RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FCRLB (Mus musculus)

Ensembl gene IDs: ENSMUSG00000070524

Ensembl transcript IDs: ENSMUST00000094337.2

Found 52 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS CCA 90 bp TTCGCGCGACTGCTCCGCGGACGCTGGCAGGGGCGCGCAGGCGTGTaGCCCGGCGGTGGCAACATGGCCCGCGGGGAACTGCAGCCCTGC +
Preference number: 5 (lower is better)
Translates to: FARLLRGRWQGRAGV*PGGGNMARGELQPC
Trigger: GCAGGGCTGCAGTTCCCCGCGGGCCATGTTGCCACCGCCGGGCCACACGCCTGCGCGCCCCTGCCAGCGTCCGCGGAGCAGTCGCGCGAA
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000094337.2
CDS CCA 90 bp GCTCCGCGGACGCTGGCAGGGGCGCGCAGGCGTGTGGCCCGGCGGTaGCAACATGGCCCGCGGGGAACTGCAGCCCTGCAAAGGTGCTGT +
Preference number: 5 (lower is better)
Translates to: APRTLAGARRRVARR*QHGPRGTAALQRCC
Trigger: ACAGCACCTTTGCAGGGCTGCAGTTCCCCGCGGGCCATGTTGCCACCGCCGGGCCACACGCCTGCGCGCCCCTGCCAGCGTCCGCGGAGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000094337.2
CDS CCA 90 bp GACGCTGGCAGGGGCGCGCAGGCGTGTGGCCCGGCGGTGGCAACATaGCCCGCGGGGAACTGCAGCCCTGCAAAGGTGCTGTTCGGGATG +
Preference number: 5 (lower is better)
Translates to: DAGRGAQACGPAVAT*PAGNCSPAKVLFGM
Trigger: CATCCCGAACAGCACCTTTGCAGGGCTGCAGTTCCCCGCGGGCCATGTTGCCACCGCCGGGCCACACGCCTGCGCGCCCCTGCCAGCGTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000094337.2
CDS GCA 90 bp TGCAGGCGCGTCTCGCAGCGCAGCACCACGCGGCCGCGCGCCTCCTaGGGGCTTAACGTCCTCAGCACCGGTGTCTGGAACAGCTCTTGC +
Preference number: 5 (lower is better)
Translates to: CRRVSQRSTTRPRAS*GLNVLSTGVWNSSC
Trigger: GCAAGAGCTGTTCCAGACACCGGTGCTGAGGACGTTAAGCCCGCAGGAGGCGCGCGGCCGCGTGGTGCTGCGCTGCGAGACGCGCCTGCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094337.2
CDS TCA 90 bp CCTTTGAGCAGCTGCATCTCGCGAAGCAGGAGGTCCACCTTGGGCTaGAGAGCTTCGCGCGACTGCTCCGCGGACGCTGGCAGGGGCGCG +
Preference number: 5 (lower is better)
Translates to: PLSSCISRSRRSTLG*RASRDCSADAGRGA
Trigger: CGCGCCCCTGCCAGCGTCCGCGGAGCAGTCGCGCGAAGCTCTTCAGCCCAAGGTGGACCTCCTGCTTCGCGAGATGCAGCTGCTCAAAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094337.2
CDS CCA 90 bp GCCCAGGGAGCTGCAGCCACGGGCTGCGTTTCCGTACACTCCGGCTaGTGGTGGCGGCCTCACACCAGTACGATTCGAGCTCCTCGACCT +
Preference number: 5 (lower is better)
Translates to: AQGAAATGCVSVHSG*WWRPHTSTIRAPRP
Trigger: AGGTCGAGGAGCTCGAATCGTACTGGTGTGAGGCCGCCACCACCAGCCGGAGTGTACGGAAACGCAGCCCGTGGCTGCAGCTCCCTGGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094337.2
CDS CCA 90 bp GGAGCTGCAGCCACGGGCTGCGTTTCCGTACACTCCGGCTGGTGGTaGCGGCCTCACACCAGTACGATTCGAGCTCCTCGACCTCGGACT +
Preference number: 5 (lower is better)
Translates to: GAAATGCVSVHSGWW*RPHTSTIRAPRPRT
Trigger: AGTCCGAGGTCGAGGAGCTCGAATCGTACTGGTGTGAGGCCGCCACCACCAGCCGGAGTGTACGGAAACGCAGCCCGTGGCTGCAGCTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094337.2
CDS GCA 90 bp TCCTGCGGGCTTAACGTCCTCAGCACCGGTGTCTGGAACAGCTCTTaGACGGTCACGGCCACCTTGGAGGAGAACATGGGCGCACTCTCC +
Preference number: 5 (lower is better)
Translates to: SCGLNVLSTGVWNSS*TVTATLEENMGALS
Trigger: GGAGAGTGCGCCCATGTTCTCCTCCAAGGTGGCCGTGACCGTGCAAGAGCTGTTCCAGACACCGGTGCTGAGGACGTTAAGCCCGCAGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094337.2
CDS CCA 90 bp GGTGCCTGCACCTCGATGCTCTTCTTGTGGGAAGGCAGGAGGACATaGCCCAGGTACCAGAGAGTGCTAATGGGCCGGAGCTCCAGCAGC +
Preference number: 5 (lower is better)
Translates to: GACTSMLFLWEGRRT*PRYQRVLMGRSSSS
Trigger: GCTGCTGGAGCTCCGGCCCATTAGCACTCTCTGGTACCTGGGCCATGTCCTCCTGCCTTCCCACAAGAAGAGCATCGAGGTGCAGGCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094337.2
CDS CCA 90 bp CACGGTCACGGCCACCTTGGAGGAGAACATGGGCGCACTCTCCACTaGGATACGCATGGTGCCAGAGCACTGGTAGTGACCGCTGTCGCT +
Preference number: 5 (lower is better)
Translates to: HGHGHLGGEHGRTLH*DTHGARALVVTAVA
Trigger: AGCGACAGCGGTCACTACCAGTGCTCTGGCACCATGCGTATCCCAGTGGAGAGTGCGCCCATGTTCTCCTCCAAGGTGGCCGTGACCGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094337.2
CDS TCA 90 bp CCTGTGGGTCCTTTAATCCCAGGACCACGCGGCTCAGAAGGCCTTTaGGCAGCTGCATCTCGCGAAGCAGGAGGTCCACCTTGGGCTGAA +
Preference number: 5 (lower is better)
Translates to: PVGPLIPGPRGSEGL*AAASREAGGPPWAE
Trigger: TTCAGCCCAAGGTGGACCTCCTGCTTCGCGAGATGCAGCTGCTCAAAGGCCTTCTGAGCCGCGTGGTCCTGGGATTAAAGGACCCACAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094337.2
CDS CCA 90 bp TCTGGAACAGCTCTTGCACGGTCACGGCCACCTTGGAGGAGAACATaGGCGCACTCTCCACTGGGATACGCATGGTGCCAGAGCACTGGT +
Preference number: 5 (lower is better)
Translates to: SGTALARSRPPWRRT*AHSPLGYAWCQSTG
Trigger: ACCAGTGCTCTGGCACCATGCGTATCCCAGTGGAGAGTGCGCCCATGTTCTCCTCCAAGGTGGCCGTGACCGTGCAAGAGCTGTTCCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094337.2
CDS TCA 90 bp GGGGAACTGCAGCCCTGCAAAGGTGCTGTTCGGGATGGAAGTGACTaGCTGAACGGATCTGGACACTGGGGTCTTCCGGAAGGAAAGCGG +
Preference number: 5 (lower is better)
Translates to: GELQPCKGAVRDGSD*LNGSGHWGLPEGKR
Trigger: CCGCTTTCCTTCCGGAAGACCCCAGTGTCCAGATCCGTTCAGTCAGTCACTTCCATCCCGAACAGCACCTTTGCAGGGCTGCAGTTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000094337.2
CDS TCA 90 bp CCGCGGGGAACTGCAGCCCTGCAAAGGTGCTGTTCGGGATGGAAGTaGCTGACTGAACGGATCTGGACACTGGGGTCTTCCGGAAGGAAA +
Preference number: 5 (lower is better)
Translates to: PRGTAALQRCCSGWK*LTERIWTLGSSGRK
Trigger: TTTCCTTCCGGAAGACCCCAGTGTCCAGATCCGTTCAGTCAGTCACTTCCATCCCGAACAGCACCTTTGCAGGGCTGCAGTTCCCCGCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000094337.2
CDS CCA 90 bp AGGATCACTGACGGGTGCTCCTCGTGTCTGACATCGATACACCCCTaGTGCCTGCACCTCGATGCTCTTCTTGTGGGAAGGCAGGAGGAC +
Preference number: 5 (lower is better)
Translates to: RITDGCSSCLTSIHP*CLHLDALLVGRQED
Trigger: GTCCTCCTGCCTTCCCACAAGAAGAGCATCGAGGTGCAGGCACCAGGGGTGTATCGATGTCAGACACGAGGAGCACCCGTCAGTGATCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094337.2
CDS GCA 90 bp ATCACTGACGGGTGCTCCTCGTGTCTGACATCGATACACCCCTGGTaGCTGCACCTCGATGCTCTTCTTGTGGGAAGGCAGGAGGACATG +
Preference number: 5 (lower is better)
Translates to: ITDGCSSCLTSIHPW*LHLDALLVGRQEDM
Trigger: CATGTCCTCCTGCCTTCCCACAAGAAGAGCATCGAGGTGCAGGCACCAGGGGTGTATCGATGTCAGACACGAGGAGCACCCGTCAGTGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094337.2
CDS TCA 90 bp GACACAGAGAGGTGGATAGGATCACTGACGGGTGCTCCTCGTGTCTaGCATCGATACACCCCTGGTGCCTGCACCTCGATGCTCTTCTTG +
Preference number: 5 (lower is better)
Translates to: DTERWIGSLTGAPRV*HRYTPGACTSMLFL
Trigger: CAAGAAGAGCATCGAGGTGCAGGCACCAGGGGTGTATCGATGTCAGACACGAGGAGCACCCGTCAGTGATCCTATCCACCTCTCTGTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094337.2
CDS TCA 90 bp AACTGCAGCCCTGCAAAGGTGCTGTTCGGGATGGAAGTGACTGACTaGACGGATCTGGACACTGGGGTCTTCCGGAAGGAAAGCGGCTTG +
Preference number: 5 (lower is better)
Translates to: NCSPAKVLFGMEVTD*TDLDTGVFRKESGL
Trigger: CAAGCCGCTTTCCTTCCGGAAGACCCCAGTGTCCAGATCCGTTCAGTCAGTCACTTCCATCCCGAACAGCACCTTTGCAGGGCTGCAGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094337.2
CDS CCA 90 bp AGGTACCAGAGAGTGCTAATGGGCCGGAGCTCCAGCAGCAGAGGGTaGTATCCATCACATCTCAGGGTTACTCGCTCTCCCTTGAAGATG +
Preference number: 5 (lower is better)
Translates to: RYQRVLMGRSSSSRG*YPSHLRVTRSPLKM
Trigger: CATCTTCAAGGGAGAGCGAGTAACCCTGAGATGTGATGGATACCACCCTCTGCTGCTGGAGCTCCGGCCCATTAGCACTCTCTGGTACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094337.2
CDS GCA 90 bp CGCATCACCAAGGGCTCTCCCTCGAACACCGCAGCATACGGCACTTaGAGAATTAGCCAGTCGTTAGACACAGAGAGGTGGATAGGATCA +
Preference number: 5 (lower is better)
Translates to: RITKGSPSNTAAYGT*RISQSLDTERWIGS
Trigger: TGATCCTATCCACCTCTCTGTGTCTAACGACTGGCTAATTCTGCAAGTGCCGTATGCTGCGGTGTTCGAGGGAGAGCCCTTGGTGATGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094337.2
CDS CCA 72 bp ACGCTGGCAGGGGCGCGCAGGCGTGTGGCCCGGCGGTaGCAACATGGCCCGCGGGGAACTGCAGCCCTGCAA +
Preference number: 6 (lower is better)
Translates to: TLAGARRRVARR*QHGPRGTAALQ
Trigger: TTGCAGGGCTGCAGTTCCCCGCGGGCCATGTTGCCACCGCCGGGCCACACGCCTGCGCGCCCCTGCCAGCGT
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000094337.2
CDS GCA 72 bp AAGGCGAACTGCAGCGGCGTGTCCCGCTTCTGCGGGTaGAGGCGCGTCTCGCAGCGCAGCACCACGCGGCCG +
Preference number: 6 (lower is better)
Translates to: KANCSGVSRFCG*RRVSQRSTTRP
Trigger: CGGCCGCGTGGTGCTGCGCTGCGAGACGCGCCTGCACCCGCAGAAGCGGGACACGCCGCTGCAGTTCGCCTT
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094337.2
CDS CCA 72 bp GCCCCAAGGCTGCAGCCTGTGCGACTGGCGCGGTGGTaGACGCCAGATCCAGGACAGGGCCCCGCCCAGGGA +
Preference number: 6 (lower is better)
Translates to: APRLQPVRLARW*TPDPGQGPAQG
Trigger: TCCCTGGGCGGGGCCCTGTCCTGGATCTGGCGTCCACCACCGCGCCAGTCGCACAGGCTGCAGCCTTGGGGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000094337.2
CDS CCA 72 bp AGGGGCGCGCAGGCGTGTGGCCCGGCGGTGGCAACATaGCCCGCGGGGAACTGCAGCCCTGCAAAGGTGCTG +
Preference number: 6 (lower is better)
Translates to: RGAQACGPAVAT*PAGNCSPAKVL
Trigger: CAGCACCTTTGCAGGGCTGCAGTTCCCCGCGGGCCATGTTGCCACCGCCGGGCCACACGCCTGCGCGCCCCT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000094337.2
CDS GCA 72 bp CCGGAAGGAAAGCGGCTTGTCCCCCGGCCCCAAGGCTaGAGCCTGTGCGACTGGCGCGGTGGTGGACGCCAG +
Preference number: 6 (lower is better)
Translates to: PEGKRLVPRPQG*SLCDWRGGGRQ
Trigger: CTGGCGTCCACCACCGCGCCAGTCGCACAGGCTGCAGCCTTGGGGCCGGGGGACAAGCCGCTTTCCTTCCGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000094337.2
CDS CCA 72 bp CTTGTCCCCCGGCCCCAAGGCTGCAGCCTGTGCGACTaGCGCGGTGGTGGACGCCAGATCCAGGACAGGGCC +
Preference number: 6 (lower is better)
Translates to: LVPRPQGCSLCD*RGGGRQIQDRA
Trigger: GGCCCTGTCCTGGATCTGGCGTCCACCACCGCGCCAGTCGCACAGGCTGCAGCCTTGGGGCCGGGGGACAAG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000094337.2
CDS GCA 72 bp TGTGGCCCGGCGGTGGCAACATGGCCCGCGGGGAACTaGAGCCCTGCAAAGGTGCTGTTCGGGATGGAAGTG +
Preference number: 6 (lower is better)
Translates to: CGPAVATWPAGN*SPAKVLFGMEV
Trigger: CACTTCCATCCCGAACAGCACCTTTGCAGGGCTGCAGTTCCCCGCGGGCCATGTTGCCACCGCCGGGCCACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094337.2
CDS CCA 72 bp GCCACGGGCTGCGTTTCCGTACACTCCGGCTGGTGGTaGCGGCCTCACACCAGTACGATTCGAGCTCCTCGA +
Preference number: 6 (lower is better)
Translates to: ATGCVSVHSGWW*RPHTSTIRAPR
Trigger: TCGAGGAGCTCGAATCGTACTGGTGTGAGGCCGCCACCACCAGCCGGAGTGTACGGAAACGCAGCCCGTGGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094337.2
CDS CCA 72 bp GCTGCAGCCACGGGCTGCGTTTCCGTACACTCCGGCTaGTGGTGGCGGCCTCACACCAGTACGATTCGAGCT +
Preference number: 6 (lower is better)
Translates to: AAATGCVSVHSG*WWRPHTSTIRA
Trigger: AGCTCGAATCGTACTGGTGTGAGGCCGCCACCACCAGCCGGAGTGTACGGAAACGCAGCCCGTGGCTGCAGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094337.2
CDS CCA 72 bp GCCTCCTGCGGGCTTAACGTCCTCAGCACCGGTGTCTaGAACAGCTCTTGCACGGTCACGGCCACCTTGGAG +
Preference number: 6 (lower is better)
Translates to: ASCGLNVLSTGV*NSSCTVTATLE
Trigger: CTCCAAGGTGGCCGTGACCGTGCAAGAGCTGTTCCAGACACCGGTGCTGAGGACGTTAAGCCCGCAGGAGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094337.2
CDS CCA 72 bp GCTCTTGCACGGTCACGGCCACCTTGGAGGAGAACATaGGCGCACTCTCCACTGGGATACGCATGGTGCCAG +
Preference number: 6 (lower is better)
Translates to: ALARSRPPWRRT*AHSPLGYAWCQ
Trigger: CTGGCACCATGCGTATCCCAGTGGAGAGTGCGCCCATGTTCTCCTCCAAGGTGGCCGTGACCGTGCAAGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094337.2
CDS GCA 72 bp AGAACATGGGCGCACTCTCCACTGGGATACGCATGGTaGCAGAGCACTGGTAGTGACCGCTGTCGCTGGCTC +
Preference number: 6 (lower is better)
Translates to: RTWAHSPLGYAW*QSTGSDRCRWL
Trigger: GAGCCAGCGACAGCGGTCACTACCAGTGCTCTGGCACCATGCGTATCCCAGTGGAGAGTGCGCCCATGTTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094337.2
CDS CCA 72 bp GGCCACCTTGGAGGAGAACATGGGCGCACTCTCCACTaGGATACGCATGGTGCCAGAGCACTGGTAGTGACC +
Preference number: 6 (lower is better)
Translates to: GHLGGEHGRTLH*DTHGARALVVT
Trigger: GGTCACTACCAGTGCTCTGGCACCATGCGTATCCCAGTGGAGAGTGCGCCCATGTTCTCCTCCAAGGTGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094337.2
CDS TCA 72 bp CCTTTAATCCCAGGACCACGCGGCTCAGAAGGCCTTTaGGCAGCTGCATCTCGCGAAGCAGGAGGTCCACCT +
Preference number: 6 (lower is better)
Translates to: PLIPGPRGSEGL*AAASREAGGPP
Trigger: AGGTGGACCTCCTGCTTCGCGAGATGCAGCTGCTCAAAGGCCTTCTGAGCCGCGTGGTCCTGGGATTAAAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094337.2
CDS GCA 72 bp GGGTGCTCCTCGTGTCTGACATCGATACACCCCTGGTaGCTGCACCTCGATGCTCTTCTTGTGGGAAGGCAG +
Preference number: 6 (lower is better)
Translates to: GCSSCLTSIHPW*LHLDALLVGRQ
Trigger: CTGCCTTCCCACAAGAAGAGCATCGAGGTGCAGGCACCAGGGGTGTATCGATGTCAGACACGAGGAGCACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094337.2
CDS CCA 72 bp ACCTCGATGCTCTTCTTGTGGGAAGGCAGGAGGACATaGCCCAGGTACCAGAGAGTGCTAATGGGCCGGAGC +
Preference number: 6 (lower is better)
Translates to: TSMLFLWEGRRT*PRYQRVLMGRS
Trigger: GCTCCGGCCCATTAGCACTCTCTGGTACCTGGGCCATGTCCTCCTGCCTTCCCACAAGAAGAGCATCGAGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094337.2
CDS CCA 72 bp TACACCCCTGGTGCCTGCACCTCGATGCTCTTCTTGTaGGAAGGCAGGAGGACATGGCCCAGGTACCAGAGA +
Preference number: 6 (lower is better)
Translates to: YTPGACTSMLFL*EGRRTWPRYQR
Trigger: TCTCTGGTACCTGGGCCATGTCCTCCTGCCTTCCCACAAGAAGAGCATCGAGGTGCAGGCACCAGGGGTGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094337.2
CDS CCA 72 bp GACGGGTGCTCCTCGTGTCTGACATCGATACACCCCTaGTGCCTGCACCTCGATGCTCTTCTTGTGGGAAGG +
Preference number: 6 (lower is better)
Translates to: DGCSSCLTSIHP*CLHLDALLVGR
Trigger: CCTTCCCACAAGAAGAGCATCGAGGTGCAGGCACCAGGGGTGTATCGATGTCAGACACGAGGAGCACCCGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094337.2
CDS CAA 72 bp TCCTTTAATCCCAGGACCACGCGGCTCAGAAGGCCTTaGAGCAGCTGCATCTCGCGAAGCAGGAGGTCCACC +
Preference number: 6 (lower is better)
Translates to: SFNPRTTRLRRP*SSCISRSRRST
Trigger: GGTGGACCTCCTGCTTCGCGAGATGCAGCTGCTCAAAGGCCTTCTGAGCCGCGTGGTCCTGGGATTAAAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094337.2
CDS CAA 90 bp CATGGTGCCAGAGCACTGGTAGTGACCGCTGTCGCTGGCTCGCGCTaGCAGCACCGTGTAGTTGGTGCTAGAGTGGAAATATCTCACAGC +
Preference number: 6 (lower is better)
Translates to: HGARALVVTAVAGSR*QHRVVGARVEISHS
Trigger: GCTGTGAGATATTTCCACTCTAGCACCAACTACACGGTGCTGCAAGCGCGAGCCAGCGACAGCGGTCACTACCAGTGCTCTGGCACCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094337.2
CDS TCA 72 bp AGGTGGATAGGATCACTGACGGGTGCTCCTCGTGTCTaGCATCGATACACCCCTGGTGCCTGCACCTCGATG +
Preference number: 6 (lower is better)
Translates to: RWIGSLTGAPRV*HRYTPGACTSM
Trigger: CATCGAGGTGCAGGCACCAGGGGTGTATCGATGTCAGACACGAGGAGCACCCGTCAGTGATCCTATCCACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094337.2
CDS GCA 72 bp TCTGACATCGATACACCCCTGGTGCCTGCACCTCGATaGTCTTCTTGTGGGAAGGCAGGAGGACATGGCCCA +
Preference number: 6 (lower is better)
Translates to: SDIDTPLVPAPR*SSCGKAGGHGP
Trigger: TGGGCCATGTCCTCCTGCCTTCCCACAAGAAGAGCATCGAGGTGCAGGCACCAGGGGTGTATCGATGTCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094337.2
CDS GCA 72 bp GTCCACTCGGCCCTCCATGACAGTGGTCTCTGGGGTTaGGGGGTTCACAGTAACGTGAGAATTGGGTGTCTC +
Preference number: 6 (lower is better)
Translates to: VHSALHDSGLWG*GVHSNVRIGCL
Trigger: GAGACACCCAATTCTCACGTTACTGTGAACCCCGCAACCCCAGAGACCACTGTCATGGAGGGCCGAGTGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000094337.2
CDS CCA 72 bp AGAGTGCTAATGGGCCGGAGCTCCAGCAGCAGAGGGTaGTATCCATCACATCTCAGGGTTACTCGCTCTCCC +
Preference number: 6 (lower is better)
Translates to: RVLMGRSSSSRG*YPSHLRVTRSP
Trigger: GGGAGAGCGAGTAACCCTGAGATGTGATGGATACCACCCTCTGCTGCTGGAGCTCCGGCCCATTAGCACTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094337.2
CDS TCA 72 bp CAGCCCTGCAAAGGTGCTGTTCGGGATGGAAGTGACTaGCTGAACGGATCTGGACACTGGGGTCTTCCGGAA +
Preference number: 6 (lower is better)
Translates to: QPCKGAVRDGSD*LNGSGHWGLPE
Trigger: TTCCGGAAGACCCCAGTGTCCAGATCCGTTCAGTCAGTCACTTCCATCCCGAACAGCACCTTTGCAGGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094337.2
CDS TCA 72 bp ACTGCAGCCCTGCAAAGGTGCTGTTCGGGATGGAAGTaGCTGACTGAACGGATCTGGACACTGGGGTCTTCC +
Preference number: 6 (lower is better)
Translates to: TAALQRCCSGWK*LTERIWTLGSS
Trigger: GGAAGACCCCAGTGTCCAGATCCGTTCAGTCAGTCACTTCCATCCCGAACAGCACCTTTGCAGGGCTGCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094337.2
CDS CAA 72 bp AGAGCACTGGTAGTGACCGCTGTCGCTGGCTCGCGCTaGCAGCACCGTGTAGTTGGTGCTAGAGTGGAAATA +
Preference number: 6 (lower is better)
Translates to: RALVVTAVAGSR*QHRVVGARVEI
Trigger: TATTTCCACTCTAGCACCAACTACACGGTGCTGCAAGCGCGAGCCAGCGACAGCGGTCACTACCAGTGCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094337.2
CDS TCA 72 bp CCTGCAAAGGTGCTGTTCGGGATGGAAGTGACTGACTaGACGGATCTGGACACTGGGGTCTTCCGGAAGGAA +
Preference number: 6 (lower is better)
Translates to: PAKVLFGMEVTD*TDLDTGVFRKE
Trigger: TTCCTTCCGGAAGACCCCAGTGTCCAGATCCGTTCAGTCAGTCACTTCCATCCCGAACAGCACCTTTGCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094337.2
CDS GCA 72 bp GTTAGACACAGAGAGGTGGATAGGATCACTGACGGGTaGTCCTCGTGTCTGACATCGATACACCCCTGGTGC +
Preference number: 6 (lower is better)
Translates to: VRHREVDRITDG*SSCLTSIHPWC
Trigger: GCACCAGGGGTGTATCGATGTCAGACACGAGGAGCACCCGTCAGTGATCCTATCCACCTCTCTGTGTCTAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094337.2
CDS GCA 72 bp AAGGGCTCTCCCTCGAACACCGCAGCATACGGCACTTaGAGAATTAGCCAGTCGTTAGACACAGAGAGGTGG +
Preference number: 6 (lower is better)
Translates to: KGSPSNTAAYGT*RISQSLDTERW
Trigger: CCACCTCTCTGTGTCTAACGACTGGCTAATTCTGCAAGTGCCGTATGCTGCGGTGTTCGAGGGAGAGCCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094337.2
CDS CAA 90 bp AGCAGAGGGTGGTATCCATCACATCTCAGGGTTACTCGCTCTCCCTaGAAGATGGTGGTCCAAGGTGGGTGTAGAGTCAGTACAGGCTTC +
Preference number: 6 (lower is better)
Translates to: SRGWYPSHLRVTRSP*KMVVQGGCRVSTGF
Trigger: GAAGCCTGTACTGACTCTACACCCACCTTGGACCACCATCTTCAAGGGAGAGCGAGTAACCCTGAGATGTGATGGATACCACCCTCTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094337.2
CDS CCA 72 bp TACAGGCTTCTCCAGAGTAGCAGCTTTTCCACTTCTTaGAACCAGAAGCAGGAGGGCTGCAAGCATCCACAT +
Preference number: 6 (lower is better)
Translates to: YRLLQSSSFSTS*NQKQEGCKHPH
Trigger: ATGTGGATGCTTGCAGCCCTCCTGCTTCTGGTTCCAAGAAGTGGAAAAGCTGCTACTCTGGAGAAGCCTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094337.2