RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FDX2 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000079677

Ensembl transcript IDs: ENSMUST00000010348.7

Found 34 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCTCAGACACTGGCTGTCCCCAGTGGCAGCTCTGGTCTCACACTGTaGGTCCAACTTCTCTTTCCTGGGCAGTCCGTCCTCTGGAGTAGG +
Preference number: 1 (lower is better)
Translates to: AQTLAVPSGSSGLTL*VQLLFPGQSVLWSR
Trigger: CCTACTCCAGAGGACGGACTGCCCAGGAAAGAGAAGTTGGACCCACAGTGTGAGACCAGAGCTGCCACTGGGGACAGCCAGTGTCTGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000010348.7
3UTR CCA 90 bp ATGGAGACCCATCCCCCTCAGGGCTCAGACACTGGCTGTCCCCAGTaGCAGCTCTGGTCTCACACTGTGGGTCCAACTTCTCTTTCCTGG +
Preference number: 1 (lower is better)
Translates to: METHPPQGSDTGCPQ*QLWSHTVGPTSLSW
Trigger: CCAGGAAAGAGAAGTTGGACCCACAGTGTGAGACCAGAGCTGCCACTGGGGACAGCCAGTGTCTGAGCCCTGAGGGGGATGGGTCTCCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000010348.7
3UTR-3UTR CCA 90 bp GTCCCCAGTGGCAGCTCTGGTCTCACACTGTGGGTCCAACTTCTCTTTCCTGGGTTCAGTTCCATGGCCTaGTCTGTCCAGTGGCCTCAT +
Preference number: 2 (lower is better)
Translates to: VPSGSSGLTLWVQLLFPGFSSMA*SVQWPH
Trigger: ATGAGGCCACTGGACAGACCAGGCCATGGAACTGAA...CCCAGGAAAGAGAAGTTGGACCCACAGTGTGAGACCAGAGCTGCCACTGGGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000010348.7
3UTR-3UTR CCA 90 bp CAGCTCTGGTCTCACACTGTGGGTCCAACTTCTCTTTCCTGGGCAGTCCGTCCTTTCTTTTCAGTTCCATaGCCTGGTCTGTCCAGTGGC +
Preference number: 2 (lower is better)
Translates to: QLWSHTVGPTSLSWAVRPFFSVP*PGLSSG
Trigger: GCCACTGGACAGACCAGGCCATGGAACTGAAAAGAA...AGGACGGACTGCCCAGGAAAGAGAAGTTGGACCCACAGTGTGAGACCAGAGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000010348.7
3UTR CCA 72 bp CTGGCTGTCCCCAGTGGCAGCTCTGGTCTCACACTGTaGGTCCAACTTCTCTTTCCTGGGCAGTCCGTCCTC +
Preference number: 3 (lower is better)
Translates to: LAVPSGSSGLTL*VQLLFPGQSVL
Trigger: GAGGACGGACTGCCCAGGAAAGAGAAGTTGGACCCACAGTGTGAGACCAGAGCTGCCACTGGGGACAGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000010348.7
3UTR CCA 72 bp CATCCCCCTCAGGGCTCAGACACTGGCTGTCCCCAGTaGCAGCTCTGGTCTCACACTGTGGGTCCAACTTCT +
Preference number: 3 (lower is better)
Translates to: HPPQGSDTGCPQ*QLWSHTVGPTS
Trigger: AGAAGTTGGACCCACAGTGTGAGACCAGAGCTGCCACTGGGGACAGCCAGTGTCTGAGCCCTGAGGGGGATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000010348.7
3UTR CCA 72 bp AGTTCGATTCTCCCTGGTGGACTGACACACCCAAGATaGAGACCCATCCCCCTCAGGGCTCAGACACTGGCT +
Preference number: 3 (lower is better)
Translates to: SSILPGGLTHPR*RPIPLRAQTLA
Trigger: AGCCAGTGTCTGAGCCCTGAGGGGGATGGGTCTCCATCTTGGGTGTGTCAGTCCACCAGGGAGAATCGAACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000010348.7
CDS-3UTR GCA 90 bp TCAGACACTGGCTGTCCCCAGTGGCAGCTCTGGTCTCACACTGTGGGTCCAACTGATGTTACCGCCGCGTaGCCGGCCCTGGGTCCCCAA +
Preference number: 4 (lower is better)
Translates to: SDTGCPQWQLWSHTVGPTDVTAA*PALGPQ
Trigger: TTGGGGACCCAGGGCCGGGCACGCGGCGGTAACATC...AGTTGGACCCACAGTGTGAGACCAGAGCTGCCACTGGGGACAGCCAGTGTCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000010348.7
CDS-3UTR GCA 90 bp CCTGGTGGACTGACACACCCAAGATGGAGACCCATCCCCCTCAGGGCTCAGACAGGAACAGGCCAGGGATaGTTCGCAGGCCCCTTCCAG +
Preference number: 4 (lower is better)
Translates to: PGGLTHPRWRPIPLRAQTGTGQG*FAGPFQ
Trigger: CTGGAAGGGGCCTGCGAAGCATCCCTGGCCTGTTCC...TGTCTGAGCCCTGAGGGGGATGGGTCTCCATCTTGGGTGTGTCAGTCCACCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000010348.7
CDS-3UTR CCA 90 bp ACACTGGCTGTCCCCAGTGGCAGCTCTGGTCTCACACTGTGGGTCCAACTTCTCTCCAGGTCCACCCCGTaGCGCTGGGCCAGGTATAGA +
Preference number: 4 (lower is better)
Translates to: TLAVPSGSSGLTLWVQLLSRSTP*RWARYR
Trigger: TCTATACCTGGCCCAGCGCCACGGGGTGGACCTGGA...GAGAAGTTGGACCCACAGTGTGAGACCAGAGCTGCCACTGGGGACAGCCAGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000010348.7
CDS-3UTR CCA 90 bp TCAGACACTGGCTGTCCCCAGTGGCAGCTCTGGTCTCACACTGTGGGTCCAACTTCCACCCCGTGGCGCTaGGCCAGGTATAGAACATTG +
Preference number: 4 (lower is better)
Translates to: SDTGCPQWQLWSHTVGPTSTPWR*ARYRTL
Trigger: CAATGTTCTATACCTGGCCCAGCGCCACGGGGTGGA...AGTTGGACCCACAGTGTGAGACCAGAGCTGCCACTGGGGACAGCCAGTGTCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000010348.7
CDS-3UTR CCA 90 bp CTCAGACACTGGCTGTCCCCAGTGGCAGCTCTGGTCTCACACTGTGGGTCCAACCATACACATGACAGGTaGAACAGGCCAGGGATGCTT +
Preference number: 4 (lower is better)
Translates to: LRHWLSPVAALVSHCGSNHTHDR*NRPGML
Trigger: AAGCATCCCTGGCCTGTTCCACCTGTCATGTGTATG...GTTGGACCCACAGTGTGAGACCAGAGCTGCCACTGGGGACAGCCAGTGTCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000010348.7
CDS-3UTR CCA 90 bp CTGGCTGTCCCCAGTGGCAGCTCTGGTCTCACACTGTGGGTCCAACTTCTCTTTGGGGTCAGCACAATCTaGCAGCCCAGTCTTGAGTTC +
Preference number: 4 (lower is better)
Translates to: LAVPSGSSGLTLWVQLLFGVSTI*QPSLEF
Trigger: GAACTCAAGACTGGGCTGCCAGATTGTGCTGACCCC...AAAGAGAAGTTGGACCCACAGTGTGAGACCAGAGCTGCCACTGGGGACAGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000010348.7
CDS-3UTR TCA 90 bp CTGGTCTCACACTGTGGGTCCAACTTCTCTTTCCTGGGCAGTCCGTCCTCTGGATCACTCACATACACATaGCAGGTGGAACAGGCCAGG +
Preference number: 4 (lower is better)
Translates to: LVSHCGSNFSFLGSPSSGSLTYT*QVEQAR
Trigger: CCTGGCCTGTTCCACCTGTCATGTGTATGTGAGTGA...TCCAGAGGACGGACTGCCCAGGAAAGAGAAGTTGGACCCACAGTGTGAGACCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000010348.7
CDS-3UTR CCA 90 bp TGGTCTCACACTGTGGGTCCAACTTCTCTTTCCTGGGCAGTCCGTCCTCTGGAGGTTCTCTTGGAGCAGTaGAGCCATGTCCAACATGTC +
Preference number: 4 (lower is better)
Translates to: WSHTVGPTSLSWAVRPLEVLLEQ*SHVQHV
Trigger: GACATGTTGGACATGGCTCCACTGCTCCAAGAGAAC...CTCCAGAGGACGGACTGCCCAGGAAAGAGAAGTTGGACCCACAGTGTGAGACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000010348.7
CDS-3UTR TCA 90 bp CCCAGTGGCAGCTCTGGTCTCACACTGTGGGTCCAACTTCTCTTTCCTGGGCAGCATAGAAGTTCCTGGTaGTCTTGGGAAGAGCAAATT +
Preference number: 4 (lower is better)
Translates to: PSGSSGLTLWVQLLFPGQHRSSW*SWEEQI
Trigger: AATTTGCTCTTCCCAAGATCACCAGGAACTTCTATG...CTGCCCAGGAAAGAGAAGTTGGACCCACAGTGTGAGACCAGAGCTGCCACTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000010348.7
CDS-3UTR CCA 90 bp TCCTCTGGAGTAGGAAGCGTGGCTTTTCTTTTCAGTTCCATGGCCTGGTCTGTCAGTCTTGAGTTCTCTTaGAGCAGTGGAGCCATGTCC +
Preference number: 4 (lower is better)
Translates to: SSGVGSVAFLFSSMAWSVSLEFS*SSGAMS
Trigger: GGACATGGCTCCACTGCTCCAAGAGAACTCAAGACT...GACAGACCAGGCCATGGAACTGAAAAGAAAAGCCACGCTTCCTACTCCAGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000010348.7
CDS GCA 90 bp CGCCGCTCGCCTGTAGTCCCGAACGTCCTAGATGTTACCGCCGCGTaGCCGGCCCTGGGTCCCCAAGATCCCCCGGCCGCCCGTAACAGG +
Preference number: 5 (lower is better)
Translates to: RRSPVVPNVLDVTAA*PALGPQDPPAARNR
Trigger: CCTGTTACGGGCGGCCGGGGGATCTTGGGGACCCAGGGCCGGGCACGCGGCGGTAACATCTAGGACGTTCGGGACTACAGGCGAGCGGCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000010348.7
CDS GCA 90 bp CCACCCCGTGGCGCTGGGCCAGGTATAGAACATTGTCCCCGACTTTaGCCCTCACCGGGATCCGCTTGCCAGAGCGGTCCACGAACACCA +
Preference number: 5 (lower is better)
Translates to: PPRGAGPGIEHCPRL*PSPGSACQSGPRTP
Trigger: TGGTGTTCGTGGACCGCTCTGGCAAGCGGATCCCGGTGAGGGGCAAAGTCGGGGACAATGTTCTATACCTGGCCCAGCGCCACGGGGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000010348.7
CDS-3UTR CAA 90 bp TCTGGTCTCACACTGTGGGTCCAACTTCTCTTTCCTGGGCAGTCCGTCCTCTGGACATTGTCCCCGACTTaGCCCCTCACCGGGATCCGC +
Preference number: 5 (lower is better)
Translates to: SGLTLWVQLLFPGQSVLWTLSPT*PLTGIR
Trigger: GCGGATCCCGGTGAGGGGCAAAGTCGGGGACAATGT...CCAGAGGACGGACTGCCCAGGAAAGAGAAGTTGGACCCACAGTGTGAGACCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000010348.7
CDS CCA 90 bp AGCTCAGGGGTCAGCACAATCTGGCAGCCCAGTCTTGAGTTCTCTTaGAGCAGTGGAGCCATGTCCAACATGTCGTCCTCCCTCTCCTCA +
Preference number: 5 (lower is better)
Translates to: SSGVSTIWQPSLEFS*SSGAMSNMSSSLSS
Trigger: TGAGGAGAGGGAGGACGACATGTTGGACATGGCTCCACTGCTCCAAGAGAACTCAAGACTGGGCTGCCAGATTGTGCTGACCCCTGAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000010348.7
CDS-3UTR CAA 90 bp CTGGCTGTCCCCAGTGGCAGCTCTGGTCTCACACTGTGGGTCCAACTTCTCTTTTCTGGCAGCCCAGTCTaGAGTTCTCTTGGAGCAGTG +
Preference number: 5 (lower is better)
Translates to: LAVPSGSSGLTLWVQLLFSGSPV*SSLGAV
Trigger: CACTGCTCCAAGAGAACTCAAGACTGGGCTGCCAGA...AAAGAGAAGTTGGACCCACAGTGTGAGACCAGAGCTGCCACTGGGGACAGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000010348.7
CDS CCA 90 bp GGAAGAGCAAATTCAACTCCCTCTAGCTCAGGGGTCAGCACAATCTaGCAGCCCAGTCTTGAGTTCTCTTGGAGCAGTGGAGCCATGTCC +
Preference number: 5 (lower is better)
Translates to: GRANSTPSSSGVSTI*QPSLEFSWSSGAMS
Trigger: GGACATGGCTCCACTGCTCCAAGAGAACTCAAGACTGGGCTGCCAGATTGTGCTGACCCCTGAGCTAGAGGGAGTTGAATTTGCTCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000010348.7
CDS CAA 90 bp CCCCTCACCGGGATCCGCTTGCCAGAGCGGTCCACGAACACCACGTaGACCACGTCCCGGGGCAGCTCCGGGCTGTCCGCCGCCTCCTCG +
Preference number: 6 (lower is better)
Translates to: PLTGIRLPERSTNTT*TTSRGSSGLSAASS
Trigger: CGAGGAGGCGGCGGACAGCCCGGAGCTGCCCCGGGACGTGGTCAACGTGGTGTTCGTGGACCGCTCTGGCAAGCGGATCCCGGTGAGGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000010348.7
CDS GCA 72 bp CCTGTAGTCCCGAACGTCCTAGATGTTACCGCCGCGTaGCCGGCCCTGGGTCCCCAAGATCCCCCGGCCGCC +
Preference number: 6 (lower is better)
Translates to: PVVPNVLDVTAA*PALGPQDPPAA
Trigger: GGCGGCCGGGGGATCTTGGGGACCCAGGGCCGGGCACGCGGCGGTAACATCTAGGACGTTCGGGACTACAGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000010348.7
CDS CAA 72 bp GGGATCCGCTTGCCAGAGCGGTCCACGAACACCACGTaGACCACGTCCCGGGGCAGCTCCGGGCTGTCCGCC +
Preference number: 6 (lower is better)
Translates to: GIRLPERSTNTT*TTSRGSSGLSA
Trigger: GGCGGACAGCCCGGAGCTGCCCCGGGACGTGGTCAACGTGGTGTTCGTGGACCGCTCTGGCAAGCGGATCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000010348.7
CDS CAA 72 bp TGGCGCTGGGCCAGGTATAGAACATTGTCCCCGACTTaGCCCCTCACCGGGATCCGCTTGCCAGAGCGGTCC +
Preference number: 6 (lower is better)
Translates to: WRWARYRTLSPT*PLTGIRLPERS
Trigger: GGACCGCTCTGGCAAGCGGATCCCGGTGAGGGGCAAAGTCGGGGACAATGTTCTATACCTGGCCCAGCGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000010348.7
CDS GCA 72 bp ACTCACATACACATGACAGGTGGAACAGGCCAGGGATaGTTCGCAGGCCCCTTCCAGGTCCACCCCGTGGCG +
Preference number: 6 (lower is better)
Translates to: THIHMTGGTGQG*FAGPFQVHPVA
Trigger: CGCCACGGGGTGGACCTGGAAGGGGCCTGCGAAGCATCCCTGGCCTGTTCCACCTGTCATGTGTATGTGAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000010348.7
CDS TCA 72 bp GGCAGGAGATCCAGGTGGGCCTCACTCACATACACATaGCAGGTGGAACAGGCCAGGGATGCTTCGCAGGCC +
Preference number: 6 (lower is better)
Translates to: GRRSRWASLTYT*QVEQARDASQA
Trigger: GGCCTGCGAAGCATCCCTGGCCTGTTCCACCTGTCATGTGTATGTGAGTGAGGCCCACCTGGATCTCCTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000010348.7
CDS CCA 72 bp GATCCAGGTGGGCCTCACTCACATACACATGACAGGTaGAACAGGCCAGGGATGCTTCGCAGGCCCCTTCCA +
Preference number: 6 (lower is better)
Translates to: DPGGPHSHTHDR*NRPGMLRRPLP
Trigger: TGGAAGGGGCCTGCGAAGCATCCCTGGCCTGTTCCACCTGTCATGTGTATGTGAGTGAGGCCCACCTGGATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000010348.7
CDS CAA 90 bp CAACTCCCTCTAGCTCAGGGGTCAGCACAATCTGGCAGCCCAGTCTaGAGTTCTCTTGGAGCAGTGGAGCCATGTCCAACATGTCGTCCT +
Preference number: 6 (lower is better)
Translates to: QLPLAQGSAQSGSPV*SSLGAVEPCPTCRP
Trigger: AGGACGACATGTTGGACATGGCTCCACTGCTCCAAGAGAACTCAAGACTGGGCTGCCAGATTGTGCTGACCCCTGAGCTAGAGGGAGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000010348.7
CDS CCA 72 bp GTCAGCACAATCTGGCAGCCCAGTCTTGAGTTCTCTTaGAGCAGTGGAGCCATGTCCAACATGTCGTCCTCC +
Preference number: 6 (lower is better)
Translates to: VSTIWQPSLEFS*SSGAMSNMSSS
Trigger: GGAGGACGACATGTTGGACATGGCTCCACTGCTCCAAGAGAACTCAAGACTGGGCTGCCAGATTGTGCTGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000010348.7
CDS CAA 72 bp CTAGCTCAGGGGTCAGCACAATCTGGCAGCCCAGTCTaGAGTTCTCTTGGAGCAGTGGAGCCATGTCCAACA +
Preference number: 6 (lower is better)
Translates to: LAQGSAQSGSPV*SSLGAVEPCPT
Trigger: TGTTGGACATGGCTCCACTGCTCCAAGAGAACTCAAGACTGGGCTGCCAGATTGTGCTGACCCCTGAGCTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000010348.7
CDS CCA 72 bp AATTCAACTCCCTCTAGCTCAGGGGTCAGCACAATCTaGCAGCCCAGTCTTGAGTTCTCTTGGAGCAGTGGA +
Preference number: 6 (lower is better)
Translates to: NSTPSSSGVSTI*QPSLEFSWSSG
Trigger: TCCACTGCTCCAAGAGAACTCAAGACTGGGCTGCCAGATTGTGCTGACCCCTGAGCTAGAGGGAGTTGAATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000010348.7