Pregenerated sensors for FDPS (Mus musculus)

Ensembl gene IDs: ENSMUSG00000059743

Ensembl transcript IDs: ENSMUST00000196921.5

Found 2 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS GCA 90 bp	GCTCGAGGCTCCTCTGTCCACACTTGGCACCACCAGCGGGCACTGTaGCAGGCCCCCAGGACTGGACACCCATATGCCAGGGAGGGTCGT	+
Preference number: 5 (lower is better) Translates to: ARGSSVHTWHHQRAL*QAPRTGHPYAREGR Trigger: ACGACCCTCCCTGGCATATGGGTGTCCAGTCCTGGGGGCCTGGCACAGTGCCCGCTGGTGGTGCCAAGTGTGGACAGAGGAGCCTCGAGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000196921.5
CDS GCA 72 bp	TCCTCTGTCCACACTTGGCACCACCAGCGGGCACTGTaGCAGGCCCCCAGGACTGGACACCCATATGCCAGG	+
Preference number: 6 (lower is better) Translates to: SSVHTWHHQRAL*QAPRTGHPYAR Trigger: CCTGGCATATGGGTGTCCAGTCCTGGGGGCCTGGCACAGTGCCCGCTGGTGGTGCCAAGTGTGGACAGAGGA 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000196921.5

---

If you would like us to post a table for your organism of interest, or have questions, please reach out to eerik at stanford dot edu or xjgao at stanford.edu