTCCATGTGACACTGTGCAGAGGACAAGGTGGAA...CCAAACCAGGTGGGGCAGTCTCTGGATGGCCATTCCTTCAGTCTCTGCTCTATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042391.13 |
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| CDS-3UTR TCA 90 bp | CACCACCACTACCTCCACGGCCAGCCAGCCTATGCATTAAATGATGTTCACAGGATGGTTCTGATAGGATaGCAGGAAGATGCTTCAAGG | + |
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Preference number: 4 (lower is better) Translates to: HHHYLHGQPAYALNDVHRMVLIG*QEDASR Trigger: CCTTGAAGCATCTTCCTGTCATCCTATCAGAACCAT...CCTGTGAACATCATTTAATGCATAGGCTGGCTGGCCGTGGAGGTAGTGGTGGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042391.13 |
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| CDS-3UTR CCA 90 bp | CCAGAAGCTGGAAAGAACCCAGATGTCCCTCAACAGAGGAATGGATACAGAAAATGCTGCTGCCAGCTGTaGGGTGAGAGCCTTATCACA | + |
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Preference number: 4 (lower is better) Translates to: PEAGKNPDVPQQRNGYRKCCCQL*GESLIT Trigger: TGTGATAAGGCTCTCACCCCACAGCTGGCAGCAGCA...TTTTCTGTATCCATTCCTCTGTTGAGGGACATCTGGGTTCTTTCCAGCTTCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042391.13 |
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| CDS-3UTR CCA 90 bp | TATGTGAAAGGGCCTATCCTGGCTCCTATACCCAGTGCACTTGTATCCTGGCACGCCTCTGGAAAAACTTaGCAAGCAGTTCCCTGTTCT | + |
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Preference number: 4 (lower is better) Translates to: YVKGPILAPIPSALVSWHASGKT*QAVPCS Trigger: AGAACAGGGAACTGCTTGCCAAGTTTTTCCAGAGGC...GTGCCAGGATACAAGTGCACTGGGTATAGGAGCCAGGATAGGCCCTTTCACATA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000176145.2 |
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| CDS-3UTR CCA 90 bp | TACCCAGTGCACTTGTATCCTGGCACAGCCTCACAGCTAAAGGGACACACATCAGACTTCTCCTGCCTCTaGAAAAACTTGGCAAGCAGT | + |
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Preference number: 4 (lower is better) Translates to: YPVHLYPGTASQLKGHTSDFSCL*KNLASS Trigger: ACTGCTTGCCAAGTTTTTCCAGAGGCAGGAGAAGTC...TGATGTGTGTCCCTTTAGCTGTGAGGCTGTGCCAGGATACAAGTGCACTGGGTA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000176145.2 |
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| CDS-3UTR TCA 90 bp | AGCCAGAAGCTGGAAAGAACCCAGATGTCCCTCAACAGAGGAATGGATACAGAAAAAGCACCTTCTATGTaGAAGGGCCTATCCTGGCTC | + |
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Preference number: 4 (lower is better) Translates to: SQKLERTQMSLNRGMDTEKAPSM*KGLSWL Trigger: GAGCCAGGATAGGCCCTTTCACATAGAAGGTGCTTT...TTCTGTATCCATTCCTCTGTTGAGGGACATCTGGGTTCTTTCCAGCTTCTGGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042391.13 |
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| CDS-3UTR TCA 90 bp | AAACTGTGGATACTTCAGTCCTTCTTAGAAGGGGGAACAAAATACCCATGGGAGGAAAGACAGGTCCACTaGGGACATGCAGAGAGGCTG | + |
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Preference number: 4 (lower is better) Translates to: KLWILQSFLEGGTKYPWEERQVH*GHAERL Trigger: CAGCCTCTCTGCATGTCCTCAGTGGACCTGTCTTTC...CTCCCATGGGTATTTTGTTCCCCCTTCTAAGAAGGACTGAAGTATCCACAGTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042391.13 |
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| CDS-3UTR GCA 90 bp | AAGACCAAACTGTGGATACTTCAGTCCTTCTTAGAAGGGGGAACAAAATACCCAGAACTGGGACTGCATTaGTGCTGCCAGCTGTGGGGT | + |
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Preference number: 4 (lower is better) Translates to: KTKLWILQSFLEGGTKYPELGLH*CCQLWG Trigger: ACCCCACAGCTGGCAGCAGCAATGCAGTCCCAGTTC...TGGGTATTTTGTTCCCCCTTCTAAGAAGGACTGAAGTATCCACAGTTTGGTCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000042391.13 |
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| CDS-3UTR CCA 90 bp | AAGACCAAACTGTGGATACTTCAGTCCTTCTTAGAAGGGGGAACAAAATACCCACTGGTAGGAAGACACTaGGGCCTCCCCGTGACAACA | + |
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Preference number: 4 (lower is better) Translates to: KTKLWILQSFLEGGTKYPLVGRH*GLPVTT Trigger: TGTTGTCACGGGGAGGCCCCAGTGTCTTCCTACCAG...TGGGTATTTTGTTCCCCCTTCTAAGAAGGACTGAAGTATCCACAGTTTGGTCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000042391.13 |
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| CDS-3UTR TCA 90 bp | AAGACCAAACTGTGGATACTTCAGTCCTTCTTAGAAGGGGGAACAAAATACCCACCACAGATTCCCTCCTaGGCACCTTTGCAGCCATCT | + |
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Preference number: 4 (lower is better) Translates to: KTKLWILQSFLEGGTKYPPQIPS*APLQPS Trigger: AGATGGCTGCAAAGGTGCTCAGGAGGGAATCTGTGG...TGGGTATTTTGTTCCCCCTTCTAAGAAGGACTGAAGTATCCACAGTTTGGTCTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042391.13 |
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| CDS-3UTR GCA 90 bp | AAGGAAGACCAAACTGTGGATACTTCAGTCCTTCTTAGAAGGGGGAACAAAATAGAACCCTCCCAGGGCTaGCATGGCAACTACTTGCCA | + |
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Preference number: 4 (lower is better) Translates to: KEDQTVDTSVLLRRGNKIEPSQG*HGNYLP Trigger: TGGCAAGTAGTTGCCATGGCAGCCCTGGGAGGGTTC...TATTTTGTTCCCCCTTCTAAGAAGGACTGAAGTATCCACAGTTTGGTCTTCCTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042391.13 |
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| CDS-3UTR GCA 90 bp | GTGGATAGTAGCCCAAAGTTCAGAATACCCAAGATACAATTCACAAAACACAAGGGACTGCATTGCTGCTaGCAGCTGTGGGGTGAGAGC | + |
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Preference number: 4 (lower is better) Translates to: VDSSPKFRIPKIQFTKHKGLHCC*QLWGES Trigger: GCTCTCACCCCACAGCTGGCAGCAGCAATGCAGTCC...CTTGTGTTTTGTGAATTGTATCTTGGGTATTCTGAACTTTGGGCTACTATCCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042391.13 |
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| CDS-3UTR CCA 90 bp | GGTGAAGATATAGGTCAAAGCACCTTCTATGTGAAAGGGCCTATCCTGGCTCCTAAGGCATGTGACAGCTaGGTACAGTCCACACCAAAA | + |
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Preference number: 4 (lower is better) Translates to: GEDIGQSTFYVKGPILAPKACDS*VQSTPK Trigger: TTTTGGTGTGGACTGTACCCAGCTGTCACATGCCTT...AGGAGCCAGGATAGGCCCTTTCACATAGAAGGTGCTTTGACCTATATCTTCACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176145.2 |
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| CDS-3UTR TCA 90 bp | AGCCAGAAGCTGGAAAGAACCCAGATGTCCCTCAACAGAGGAATGGATACAGAAAGTCTGGGGAATGGATaGCAGCTTCAACATGAACAA | + |
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Preference number: 4 (lower is better) Translates to: SQKLERTQMSLNRGMDTESLGNG*QLQHEQ Trigger: TTGTTCATGTTGAAGCTGTCATCCATTCCCCAGACT...TTCTGTATCCATTCCTCTGTTGAGGGACATCTGGGTTCTTTCCAGCTTCTGGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042391.13 |
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| CDS-3UTR GCA 90 bp | AGCAGCCTTATTTATAATAGCCAGAAGCTGGAAAGAACCCAGATGTCCCTCAACGCCATGGCAACTACTTaGCAACTGTTGTGCCACTCT | + |
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Preference number: 4 (lower is better) Translates to: SSLIYNSQKLERTQMSLNAMATT*QLLCHS Trigger: AGAGTGGCACAACAGTTGGCAAGTAGTTGCCATGGC...GTTGAGGGACATCTGGGTTCTTTCCAGCTTCTGGCTATTATAAATAAGGCTGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042391.13 |
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| CDS-3UTR TCA 90 bp | TATGTGAAAGGGCCTATCCTGGCTCCTATACCCAGTGCACTTGTATCCTGGCACCACAGTGCGGGAAGTTaGAATAAATTCGATCAAAAT | + |
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Preference number: 4 (lower is better) Translates to: YVKGPILAPIPSALVSWHHSAGS*NKFDQN Trigger: ATTTTGATCGAATTTATTTCAACTTCCCGCACTGTG...GTGCCAGGATACAAGTGCACTGGGTATAGGAGCCAGGATAGGCCCTTTCACATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176145.2 |
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| CDS-3UTR TCA 90 bp | TTCATAGCAGCCTTATTTATAATAGCCAGAAGCTGGAAAGAACCCAGATGTCCCGCTCGGGCCACAGTGTaGAACTCCAGTTCATCAAAT | + |
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Preference number: 4 (lower is better) Translates to: FIAALFIIARSWKEPRCPARATV*NSSSSN Trigger: ATTTGATGAACTGGAGTTTCACACTGTGGCCCGAGC...GGGACATCTGGGTTCTTTCCAGCTTCTGGCTATTATAAATAAGGCTGCTATGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042391.13 |
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| CDS-3UTR TCA 90 bp | AGCCAGAAGCTGGAAAGAACCCAGATGTCCCTCAACAGAGGAATGGATACAGAATTTGAATCTCTTTTCTaGACTGGGACTGCATTGCTG | + |
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Preference number: 4 (lower is better) Translates to: SQKLERTQMSLNRGMDTEFESLF*TGTALL Trigger: CAGCAATGCAGTCCCAGTTCAGAAAAGAGATTCAAA...TTCTGTATCCATTCCTCTGTTGAGGGACATCTGGGTTCTTTCCAGCTTCTGGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042391.13 |
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| CDS-3UTR CCA 90 bp | AAACTGTGGATACTTCAGTCCTTCTTAGAAGGGGGAACAAAATACCCATGGGAGAAGGCATGTGACAGCTaGGTACAGTCCACACCAAAA | + |
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Preference number: 4 (lower is better) Translates to: KLWILQSFLEGGTKYPWEKACDS*VQSTPK Trigger: TTTTGGTGTGGACTGTACCCAGCTGTCACATGCCTT...CTCCCATGGGTATTTTGTTCCCCCTTCTAAGAAGGACTGAAGTATCCACAGTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042391.13 |
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| CDS-3UTR CCA 90 bp | CACCACCACTACCTCCACGGCCAGCCAGCCTATGCATTAAATGATGTTCACAGGGTTATTTCACCATTCTaGAACTCAGAACATGAGTTA | + |
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Preference number: 4 (lower is better) Translates to: HHHYLHGQPAYALNDVHRVISPF*NSEHEL Trigger: TAACTCATGTTCTGAGTTCCAGAATGGTGAAATAAC...CCTGTGAACATCATTTAATGCATAGGCTGGCTGGCCGTGGAGGTAGTGGTGGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042391.13 |
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| CDS-3UTR TCA 90 bp | GTGGATAGTAGCCCAAAGTTCAGAATACCCAAGATACAATTCACAAAACACAAGCTGAAAGTTCTGGGCTaGCAGCTCTCAAAGGGTAAG | + |
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Preference number: 4 (lower is better) Translates to: VDSSPKFRIPKIQFTKHKLKVLG*QLSKGK Trigger: CTTACCCTTTGAGAGCTGTCAGCCCAGAACTTTCAG...CTTGTGTTTTGTGAATTGTATCTTGGGTATTCTGAACTTTGGGCTACTATCCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042391.13 |
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| CDS-3UTR TCA 90 bp | GTCCAGAAAGGAACAAGTTTCAAGTTGTTCTTTTTCACCCACATACAACAAACAGTCTATAGCAGAGACTaGCCTGCCGAGTCTCTGGAT | + |
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Preference number: 4 (lower is better) Translates to: VQKGTSFKLFFFTHIQQTVYSRD*PAESLD Trigger: ATCCAGAGACTCGGCAGGTCAGTCTCTGCTATAGAC...TGTTTGTTGTATGTGGGTGAAAAAGAACAACTTGAAACTTGTTCCTTTCTGGAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042391.13 |
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| CDS-3UTR TCA 90 bp | TGGATAGTAGCCCAAAGTTCAGAATACCCAAGATACAATTCACAAAACACAAGAACACATCACTTAAAATaGACCCTCCCAGGGCTGCCA | + |
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Preference number: 4 (lower is better) Translates to: WIVAQSSEYPRYNSQNTRTHHLK*TLPGLP Trigger: TGGCAGCCCTGGGAGGGTTCATTTTAAGTGATGTGT...TCTTGTGTTTTGTGAATTGTATCTTGGGTATTCTGAACTTTGGGCTACTATCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042391.13 |
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| CDS-3UTR GCA 90 bp | TCCAGAAAGGAACAAGTTTCAAGTTGTTCTTTTTCACCCACATACAACAAACACCACATGGACTTCTCCTaGCTTTGCAAGGACATCAGC | + |
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Preference number: 4 (lower is better) Translates to: SRKEQVSSCSFSPTYNKHHMDFS*LCKDIS Trigger: GCTGATGTCCTTGCAAAGGCAGGAGAAGTCCATGTG...GTGTTTGTTGTATGTGGGTGAAAAAGAACAACTTGAAACTTGTTCCTTTCTGGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042391.13 |
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| CDS-3UTR GCA 90 bp | TGGATAGTAGCCCAAAGTTCAGAATACCCAAGATACAATTCACAAAACACAAGATTTCTGAACTGGGACTaGATTGCTGCTGCCAGCTGT | + |
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Preference number: 4 (lower is better) Translates to: WIVAQSSEYPRYNSQNTRFLNWD*IAAASC Trigger: ACAGCTGGCAGCAGCAATGCAGTCCCAGTTCAGAAA...TCTTGTGTTTTGTGAATTGTATCTTGGGTATTCTGAACTTTGGGCTACTATCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042391.13 |
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| CDS-3UTR CCA 90 bp | CAAAACCACAAGAGTCCAGAAAGGAACAAGTTTCAAGTTGTTCTTTTTCACCCACCTGTTCAGCTTTCCTaGAAGTGCTTCTGGTTCTGT | + |
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Preference number: 4 (lower is better) Translates to: QNHKSPERNKFQVVLFHPPVQLS*KCFWFC Trigger: ACAGAACCAGAAGCACTTCCAGGAAAGCTGAACAGG...TGGGTGAAAAAGAACAACTTGAAACTTGTTCCTTTCTGGACTCTTGTGGTTTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042391.13 |
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| CDS-3UTR TCA 90 bp | ACAAAACACAAGAAACTCAAGAAGAAGGAAGACCAAACTGTGGATACTTCAGTCGAAATGCTGGCATCATaGAAGGTAAGATGTGGCACT | + |
|
Preference number: 4 (lower is better) Translates to: TKHKKLKKKEDQTVDTSVEMLAS*KVRCGT Trigger: AGTGCCACATCTTACCTTTCATGATGCCAGCATTTC...GACTGAAGTATCCACAGTTTGGTCTTCCTTCTTCTTGAGTTTCTTGTGTTTTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042391.13 |
||
| CDS-3UTR TCA 90 bp | ACAAAACACAAGAAACTCAAGAAGAAGGAAGACCAAACTGTGGATACTTCAGTCTCCTTTCCGTTTGGTTaGAGGACAAATTCCACCGAA | + |
|
Preference number: 4 (lower is better) Translates to: TKHKKLKKKEDQTVDTSVSFPFG*RTNSTE Trigger: TTCGGTGGAATTTGTCCTTCAACCAAACGGAAAGGA...GACTGAAGTATCCACAGTTTGGTCTTCCTTCTTCTTGAGTTTCTTGTGTTTTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042391.13 |
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| CDS-3UTR CCA 90 bp | ACAAAACACAAGAAACTCAAGAAGAAGGAAGACCAAACTGTGGATACTTCAGTCAGCTCTGGAAAAACTTaGCAAGCAGTTCCCTGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: TKHKKLKKKEDQTVDTSVSSGKT*QAVPCS Trigger: AGAACAGGGAACTGCTTGCCAAGTTTTTCCAGAGCT...GACTGAAGTATCCACAGTTTGGTCTTCCTTCTTCTTGAGTTTCTTGTGTTTTGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042391.13 |
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| CDS-3UTR CCA 90 bp | CAAAACCACAAGAGTCCAGAAAGGAACAAGTTTCAAGTTGTTCTTTTTCACCCAACATCAGCACAGCTCTaGAAAAACTTGGCAAGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: QNHKSPERNKFQVVLFHPTSAQL*KNLASS Trigger: ACTGCTTGCCAAGTTTTTCCAGAGCTGTGCTGATGT...TGGGTGAAAAAGAACAACTTGAAACTTGTTCCTTTCTGGACTCTTGTGGTTTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000042391.13 |
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| CDS-3UTR CCA 90 bp | AGGAACAAGTTTCAAGTTGTTCTTTTTCACCCACATACAACAAACACTGCAGAAAGTGCACTTGTATCCTaGCACAGCCTCACAGCTAAA | + |
|
Preference number: 4 (lower is better) Translates to: RNKFQVVLFHPHTTNTAESALVS*HSLTAK Trigger: TTTAGCTGTGAGGCTGTGCCAGGATACAAGTGCACT...TTCTGCAGTGTTTGTTGTATGTGGGTGAAAAAGAACAACTTGAAACTTGTTCCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042391.13 |
||
| CDS-3UTR TCA 90 bp | TCCAGAAAGGAACAAGTTTCAAGTTGTTCTTTTTCACCCACATACAACAAACACATGACAGCTTCAACATaGACAAGAAGAGAAGGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: SRKEQVSSCSFSPTYNKHMTAST*TRREGL Trigger: CAGGCCTTCTCTTCTTGTTCATGTTGAAGCTGTCAT...GTGTTTGTTGTATGTGGGTGAAAAAGAACAACTTGAAACTTGTTCCTTTCTGGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042391.13 |
||
| CDS-3UTR GCA 90 bp | AAGGAACAAGTTTCAAGTTGTTCTTTTTCACCCACATACAACAAACACTGCAGAAGGATGACAGGAAGATaGTTCAAGGAACCTCCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: KEQVSSCSFSPTYNKHCRRMTGR*FKEPPV Trigger: AACAGGAGGTTCCTTGAAGCATCTTCCTGTCATCCT...TCTGCAGTGTTTGTTGTATGTGGGTGAAAAAGAACAACTTGAAACTTGTTCCTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042391.13 |
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| CDS-3UTR CCA 90 bp | ACAAAACACAAGAAACTCAAGAAGAAGGAAGACCAAACTGTGGATACTTCAGTCATGAAAGGTAAGATGTaGCACTTCCGAAAGACAGGT | + |
|
Preference number: 4 (lower is better) Translates to: TKHKKLKKKEDQTVDTSVMKGKM*HFRKTG Trigger: ACCTGTCTTTCGGAAGTGCCACATCTTACCTTTCAT...GACTGAAGTATCCACAGTTTGGTCTTCCTTCTTCTTGAGTTTCTTGTGTTTTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042391.13 |
||
| CDS-3UTR TCA 90 bp | CAAAACCACAAGAGTCCAGAAAGGAACAAGTTTCAAGTTGTTCTTTTTCACCCAACATGTAGCTGTCTTTaGATCTCTTTTCTGAACTGG | + |
|
Preference number: 4 (lower is better) Translates to: QNHKSPERNKFQVVLFHPTCSCL*ISFLNW Trigger: CCAGTTCAGAAAAGAGATTCAAAGACAGCTACATGT...TGGGTGAAAAAGAACAACTTGAAACTTGTTCCTTTCTGGACTCTTGTGGTTTTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000042391.13 |
||
| 3UTR CAA 72 bp | TTCTTAGGCAAATGGATGGATCTGAAGGATATTATCTaGAGTGAGGTAACCCAATCACAAAAGAACACACAT | + |
|
Preference number: 4 (lower is better) Translates to: FLGKWMDLKDII*SEVTQSQKNTH Trigger: ATGTGTGTTCTTTTGTGATTGGGTTACCTCACTCAAGATAATATCCTTCAGATCCATCCATTTGCCTAAGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042391.13 |
||
| CDS-3UTR TCA 90 bp | TGGATAGTAGCCCAAAGTTCAGAATACCCAAGATACAATTCACAAAACACAAGACACAGTGCGGGAAGTTaGAATAAATTCGATCAAAAT | + |
|
Preference number: 4 (lower is better) Translates to: WIVAQSSEYPRYNSQNTRHSAGS*NKFDQN Trigger: ATTTTGATCGAATTTATTTCAACTTCCCGCACTGTG...TCTTGTGTTTTGTGAATTGTATCTTGGGTATTCTGAACTTTGGGCTACTATCCA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042391.13 |
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| CDS-3UTR CCA 90 bp | TCCAGAAAGGAACAAGTTTCAAGTTGTTCTTTTTCACCCACATACAACAAACACATAATCCTTTCCGTTTaGTTGAAGGACAAATTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: SRKEQVSSCSFSPTYNKHIILSV*LKDKFH Trigger: GTGGAATTTGTCCTTCAACCAAACGGAAAGGATTAT...GTGTTTGTTGTATGTGGGTGAAAAAGAACAACTTGAAACTTGTTCCTTTCTGGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042391.13 |
||
| CDS TCA 90 bp | AGGGCTGCCATGGCAACTACTTGCCAACTGTTGTGCCACTCTCTCTaGGGCTTGTCAGCAGGCGTTCCACCTTGTCCTCTGCACAGTGTC | + |
|
Preference number: 5 (lower is better) Translates to: RAAMATTCQLLCHSL*GLSAGVPPCPLHSV Trigger: GACACTGTGCAGAGGACAAGGTGGAACGCCTGCTGACAAGCCTCAGAGAGAGTGGCACAACAGTTGGCAAGTAGTTGCCATGGCAGCCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042391.13 |
||
| CDS GCA 90 bp | GCCACTCTCTCTGAGGCTTGTCAGCAGGCGTTCCACCTTGTCCTCTaGACAGTGTCACATGGACTTCTCCTGCCTTTGCAAGGACATCAG | + |
|
Preference number: 5 (lower is better) Translates to: ATLSEACQQAFHLVL*TVSHGLLLPLQGHQ Trigger: CTGATGTCCTTGCAAAGGCAGGAGAAGTCCATGTGACACTGTGCAGAGGACAAGGTGGAACGCCTGCTGACAAGCCTCAGAGAGAGTGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042391.13 |
||
| CDS-3UTR CAA 90 bp | CACCACCACTACCTCCACGGCCAGCCAGCCTATGCATTAAATGATGTTCACAGGAGCAGGCGTTCCACCTaGTCCTCTGCACAGTGTCAC | + |
|
Preference number: 5 (lower is better) Translates to: HHHYLHGQPAYALNDVHRSRRST*SSAQCH Trigger: GTGACACTGTGCAGAGGACAAGGTGGAACGCCTGCT...CCTGTGAACATCATTTAATGCATAGGCTGGCTGGCCGTGGAGGTAGTGGTGGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042391.13 |
||
| CDS CCA 90 bp | ATTCGATCAAAATCCCTATCGTCGGCTGGCAAGGCATGTGACAGCTaGGTACAGTCCACACCAAAACGCACTTCGACACCTCGTTCGCGC | + |
|
Preference number: 5 (lower is better) Translates to: IRSKSLSSAGKACDS*VQSTPKRTSTPRSR Trigger: GCGCGAACGAGGTGTCGAAGTGCGTTTTGGTGTGGACTGTACCCAGCTGTCACATGCCTTGCCAGCCGACGATAGGGATTTTGATCGAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042391.13 ENSMUST00000176145.2 |
||
| CDS CCA 90 bp | GGCTTGTCAGCAGGCGTTCCACCTTGTCCTCTGCACAGTGTCACATaGACTTCTCCTGCCTTTGCAAGGACATCAGCACAGCTCTGGAAA | + |
|
Preference number: 5 (lower is better) Translates to: GLSAGVPPCPLHSVT*TSPAFARTSAQLWK Trigger: TTTCCAGAGCTGTGCTGATGTCCTTGCAAAGGCAGGAGAAGTCCATGTGACACTGTGCAGAGGACAAGGTGGAACGCCTGCTGACAAGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042391.13 |
||
| CDS GCA 90 bp | AGGCGTTCCACCTTGTCCTCTGCACAGTGTCACATGGACTTCTCCTaGCTTTGCAAGGACATCAGCACAGCTCTGGAAAAACTTGGCAAG | + |
|
Preference number: 5 (lower is better) Translates to: RRSTLSSAQCHMDFS*LCKDISTALEKLGK Trigger: CTTGCCAAGTTTTTCCAGAGCTGTGCTGATGTCCTTGCAAAGGCAGGAGAAGTCCATGTGACACTGTGCAGAGGACAAGGTGGAACGCCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042391.13 |
||
| CDS TCA 90 bp | GAAATAAATTCGATCAAAATCCCTATCGTCGGCTGGCAAGGCATGTaGCAGCTGGGTACAGTCCACACCAAAACGCACTTCGACACCTCG | + |
|
Preference number: 5 (lower is better) Translates to: EINSIKIPIVGWQGM*QLGTVHTKTHFDTS Trigger: CGAGGTGTCGAAGTGCGTTTTGGTGTGGACTGTACCCAGCTGTCACATGCCTTGCCAGCCGACGATAGGGATTTTGATCGAATTTATTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042391.13 ENSMUST00000176145.2 |
||
| CDS CCA 90 bp | AGTCTGATAGGTCAGTCTATAGCAGAGACTGACCTGCCGAGTCTCTaGATGCTGAAAACGATCACGGTACTGTACAGACACGACAGTGTC | + |
|
Preference number: 5 (lower is better) Translates to: SLIGQSIAETDLPSL*MLKTITVLYRHDSV Trigger: GACACTGTCGTGTCTGTACAGTACCGTGATCGTTTTCAGCATCCAGAGACTCGGCAGGTCAGTCTCTGCTATAGACTGACCTATCAGACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042391.13 ENSMUST00000176335.2 |
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| CDS-3UTR CAA 90 bp | TATAGAGCAGAGACTGAAGGAATGGCCATCCAGAGACTGCCCCACCTGGTTTGGATCCTTTCCGTTTGGTaGAAGGACAAATTCCACCGA | + |
|
Preference number: 5 (lower is better) Translates to: YRAETEGMAIQRLPHLVWILSVW*KDKFHR Trigger: TCGGTGGAATTTGTCCTTCAACCAAACGGAAAGGAT...CCAAACCAGGTGGGGCAGTCTCTGGATGGCCATTCCTTCAGTCTCTGCTCTATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042391.13 |
||
| CDS-3UTR CAA 90 bp | TATAGAGCAGAGACTGAAGGAATGGCCATCCAGAGACTGCCCCACCTGGTTTGGCAACTCTCCTTCATATaGTTATCAAATCCAAGGATG | + |
|
Preference number: 5 (lower is better) Translates to: YRAETEGMAIQRLPHLVWQLSFI*LSNPRM Trigger: CATCCTTGGATTTGATAACAATATGAAGGAGAGTTG...CCAAACCAGGTGGGGCAGTCTCTGGATGGCCATTCCTTCAGTCTCTGCTCTATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042391.13 |
||
| CDS TCA 90 bp | TTGCCCAATTCGGCAATGAGTTTCTCATTGATGGTTCTGATAGGATaGCAGGAAGATGCTTCAAGGAACCTCCTATACCCAGTGCACTTG | + |
|
Preference number: 5 (lower is better) Translates to: LPNSAMSFSLMVLIG*QEDASRNLLYPVHL Trigger: CAAGTGCACTGGGTATAGGAGGTTCCTTGAAGCATCTTCCTGTCATCCTATCAGAACCATCAATGAGAAACTCATTGCCGAATTGGGCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176335.2 |
||
| CDS-3UTR CAA 90 bp | AAGGAAGACCAAACTGTGGATACTTCAGTCCTTCTTAGAAGGGGGAACAAAATATGCCATGGCAACTACTaGCCAACTGTTGTGCCACTC | + |
|
Preference number: 5 (lower is better) Translates to: KEDQTVDTSVLLRRGNKICHGNY*PTVVPL Trigger: GAGTGGCACAACAGTTGGCAAGTAGTTGCCATGGCA...TATTTTGTTCCCCCTTCTAAGAAGGACTGAAGTATCCACAGTTTGGTCTTCCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042391.13 |
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| CDS CCA 90 bp | GCCAAAATTAAGAGACTTCACATGAATTATATAATCCTTTCCGTTTaGTTGAAGGACAAATTCCACCGAAGTGCCCAAACTAGAGCCCTC | + |
|
Preference number: 5 (lower is better) Translates to: AKIKRLHMNYIILSV*LKDKFHRSAQTRAL Trigger: GAGGGCTCTAGTTTGGGCACTTCGGTGGAATTTGTCCTTCAACCAAACGGAAAGGATTATATAATTCATGTGAAGTCTCTTAATTTTGGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042391.13 ENSMUST00000176335.2 |
||
| CDS-3UTR CAA 90 bp | AAACTGTGGATACTTCAGTCCTTCTTAGAAGGGGGAACAAAATACCCATGGGAGTATAATCCTTTCCGTTaGGTTGAAGGACAAATTCCA | + |
|
Preference number: 5 (lower is better) Translates to: KLWILQSFLEGGTKYPWEYNPFR*VEGQIP Trigger: TGGAATTTGTCCTTCAACCAAACGGAAAGGATTATA...CTCCCATGGGTATTTTGTTCCCCCTTCTAAGAAGGACTGAAGTATCCACAGTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042391.13 |
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| CDS TCA 90 bp | CTCTCCTTCATATTGTTATCAAATCCAAGGATGAATAAAGTCTCGTaGAATGCTGGCATCATGAAAGGTAAGATGTGGCACTTCCGAAAG | + |
|
Preference number: 5 (lower is better) Translates to: LSFILLSNPRMNKVS*NAGIMKGKMWHFRK Trigger: CTTTCGGAAGTGCCACATCTTACCTTTCATGATGCCAGCATTTCACGAGACTTTATTCATCCTTGGATTTGATAACAATATGAAGGAGAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042391.13 ENSMUST00000176335.2 |
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| CDS-3UTR CAA 90 bp | TGGATAGTAGCCCAAAGTTCAGAATACCCAAGATACAATTCACAAAACACAAGATTTAAGGGAAAAGTTTaGCCCAATTCGGCAATGAGT | + |
|
Preference number: 5 (lower is better) Translates to: WIVAQSSEYPRYNSQNTRFKGKV*PNSAMS Trigger: ACTCATTGCCGAATTGGGCAAAACTTTTCCCTTAAA...TCTTGTGTTTTGTGAATTGTATCTTGGGTATTCTGAACTTTGGGCTACTATCCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042391.13 |
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| CDS CCA 90 bp | ACTGACACAGGAATTTCTTCCATTTCTTGTGTTATTTCACCATTCTaGAACTCAGAACATGAGTTATCTTCATGTAGACGAATCCAAAAG | + |
|
Preference number: 5 (lower is better) Translates to: TDTGISSISCVISPF*NSEHELSSCRRIQK Trigger: CTTTTGGATTCGTCTACATGAAGATAACTCATGTTCTGAGTTCCAGAATGGTGAAATAACACAAGAAATGGAAGAAATTCCTGTGTCAGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042391.13 ENSMUST00000176335.2 |
||
| CDS CAA 72 bp | CCACTCTCTCTGAGGCTTGTCAGCAGGCGTTCCACCTaGTCCTCTGCACAGTGTCACATGGACTTCTCCTGC | + |
|
Preference number: 6 (lower is better) Translates to: PLSLRLVSRRST*SSAQCHMDFSC Trigger: GCAGGAGAAGTCCATGTGACACTGTGCAGAGGACAAGGTGGAACGCCTGCTGACAAGCCTCAGAGAGAGTGG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042391.13 |
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| CDS CCA 72 bp | GCAGGCGTTCCACCTTGTCCTCTGCACAGTGTCACATaGACTTCTCCTGCCTTTGCAAGGACATCAGCACAG | + |
|
Preference number: 6 (lower is better) Translates to: AGVPPCPLHSVT*TSPAFARTSAQ Trigger: CTGTGCTGATGTCCTTGCAAAGGCAGGAGAAGTCCATGTGACACTGTGCAGAGGACAAGGTGGAACGCCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042391.13 |
||
| CDS CAA 90 bp | ACTGTTGTGCCACTCTCTCTGAGGCTTGTCAGCAGGCGTTCCACCTaGTCCTCTGCACAGTGTCACATGGACTTCTCCTGCCTTTGCAAG | + |
|
Preference number: 6 (lower is better) Translates to: TVVPLSLRLVSRRST*SSAQCHMDFSCLCK Trigger: CTTGCAAAGGCAGGAGAAGTCCATGTGACACTGTGCAGAGGACAAGGTGGAACGCCTGCTGACAAGCCTCAGAGAGAGTGGCACAACAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042391.13 |
||
| CDS CCA 72 bp | AAATCCCTATCGTCGGCTGGCAAGGCATGTGACAGCTaGGTACAGTCCACACCAAAACGCACTTCGACACCT | + |
|
Preference number: 6 (lower is better) Translates to: KSLSSAGKACDS*VQSTPKRTSTP Trigger: AGGTGTCGAAGTGCGTTTTGGTGTGGACTGTACCCAGCTGTCACATGCCTTGCCAGCCGACGATAGGGATTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042391.13 ENSMUST00000176145.2 |
||
| CDS TCA 72 bp | TCGATCAAAATCCCTATCGTCGGCTGGCAAGGCATGTaGCAGCTGGGTACAGTCCACACCAAAACGCACTTC | + |
|
Preference number: 6 (lower is better) Translates to: SIKIPIVGWQGM*QLGTVHTKTHF Trigger: GAAGTGCGTTTTGGTGTGGACTGTACCCAGCTGTCACATGCCTTGCCAGCCGACGATAGGGATTTTGATCGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042391.13 ENSMUST00000176145.2 |
||
| CDS CCA 72 bp | GGTCAGTCTATAGCAGAGACTGACCTGCCGAGTCTCTaGATGCTGAAAACGATCACGGTACTGTACAGACAC | + |
|
Preference number: 6 (lower is better) Translates to: GQSIAETDLPSL*MLKTITVLYRH Trigger: GTGTCTGTACAGTACCGTGATCGTTTTCAGCATCCAGAGACTCGGCAGGTCAGTCTCTGCTATAGACTGACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042391.13 ENSMUST00000176335.2 |
||
| CDS CAA 72 bp | GAAGATGCTTCAAGGAACCTCCTATACCCAGTGCACTaGTATCCTGGCACAGCCTCACAGCTAAAGGGACAC | + |
|
Preference number: 6 (lower is better) Translates to: EDASRNLLYPVH*YPGTASQLKGH Trigger: GTGTCCCTTTAGCTGTGAGGCTGTGCCAGGATACAAGTGCACTGGGTATAGGAGGTTCCTTGAAGCATCTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176335.2 |
||
| CDS GCA 72 bp | ACCTTGTCCTCTGCACAGTGTCACATGGACTTCTCCTaGCTTTGCAAGGACATCAGCACAGCTCTGGAAAAA | + |
|
Preference number: 6 (lower is better) Translates to: TLSSAQCHMDFS*LCKDISTALEK Trigger: TTTTTCCAGAGCTGTGCTGATGTCCTTGCAAAGGCAGGAGAAGTCCATGTGACACTGTGCAGAGGACAAGGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042391.13 |
||
| CDS GCA 72 bp | TTGAATCTCTTTTCTGAACTGGGACTGCATTGCTGCTaGCAGCTGTGGGGTGAGAGCCTTATCACAAGTCTG | + |
|
Preference number: 6 (lower is better) Translates to: LNLFSELGLHCC*QLWGESLITSL Trigger: CAGACTTGTGATAAGGCTCTCACCCCACAGCTGGCAGCAGCAATGCAGTCCCAGTTCAGAAAAGAGATTCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042391.13 ENSMUST00000176335.2 |
||
| CDS CCA 72 bp | TTCAAGGAACCTCCTATACCCAGTGCACTTGTATCCTaGCACAGCCTCACAGCTAAAGGGACACACATCACT | + |
|
Preference number: 6 (lower is better) Translates to: FKEPPIPSALVS*HSLTAKGTHIT Trigger: AGTGATGTGTGTCCCTTTAGCTGTGAGGCTGTGCCAGGATACAAGTGCACTGGGTATAGGAGGTTCCTTGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176335.2 |
||
| CDS CAA 90 bp | ACTTCTCCTGCCTTTGCAAGGACATCAGCACAGCTCTGGAAAAACTaGGCAAGCAGTTCCCTGTTCTTAGCTACTCCAGCTTTTCGTCCA | + |
|
Preference number: 6 (lower is better) Translates to: TSPAFARTSAQLWKN*ASSSLFLATPAFRP Trigger: TGGACGAAAAGCTGGAGTAGCTAAGAACAGGGAACTGCTTGCCAAGTTTTTCCAGAGCTGTGCTGATGTCCTTGCAAAGGCAGGAGAAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042391.13 |
||
| CDS TCA 72 bp | TATCACAAGTCTGATAGGTCAGTCTATAGCAGAGACTaGCCTGCCGAGTCTCTGGATGCTGAAAACGATCAC | + |
|
Preference number: 6 (lower is better) Translates to: YHKSDRSVYSRD*PAESLDAENDH Trigger: GTGATCGTTTTCAGCATCCAGAGACTCGGCAGGTCAGTCTCTGCTATAGACTGACCTATCAGACTTGTGATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042391.13 ENSMUST00000176335.2 |
||
| CDS CAA 90 bp | AAAATTAAGAGACTTCACATGAATTATATAATCCTTTCCGTTTGGTaGAAGGACAAATTCCACCGAAGTGCCCAAACTAGAGCCCTCCTG | + |
|
Preference number: 6 (lower is better) Translates to: KIKRLHMNYIILSVW*KDKFHRSAQTRALL Trigger: CAGGAGGGCTCTAGTTTGGGCACTTCGGTGGAATTTGTCCTTCAACCAAACGGAAAGGATTATATAATTCATGTGAAGTCTCTTAATTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042391.13 ENSMUST00000176335.2 |
||
| CDS CAA 72 bp | AGACTTCACATGAATTATATAATCCTTTCCGTTTGGTaGAAGGACAAATTCCACCGAAGTGCCCAAACTAGA | + |
|
Preference number: 6 (lower is better) Translates to: RLHMNYIILSVW*KDKFHRSAQTR Trigger: TCTAGTTTGGGCACTTCGGTGGAATTTGTCCTTCAACCAAACGGAAAGGATTATATAATTCATGTGAAGTCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042391.13 ENSMUST00000176335.2 |
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