Pregenerated sensors for FCRLS (Mus musculus)
Ensembl gene IDs: ENSMUSG00000015852Ensembl transcript IDs: ENSMUST00000090986.11, ENSMUST00000146512.2
Found 70 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TTGTTAGACCACATTCTACCAGATGGAAGCCCAGGCACATGTATGTaGTCCTCACTTGCGCCACCTCTGCGCACGTCTGCCCAAGGAGAT | + |
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Preference number: 1 (lower is better) Translates to: LLDHILPDGSPGTCM*SSLAPPLRTSAQGD Trigger: ATCTCCTTGGGCAGACGTGCGCAGAGGTGGCGCAAGTGAGGATCACATACATGTGCCTGGGCTTCCATCTGGTAGAATGTGGTCTAACAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090986.11 |
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| 3UTR CCA 90 bp | AGTTTCTTTTGTTGTATGTGCTTTGTTAGACCACATTCTACCAGATaGAAGCCCAGGCACATGTATGTGATCCTCACTTGCGCCACCTCT | + |
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Preference number: 1 (lower is better) Translates to: SFFCCMCFVRPHSTR*KPRHMYVILTCATS Trigger: AGAGGTGGCGCAAGTGAGGATCACATACATGTGCCTGGGCTTCCATCTGGTAGAATGTGGTCTAACAAAGCACATACAACAAAAGAAACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090986.11 |
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| 3UTR CAA 90 bp | ACATTCTACCAGATGGAAGCCCAGGCACATGTATGTGATCCTCACTaGCGCCACCTCTGCGCACGTCTGCCCAAGGAGATAGCAAGAAGG | + |
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Preference number: 2 (lower is better) Translates to: TFYQMEAQAHVCDPH*RHLCARLPKEIARR Trigger: CCTTCTTGCTATCTCCTTGGGCAGACGTGCGCAGAGGTGGCGCAAGTGAGGATCACATACATGTGCCTGGGCTTCCATCTGGTAGAATGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090986.11 |
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| 3UTR-3UTR CCA 90 bp | TACCAGATGGAAGCCCAGGCACATGTATGTGATCCTCACTTGCGCCACCTCTGCCAATTTTTCCAAGCTTaGCCTCTGGGGGCAAGGGAC | + |
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Preference number: 2 (lower is better) Translates to: YQMEAQAHVCDPHLRHLCQFFQA*PLGARD Trigger: GTCCCTTGCCCCCAGAGGCCAAGCTTGGAAAAATTG...GCAGAGGTGGCGCAAGTGAGGATCACATACATGTGCCTGGGCTTCCATCTGGTA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000090986.11 |
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| 3UTR-3UTR TCA 90 bp | GAAAGGCAGGGAACCTGGACAGGGGAACAATTTTTCCAAGCTTGGCCTCTGGGGATGATAAGCCACAGCTaGAGTCTGGAAGTCCACTGG | + |
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Preference number: 2 (lower is better) Translates to: ERQGTWTGEQFFQAWPLGMISHS*SLEVHW Trigger: CCAGTGGACTTCCAGACTTCAGCTGTGGCTTATCAT...CCCCAGAGGCCAAGCTTGGAAAAATTGTTCCCCTGTCCAGGTTCCCTGCCTTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000090986.11 |
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| 3UTR-3UTR CCA 90 bp | CAGATGGAAGCCCAGGCACATGTATGTGATCCTCACTTGCGCCACCTCTGCGCAGACTCGGGCTTTCTTTaGAGCTTTTGGAACATTATC | + |
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Preference number: 2 (lower is better) Translates to: QMEAQAHVCDPHLRHLCADSGFL*SFWNII Trigger: GATAATGTTCCAAAAGCTCCAAAGAAAGCCCGAGTC...TGCGCAGAGGTGGCGCAAGTGAGGATCACATACATGTGCCTGGGCTTCCATCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090986.11 |
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| 3UTR-3UTR CCA 90 bp | GAAAGGCAGGGAACCTGGACAGGGGAACAATTTTTCCAAGCTTGGCCTCTGGGGTTTCTTTGGAGCTTTTaGAACATTATCTCAGAGCAG | + |
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Preference number: 2 (lower is better) Translates to: ERQGTWTGEQFFQAWPLGFLWSF*NIISEQ Trigger: CTGCTCTGAGATAATGTTCCAAAAGCTCCAAAGAAA...CCCCAGAGGCCAAGCTTGGAAAAATTGTTCCCCTGTCCAGGTTCCCTGCCTTTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000090986.11 |
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| 3UTR-3UTR CCA 90 bp | CCCATGTCAAGAAATGAACACGCACTGAGAGTTTCTTTTGTTGTATGTGCTTTGGAAAGGCAGGGAACCTaGACAGGGGAACAATTTTTC | + |
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Preference number: 2 (lower is better) Translates to: PMSRNEHALRVSFVVCALERQGT*TGEQFF Trigger: GAAAAATTGTTCCCCTGTCCAGGTTCCCTGCCTTTC...CAAAGCACATACAACAAAAGAAACTCTCAGTGCGTGTTCATTTCTTGACATGGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000090986.11 |
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| 3UTR-3UTR CAA 90 bp | TGGAAGCCCAGGCACATGTATGTGATCCTCACTTGCGCCACCTCTGCGCACGTCGGACTCGGGCTTTCTTaGGAGCTTTTGGAACATTAT | + |
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Preference number: 3 (lower is better) Translates to: WKPRHMYVILTCATSAHVGLGLS*ELLEHY Trigger: ATAATGTTCCAAAAGCTCCAAAGAAAGCCCGAGTCC...GACGTGCGCAGAGGTGGCGCAAGTGAGGATCACATACATGTGCCTGGGCTTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090986.11 |
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| 3UTR CCA 72 bp | GCTTGGCCTCTGGGGGCAAGGGACTCGGGCTTTCTTTaGAGCTTTTGGAACATTATCTCAGAGCAGATTAAT | + |
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Preference number: 3 (lower is better) Translates to: AWPLGARDSGFL*SFWNIISEQIN Trigger: ATTAATCTGCTCTGAGATAATGTTCCAAAAGCTCCAAAGAAAGCCCGAGTCCCTTGCCCCCAGAGGCCAAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090986.11 |
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| 3UTR-3UTR CAA 90 bp | GCTAGAAAGGCAGGGAACCTGGACAGGGGAACAATTTTTCCAAGCTTGGCCTCTCTTTCTTTGGAGCTTTaGGAACATTATCTCAGAGCA | + |
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Preference number: 3 (lower is better) Translates to: ARKAGNLDRGTIFPSLASLSLEL*EHYLRA Trigger: TGCTCTGAGATAATGTTCCAAAAGCTCCAAAGAAAG...AGAGGCCAAGCTTGGAAAAATTGTTCCCCTGTCCAGGTTCCCTGCCTTTCTAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090986.11 |
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| 3UTR CCA 72 bp | TGTTGTATGTGCTTTGTTAGACCACATTCTACCAGATaGAAGCCCAGGCACATGTATGTGATCCTCACTTGC | + |
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Preference number: 3 (lower is better) Translates to: CCMCFVRPHSTR*KPRHMYVILTC Trigger: GCAAGTGAGGATCACATACATGTGCCTGGGCTTCCATCTGGTAGAATGTGGTCTAACAAAGCACATACAACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090986.11 |
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| CDS-3UTR GCA 90 bp | TGGAAGCCCAGGCACATGTATGTGATCCTCACTTGCGCCACCTCTGCGCACGTCCTCCCCTCTACGGGCTaGAGGGGGCTGGCTGTCAGC | + |
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Preference number: 4 (lower is better) Translates to: WKPRHMYVILTCATSAHVLPSTG*RGLAVS Trigger: GCTGACAGCCAGCCCCCTGCAGCCCGTAGAGGGGAG...GACGTGCGCAGAGGTGGCGCAAGTGAGGATCACATACATGTGCCTGGGCTTCCA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090986.11 |
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| CDS-3UTR TCA 90 bp | TGGGGGCAAGGGACTCGGGCTTTCTTTGGAGCTTTTGGAACATTATCTCAGAGCGCAGGACAGGGTCACTaGACTCCCCTCTACGGGCTG | + |
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Preference number: 4 (lower is better) Translates to: WGQGTRAFFGAFGTLSQSAGQGH*TPLYGL Trigger: CAGCCCGTAGAGGGGAGTTCAGTGACCCTGTCCTGC...GCTCTGAGATAATGTTCCAAAAGCTCCAAAGAAAGCCCGAGTCCCTTGCCCCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000090986.11 |
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| CDS-3UTR CCA 90 bp | TGGAAGCCCAGGCACATGTATGTGATCCTCACTTGCGCCACCTCTGCGCACGTCTCAAAGGCCTCAACCTaGTCACATTCAGCCAGGGTC | + |
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Preference number: 4 (lower is better) Translates to: WKPRHMYVILTCATSAHVSKAST*SHSARV Trigger: GACCCTGGCTGAATGTGACCAGGTTGAGGCCTTTGA...GACGTGCGCAGAGGTGGCGCAAGTGAGGATCACATACATGTGCCTGGGCTTCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090986.11 |
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| 3UTR CAA 72 bp | CAGATGGAAGCCCAGGCACATGTATGTGATCCTCACTaGCGCCACCTCTGCGCACGTCTGCCCAAGGAGATA | + |
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Preference number: 4 (lower is better) Translates to: QMEAQAHVCDPH*RHLCARLPKEI Trigger: TATCTCCTTGGGCAGACGTGCGCAGAGGTGGCGCAAGTGAGGATCACATACATGTGCCTGGGCTTCCATCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090986.11 |
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| CDS-3UTR CCA 90 bp | TTTTGTTGTATGTGCTTTGTTAGACCACATTCTACCAGATGGAAGCCCAGGCACCGGGCTGCAGGGGGCTaGCTGTCAGCCCAGGTGCTG | + |
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Preference number: 4 (lower is better) Translates to: FCCMCFVRPHSTRWKPRHRAAGG*LSAQVL Trigger: CAGCACCTGGGCTGACAGCCAGCCCCCTGCAGCCCG...GTGCCTGGGCTTCCATCTGGTAGAATGTGGTCTAACAAAGCACATACAACAAAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090986.11 |
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| CDS-3UTR GCA 90 bp | TGGAAGCCCAGGCACATGTATGTGATCCTCACTTGCGCCACCTCTGCGCACGTCGTTCCCAGAATGCCCTaGAGTCAGAGAGAGCTTAAA | + |
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Preference number: 4 (lower is better) Translates to: WKPRHMYVILTCATSAHVVPRMP*SQRELK Trigger: TTTAAGCTCTCTCTGACTGCAGGGCATTCTGGGAAC...GACGTGCGCAGAGGTGGCGCAAGTGAGGATCACATACATGTGCCTGGGCTTCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090986.11 |
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| CDS-3UTR GCA 90 bp | CAGATGGAAGCCCAGGCACATGTATGTGATCCTCACTTGCGCCACCTCTGCGCAACTGTCACCGCGTCTTaGATTCCTAATGGTGTAGCT | + |
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Preference number: 4 (lower is better) Translates to: QMEAQAHVCDPHLRHLCATVTAS*IPNGVA Trigger: AGCTACACCATTAGGAATGCAAGACGCGGTGACAGT...TGCGCAGAGGTGGCGCAAGTGAGGATCACATACATGTGCCTGGGCTTCCATCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090986.11 |
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| CDS-3UTR GCA 90 bp | GAAAGGCAGGGAACCTGGACAGGGGAACAATTTTTCCAAGCTTGGCCTCTGGGGCATCATCACATACAGTaGCCCAGCGACCTTCCTGTT | + |
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Preference number: 4 (lower is better) Translates to: ERQGTWTGEQFFQAWPLGHHHIQ*PSDLPV Trigger: AACAGGAAGGTCGCTGGGGCACTGTATGTGATGATG...CCCCAGAGGCCAAGCTTGGAAAAATTGTTCCCCTGTCCAGGTTCCCTGCCTTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000090986.11 |
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| CDS-3UTR GCA 90 bp | GAAAGGCAGGGAACCTGGACAGGGGAACAATTTTTCCAAGCTTGGCCTCTGGGGCAGAGCTTCATCAACTaGTGGTGGATACAGCATGGC | + |
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Preference number: 4 (lower is better) Translates to: ERQGTWTGEQFFQAWPLGQSFIN*WWIQHG Trigger: GCCATGCTGTATCCACCAGCAGTTGATGAAGCTCTG...CCCCAGAGGCCAAGCTTGGAAAAATTGTTCCCCTGTCCAGGTTCCCTGCCTTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000090986.11 |
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| CDS-3UTR TCA 90 bp | TGGAAGCCCAGGCACATGTATGTGATCCTCACTTGCGCCACCTCTGCGCACGTCACACCAGTAATTTCCTaGGTCTTCCTTCGATATTGC | + |
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Preference number: 4 (lower is better) Translates to: WKPRHMYVILTCATSAHVTPVIS*VFLRYC Trigger: GCAATATCGAAGGAAGACTCAGGAAATTACTGGTGT...GACGTGCGCAGAGGTGGCGCAAGTGAGGATCACATACATGTGCCTGGGCTTCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090986.11 |
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| CDS-3UTR TCA 90 bp | TACCAGATGGAAGCCCAGGCACATGTATGTGATCCTCACTTGCGCCACCTCTGCAAGTGTGGCCATCTTTaGAGAAGGAATAGCGTAGCT | + |
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Preference number: 4 (lower is better) Translates to: YQMEAQAHVCDPHLRHLCKCGHL*RRNSVA Trigger: AGCTACGCTATTCCTTCTTCAAAGATGGCCACACTT...GCAGAGGTGGCGCAAGTGAGGATCACATACATGTGCCTGGGCTTCCATCTGGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090986.11 |
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| CDS-3UTR TCA 90 bp | GCTAGAAAGGCAGGGAACCTGGACAGGGGAACAATTTTTCCAAGCTTGGCCTCTACTCTCTGGGAACGCTaGCTTTTCTTCCCCACACTT | + |
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Preference number: 4 (lower is better) Translates to: ARKAGNLDRGTIFPSLASTLWER*LFFPTL Trigger: AAGTGTGGGGAAGAAAAGTCAGCGTTCCCAGAGAGT...AGAGGCCAAGCTTGGAAAAATTGTTCCCCTGTCCAGGTTCCCTGCCTTTCTAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000090986.11 |
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| CDS-3UTR CCA 90 bp | TACCAGATGGAAGCCCAGGCACATGTATGTGATCCTCACTTGCGCCACCTCTGCTTCATCAACTGCTGGTaGATACAGCATGGCTATAGG | + |
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Preference number: 4 (lower is better) Translates to: YQMEAQAHVCDPHLRHLCFINCW*IQHGYR Trigger: CCTATAGCCATGCTGTATCCACCAGCAGTTGATGAA...GCAGAGGTGGCGCAAGTGAGGATCACATACATGTGCCTGGGCTTCCATCTGGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090986.11 |
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| CDS-3UTR CCA 90 bp | AGGGACTCGGGCTTTCTTTGGAGCTTTTGGAACATTATCTCAGAGCAGATTAATCCCTTCAACGACCAGTaGCTCCCCTTCAACTCCCCA | + |
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Preference number: 4 (lower is better) Translates to: RDSGFLWSFWNIISEQINPFNDQ*LPFNSP Trigger: TGGGGAGTTGAAGGGGAGCCACTGGTCGTTGAAGGG...ATTAATCTGCTCTGAGATAATGTTCCAAAAGCTCCAAAGAAAGCCCGAGTCCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000090986.11 |
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| CDS-3UTR CCA 90 bp | AGGGACTCGGGCTTTCTTTGGAGCTTTTGGAACATTATCTCAGAGCAGATTAATGCTATAGGTGTGTGTTaGGCTGCTCCACAGCCCAGC | + |
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Preference number: 4 (lower is better) Translates to: RDSGFLWSFWNIISEQINAIGVC*AAPQPS Trigger: GCTGGGCTGTGGAGCAGCCCAACACACACCTATAGC...ATTAATCTGCTCTGAGATAATGTTCCAAAAGCTCCAAAGAAAGCCCGAGTCCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090986.11 |
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| CDS-3UTR TCA 90 bp | TACCAGATGGAAGCCCAGGCACATGTATGTGATCCTCACTTGCGCCACCTCTGCTGTGATATCCATCCTTaGAGTACTTCAGTCTCTTTA | + |
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Preference number: 4 (lower is better) Translates to: YQMEAQAHVCDPHLRHLCCDIHP*STSVSL Trigger: TAAAGAGACTGAAGTACTTCAAGGATGGATATCACA...GCAGAGGTGGCGCAAGTGAGGATCACATACATGTGCCTGGGCTTCCATCTGGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090986.11 |
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| CDS-3UTR TCA 90 bp | AGGGACTCGGGCTTTCTTTGGAGCTTTTGGAACATTATCTCAGAGCAGATTAATAACTCCCCAGCCTCTTaGAGGCTGGATCTCCATGGT | + |
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Preference number: 4 (lower is better) Translates to: RDSGFLWSFWNIISEQINNSPAS*RLDLHG Trigger: ACCATGGAGATCCAGCCTTCAAGAGGCTGGGGAGTT...ATTAATCTGCTCTGAGATAATGTTCCAAAAGCTCCAAAGAAAGCCCGAGTCCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090986.11 |
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| CDS-3UTR TCA 90 bp | GTTTCTTTTGTTGTATGTGCTTTGTTAGACCACATTCTACCAGATGGAAGCCCATTGCACAGGGCTACCTaGATGAGCACAGGCAGAGCT | + |
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Preference number: 4 (lower is better) Translates to: VSFVVCALLDHILPDGSPLHRAT*MSTGRA Trigger: AGCTCTGCCTGTGCTCATTCAGGTAGCCCTGTGCAA...TGGGCTTCCATCTGGTAGAATGTGGTCTAACAAAGCACATACAACAAAAGAAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090986.11 |
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| CDS-3UTR GCA 90 bp | CCCATGTCAAGAAATGAACACGCACTGAGAGTTTCTTTTGTTGTATGTGCTTTGAAGGGAGCCAGGTGTTaGAGGACAGGGTCACTGAAC | + |
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Preference number: 4 (lower is better) Translates to: PMSRNEHALRVSFVVCALKGARC*RTGSLN Trigger: GTTCAGTGACCCTGTCCTGCAACACCTGGCTCCCTT...CAAAGCACATACAACAAAAGAAACTCTCAGTGCGTGTTCATTTCTTGACATGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090986.11 |
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| CDS-3UTR TCA 90 bp | TCAAGAAATGAACACGCACTGAGAGTTTCTTTTGTTGTATGTGCTTTGTTAGACAGACCCCAGGAACACTaGTGGAGAGGAGCGGGTTCA | + |
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Preference number: 4 (lower is better) Translates to: SRNEHALRVSFVVCALLDRPQEH*WRGAGS Trigger: TGAACCCGCTCCTCTCCATCAGTGTTCCTGGGGTCT...GTCTAACAAAGCACATACAACAAAAGAAACTCTCAGTGCGTGTTCATTTCTTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090986.11 |
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| CDS-3UTR TCA 90 bp | GGCTTTCTTTGGAGCTTTTGGAACATTATCTCAGAGCAGATTAATATAGTTTTGCCGCCACATCTCCGATaGAGGGCAAGACCCCAGGAA | + |
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Preference number: 4 (lower is better) Translates to: GFLWSFWNIISEQINIVLPPHLR*RARPQE Trigger: TTCCTGGGGTCTTGCCCTTCATCGGAGATGTGGCGG...CAAAACTATATTAATCTGCTCTGAGATAATGTTCCAAAAGCTCCAAAGAAAGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000090986.11 |
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| CDS-3UTR CCA 90 bp | TTTTGTTGTATGTGCTTTGTTAGACCACATTCTACCAGATGGAAGCCCAGGCACGCTGGAAACAGCTCTTaGACATTCAGCCACTTAGAT | + |
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Preference number: 4 (lower is better) Translates to: FCCMCFVRPHSTRWKPRHAGNSS*TFSHLD Trigger: ATCTAAGTGGCTGAATGTCCAAGAGCTGTTTCCAGC...GTGCCTGGGCTTCCATCTGGTAGAATGTGGTCTAACAAAGCACATACAACAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090986.11 |
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| CDS-3UTR CCA 90 bp | AGGGACTCGGGCTTTCTTTGGAGCTTTTGGAACATTATCTCAGAGCAGATTAATTTCATAAGAACGGTGTaGAAGGCTGATGCTCAACCA | + |
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Preference number: 4 (lower is better) Translates to: RDSGFLWSFWNIISEQINFIRTV*KADAQP Trigger: TGGTTGAGCATCAGCCTTCCACACCGTTCTTATGAA...ATTAATCTGCTCTGAGATAATGTTCCAAAAGCTCCAAAGAAAGCCCGAGTCCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090986.11 |
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| CDS-3UTR TCA 90 bp | GGCTTTCTTTGGAGCTTTTGGAACATTATCTCAGAGCAGATTAATATAGTTTTGGCTGGATCTCCATGGTaGCTTGAGATACAGGGATCC | + |
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Preference number: 4 (lower is better) Translates to: GFLWSFWNIISEQINIVLAGSPW*LEIQGS Trigger: GGATCCCTGTATCTCAAGTCACCATGGAGATCCAGC...CAAAACTATATTAATCTGCTCTGAGATAATGTTCCAAAAGCTCCAAAGAAAGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090986.11 |
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| CDS-3UTR CCA 90 bp | CCCATGTCAAGAAATGAACACGCACTGAGAGTTTCTTTTGTTGTATGTGCTTTGCCCGATTGCAAAGTGTaGCCATCTTTGAAGAAGGAA | + |
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Preference number: 4 (lower is better) Translates to: PMSRNEHALRVSFVVCALPDCKV*PSLKKE Trigger: TTCCTTCTTCAAAGATGGCCACACTTTGCAATCGGG...CAAAGCACATACAACAAAAGAAACTCTCAGTGCGTGTTCATTTCTTGACATGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090986.11 |
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| CDS-3UTR GCA 90 bp | TCAAGAAATGAACACGCACTGAGAGTTTCTTTTGTTGTATGTGCTTTGTTAGACTCTGCTTTGAGACACTaGGAGAGGCAGTCATTGCTT | + |
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Preference number: 4 (lower is better) Translates to: SRNEHALRVSFVVCALLDSALRH*ERQSLL Trigger: AAGCAATGACTGCCTCTCGCAGTGTCTCAAAGCAGA...GTCTAACAAAGCACATACAACAAAAGAAACTCTCAGTGCGTGTTCATTTCTTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090986.11 |
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| CDS GCA 90 bp | AATAGCGTAGCTGGGTCGTTGCCCTATCTGAAGGGAGCCAGGTGTTaGAGGACAGGGTCACTGAACTCCCCTCTACGGGCTGCAGGGGGC | + |
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Preference number: 5 (lower is better) Translates to: NSVAGSLPYLKGARC*RTGSLNSPLRAAGG Trigger: GCCCCCTGCAGCCCGTAGAGGGGAGTTCAGTGACCCTGTCCTGCAACACCTGGCTCCCTTCAGATAGGGCAACGACCCAGCTACGCTATT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000090986.11 ENSMUST00000146512.2 |
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| CDS-3UTR CAA 90 bp | TGGAAGCCCAGGCACATGTATGTGATCCTCACTTGCGCCACCTCTGCGCACGTCCAACTCCCCAGCCTCTaGAAGGCTGGATCTCCATGG | + |
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Preference number: 5 (lower is better) Translates to: WKPRHMYVILTCATSAHVQLPSL*KAGSPW Trigger: CCATGGAGATCCAGCCTTCAAGAGGCTGGGGAGTTG...GACGTGCGCAGAGGTGGCGCAAGTGAGGATCACATACATGTGCCTGGGCTTCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090986.11 |
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| CDS-3UTR CAA 90 bp | ATGGAAGCCCAGGCACATGTATGTGATCCTCACTTGCGCCACCTCTGCGCACGTGGCTATAGGTGTGTGTaGGGCTGCTCCACAGCCCAG | + |
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Preference number: 5 (lower is better) Translates to: MEAQAHVCDPHLRHLCARGYRCV*GCSTAQ Trigger: CTGGGCTGTGGAGCAGCCCAACACACACCTATAGCC...ACGTGCGCAGAGGTGGCGCAAGTGAGGATCACATACATGTGCCTGGGCTTCCAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090986.11 |
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| CDS-3UTR CAA 90 bp | GCTAGAAAGGCAGGGAACCTGGACAGGGGAACAATTTTTCCAAGCTTGGCCTCTGAAGGGAGCCAGGTGTaGCAGGACAGGGTCACTGAA | + |
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Preference number: 5 (lower is better) Translates to: ARKAGNLDRGTIFPSLASEGSQV*QDRVTE Trigger: TTCAGTGACCCTGTCCTGCAACACCTGGCTCCCTTC...AGAGGCCAAGCTTGGAAAAATTGTTCCCCTGTCCAGGTTCCCTGCCTTTCTAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090986.11 |
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| CDS-3UTR CAA 90 bp | TGGGGGCAAGGGACTCGGGCTTTCTTTGGAGCTTTTGGAACATTATCTCAGAGCACCACCTCACTGCGCTaGGTACCCCAGGCGTTTTCA | + |
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Preference number: 5 (lower is better) Translates to: WGQGTRAFFGAFGTLSQSTTSLR*VPQAFS Trigger: TGAAAACGCCTGGGGTACCAAGCGCAGTGAGGTGGT...GCTCTGAGATAATGTTCCAAAAGCTCCAAAGAAAGCCCGAGTCCCTTGCCCCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000090986.11 |
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| CDS TCA 90 bp | CTTTCCCTGATAGTAGGGATCTCCAGCTCCACTCTCTGGGAACGCTaGCTTTTCTTCCCCACACTTTCCTTAGTGTCCTGCCTATGCCAG | + |
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Preference number: 5 (lower is better) Translates to: LSLIVGISSSTLWER*LFFPTLSLVSCLCQ Trigger: CTGGCATAGGCAGGACACTAAGGAAAGTGTGGGGAAGAAAAGTCAGCGTTCCCAGAGAGTGGAGCTGGAGATCCCTACTATCAGGGAAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090986.11 |
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| CDS TCA 90 bp | TCACATTCAGCCAGGGTCTTTTCTGTGCCATTGCACAGGGCTACCTaGATGAGCACAGGCAGAGCTTCATCAACTGCTGGTGGATACAGC | + |
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Preference number: 5 (lower is better) Translates to: SHSARVFSVPLHRAT*MSTGRASSTAGGYS Trigger: GCTGTATCCACCAGCAGTTGATGAAGCTCTGCCTGTGCTCATTCAGGTAGCCCTGTGCAATGGCACAGAAAAGACCCTGGCTGAATGTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090986.11 |
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| CDS CCA 90 bp | ACAGCTCCAGCATCCTCATCATGTCCACAATCAAAGGCCTCAACCTaGTCACATTCAGCCAGGGTCTTTTCTGTGCCATTGCACAGGGCT | + |
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Preference number: 5 (lower is better) Translates to: TAPASSSCPQSKAST*SHSARVFSVPLHRA Trigger: AGCCCTGTGCAATGGCACAGAAAAGACCCTGGCTGAATGTGACCAGGTTGAGGCCTTTGATTGTGGACATGATGAGGATGCTGGAGCTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090986.11 |
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| CDS-3UTR CAA 90 bp | GCTAGAAAGGCAGGGAACCTGGACAGGGGAACAATTTTTCCAAGCTTGGCCTCTTGCGAGAGGCAGTCATaGCTTCACACCAGTAATTTC | + |
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Preference number: 5 (lower is better) Translates to: ARKAGNLDRGTIFPSLASCERQS*LHTSNF Trigger: GAAATTACTGGTGTGAAGCAATGACTGCCTCTCGCA...AGAGGCCAAGCTTGGAAAAATTGTTCCCCTGTCCAGGTTCCCTGCCTTTCTAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090986.11 |
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| CDS TCA 90 bp | ATAGGAGCCACTGTCACCGCGTCTTGCATTCCTAATGGTGTAGCTTaGAGCACTGCTGTAAGTTTCTATGTGATATCCATCCTTGAAGTA | + |
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Preference number: 5 (lower is better) Translates to: IGATVTASCIPNGVA*STAVSFYVISILEV Trigger: TACTTCAAGGATGGATATCACATAGAAACTTACAGCAGTGCTTCAAGCTACACCATTAGGAATGCAAGACGCGGTGACAGTGGCTCCTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090986.11 ENSMUST00000146512.2 |
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| CDS TCA 90 bp | TGTAGCTTGAAGCACTGCTGTAAGTTTCTATGTGATATCCATCCTTaGAGTACTTCAGTCTCTTTATGTCACCATTATTTTTCCCTGTGC | + |
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Preference number: 5 (lower is better) Translates to: CSLKHCCKFLCDIHP*STSVSLCHHYFSLC Trigger: GCACAGGGAAAAATAATGGTGACATAAAGAGACTGAAGTACTTCAAGGATGGATATCACATAGAAACTTACAGCAGTGCTTCAAGCTACA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000090986.11 ENSMUST00000146512.2 |
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| CDS GCA 72 bp | GCTGGGTCGTTGCCCTATCTGAAGGGAGCCAGGTGTTaGAGGACAGGGTCACTGAACTCCCCTCTACGGGCT | + |
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Preference number: 6 (lower is better) Translates to: AGSLPYLKGARC*RTGSLNSPLRA Trigger: AGCCCGTAGAGGGGAGTTCAGTGACCCTGTCCTGCAACACCTGGCTCCCTTCAGATAGGGCAACGACCCAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090986.11 ENSMUST00000146512.2 |
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| CDS CAA 72 bp | AGCTGGGTCGTTGCCCTATCTGAAGGGAGCCAGGTGTaGCAGGACAGGGTCACTGAACTCCCCTCTACGGGC | + |
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Preference number: 6 (lower is better) Translates to: SWVVALSEGSQV*QDRVTELPSTG Trigger: GCCCGTAGAGGGGAGTTCAGTGACCCTGTCCTGCAACACCTGGCTCCCTTCAGATAGGGCAACGACCCAGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090986.11 ENSMUST00000146512.2 |
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| CDS CCA 72 bp | CCTTCCTGTTCAACCTCTACGCGTCCTTCACAGTGGTaGGGGCCATTCACCAAACGCACTTTGGGTGGGGGC | + |
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Preference number: 6 (lower is better) Translates to: PSCSTSTRPSQW*GPFTKRTLGGG Trigger: GCCCCCACCCAAAGTGCGTTTGGTGAATGGCCCCCACCACTGTGAAGGACGCGTAGAGGTTGAACAGGAAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090986.11 |
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| CDS CCA 72 bp | CGACCTTCCTGTTCAACCTCTACGCGTCCTTCACAGTaGTGGGGGCCATTCACCAAACGCACTTTGGGTGGG | + |
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Preference number: 6 (lower is better) Translates to: RPSCSTSTRPSQ*WGPFTKRTLGG Trigger: CCCACCCAAAGTGCGTTTGGTGAATGGCCCCCACCACTGTGAAGGACGCGTAGAGGTTGAACAGGAAGGTCG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090986.11 |
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| CDS CAA 72 bp | CCTTCACAGTGGTGGGGGCCATTCACCAAACGCACTTaGGGTGGGGGCTCTGTGACATTGAGCGTTACCACC | + |
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Preference number: 6 (lower is better) Translates to: PSQWWGPFTKRT*GGGSVTLSVTT Trigger: GGTGGTAACGCTCAATGTCACAGAGCCCCCACCCAAAGTGCGTTTGGTGAATGGCCCCCACCACTGTGAAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000090986.11 |
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| CDS TCA 72 bp | GCCAGGGTCTTTTCTGTGCCATTGCACAGGGCTACCTaGATGAGCACAGGCAGAGCTTCATCAACTGCTGGT | + |
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Preference number: 6 (lower is better) Translates to: ARVFSVPLHRAT*MSTGRASSTAG Trigger: ACCAGCAGTTGATGAAGCTCTGCCTGTGCTCATTCAGGTAGCCCTGTGCAATGGCACAGAAAAGACCCTGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090986.11 |
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| CDS TCA 72 bp | GGGTCTTTTCTGTGCCATTGCACAGGGCTACCTGAATaGGCACAGGCAGAGCTTCATCAACTGCTGGTGGAT | + |
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Preference number: 6 (lower is better) Translates to: GSFLCHCTGLPE*AQAELHQLLVD Trigger: ATCCACCAGCAGTTGATGAAGCTCTGCCTGTGCTCATTCAGGTAGCCCTGTGCAATGGCACAGAAAAGACCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090986.11 |
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| CDS CCA 72 bp | CTGAATGAGCACAGGCAGAGCTTCATCAACTGCTGGTaGATACAGCATGGCTATAGGTGTGTGTTGGGCTGC | + |
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Preference number: 6 (lower is better) Translates to: LNEHRQSFINCW*IQHGYRCVLGC Trigger: GCAGCCCAACACACACCTATAGCCATGCTGTATCCACCAGCAGTTGATGAAGCTCTGCCTGTGCTCATTCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090986.11 |
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| CDS TCA 72 bp | ATAGTAGGGATCTCCAGCTCCACTCTCTGGGAACGCTaGCTTTTCTTCCCCACACTTTCCTTAGTGTCCTGC | + |
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Preference number: 6 (lower is better) Translates to: IVGISSSTLWER*LFFPTLSLVSC Trigger: GCAGGACACTAAGGAAAGTGTGGGGAAGAAAAGTCAGCGTTCCCAGAGAGTGGAGCTGGAGATCCCTACTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090986.11 |
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| CDS GCA 72 bp | GGCTACCTGAATGAGCACAGGCAGAGCTTCATCAACTaGTGGTGGATACAGCATGGCTATAGGTGTGTGTTG | + |
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Preference number: 6 (lower is better) Translates to: GYLNEHRQSFIN*WWIQHGYRCVL Trigger: CAACACACACCTATAGCCATGCTGTATCCACCAGCAGTTGATGAAGCTCTGCCTGTGCTCATTCAGGTAGCC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090986.11 |
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| CDS CCA 72 bp | TACCTGAATGAGCACAGGCAGAGCTTCATCAACTGCTaGTGGATACAGCATGGCTATAGGTGTGTGTTGGGC | + |
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Preference number: 6 (lower is better) Translates to: YLNEHRQSFINC*WIQHGYRCVLG Trigger: GCCCAACACACACCTATAGCCATGCTGTATCCACCAGCAGTTGATGAAGCTCTGCCTGTGCTCATTCAGGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090986.11 |
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| CDS TCA 72 bp | CAACTCCCCAGCCTCTTGAAGGCTGGATCTCCATGGTaGCTTGAGATACAGGGATCCTCTCTACATCTATGT | + |
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Preference number: 6 (lower is better) Translates to: QLPSLLKAGSPW*LEIQGSSLHLC Trigger: ACATAGATGTAGAGAGGATCCCTGTATCTCAAGTCACCATGGAGATCCAGCCTTCAAGAGGCTGGGGAGTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090986.11 |
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| CDS CCA 72 bp | GCTTATAACTACTTGGTCTCCTTCATAAGAACGGTGTaGAAGGCTGATGCTCAACCAGTCGGACTGGACTCC | + |
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Preference number: 6 (lower is better) Translates to: AYNYLVSFIRTV*KADAQPVGLDS Trigger: GGAGTCCAGTCCGACTGGTTGAGCATCAGCCTTCCACACCGTTCTTATGAAGGAGACCAAGTAGTTATAAGC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090986.11 ENSMUST00000146512.2 |
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| CDS CCA 72 bp | GCATCCTCATCATGTCCACAATCAAAGGCCTCAACCTaGTCACATTCAGCCAGGGTCTTTTCTGTGCCATTG | + |
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Preference number: 6 (lower is better) Translates to: ASSSCPQSKAST*SHSARVFSVPL Trigger: CAATGGCACAGAAAAGACCCTGGCTGAATGTGACCAGGTTGAGGCCTTTGATTGTGGACATGATGAGGATGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090986.11 |
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| CDS CAA 72 bp | GGTGACTCTGCTTTGAGACACTGCGAGAGGCAGTCATaGCTTCACACCAGTAATTTCCTGAGTCTTCCTTCG | + |
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Preference number: 6 (lower is better) Translates to: GDSALRHCERQS*LHTSNFLSLPS Trigger: CGAAGGAAGACTCAGGAAATTACTGGTGTGAAGCAATGACTGCCTCTCGCAGTGTCTCAAAGCAGAGTCACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090986.11 |
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| CDS CAA 90 bp | TGTAGGACCGGTGACTCTGCTTTGAGACACTGCGAGAGGCAGTCATaGCTTCACACCAGTAATTTCCTGAGTCTTCCTTCGATATTGCTG | + |
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Preference number: 6 (lower is better) Translates to: CRTGDSALRHCERQS*LHTSNFLSLPSILL Trigger: CAGCAATATCGAAGGAAGACTCAGGAAATTACTGGTGTGAAGCAATGACTGCCTCTCGCAGTGTCTCAAAGCAGAGTCACCGGTCCTACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090986.11 |
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| CDS GCA 72 bp | CATCTATGTAGGACCGGTGACTCTGCTTTGAGACACTaGGAGAGGCAGTCATTGCTTCACACCAGTAATTTC | + |
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Preference number: 6 (lower is better) Translates to: HLCRTGDSALRH*ERQSLLHTSNF Trigger: GAAATTACTGGTGTGAAGCAATGACTGCCTCTCGCAGTGTCTCAAAGCAGAGTCACCGGTCCTACATAGATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090986.11 |
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| CDS GCA 72 bp | GTTCAACACTGGAATTTTCACGGTGATGTTCACGATTaGACTCTGGATCAGGCCGTAGTTGTTGTCTGCTGT | + |
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Preference number: 6 (lower is better) Translates to: VQHWNFHGDVHD*TLDQAVVVVCC Trigger: ACAGCAGACAACAACTACGGCCTGATCCAGAGTGCAATCGTGAACATCACCGTGAAAATTCCAGTGTTGAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090986.11 |
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| CDS TCA 72 bp | ACTGTCACCGCGTCTTGCATTCCTAATGGTGTAGCTTaGAGCACTGCTGTAAGTTTCTATGTGATATCCATC | + |
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Preference number: 6 (lower is better) Translates to: TVTASCIPNGVA*STAVSFYVISI Trigger: GATGGATATCACATAGAAACTTACAGCAGTGCTTCAAGCTACACCATTAGGAATGCAAGACGCGGTGACAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090986.11 ENSMUST00000146512.2 |
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| CDS GCA 72 bp | CAGAGAGAGCTTAAAGGATGCCTTTCCTCCAAAAGGTaGCGAGGTGTTAGCCAGAGTGATATTTTCATGATA | + |
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Preference number: 6 (lower is better) Translates to: QRELKGCLSSKR*RGVSQSDIFMI Trigger: TATCATGAAAATATCACTCTGGCTAACACCTCGGCACCTTTTGGAGGAAAGGCATCCTTTAAGCTCTCTCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090986.11 |
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| CDS TCA 72 bp | AAGCACTGCTGTAAGTTTCTATGTGATATCCATCCTTaGAGTACTTCAGTCTCTTTATGTCACCATTATTTT | + |
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Preference number: 6 (lower is better) Translates to: KHCCKFLCDIHP*STSVSLCHHYF Trigger: AAAATAATGGTGACATAAAGAGACTGAAGTACTTCAAGGATGGATATCACATAGAAACTTACAGCAGTGCTT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090986.11 ENSMUST00000146512.2 |
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