Pregenerated sensors for FCRL6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000070504Ensembl transcript IDs: ENSMUST00000094303.6
Found 64 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGAGCCACTGCTGAGTGCTGGAGGGTGGAGGCTGGGAGCTGGAGTTaGGTGTATGTTGGAGGAAGACATTGCACTAACACAGAGCATGAT | + |
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Preference number: 1 (lower is better) Translates to: GATAECWRVEAGSWS*VYVGGRHCTNTEHD Trigger: ATCATGCTCTGTGTTAGTGCAATGTCTTCCTCCAACATACACTCAACTCCAGCTCCCAGCCTCCACCCTCCAGCACTCAGCAGTGGCTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094303.6 |
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| 3UTR CCA 90 bp | TATGTATGTATCAAGGTGGAAATTGTTCATTCCCACACCATTGTTTaGTTTCCCGCTCAGAAGAGAACCCACAGTTCAGGAGCCCTGGCC | + |
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Preference number: 1 (lower is better) Translates to: YVCIKVEIVHSHTIV*FPAQKRTHSSGALA Trigger: GGCCAGGGCTCCTGAACTGTGGGTTCTCTTCTGAGCGGGAAACCAAACAATGGTGTGGGAATGAACAATTTCCACCTTGATACATACATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094303.6 |
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| 3UTR CCA 90 bp | GATCCCTTATCAAGATTCTATGATATTGTATGGGCAGCCCATTTATaGGTACACCTTGGTCTTGCTGAACTTCCCAGAGGCCTGTTAGTC | + |
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Preference number: 1 (lower is better) Translates to: DPLSRFYDIVWAAHL*VHLGLAELPRGLLV Trigger: GACTAACAGGCCTCTGGGAAGTTCAGCAAGACCAAGGTGTACCCATAAATGGGCTGCCCATACAATATCATAGAATCTTGATAAGGGATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094303.6 |
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| 3UTR CCA 90 bp | TGCCTTCACAGCTCTGATCCCTTATCAAGATTCTATGATATTGTATaGGCAGCCCATTTATGGGTACACCTTGGTCTTGCTGAACTTCCC | + |
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Preference number: 1 (lower is better) Translates to: CLHSSDPLSRFYDIV*AAHLWVHLGLAELP Trigger: GGGAAGTTCAGCAAGACCAAGGTGTACCCATAAATGGGCTGCCCATACAATATCATAGAATCTTGATAAGGGATCAGAGCTGTGAAGGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094303.6 |
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| 3UTR CAA 90 bp | CTTTCTCACTGCTGGGCTAGGAACTGGGTGACCTGCAGGGAGAACTaGGAGCCACTGCTGAGTGCTGGAGGGTGGAGGCTGGGAGCTGGA | + |
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Preference number: 2 (lower is better) Translates to: LSHCWARNWVTCREN*EPLLSAGGWRLGAG Trigger: TCCAGCTCCCAGCCTCCACCCTCCAGCACTCAGCAGTGGCTCCAAGTTCTCCCTGCAGGTCACCCAGTTCCTAGCCCAGCAGTGAGAAAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094303.6 |
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| 3UTR-3UTR TCA 90 bp | GTATGGGCAGCCCATTTATGGGTACACCTTGGTCTTGCTGAACTTCCCAGAGGCACTTGGAGCCACTGCTaGGTGCTGGAGGGTGGAGGC | + |
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Preference number: 2 (lower is better) Translates to: VWAAHLWVHLGLAELPRGTWSHC*VLEGGG Trigger: GCCTCCACCCTCCAGCACTCAGCAGTGGCTCCAAGT...GCCTCTGGGAAGTTCAGCAAGACCAAGGTGTACCCATAAATGGGCTGCCCATAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094303.6 |
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| 3UTR CAA 90 bp | CTGAGTGCTGGAGGGTGGAGGCTGGGAGCTGGAGTTGAGTGTATGTaGGAGGAAGACATTGCACTAACACAGAGCATGATCCTAAAGACC | + |
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Preference number: 2 (lower is better) Translates to: LSAGGWRLGAGVECM*EEDIALTQSMILKT Trigger: GGTCTTTAGGATCATGCTCTGTGTTAGTGCAATGTCTTCCTCCAACATACACTCAACTCCAGCTCCCAGCCTCCACCCTCCAGCACTCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094303.6 |
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| 3UTR-3UTR TCA 90 bp | GTATGGGCAGCCCATTTATGGGTACACCTTGGTCTTGCTGAACTTCCCAGAGGCGCAGGTCCTGGTTTTTaGATCCAAATCATTGGTGGG | + |
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Preference number: 2 (lower is better) Translates to: VWAAHLWVHLGLAELPRGAGPGF*IQIIGG Trigger: CCCACCAATGATTTGGATTCAAAAACCAGGACCTGC...GCCTCTGGGAAGTTCAGCAAGACCAAGGTGTACCCATAAATGGGCTGCCCATAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094303.6 |
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| 3UTR-3UTR TCA 90 bp | TACAAGACATCAGTGAGTGACTTTTCTGGGGCACTCAGTAGTCTGGAGCTTTGGACACCTTGGTCTTGCTaGACTTCCCAGAGGCCTGTT | + |
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Preference number: 2 (lower is better) Translates to: YKTSVSDFSGALSSLELWTPWSC*TSQRPV Trigger: AACAGGCCTCTGGGAAGTTCAGCAAGACCAAGGTGT...CCAAAGCTCCAGACTACTGAGTGCCCCAGAAAAGTCACTCACTGATGTCTTGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094303.6 |
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| 3UTR-3UTR GCA 90 bp | TCTATGATATTGTATGGGCAGCCCATTTATGGGTACACCTTGGTCTTGCTGAACAGGAACTGGGTGACCTaGAGGGAGAACTTGGAGCCA | + |
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Preference number: 2 (lower is better) Translates to: SMILYGQPIYGYTLVLLNRNWVT*RENLEP Trigger: TGGCTCCAAGTTCTCCCTGCAGGTCACCCAGTTCCT...GTTCAGCAAGACCAAGGTGTACCCATAAATGGGCTGCCCATACAATATCATAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094303.6 |
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| 3UTR-3UTR GCA 90 bp | TACAAGACATCAGTGAGTGACTTTTCTGGGGCACTCAGTAGTCTGGAGCTTTGGAGGCAGAGTTATTTCTaGCTTCACAGCTCTGATCCC | + |
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Preference number: 2 (lower is better) Translates to: YKTSVSDFSGALSSLELWRQSYF*LHSSDP Trigger: GGGATCAGAGCTGTGAAGGCAGAAATAACTCTGCCT...CCAAAGCTCCAGACTACTGAGTGCCCCAGAAAAGTCACTCACTGATGTCTTGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094303.6 |
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| 3UTR-3UTR CCA 90 bp | GTATGGGCAGCCCATTTATGGGTACACCTTGGTCTTGCTGAACTTCCCAGAGGCGATCTTGGCAGGTCCTaGTTTTTGAATCCAAATCAT | + |
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Preference number: 2 (lower is better) Translates to: VWAAHLWVHLGLAELPRGDLGRS*FLNPNH Trigger: ATGATTTGGATTCAAAAACCAGGACCTGCCAAGATC...GCCTCTGGGAAGTTCAGCAAGACCAAGGTGTACCCATAAATGGGCTGCCCATAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094303.6 |
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| 3UTR-3UTR CCA 90 bp | ATGTATGTATCAAGGTGGAAATTGTTCATTCCCACACCATTGTTTGGTTTCCCGCTGGAGGGTGGAGGCTaGGAGCTGGAGTTGAGTGTA | + |
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Preference number: 2 (lower is better) Translates to: MYVSRWKLFIPTPLFGFPLEGGG*ELELSV Trigger: TACACTCAACTCCAGCTCCCAGCCTCCACCCTCCAG...CGGGAAACCAAACAATGGTGTGGGAATGAACAATTTCCACCTTGATACATACAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094303.6 |
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| 3UTR-3UTR CCA 90 bp | ATGTATGTATCAAGGTGGAAATTGTTCATTCCCACACCATTGTTTGGTTTCCCGGGGCTTTCTCACTGCTaGGCTAGGAACTGGGTGACC | + |
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Preference number: 2 (lower is better) Translates to: MYVSRWKLFIPTPLFGFPGLSHC*ARNWVT Trigger: GGTCACCCAGTTCCTAGCCCAGCAGTGAGAAAGCCC...CGGGAAACCAAACAATGGTGTGGGAATGAACAATTTCCACCTTGATACATACAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094303.6 |
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| 3UTR-3UTR CCA 90 bp | AAGGTGGAAATTGTTCATTCCCACACCATTGTTTGGTTTCCCGCTCAGAAGAGAAGACCAAGGGGATCTTaGCAGGTCCTGGTTTTTGAA | + |
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Preference number: 2 (lower is better) Translates to: KVEIVHSHTIVWFPAQKRRPRGS*QVLVFE Trigger: TTCAAAAACCAGGACCTGCCAAGATCCCCTTGGTCT...TCTCTTCTGAGCGGGAAACCAAACAATGGTGTGGGAATGAACAATTTCCACCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000094303.6 |
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| 3UTR CAA 90 bp | ATTTCTGCCTTCACAGCTCTGATCCCTTATCAAGATTCTATGATATaGTATGGGCAGCCCATTTATGGGTACACCTTGGTCTTGCTGAAC | + |
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Preference number: 2 (lower is better) Translates to: ISAFTALIPYQDSMI*YGQPIYGYTLVLLN Trigger: GTTCAGCAAGACCAAGGTGTACCCATAAATGGGCTGCCCATACAATATCATAGAATCTTGATAAGGGATCAGAGCTGTGAAGGCAGAAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094303.6 |
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| 3UTR CAA 90 bp | GTGTATCTATCATCTGTCTATCTGGAGGTGAAAACCCTTTTCCTTTaGTACTTAAAGAAGATAACTGTGGCTCTGTGTACAATGTTACAT | + |
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Preference number: 2 (lower is better) Translates to: VYLSSVYLEVKTLFL*YLKKITVALCTMLH Trigger: ATGTAACATTGTACACAGAGCCACAGTTATCTTCTTTAAGTACAAAAGGAAAAGGGTTTTCACCTCCAGATAGACAGATGATAGATACAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094303.6 |
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| 3UTR GCA 72 bp | GGGCTTTCTCACTGCTGGGCTAGGAACTGGGTGACCTaGAGGGAGAACTTGGAGCCACTGCTGAGTGCTGGA | + |
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Preference number: 3 (lower is better) Translates to: GLSHCWARNWVT*RENLEPLLSAG Trigger: TCCAGCACTCAGCAGTGGCTCCAAGTTCTCCCTGCAGGTCACCCAGTTCCTAGCCCAGCAGTGAGAAAGCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094303.6 |
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| 3UTR CCA 72 bp | TTCCCGCTCAGAAGAGAACCCACAGTTCAGGAGCCCTaGCCAGGAATAGGGCAAATGGGCTTTCTCACTGCT | + |
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Preference number: 3 (lower is better) Translates to: FPLRREPTVQEP*PGIGQMGFLTA Trigger: AGCAGTGAGAAAGCCCATTTGCCCTATTCCTGGCCAGGGCTCCTGAACTGTGGGTTCTCTTCTGAGCGGGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094303.6 |
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| 3UTR-3UTR CAA 90 bp | TACAAGACATCAGTGAGTGACTTTTCTGGGGCACTCAGTAGTCTGGAGCTTTGGACCTGCAGGGAGAACTaGGAGCCACTGCTGAGTGCT | + |
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Preference number: 3 (lower is better) Translates to: YKTSVSDFSGALSSLELWTCREN*EPLLSA Trigger: AGCACTCAGCAGTGGCTCCAAGTTCTCCCTGCAGGT...CCAAAGCTCCAGACTACTGAGTGCCCCAGAAAAGTCACTCACTGATGTCTTGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094303.6 |
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| 3UTR-3UTR CAA 90 bp | GTATGGGCAGCCCATTTATGGGTACACCTTGGTCTTGCTGAACTTCCCAGAGGCGGCAGGTCCTGGTTTTaGAATCCAAATCATTGGTGG | + |
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Preference number: 3 (lower is better) Translates to: VWAAHLWVHLGLAELPRGGRSWF*NPNHWW Trigger: CCACCAATGATTTGGATTCAAAAACCAGGACCTGCC...GCCTCTGGGAAGTTCAGCAAGACCAAGGTGTACCCATAAATGGGCTGCCCATAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094303.6 |
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| 3UTR TCA 72 bp | ATGGGCAGCCCATTTATGGGTACACCTTGGTCTTGCTaGACTTCCCAGAGGCCTGTTAGTCTTGTAGTCAAG | + |
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Preference number: 3 (lower is better) Translates to: MGSPFMGTPWSC*TSQRPVSLVVK Trigger: CTTGACTACAAGACTAACAGGCCTCTGGGAAGTTCAGCAAGACCAAGGTGTACCCATAAATGGGCTGCCCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094303.6 |
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| 3UTR-3UTR CAA 90 bp | GTATGGGCAGCCCATTTATGGGTACACCTTGGTCTTGCTGAACTTCCCAGAGGCCTTGTAGTCAAGGTTTaGTGCTTTCCTTTCAGGATA | + |
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Preference number: 3 (lower is better) Translates to: VWAAHLWVHLGLAELPRGLVVKV*CFPFRI Trigger: TATCCTGAAAGGAAAGCACAAAACCTTGACTACAAG...GCCTCTGGGAAGTTCAGCAAGACCAAGGTGTACCCATAAATGGGCTGCCCATAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094303.6 |
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| 3UTR CCA 72 bp | TCAAGATTCTATGATATTGTATGGGCAGCCCATTTATaGGTACACCTTGGTCTTGCTGAACTTCCCAGAGGC | + |
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Preference number: 3 (lower is better) Translates to: SRFYDIVWAAHL*VHLGLAELPRG Trigger: GCCTCTGGGAAGTTCAGCAAGACCAAGGTGTACCCATAAATGGGCTGCCCATACAATATCATAGAATCTTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094303.6 |
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| 3UTR-3UTR CAA 90 bp | TCTATGATATTGTATGGGCAGCCCATTTATGGGTACACCTTGGTCTTGCTGAACGTATCAAGGTGGAAATaGTTCATTCCCACACCATTG | + |
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Preference number: 3 (lower is better) Translates to: SMILYGQPIYGYTLVLLNVSRWK*FIPTPL Trigger: CAATGGTGTGGGAATGAACAATTTCCACCTTGATAC...GTTCAGCAAGACCAAGGTGTACCCATAAATGGGCTGCCCATACAATATCATAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094303.6 |
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| 3UTR CCA 72 bp | AGCTCTGATCCCTTATCAAGATTCTATGATATTGTATaGGCAGCCCATTTATGGGTACACCTTGGTCTTGCT | + |
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Preference number: 3 (lower is better) Translates to: SSDPLSRFYDIV*AAHLWVHLGLA Trigger: AGCAAGACCAAGGTGTACCCATAAATGGGCTGCCCATACAATATCATAGAATCTTGATAAGGGATCAGAGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094303.6 |
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| CDS-3UTR CCA 90 bp | TGGGTGACCTGCAGGGAGAACTTGGAGCCACTGCTGAGTGCTGGAGGGTGGAGGGGAAGGGAGCCCTGGTaGGCCTCACAGAGGAACTCC | + |
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Preference number: 4 (lower is better) Translates to: WVTCRENLEPLLSAGGWRGREPW*ASQRNS Trigger: GGAGTTCCTCTGTGAGGCCCACCAGGGCTCCCTTCC...CCTCCACCCTCCAGCACTCAGCAGTGGCTCCAAGTTCTCCCTGCAGGTCACCCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094303.6 |
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| CDS-3UTR CCA 90 bp | TGGGTGACCTGCAGGGAGAACTTGGAGCCACTGCTGAGTGCTGGAGGGTGGAGGTGTCAGCTCAGGATTTaGGAACAACTCTTGAGCTTC | + |
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Preference number: 4 (lower is better) Translates to: WVTCRENLEPLLSAGGWRCQLRI*EQLLSF Trigger: GAAGCTCAAGAGTTGTTCCCAAATCCTGAGCTGACA...CCTCCACCCTCCAGCACTCAGCAGTGGCTCCAAGTTCTCCCTGCAGGTCACCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094303.6 |
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| CDS-3UTR GCA 90 bp | GGAGTTGAGTGTATGTTGGAGGAAGACATTGCACTAACACAGAGCATGATCCTAGGAGGGAGGCAGCTCTaGCAGAGGGAGCCAGGGGTT | + |
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Preference number: 4 (lower is better) Translates to: GVECMLEEDIALTQSMILGGRQL*QREPGV Trigger: AACCCCTGGCTCCCTCTGGCAGAGCTGCCTCCCTCC...TAGGATCATGCTCTGTGTTAGTGCAATGTCTTCCTCCAACATACACTCAACTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094303.6 |
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| 3UTR CAA 72 bp | GGAGGGTGGAGGCTGGGAGCTGGAGTTGAGTGTATGTaGGAGGAAGACATTGCACTAACACAGAGCATGATC | + |
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Preference number: 4 (lower is better) Translates to: GGWRLGAGVECM*EEDIALTQSMI Trigger: GATCATGCTCTGTGTTAGTGCAATGTCTTCCTCCAACATACACTCAACTCCAGCTCCCAGCCTCCACCCTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094303.6 |
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| CDS-3UTR TCA 90 bp | TCTATGATATTGTATGGGCAGCCCATTTATGGGTACACCTTGGTCTTGCTGAACCCACTCTGCCTTTACTaGGGCGAGGAGGGAGGCAGC | + |
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Preference number: 4 (lower is better) Translates to: SMILYGQPIYGYTLVLLNPLCLY*GEEGGS Trigger: GCTGCCTCCCTCCTCGCCTCAGTAAAGGCAGAGTGG...GTTCAGCAAGACCAAGGTGTACCCATAAATGGGCTGCCCATACAATATCATAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094303.6 |
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| CDS-3UTR CCA 90 bp | GTATGGGCAGCCCATTTATGGGTACACCTTGGTCTTGCTGAACTTCCCAGAGGCTGGGCGTCTCAGGTCTaGCATGCTTTTTACAGGGTT | + |
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Preference number: 4 (lower is better) Translates to: VWAAHLWVHLGLAELPRGWASQV*HAFYRV Trigger: AACCCTGTAAAAAGCATGCCAGACCTGAGACGCCCA...GCCTCTGGGAAGTTCAGCAAGACCAAGGTGTACCCATAAATGGGCTGCCCATAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094303.6 |
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| CDS-3UTR CCA 90 bp | TACAAGACATCAGTGAGTGACTTTTCTGGGGCACTCAGTAGTCTGGAGCTTTGGCTTGAGCTTCAGCCATaGACTCACAGAGCAGGAGAA | + |
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Preference number: 4 (lower is better) Translates to: YKTSVSDFSGALSSLELWLELQP*THRAGE Trigger: TTCTCCTGCTCTGTGAGTCCATGGCTGAAGCTCAAG...CCAAAGCTCCAGACTACTGAGTGCCCCAGAAAAGTCACTCACTGATGTCTTGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094303.6 |
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| CDS-3UTR CCA 90 bp | TCAAGGTGGAAATTGTTCATTCCCACACCATTGTTTGGTTTCCCGCTCAGAAGACTGGCTCTTTTAGGGTaGGCGTCTCAGGTCTGGCAT | + |
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Preference number: 4 (lower is better) Translates to: SRWKLFIPTPLFGFPLRRLALLG*ASQVWH Trigger: ATGCCAGACCTGAGACGCCCACCCTAAAAGAGCCAG...TCTTCTGAGCGGGAAACCAAACAATGGTGTGGGAATGAACAATTTCCACCTTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094303.6 |
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| CDS-3UTR TCA 90 bp | TACAAGACATCAGTGAGTGACTTTTCTGGGGCACTCAGTAGTCTGGAGCTTTGGTTTGGGAACAACTCTTaGGCTTCAGCCATGGACTCA | + |
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Preference number: 4 (lower is better) Translates to: YKTSVSDFSGALSSLELWFGNNS*ASAMDS Trigger: TGAGTCCATGGCTGAAGCTCAAGAGTTGTTCCCAAA...CCAAAGCTCCAGACTACTGAGTGCCCCAGAAAAGTCACTCACTGATGTCTTGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094303.6 |
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| CDS-3UTR TCA 90 bp | ATATTGTATGGGCAGCCCATTTATGGGTACACCTTGGTCTTGCTGAACTTCCCACTTCATGTTGCAGAGTaGGCACAGGATGGGATACAG | + |
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Preference number: 4 (lower is better) Translates to: ILYGQPIYGYTLVLLNFPLHVAE*AQDGIQ Trigger: CTGTATCCCATCCTGTGCTCACTCTGCAACATGAAG...TGGGAAGTTCAGCAAGACCAAGGTGTACCCATAAATGGGCTGCCCATACAATAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094303.6 |
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| CDS-3UTR TCA 90 bp | TACAAGACATCAGTGAGTGACTTTTCTGGGGCACTCAGTAGTCTGGAGCTTTGGCCAAGGGGAACTTCTTaGGCTCACTTATTTCTCTGG | + |
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Preference number: 4 (lower is better) Translates to: YKTSVSDFSGALSSLELWPRGTS*AHLFLW Trigger: CCAGAGAAATAAGTGAGCTCAAGAAGTTCCCCTTGG...CCAAAGCTCCAGACTACTGAGTGCCCCAGAAAAGTCACTCACTGATGTCTTGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000094303.6 |
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| CDS-3UTR TCA 90 bp | TCTATGATATTGTATGGGCAGCCCATTTATGGGTACACCTTGGTCTTGCTGAACGATCCAGGCAGTACCTaGGACAACCAAGGGGAACTT | + |
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Preference number: 4 (lower is better) Translates to: SMILYGQPIYGYTLVLLNDPGST*DNQGEL Trigger: AAGTTCCCCTTGGTTGTCTCAGGTACTGCCTGGATC...GTTCAGCAAGACCAAGGTGTACCCATAAATGGGCTGCCCATACAATATCATAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094303.6 |
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| CDS-3UTR TCA 90 bp | ATATTGTATGGGCAGCCCATTTATGGGTACACCTTGGTCTTGCTGAACTTCCCATGGGGACTCCTGTCTTaGATGACATGGTTGTTCTTG | + |
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Preference number: 4 (lower is better) Translates to: ILYGQPIYGYTLVLLNFPWGLLS*MTWLFL Trigger: CAAGAACAACCATGTCATTCAAGACAGGAGTCCCCA...TGGGAAGTTCAGCAAGACCAAGGTGTACCCATAAATGGGCTGCCCATACAATAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094303.6 |
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| CDS-3UTR TCA 90 bp | ATATTGTATGGGCAGCCCATTTATGGGTACACCTTGGTCTTGCTGAACTTCCCATTCTGCAGAAAATACTaGGTGGGGACTCCTGTCTTG | + |
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Preference number: 4 (lower is better) Translates to: ILYGQPIYGYTLVLLNFPFCRKY*VGTPVL Trigger: CAAGACAGGAGTCCCCACTCAGTATTTTCTGCAGAA...TGGGAAGTTCAGCAAGACCAAGGTGTACCCATAAATGGGCTGCCCATACAATAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094303.6 |
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| 3UTR CAA 72 bp | TATCAAGGTGGAAATTGTTCATTCCCACACCATTGTTaGGTTTCCCGCTCAGAAGAGAACCCACAGTTCAGG | + |
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Preference number: 4 (lower is better) Translates to: YQGGNCSFPHHC*VSRSEENPQFR Trigger: CCTGAACTGTGGGTTCTCTTCTGAGCGGGAAACCAAACAATGGTGTGGGAATGAACAATTTCCACCTTGATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094303.6 |
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| CDS-3UTR TCA 90 bp | GGAGTTGAGTGTATGTTGGAGGAAGACATTGCACTAACACAGAGCATGATCCTAGACATCCATCGTCTCTaGATTGGTGAATTCTGTCAG | + |
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Preference number: 4 (lower is better) Translates to: GVECMLEEDIALTQSMILDIHRL*IGEFCQ Trigger: CTGACAGAATTCACCAATTCAGAGACGATGGATGTC...TAGGATCATGCTCTGTGTTAGTGCAATGTCTTCCTCCAACATACACTCAACTCC 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094303.6 |
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| CDS-3UTR CCA 90 bp | ACAGAGCATGATCCTAAAGACCAAGGGGATCTTGGCAGGTCCTGGTTTTTGAATCAGAGTTTTCCTCCTTaGCTTCTGCAGAAAATACTG | + |
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Preference number: 4 (lower is better) Translates to: TEHDPKDQGDLGRSWFLNQSFPP*LLQKIL Trigger: CAGTATTTTCTGCAGAAGCCAAGGAGGAAAACTCTG...ATTCAAAAACCAGGACCTGCCAAGATCCCCTTGGTCTTTAGGATCATGCTCTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000094303.6 |
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| CDS-3UTR TCA 90 bp | TCAAGGTGGAAATTGTTCATTCCCACACCATTGTTTGGTTTCCCGCTCAGAAGAGACTCCTGTCTTGAATaGCATGGTTGTTCTTGTAGA | + |
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Preference number: 4 (lower is better) Translates to: SRWKLFIPTPLFGFPLRRDSCLE*HGCSCR Trigger: TCTACAAGAACAACCATGTCATTCAAGACAGGAGTC...TCTTCTGAGCGGGAAACCAAACAATGGTGTGGGAATGAACAATTTCCACCTTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094303.6 |
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| 3UTR CAA 72 bp | TATGTATCAAGGTGGAAATTGTTCATTCCCACACCATaGTTTGGTTTCCCGCTCAGAAGAGAACCCACAGTT | + |
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Preference number: 4 (lower is better) Translates to: YVSRWKLFIPTP*FGFPLRREPTV Trigger: AACTGTGGGTTCTCTTCTGAGCGGGAAACCAAACAATGGTGTGGGAATGAACAATTTCCACCTTGATACATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094303.6 |
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| 3UTR CAA 72 bp | TGTAGGCATGTGTATATGTATGTATCAAGGTGGAAATaGTTCATTCCCACACCATTGTTTGGTTTCCCGCTC | + |
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Preference number: 4 (lower is better) Translates to: CRHVYMYVSRWK*FIPTPLFGFPL Trigger: GAGCGGGAAACCAAACAATGGTGTGGGAATGAACAATTTCCACCTTGATACATACATATACACATGCCTACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094303.6 |
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| 3UTR CAA 72 bp | ACTTCCCAGAGGCCTGTTAGTCTTGTAGTCAAGGTTTaGTGCTTTCCTTTCAGGATAAAGGCAAGTATATTT | + |
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Preference number: 4 (lower is better) Translates to: TSQRPVSLVVKV*CFPFRIKASIF Trigger: AAATATACTTGCCTTTATCCTGAAAGGAAAGCACAAAACCTTGACTACAAGACTAACAGGCCTCTGGGAAGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094303.6 |
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| 3UTR CAA 72 bp | TCATCTGTCTATCTGGAGGTGAAAACCCTTTTCCTTTaGTACTTAAAGAAGATAACTGTGGCTCTGTGTACA | + |
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Preference number: 4 (lower is better) Translates to: SSVYLEVKTLFL*YLKKITVALCT Trigger: TGTACACAGAGCCACAGTTATCTTCTTTAAGTACAAAAGGAAAAGGGTTTTCACCTCCAGATAGACAGATGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094303.6 |
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| CDS-3UTR CAA 90 bp | GCTAGGAACTGGGTGACCTGCAGGGAGAACTTGGAGCCACTGCTGAGTGCTGGATCCATCGTCTCTGAATaGGTGAATTCTGTCAGCTCA | + |
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Preference number: 5 (lower is better) Translates to: ARNWVTCRENLEPLLSAGSIVSE*VNSVSS Trigger: TGAGCTGACAGAATTCACCAATTCAGAGACGATGGA...TCCAGCACTCAGCAGTGGCTCCAAGTTCTCCCTGCAGGTCACCCAGTTCCTAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094303.6 |
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| CDS-3UTR CAA 90 bp | GCTAGGAACTGGGTGACCTGCAGGGAGAACTTGGAGCCACTGCTGAGTGCTGGAACCAAGGGGAACTTCTaGAGCTCACTTATTTCTCTG | + |
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Preference number: 5 (lower is better) Translates to: ARNWVTCRENLEPLLSAGTKGNF*SSLISL Trigger: CAGAGAAATAAGTGAGCTCAAGAAGTTCCCCTTGGT...TCCAGCACTCAGCAGTGGCTCCAAGTTCTCCCTGCAGGTCACCCAGTTCCTAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094303.6 |
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| CDS-3UTR CAA 90 bp | GTATGGGCAGCCCATTTATGGGTACACCTTGGTCTTGCTGAACTTCCCAGAGGCCCAGAGTTTTCCTCCTaGGCTTCTGCAGAAAATACT | + |
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Preference number: 5 (lower is better) Translates to: VWAAHLWVHLGLAELPRGPEFSS*ASAENT Trigger: AGTATTTTCTGCAGAAGCCAAGGAGGAAAACTCTGG...GCCTCTGGGAAGTTCAGCAAGACCAAGGTGTACCCATAAATGGGCTGCCCATAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094303.6 |
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| CDS TCA 90 bp | TCTGAATTGGTGAATTCTGTCAGCTCAGGATTTGGGAACAACTCTTaGGCTTCAGCCATGGACTCACAGAGCAGGAGAACCATCCAGAGC | + |
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Preference number: 5 (lower is better) Translates to: SELVNSVSSGFGNNS*ASAMDSQSRRTIQS Trigger: GCTCTGGATGGTTCTCCTGCTCTGTGAGTCCATGGCTGAAGCTCAAGAGTTGTTCCCAAATCCTGAGCTGACAGAATTCACCAATTCAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094303.6 |
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| CDS-3UTR CAA 90 bp | TACAAGACATCAGTGAGTGACTTTTCTGGGGCACTCAGTAGTCTGGAGCTTTGGCAGATAGGTAGCATGTaGCTCTTGATCCAGGCAGTA | + |
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Preference number: 5 (lower is better) Translates to: YKTSVSDFSGALSSLELWQIGSM*LLIQAV Trigger: TACTGCCTGGATCAAGAGCAACATGCTACCTATCTG...CCAAAGCTCCAGACTACTGAGTGCCCCAGAAAAGTCACTCACTGATGTCTTGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094303.6 |
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| CDS-3UTR CAA 90 bp | ACAGAGCATGATCCTAAAGACCAAGGGGATCTTGGCAGGTCCTGGTTTTTGAATCTGTCAGCTCAGGATTaGGGAACAACTCTTGAGCTT | + |
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Preference number: 5 (lower is better) Translates to: TEHDPKDQGDLGRSWFLNLSAQD*GTTLEL Trigger: AAGCTCAAGAGTTGTTCCCAAATCCTGAGCTGACAG...ATTCAAAAACCAGGACCTGCCAAGATCCCCTTGGTCTTTAGGATCATGCTCTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000094303.6 |
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| CDS-3UTR CAA 90 bp | AAGGTGGAAATTGTTCATTCCCACACCATTGTTTGGTTTCCCGCTCAGAAGAGAGTTAGTGGCTTCATGTaGCAGAGTGAGCACAGGATG | + |
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Preference number: 5 (lower is better) Translates to: KVEIVHSHTIVWFPAQKRVSGFM*QSEHRM Trigger: CATCCTGTGCTCACTCTGCAACATGAAGCCACTAAC...TCTCTTCTGAGCGGGAAACCAAACAATGGTGTGGGAATGAACAATTTCCACCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094303.6 |
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| CDS-3UTR CAA 90 bp | ATATTGTATGGGCAGCCCATTTATGGGTACACCTTGGTCTTGCTGAACTTCCCAAAAAGAGCTGTAAAGTaGGATTCTTGGGGTCCACCT | + |
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Preference number: 5 (lower is better) Translates to: ILYGQPIYGYTLVLLNFPKRAVK*DSWGPP Trigger: AGGTGGACCCCAAGAATCCAACTTTACAGCTCTTTT...TGGGAAGTTCAGCAAGACCAAGGTGTACCCATAAATGGGCTGCCCATACAATAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000094303.6 |
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| CDS-3UTR CAA 90 bp | AAGGTGGAAATTGTTCATTCCCACACCATTGTTTGGTTTCCCGCTCAGAAGAGATGTAAAGTTGGATTCTaGGGGTCCACCTTTATGGTA | + |
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Preference number: 5 (lower is better) Translates to: KVEIVHSHTIVWFPAQKRCKVGF*GSTFMV Trigger: TACCATAAAGGTGGACCCCAAGAATCCAACTTTACA...TCTCTTCTGAGCGGGAAACCAAACAATGGTGTGGGAATGAACAATTTCCACCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094303.6 |
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| CDS-3UTR CAA 90 bp | GGAGTTGAGTGTATGTTGGAGGAAGACATTGCACTAACACAGAGCATGATCCTAATTTCTCTGGAGATGTaGTTTTTAGCTTCACAGGAA | + |
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Preference number: 5 (lower is better) Translates to: GVECMLEEDIALTQSMILISLEM*FLASQE Trigger: TTCCTGTGAAGCTAAAAACAACATCTCCAGAGAAAT...TAGGATCATGCTCTGTGTTAGTGCAATGTCTTCCTCCAACATACACTCAACTCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094303.6 |
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| CDS TCA 72 bp | ACAGGAATAGTTCTTGGTACTCCACTCTGCCTTTACTaGGGCGAGGAGGGAGGCAGCTCTGCCAGAGGGAGC | + |
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Preference number: 6 (lower is better) Translates to: TGIVLGTPLCLY*GEEGGSSARGS Trigger: GCTCCCTCTGGCAGAGCTGCCTCCCTCCTCGCCTCAGTAAAGGCAGAGTGGAGTACCAAGAACTATTCCTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094303.6 |
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| CDS CCA 72 bp | GCTCAGGATTTGGGAACAACTCTTGAGCTTCAGCCATaGACTCACAGAGCAGGAGAACCATCCAGAGCAGCA | + |
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Preference number: 6 (lower is better) Translates to: AQDLGTTLELQP*THRAGEPSRAA Trigger: TGCTGCTCTGGATGGTTCTCCTGCTCTGTGAGTCCATGGCTGAAGCTCAAGAGTTGTTCCCAAATCCTGAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094303.6 |
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| CDS TCA 72 bp | GTGAATTCTGTCAGCTCAGGATTTGGGAACAACTCTTaGGCTTCAGCCATGGACTCACAGAGCAGGAGAACC | + |
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Preference number: 6 (lower is better) Translates to: VNSVSSGFGNNS*ASAMDSQSRRT Trigger: GGTTCTCCTGCTCTGTGAGTCCATGGCTGAAGCTCAAGAGTTGTTCCCAAATCCTGAGCTGACAGAATTCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094303.6 |
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| CDS CAA 72 bp | GTGGGCGTCTCAGGTCTGGCATGCTTTTTACAGGGTTaGAAGAAATACATTAGAACCACAGCCGCAATGACC | + |
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Preference number: 6 (lower is better) Translates to: VGVSGLACFLQG*KKYIRTTAAMT Trigger: GGTCATTGCGGCTGTGGTTCTAATGTATTTCTTCAAACCCTGTAAAAAGCATGCCAGACCTGAGACGCCCAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094303.6 |
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| CDS TCA 72 bp | CTTTATGGTACACTTCAGGATGACATCCATCGTCTCTaGATTGGTGAATTCTGTCAGCTCAGGATTTGGGAA | + |
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Preference number: 6 (lower is better) Translates to: LYGTLQDDIHRL*IGEFCQLRIWE Trigger: TTCCCAAATCCTGAGCTGACAGAATTCACCAATTCAGAGACGATGGATGTCATCCTGAAGTGTACCATAAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094303.6 |
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| CDS CAA 72 bp | GGTTGTTCTTGTAGAAAGTGTAAAAGAGCTGTAAAGTaGGATTCTTGGGGTCCACCTTTATGGTACACTTCA | + |
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Preference number: 6 (lower is better) Translates to: GCSCRKCKRAVK*DSWGPPLWYTS Trigger: TGAAGTGTACCATAAAGGTGGACCCCAAGAATCCAACTTTACAGCTCTTTTACACTTTCTACAAGAACAACC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094303.6 |
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