Pregenerated sensors for FCRL5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000048031Ensembl transcript IDs: ENSMUST00000049926.15, ENSMUST00000166297.7, ENSMUST00000178261.3, ENSMUST00000193229.6, ENSMUST00000194102.6
Found 180 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CGCCAATTCATTCTTGGAGCCTGGAACAGGCTACAGGTGACGATGTaGAGGATAGGGTGTAGTCTCTGGAATAGCTCAGTGGCCTCCCAG | + |
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Preference number: 1 (lower is better) Translates to: RQFILGAWNRLQVTM*RIGCSLWNSSVASQ Trigger: CTGGGAGGCCACTGAGCTATTCCAGAGACTACACCCTATCCTGCACATCGTCACCTGTAGCCTGTTCCAGGCTCCAAGAATGAATTGGCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194102.6 |
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| 3UTR CCA 90 bp | TCACCCTGTCCACACCACAGCCATGCTGCTGGTCTGTGTTTACGTTaGCTGTTTCTCATGCGTTACCTGTCTTTCCTCCCCACTTTCCAG | + |
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Preference number: 1 (lower is better) Translates to: SPCPHHSHAAGLCLR*LFLMRYLSFLPTFQ Trigger: CTGGAAAGTGGGGAGGAAAGACAGGTAACGCATGAGAAACAGCCAACGTAAACACAGACCAGCAGCATGGCTGTGGTGTGGACAGGGTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193229.6 |
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| 3UTR CCA 90 bp | GGCTCCACCCTAGGTAAACTTCTTAGTGGCAGCAAGGTCAAGGTCTaGCTCAGCCTGCTTCAGGCTGGGGGTGGTTACAAAACAGGAATA | + |
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Preference number: 1 (lower is better) Translates to: GSTLGKLLSGSKVKV*LSLLQAGGGYKTGI Trigger: TATTCCTGTTTTGTAACCACCCCCAGCCTGAAGCAGGCTGAGCCAGACCTTGACCTTGCTGCCACTAAGAAGTTTACCTAGGGTGGAGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000194102.6 |
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| 3UTR GCA 90 bp | TTCCTTGCTGTCCATGATCTGTGGAGCCATCCGTGGGTAGGGAAGTaGAGGCCCAGTAGAAGCATCGGTGAAATTAGACTGAGGAAGCTT | + |
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Preference number: 1 (lower is better) Translates to: FLAVHDLWSHPWVGK*RPSRSIGEIRLRKL Trigger: AAGCTTCCTCAGTCTAATTTCACCGATGCTTCTACTGGGCCTGCACTTCCCTACCCACGGATGGCTCCACAGATCATGGACAGCAAGGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194102.6 |
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| 3UTR TCA 90 bp | GAGATGGAGGGTATTGGGAGCATATTCCATGGCTCCACTGAAAACTaGGATGATTGGCCAGATCTACAGGGTACTGTGGGAGTCAGGCAC | + |
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Preference number: 1 (lower is better) Translates to: EMEGIGSIFHGSTEN*DDWPDLQGTVGVRH Trigger: GTGCCTGACTCCCACAGTACCCTGTAGATCTGGCCAATCATCTCAGTTTTCAGTGGAGCCATGGAATATGCTCCCAATACCCTCCATCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193229.6 |
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| 3UTR CCA 90 bp | CTTATGAGAAGTCTGTTCACCCTGTCCACACCACAGCCATGCTGCTaGTCTGTGTTTACGTTGGCTGTTTCTCATGCGTTACCTGTCTTT | + |
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Preference number: 1 (lower is better) Translates to: LMRSLFTLSTPQPCC*SVFTLAVSHALPVF Trigger: AAAGACAGGTAACGCATGAGAAACAGCCAACGTAAACACAGACCAGCAGCATGGCTGTGGTGTGGACAGGGTGAACAGACTTCTCATAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193229.6 |
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| 3UTR GCA 90 bp | ACCACAGCCATGCTGCTGGTCTGTGTTTACGTTGGCTGTTTCTCATaGGTTACCTGTCTTTCCTCCCCACTTTCCAGGTATTTTAACACT | + |
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Preference number: 1 (lower is better) Translates to: TTAMLLVCVYVGCFS*VTCLSSPLSRYFNT Trigger: AGTGTTAAAATACCTGGAAAGTGGGGAGGAAAGACAGGTAACGCATGAGAAACAGCCAACGTAAACACAGACCAGCAGCATGGCTGTGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000193229.6 |
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| 3UTR CCA 90 bp | GTCAGGAGCGTGCCACCAAATCTGTTACTAAATAATGTGAAATTTTaGAGGTTTGGATCTGAAGCACCGGGGACGAGATTGGAACCTGAG | + |
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Preference number: 1 (lower is better) Translates to: VRSVPPNLLLNNVKF*RFGSEAPGTRLEPE Trigger: CTCAGGTTCCAATCTCGTCCCCGGTGCTTCAGATCCAAACCTCCAAAATTTCACATTATTTAGTAACAGATTTGGTGGCACGCTCCTGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000193229.6 |
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| 3UTR-3UTR CCA 90 bp | CTTAGTGGCAGCAAGGTCAAGGTCTGGCTCAGCCTGCTTCAGGCTGGGGGTGGTCTGTGGAGCCATCCGTaGGTAGGGAAGTGCAGGCCC | + |
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Preference number: 2 (lower is better) Translates to: LSGSKVKVWLSLLQAGGGLWSHP*VGKCRP Trigger: GGGCCTGCACTTCCCTACCCACGGATGGCTCCACAG...ACCACCCCCAGCCTGAAGCAGGCTGAGCCAGACCTTGACCTTGCTGCCACTAAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000194102.6 |
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| 3UTR-3UTR TCA 90 bp | TCCTCTCTCAGTGCCGGAGGAATGGTTGTCTCACAAAAGCTGCCACTGGTTTTCGCTGAGGACTTGCTCTaGGGGCAGGACGGCCAGTTT | + |
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Preference number: 2 (lower is better) Translates to: SSLSAGGMVVSQKLPLVFAEDLL*GQDGQF Trigger: AAACTGGCCGTCCTGCCCTCAGAGCAAGTCCTCAGC...GAAAACCAGTGGCAGCTTTTGTGAGACAACCATTCCTCCGGCACTGAGAGAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000193229.6 |
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| 3UTR-3UTR TCA 90 bp | CTTCCTCTCTCAGTGCCGGAGGAATGGTTGTCTCACAAAAGCTGCCACTGGTTTCAGGCTTGTGAGGGCTaGGGACTTGCTCTGAGGGCA | + |
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Preference number: 2 (lower is better) Translates to: LPLSVPEEWLSHKSCHWFQACEG*GLALRA Trigger: TGCCCTCAGAGCAAGTCCTCAGCCCTCACAAGCCTG...AAACCAGTGGCAGCTTTTGTGAGACAACCATTCCTCCGGCACTGAGAGAGGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193229.6 |
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| 3UTR-3UTR CCA 90 bp | TGTTGCTGTGAGGAAAATGGCATGGCCAGTCAGCAGCCACTTAGGAACAACATGGGCGCACGCAGCTGCTaGGTGTGCTTCCTCTCTCAG | + |
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Preference number: 2 (lower is better) Translates to: CCCEENGMASQQPLRNNMGARSC*VCFLSQ Trigger: CTGAGAGAGGAAGCACACCCAGCAGCTGCGTGCGCC...CATGTTGTTCCTAAGTGGCTGCTGACTGGCCATGCCATTTTCCTCACAGCAACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193229.6 |
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| 3UTR-3UTR CCA 90 bp | GGTTCCAAAGGCAGAGTCCACGGCAGGCTGAGGGGCCAGAACAGGAAGCGGGGAAAATGTGCTAGCATCTaGGGTCCAAGAGTTCAAATC | + |
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Preference number: 2 (lower is better) Translates to: GSKGRVHGRLRGQNRKRGKCASI*GPRVQI Trigger: GATTTGAACTCTTGGACCCCAGATGCTAGCACATTT...TCCCCGCTTCCTGTTCTGGCCCCTCAGCCTGCCGTGGACTCTGCCTTTGGAACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000193229.6 |
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| 3UTR-3UTR CCA 90 bp | TTAGTGGCAGCAAGGTCAAGGTCTGGCTCAGCCTGCTTCAGGCTGGGGGTGGTTAAACCAAAGAGAAGATaGGGATGTTGGCCCAGTCTT | + |
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Preference number: 2 (lower is better) Translates to: LVAARSRSGSACFRLGVVKPKRR*GCWPSL Trigger: AAGACTGGGCCAACATCCCCATCTTCTCTTTGGTTT...AACCACCCCCAGCCTGAAGCAGGCTGAGCCAGACCTTGACCTTGCTGCCACTAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000194102.6 |
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| 3UTR-3UTR CCA 90 bp | AGGCTACAGGTGACGATGTGCAGGATAGGGTGTAGTCTCTGGAATAGCTCAGTGAGCAAGGTCAAGGTCTaGCTCAGCCTGCTTCAGGCT | + |
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Preference number: 2 (lower is better) Translates to: RLQVTMCRIGCSLWNSSVSKVKV*LSLLQA Trigger: AGCCTGAAGCAGGCTGAGCCAGACCTTGACCTTGCT...CACTGAGCTATTCCAGAGACTACACCCTATCCTGCACATCGTCACCTGTAGCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194102.6 |
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| 3UTR CAA 90 bp | TTCACCCTGTCCACACCACAGCCATGCTGCTGGTCTGTGTTTACGTaGGCTGTTTCTCATGCGTTACCTGTCTTTCCTCCCCACTTTCCA | + |
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Preference number: 2 (lower is better) Translates to: FTLSTPQPCCWSVFT*AVSHALPVFPPHFP Trigger: TGGAAAGTGGGGAGGAAAGACAGGTAACGCATGAGAAACAGCCAACGTAAACACAGACCAGCAGCATGGCTGTGGTGTGGACAGGGTGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193229.6 |
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| 3UTR-3UTR TCA 90 bp | TACGTTGGCTGTTTCTCATGCGTTACCTGTCTTTCCTCCCCACTTTCCAGGTATCGGGGGTTCTTGACTTaGGTTTGTCAGGAGCGTGCC | + |
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Preference number: 2 (lower is better) Translates to: YVGCFSCVTCLSSPLSRYRGFLT*VCQERA Trigger: GGCACGCTCCTGACAAACTCAAGTCAAGAACCCCCG...ATACCTGGAAAGTGGGGAGGAAAGACAGGTAACGCATGAGAAACAGCCAACGTA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000193229.6 |
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| 3UTR-3UTR GCA 90 bp | GCTTCCTCTCTCAGTGCCGGAGGAATGGTTGTCTCACAAAAGCTGCCACTGGTTAAACGTCTTCTAGTCTaGCATTCTCCTCGGGGGTTC | + |
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Preference number: 2 (lower is better) Translates to: ASSLSAGGMVVSQKLPLVKRLLV*HSPRGF Trigger: GAACCCCCGAGGAGAATGGCAGACTAGAAGACGTTT...AACCAGTGGCAGCTTTTGTGAGACAACCATTCCTCCGGCACTGAGAGAGGAAGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000193229.6 |
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| 3UTR-3UTR CCA 90 bp | ACGATGTGCAGGATAGGGTGTAGTCTCTGGAATAGCTCAGTGGCCTCCCAGCAGTTCGGGTTTCTTCTCTaGAGCTGTTCTTGGAGGAGA | + |
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Preference number: 2 (lower is better) Translates to: TMCRIGCSLWNSSVASQQFGFLL*SCSWRR Trigger: TCTCCTCCAAGAACAGCTCCAGAGAAGAAACCCGAA...CTGCTGGGAGGCCACTGAGCTATTCCAGAGACTACACCCTATCCTGCACATCGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194102.6 |
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| 3UTR-3UTR CCA 90 bp | GAGGGGCCAGAACAGGAAGCGGGGATGATTGAATCCTCAACCTCAAACAGAAAGATCTACAGGGTACTGTaGGAGTCAGGCACATTCTAT | + |
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Preference number: 2 (lower is better) Translates to: EGPEQEAGMIESSTSNRKIYRVL*ESGTFY Trigger: ATAGAATGTGCCTGACTCCCACAGTACCCTGTAGAT...CTTTCTGTTTGAGGTTGAGGATTCAATCATCCCCGCTTCCTGTTCTGGCCCCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000193229.6 |
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| 3UTR-3UTR TCA 90 bp | CTGTGTTTACGTTGGCTGTTTCTCATGCGTTACCTGTCTTTCCTCCCCACTTTCGGCTCCACTGAAAACTaGGATGATTGGCCAGATCTA | + |
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Preference number: 2 (lower is better) Translates to: LCLRWLFLMRYLSFLPTFGSTEN*DDWPDL Trigger: TAGATCTGGCCAATCATCTCAGTTTTCAGTGGAGCC...GAAAGTGGGGAGGAAAGACAGGTAACGCATGAGAAACAGCCAACGTAAACACAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000193229.6 |
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| 3UTR-3UTR GCA 90 bp | TGTTGCTGTGAGGAAAATGGCATGGCCAGTCAGCAGCCACTTAGGAACAACATGTTGTCTCACAAAAGCTaGCACTGGTTTTCAGGCTTG | + |
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Preference number: 2 (lower is better) Translates to: CCCEENGMASQQPLRNNMLSHKS*HWFSGL Trigger: CAAGCCTGAAAACCAGTGGCAGCTTTTGTGAGACAA...CATGTTGTTCCTAAGTGGCTGCTGACTGGCCATGCCATTTTCCTCACAGCAACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000193229.6 |
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| 3UTR-3UTR CAA 90 bp | CTTAGTGGCAGCAAGGTCAAGGTCTGGCTCAGCCTGCTTCAGGCTGGGGGTGGTAACTTCCTGCTGACTTaGGGGTGGCGTGGCTCTGGG | + |
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Preference number: 3 (lower is better) Translates to: LSGSKVKVWLSLLQAGGGNFLLT*GWRGSG Trigger: CCCAGAGCCACGCCACCCCAAAGTCAGCAGGAAGTT...ACCACCCCCAGCCTGAAGCAGGCTGAGCCAGACCTTGACCTTGCTGCCACTAAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000194102.6 |
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| 3UTR TCA 72 bp | GGAGACCTTCTCATTCAAACCGGGTCACTTCCGCTCTaGGGCGCACGCAGCTGCTGGGTGTGCTTCCTCTCT | + |
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Preference number: 3 (lower is better) Translates to: GDLLIQTGSLPL*GARSCWVCFLS Trigger: AGAGAGGAAGCACACCCAGCAGCTGCGTGCGCCTCAGAGCGGAAGTGACCCGGTTTGAATGAGAAGGTCTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193229.6 |
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| 3UTR GCA 72 bp | GGCGCACGCAGCTGCTGGGTGTGCTTCCTCTCTCAGTaGCGGAGGAATGGTTGTCTCACAAAAGCTGCCACT | + |
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Preference number: 3 (lower is better) Translates to: GARSCWVCFLSQ*RRNGCLTKAAT Trigger: AGTGGCAGCTTTTGTGAGACAACCATTCCTCCGGCACTGAGAGAGGAAGCACACCCAGCAGCTGCGTGCGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193229.6 |
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| 3UTR CCA 72 bp | AGGAGAGTTGGCCGTTTCCTTGCTGTCCATGATCTGTaGAGCCATCCGTGGGTAGGGAAGTGCAGGCCCAGT | + |
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Preference number: 3 (lower is better) Translates to: RRVGRFLAVHDL*SHPWVGKCRPS Trigger: ACTGGGCCTGCACTTCCCTACCCACGGATGGCTCCACAGATCATGGACAGCAAGGAAACGGCCAACTCTCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194102.6 |
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| 3UTR CCA 72 bp | CGTTTCCTTGCTGTCCATGATCTGTGGAGCCATCCGTaGGTAGGGAAGTGCAGGCCCAGTAGAAGCATCGGT | + |
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Preference number: 3 (lower is better) Translates to: RFLAVHDLWSHP*VGKCRPSRSIG Trigger: ACCGATGCTTCTACTGGGCCTGCACTTCCCTACCCACGGATGGCTCCACAGATCATGGACAGCAAGGAAACG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194102.6 |
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| 3UTR CCA 72 bp | CAGCAAGGTCAAGGTCTGGCTCAGCCTGCTTCAGGCTaGGGGTGGTTACAAAACAGGAATAGGGTCGTTGTG | + |
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Preference number: 3 (lower is better) Translates to: QQGQGLAQPASG*GWLQNRNRVVV Trigger: CACAACGACCCTATTCCTGTTTTGTAACCACCCCCAGCCTGAAGCAGGCTGAGCCAGACCTTGACCTTGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000194102.6 |
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| 3UTR CCA 72 bp | CTACAGGTGACGATGTGCAGGATAGGGTGTAGTCTCTaGAATAGCTCAGTGGCCTCCCAGCAGGTAGCAGTG | + |
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Preference number: 3 (lower is better) Translates to: LQVTMCRIGCSL*NSSVASQQVAV Trigger: CACTGCTACCTGCTGGGAGGCCACTGAGCTATTCCAGAGACTACACCCTATCCTGCACATCGTCACCTGTAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194102.6 |
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| 3UTR GCA 72 bp | ATGGCATGGCCAGTCAGCAGCCACTTAGGAACAACATaGCGATTCTGGCTTCTGGTTCCAAAGGCAGAGTCC | + |
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Preference number: 3 (lower is better) Translates to: MAWPVSSHLGTT*RFWLLVPKAES Trigger: GGACTCTGCCTTTGGAACCAGAAGCCAGAATCGGCATGTTGTTCCTAAGTGGCTGCTGACTGGCCATGCCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193229.6 |
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| 3UTR GCA 72 bp | GTCCATGATCTGTGGAGCCATCCGTGGGTAGGGAAGTaGAGGCCCAGTAGAAGCATCGGTGAAATTAGACTG | + |
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Preference number: 3 (lower is better) Translates to: VHDLWSHPWVGK*RPSRSIGEIRL Trigger: CAGTCTAATTTCACCGATGCTTCTACTGGGCCTGCACTTCCCTACCCACGGATGGCTCCACAGATCATGGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194102.6 |
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| 3UTR CCA 72 bp | CCACACCACAGCCATGCTGCTGGTCTGTGTTTACGTTaGCTGTTTCTCATGCGTTACCTGTCTTTCCTCCCC | + |
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Preference number: 3 (lower is better) Translates to: PHHSHAAGLCLR*LFLMRYLSFLP Trigger: GGGGAGGAAAGACAGGTAACGCATGAGAAACAGCCAACGTAAACACAGACCAGCAGCATGGCTGTGGTGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193229.6 |
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| 3UTR GCA 72 bp | AGAAGTCTGTTCACCCTGTCCACACCACAGCCATGCTaGTGGTCTGTGTTTACGTTGGCTGTTTCTCATGCG | + |
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Preference number: 3 (lower is better) Translates to: RSLFTLSTPQPC*WSVFTLAVSHA Trigger: CGCATGAGAAACAGCCAACGTAAACACAGACCAGCAGCATGGCTGTGGTGTGGACAGGGTGAACAGACTTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193229.6 |
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| 3UTR CCA 72 bp | CTAGGTAAACTTCTTAGTGGCAGCAAGGTCAAGGTCTaGCTCAGCCTGCTTCAGGCTGGGGGTGGTTACAAA | + |
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Preference number: 3 (lower is better) Translates to: LGKLLSGSKVKV*LSLLQAGGGYK Trigger: TTTGTAACCACCCCCAGCCTGAAGCAGGCTGAGCCAGACCTTGACCTTGCTGCCACTAAGAAGTTTACCTAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000194102.6 |
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| 3UTR GCA 72 bp | ATTCTTGGAGCCTGGAACAGGCTACAGGTGACGATGTaGAGGATAGGGTGTAGTCTCTGGAATAGCTCAGTG | + |
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Preference number: 3 (lower is better) Translates to: ILGAWNRLQVTM*RIGCSLWNSSV Trigger: CACTGAGCTATTCCAGAGACTACACCCTATCCTGCACATCGTCACCTGTAGCCTGTTCCAGGCTCCAAGAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194102.6 |
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| 3UTR CCA 72 bp | AGTCTGTTCACCCTGTCCACACCACAGCCATGCTGCTaGTCTGTGTTTACGTTGGCTGTTTCTCATGCGTTA | + |
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Preference number: 3 (lower is better) Translates to: SLFTLSTPQPCC*SVFTLAVSHAL Trigger: TAACGCATGAGAAACAGCCAACGTAAACACAGACCAGCAGCATGGCTGTGGTGTGGACAGGGTGAACAGACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193229.6 |
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| 3UTR TCA 72 bp | CTTCTAGTCTGCCATTCTCCTCGGGGGTTCTTGACTTaGGTTTGTCAGGAGCGTGCCACCAAATCTGTTACT | + |
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Preference number: 3 (lower is better) Translates to: LLVCHSPRGFLT*VCQERATKSVT Trigger: AGTAACAGATTTGGTGGCACGCTCCTGACAAACTCAAGTCAAGAACCCCCGAGGAGAATGGCAGACTAGAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000193229.6 |
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| 3UTR TCA 72 bp | AGTGCAGGCCCAGTAGAAGCATCGGTGAAATTAGACTaGGGAAGCTTCGGGTTTCTTCTCTGGAGCTGTTCT | + |
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Preference number: 3 (lower is better) Translates to: SAGPVEASVKLD*GSFGFLLWSCS Trigger: AGAACAGCTCCAGAGAAGAAACCCGAAGCTTCCTCAGTCTAATTTCACCGATGCTTCTACTGGGCCTGCACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194102.6 |
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| 3UTR GCA 72 bp | ATGAGAAGTCTGTTCACCCTGTCCACACCACAGCCATaGTGCTGGTCTGTGTTTACGTTGGCTGTTTCTCAT | + |
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Preference number: 3 (lower is better) Translates to: MRSLFTLSTPQP*CWSVFTLAVSH Trigger: ATGAGAAACAGCCAACGTAAACACAGACCAGCAGCATGGCTGTGGTGTGGACAGGGTGAACAGACTTCTCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193229.6 |
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| 3UTR-3UTR CAA 90 bp | CTTCCTCTCTCAGTGCCGGAGGAATGGTTGTCTCACAAAAGCTGCCACTGGTTTTGGTCTGTGTTTACGTaGGCTGTTTCTCATGCGTTA | + |
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Preference number: 3 (lower is better) Translates to: LPLSVPEEWLSHKSCHWFWSVFT*AVSHAL Trigger: TAACGCATGAGAAACAGCCAACGTAAACACAGACCA...AAACCAGTGGCAGCTTTTGTGAGACAACCATTCCTCCGGCACTGAGAGAGGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000193229.6 |
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| 3UTR TCA 72 bp | GGTATTGGGAGCATATTCCATGGCTCCACTGAAAACTaGGATGATTGGCCAGATCTACAGGGTACTGTGGGA | + |
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Preference number: 3 (lower is better) Translates to: GIGSIFHGSTEN*DDWPDLQGTVG Trigger: TCCCACAGTACCCTGTAGATCTGGCCAATCATCTCAGTTTTCAGTGGAGCCATGGAATATGCTCCCAATACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193229.6 |
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| 3UTR GCA 72 bp | ATGCTGCTGGTCTGTGTTTACGTTGGCTGTTTCTCATaGGTTACCTGTCTTTCCTCCCCACTTTCCAGGTAT | + |
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Preference number: 3 (lower is better) Translates to: MLLVCVYVGCFS*VTCLSSPLSRY Trigger: ATACCTGGAAAGTGGGGAGGAAAGACAGGTAACGCATGAGAAACAGCCAACGTAAACACAGACCAGCAGCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193229.6 |
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| 3UTR CCA 72 bp | ATCAGACATTTTTCTGTTGCTGTGAGGAAAATGGCATaGCCAGTCAGCAGCCACTTAGGAACAACATGCCGA | + |
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Preference number: 3 (lower is better) Translates to: IRHFSVAVRKMA*PVSSHLGTTCR Trigger: TCGGCATGTTGTTCCTAAGTGGCTGCTGACTGGCCATGCCATTTTCCTCACAGCAACAGAAAAATGTCTGAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000193229.6 |
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| 3UTR CCA 72 bp | AAAACTGAGATGATTGGCCAGATCTACAGGGTACTGTaGGAGTCAGGCACATTCTATTCTTGGGAATCTTGG | + |
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Preference number: 3 (lower is better) Translates to: KTEMIGQIYRVL*ESGTFYSWESW Trigger: CCAAGATTCCCAAGAATAGAATGTGCCTGACTCCCACAGTACCCTGTAGATCTGGCCAATCATCTCAGTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193229.6 |
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| CDS-3UTR TCA 90 bp | GGCCCAGTCTTAGGAGAGTTGGCCGTTTCCTTGCTGTCCATGATCTGTGGAGCCGGAGCGGCTGCAGCCTaGCCCCAGAAGCTGGAGGTT | + |
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Preference number: 4 (lower is better) Translates to: GPVLGELAVSLLSMICGAGAAAA*PQKLEV Trigger: AACCTCCAGCTTCTGGGGTCAGGCTGCAGCCGCTCC...GGCTCCACAGATCATGGACAGCAAGGAAACGGCCAACTCTCCTAAGACTGGGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194102.6 |
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| CDS-3UTR GCA 90 bp | CTGTGGAGCCATCCGTGGGTAGGGAAGTGCAGGCCCAGTAGAAGCATCGGTGAAACTCCGAGGAGCGGCTaGAGCCTGACCCCAGAAGCT | + |
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Preference number: 4 (lower is better) Translates to: LWSHPWVGKCRPSRSIGETPRSG*SLTPEA Trigger: AGCTTCTGGGGTCAGGCTGCAGCCGCTCCTCGGAGT...TTCACCGATGCTTCTACTGGGCCTGCACTTCCCTACCCACGGATGGCTCCACAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194102.6 |
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| CDS-3UTR CCA 90 bp | CGGCAGGCTGAGGGGCCAGAACAGGAAGCGGGGATGATTGAATCCTCAACCTCACTTCCATCTATGGGATaGGAGGGTCTGGCTCTCAGC | + |
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Preference number: 4 (lower is better) Translates to: RQAEGPEQEAGMIESSTSLPSMG*EGLALS Trigger: GCTGAGAGCCAGACCCTCCCATCCCATAGATGGAAG...TGAGGTTGAGGATTCAATCATCCCCGCTTCCTGTTCTGGCCCCTCAGCCTGCCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000193229.6 |
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| CDS-3UTR CCA 90 bp | CATGATCTGTGGAGCCATCCGTGGGTAGGGAAGTGCAGGCCCAGTAGAAGCATCTCTCCCTCAAGGGCCTaGGTCTTGCCTGTGCTTAGG | + |
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Preference number: 4 (lower is better) Translates to: HDLWSHPWVGKCRPSRSISPSRA*VLPVLR Trigger: CCTAAGCACAGGCAAGACCCAGGCCCTTGAGGGAGA...GATGCTTCTACTGGGCCTGCACTTCCCTACCCACGGATGGCTCCACAGATCATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194102.6 |
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| CDS-3UTR TCA 90 bp | GGTTCCAAAGGCAGAGTCCACGGCAGGCTGAGGGGCCAGAACAGGAAGCGGGGATTCAAACACCAACTTTaGGGCTGGGATGATGTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: GSKGRVHGRLRGQNRKRGFKHQL*GWDDVC Trigger: ACACACATCATCCCAGCCTCAAAGTTGGTGTTTGAA...TCCCCGCTTCCTGTTCTGGCCCCTCAGCCTGCCGTGGACTCTGCCTTTGGAACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000193229.6 |
||
| CDS-3UTR TCA 90 bp | TCTGGCTTCTGGTTCCAAAGGCAGAGTCCACGGCAGGCTGAGGGGCCAGAACAGTGCCTGTGCTTAGGGTaGGAACTGGTTGAGATACTG | + |
|
Preference number: 4 (lower is better) Translates to: SGFWFQRQSPRQAEGPEQCLCLG*ELVEIL Trigger: CAGTATCTCAACCAGTTCTCACCCTAAGCACAGGCA...CTGTTCTGGCCCCTCAGCCTGCCGTGGACTCTGCCTTTGGAACCAGAAGCCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193229.6 |
||
| CDS-3UTR GCA 90 bp | CTTAGTGGCAGCAAGGTCAAGGTCTGGCTCAGCCTGCTTCAGGCTGGGGGTGGTAGGGAAACCACAGACTaGTGTGCAGCTTCATGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LSGSKVKVWLSLLQAGGGRETTD*CAASCC Trigger: ACAGCATGAAGCTGCACAGCAGTCTGTGGTTTCCCT...ACCACCCCCAGCCTGAAGCAGGCTGAGCCAGACCTTGACCTTGCTGCCACTAAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000194102.6 |
||
| CDS-3UTR TCA 90 bp | CCAGTCTTAGGAGAGTTGGCCGTTTCCTTGCTGTCCATGATCTGTGGAGCCATCGTGGTCCATGGAGGCTaGAGGGAAACCACAGACTGC | + |
|
Preference number: 4 (lower is better) Translates to: PVLGELAVSLLSMICGAIVVHGG*RETTDC Trigger: GCAGTCTGTGGTTTCCCTTCAGCCTCCATGGACCAC...GATGGCTCCACAGATCATGGACAGCAAGGAAACGGCCAACTCTCCTAAGACTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194102.6 |
||
| CDS-3UTR TCA 90 bp | ATGATTGGCCAGATCTACAGGGTACTGTGGGAGTCAGGCACATTCTATTCTTGGGGAGCGGCTGCAGCCTaGCCCCAGAAGCTGGAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: MIGQIYRVLWESGTFYSWGAAAA*PQKLEV Trigger: AACCTCCAGCTTCTGGGGTCAGGCTGCAGCCGCTCC...CCAAGAATAGAATGTGCCTGACTCCCACAGTACCCTGTAGATCTGGCCAATCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000193229.6 |
||
| CDS-3UTR TCA 90 bp | CTTAGTGGCAGCAAGGTCAAGGTCTGGCTCAGCCTGCTTCAGGCTGGGGGTGGTACTTTGAGGCTGGGATaGTGTGTGTTTGGAATCTCG | + |
|
Preference number: 4 (lower is better) Translates to: LSGSKVKVWLSLLQAGGGTLRLG*CVFGIS Trigger: CGAGATTCCAAACACACATCATCCCAGCCTCAAAGT...ACCACCCCCAGCCTGAAGCAGGCTGAGCCAGACCTTGACCTTGCTGCCACTAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000194102.6 |
||
| CDS-3UTR TCA 90 bp | CCAGTCTTAGGAGAGTTGGCCGTTTCCTTGCTGTCCATGATCTGTGGAGCCATCTGGGAAATGCCCTGCTaGCAAAGCTTCGGCGGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: PVLGELAVSLLSMICGAIWEMPC*QSFGGC Trigger: ACAGCCGCCGAAGCTTTGTCAGCAGGGCATTTCCCA...GATGGCTCCACAGATCATGGACAGCAAGGAAACGGCCAACTCTCCTAAGACTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194102.6 |
||
| CDS-3UTR GCA 90 bp | CTTAGTGGCAGCAAGGTCAAGGTCTGGCTCAGCCTGCTTCAGGCTGGGGGTGGTTTTCCTCAGGCTCATTaGTGTACACTGGCTGCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: LSGSKVKVWLSLLQAGGGFPQAH*CTLAAV Trigger: AACTGCAGCCAGTGTACAGCAATGAGCCTGAGGAAA...ACCACCCCCAGCCTGAAGCAGGCTGAGCCAGACCTTGACCTTGCTGCCACTAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000194102.6 |
||
| CDS-3UTR CCA 90 bp | CTTAGTGGCAGCAAGGTCAAGGTCTGGCTCAGCCTGCTTCAGGCTGGGGGTGGTAAAGAAAGTGGTCCATaGAGGCTGAAGGGAAACCAC | + |
|
Preference number: 4 (lower is better) Translates to: LSGSKVKVWLSLLQAGGGKESGP*RLKGNH Trigger: GTGGTTTCCCTTCAGCCTCCATGGACCACTTTCTTT...ACCACCCCCAGCCTGAAGCAGGCTGAGCCAGACCTTGACCTTGCTGCCACTAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000194102.6 |
||
| CDS-3UTR TCA 90 bp | TGTTGGCCCAGTCTTAGGAGAGTTGGCCGTTTCCTTGCTGTCCATGATCTGTGGCATATGGCAGGAATGTaGAACTCCGAGGAGCGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: CWPSLRRVGRFLAVHDLWHMAGM*NSEERL Trigger: CAGCCGCTCCTCGGAGTTTCACATTCCTGCCATATG...CCACAGATCATGGACAGCAAGGAAACGGCCAACTCTCCTAAGACTGGGCCAACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194102.6 |
||
| CDS-3UTR TCA 90 bp | GGCCCAGTCTTAGGAGAGTTGGCCGTTTCCTTGCTGTCCATGATCTGTGGAGCCTATACCAGGAGAATTTaGGGGGTCCTGGGACTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: GPVLGELAVSLLSMICGAYTRRI*GVLGLL Trigger: AAGGAGTCCCAGGACCCCTCAAATTCTCCTGGTATA...GGCTCCACAGATCATGGACAGCAAGGAAACGGCCAACTCTCCTAAGACTGGGCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000194102.6 |
||
| CDS-3UTR GCA 90 bp | TCTGGCTTCTGGTTCCAAAGGCAGAGTCCACGGCAGGCTGAGGGGCCAGAACAGTTCTATGCCTTTCTTTaGGTAGCACCTCAGAACCAC | + |
|
Preference number: 4 (lower is better) Translates to: SGFWFQRQSPRQAEGPEQFYAFL*VAPQNH Trigger: GTGGTTCTGAGGTGCTACGCAAAGAAAGGCATAGAA...CTGTTCTGGCCCCTCAGCCTGCCGTGGACTCTGCCTTTGGAACCAGAAGCCAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193229.6 |
||
| CDS-3UTR CCA 90 bp | GGCTCCACCCTAGGTAAACTTCTTAGTGGCAGCAAGGTCAAGGTCTGGCTCAGCCTCCTCGAAAGAAAGTaGTCCATGGAGGCTGAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: GSTLGKLLSGSKVKVWLSLLERK*SMEAEG Trigger: CCCTTCAGCCTCCATGGACCACTTTCTTTCGAGGAG...GCTGAGCCAGACCTTGACCTTGCTGCCACTAAGAAGTTTACCTAGGGTGGAGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194102.6 |
||
| CDS-3UTR CCA 90 bp | TCCACCCTAGGTAAACTTCTTAGTGGCAGCAAGGTCAAGGTCTGGCTCAGCCTGCTTCCATCTATGGGATaGGAGGGTCTGGCTCTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: STLGKLLSGSKVKVWLSLLPSMG*EGLALS Trigger: GCTGAGAGCCAGACCCTCCCATCCCATAGATGGAAG...CAGGCTGAGCCAGACCTTGACCTTGCTGCCACTAAGAAGTTTACCTAGGGTGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194102.6 |
||
| 3UTR CAA 72 bp | AGAGAAGATGGGGATGTTGGCCCAGTCTTAGGAGAGTaGGCCGTTTCCTTGCTGTCCATGATCTGTGGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: REDGDVGPVLGE*AVSLLSMICGA Trigger: GGCTCCACAGATCATGGACAGCAAGGAAACGGCCAACTCTCCTAAGACTGGGCCAACATCCCCATCTTCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194102.6 |
||
| CDS-3UTR TCA 90 bp | GCAGGCTCCACCCTAGGTAAACTTCTTAGTGGCAGCAAGGTCAAGGTCTGGCTCGAAGCTGGAGGTTTCTaGAGAAACAGAACTGGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: AGSTLGKLLSGSKVKVWLEAGGF*RNRTGA Trigger: GGCTCCAGTTCTGTTTCTTCAGAAACCTCCAGCTTC...GAGCCAGACCTTGACCTTGCTGCCACTAAGAAGTTTACCTAGGGTGGAGCCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194102.6 |
||
| CDS-3UTR TCA 90 bp | CGGCAGGCTGAGGGGCCAGAACAGGAAGCGGGGATGATTGAATCCTCAACCTCACTTTTACTGAGCAGTTaGGTAACAGCAACTGCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: RQAEGPEQEAGMIESSTSLLLSS*VTATAL Trigger: AAGGGCAGTTGCTGTTACTCAACTGCTCAGTAAAAG...TGAGGTTGAGGATTCAATCATCCCCGCTTCCTGTTCTGGCCCCTCAGCCTGCCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000193229.6 |
||
| CDS-3UTR TCA 90 bp | GGCTCCACCCTAGGTAAACTTCTTAGTGGCAGCAAGGTCAAGGTCTGGCTCAGCTGCCTGTGCTTAGGGTaGGAACTGGTTGAGATACTG | + |
|
Preference number: 4 (lower is better) Translates to: GSTLGKLLSGSKVKVWLSCLCLG*ELVEIL Trigger: CAGTATCTCAACCAGTTCTCACCCTAAGCACAGGCA...GCTGAGCCAGACCTTGACCTTGCTGCCACTAAGAAGTTTACCTAGGGTGGAGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194102.6 |
||
| CDS-3UTR GCA 90 bp | CTTAGTGGCAGCAAGGTCAAGGTCTGGCTCAGCCTGCTTCAGGCTGGGGGTGGTTTCAGACTCCTGATCTaGATGTTTCTGTCTTGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: LSGSKVKVWLSLLQAGGGFRLLI*MFLSWL Trigger: CAACCAAGACAGAAACATGCAGATCAGGAGTCTGAA...ACCACCCCCAGCCTGAAGCAGGCTGAGCCAGACCTTGACCTTGCTGCCACTAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000194102.6 |
||
| CDS-3UTR CCA 90 bp | AATAGGGTCGTTGTGATCTTTTGCAACTTCCTGCTGACTTTGGGGTGGCGTGGCCTGGACTTCCATCTATaGGATGGGAGGGTCTGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: NRVVVIFCNFLLTLGWRGLDFHL*DGRVWL Trigger: GAGCCAGACCCTCCCATCCCATAGATGGAAGTCCAG...GCCACGCCACCCCAAAGTCAGCAGGAAGTTGCAAAAGATCACAACGACCCTATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000194102.6 |
||
| 3UTR CAA 72 bp | TCCACACCACAGCCATGCTGCTGGTCTGTGTTTACGTaGGCTGTTTCTCATGCGTTACCTGTCTTTCCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: STPQPCCWSVFT*AVSHALPVFPP Trigger: GGGAGGAAAGACAGGTAACGCATGAGAAACAGCCAACGTAAACACAGACCAGCAGCATGGCTGTGGTGTGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193229.6 |
||
| CDS-3UTR TCA 90 bp | TACGTTGGCTGTTTCTCATGCGTTACCTGTCTTTCCTCCCCACTTTCCAGGTATTGGGAAATGCCCTGCTaGCAAAGCTTCGGCGGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: YVGCFSCVTCLSSPLSRYWEMPC*QSFGGC Trigger: ACAGCCGCCGAAGCTTTGTCAGCAGGGCATTTCCCA...ATACCTGGAAAGTGGGGAGGAAAGACAGGTAACGCATGAGAAACAGCCAACGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193229.6 |
||
| CDS-3UTR GCA 90 bp | TGTTGGCCCAGTCTTAGGAGAGTTGGCCGTTTCCTTGCTGTCCATGATCTGTGGTGCTGTGCAGCTTCATaGTGTCCATTGACAGGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: CWPSLRRVGRFLAVHDLWCCAAS*CPLTGV Trigger: GACTCCTGTCAATGGACAGCATGAAGCTGCACAGCA...CCACAGATCATGGACAGCAAGGAAACGGCCAACTCTCCTAAGACTGGGCCAACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194102.6 |
||
| CDS-3UTR GCA 90 bp | ACGATGTGCAGGATAGGGTGTAGTCTCTGGAATAGCTCAGTGGCCTCCCAGCAGACAGCAGGTGGAGCTTaGAGCACCAGAAAATCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: TMCRIGCSLWNSSVASQQTAGGA*STRKSS Trigger: TGAAGATTTTCTGGTGCTGCAAGCTCCACCTGCTGT...CTGCTGGGAGGCCACTGAGCTATTCCAGAGACTACACCCTATCCTGCACATCGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194102.6 |
||
| CDS-3UTR CCA 90 bp | GTCTGTGTTTACGTTGGCTGTTTCTCATGCGTTACCTGTCTTTCCTCCCCACTTTCTCCCTCAAGGGCCTaGGTCTTGCCTGTGCTTAGG | + |
|
Preference number: 4 (lower is better) Translates to: VCVYVGCFSCVTCLSSPLSPSRA*VLPVLR Trigger: CCTAAGCACAGGCAAGACCCAGGCCCTTGAGGGAGA...AAGTGGGGAGGAAAGACAGGTAACGCATGAGAAACAGCCAACGTAAACACAGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193229.6 |
||
| CDS-3UTR TCA 90 bp | ATGATTGGCCAGATCTACAGGGTACTGTGGGAGTCAGGCACATTCTATTCTTGGCATATGGCAGGAATGTaGAACTCCGAGGAGCGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: MIGQIYRVLWESGTFYSWHMAGM*NSEERL Trigger: CAGCCGCTCCTCGGAGTTTCACATTCCTGCCATATG...CCAAGAATAGAATGTGCCTGACTCCCACAGTACCCTGTAGATCTGGCCAATCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193229.6 |
||
| CDS-3UTR TCA 90 bp | GAGGGGCCAGAACAGGAAGCGGGGATGATTGAATCCTCAACCTCAAACAGAAAGTATACCAGGAGAATTTaGGGGGTCCTGGGACTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: EGPEQEAGMIESSTSNRKYTRRI*GVLGLL Trigger: AAGGAGTCCCAGGACCCCTCAAATTCTCCTGGTATA...CTTTCTGTTTGAGGTTGAGGATTCAATCATCCCCGCTTCCTGTTCTGGCCCCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000193229.6 |
||
| CDS-3UTR GCA 90 bp | GTTGGCCCAGTCTTAGGAGAGTTGGCCGTTTCCTTGCTGTCCATGATCTGTGGAAACCACAGACTGCTGTaGAGCTTCATGCTGTCCATT | + |
|
Preference number: 4 (lower is better) Translates to: VGPVLGELAVSLLSMICGNHRLL*SFMLSI Trigger: AATGGACAGCATGAAGCTGCACAGCAGTCTGTGGTT...TCCACAGATCATGGACAGCAAGGAAACGGCCAACTCTCCTAAGACTGGGCCAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194102.6 |
||
| CDS-3UTR GCA 90 bp | GCTTCCTCTCTCAGTGCCGGAGGAATGGTTGTCTCACAAAAGCTGCCACTGGTTACAGTAATACTCCCCTaGGTCACTGATGTTCACCTG | + |
|
Preference number: 4 (lower is better) Translates to: ASSLSAGGMVVSQKLPLVTVILP*VTDVHL Trigger: CAGGTGAACATCAGTGACGCAGGGGAGTATTACTGT...AACCAGTGGCAGCTTTTGTGAGACAACCATTCCTCCGGCACTGAGAGAGGAAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000193229.6 |
||
| CDS-3UTR GCA 90 bp | TCCACCCTAGGTAAACTTCTTAGTGGCAGCAAGGTCAAGGTCTGGCTCAGCCTGACAGTAATACTCCCCTaGGTCACTGATGTTCACCTG | + |
|
Preference number: 4 (lower is better) Translates to: STLGKLLSGSKVKVWLSLTVILP*VTDVHL Trigger: CAGGTGAACATCAGTGACGCAGGGGAGTATTACTGT...CAGGCTGAGCCAGACCTTGACCTTGCTGCCACTAAGAAGTTTACCTAGGGTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194102.6 |
||
| CDS-3UTR GCA 90 bp | TCACCCTGTCCACACCACAGCCATGCTGCTGGTCTGTGTTTACGTTGGCTGTTTTATGGTGATGGGAAATaGCCTGCTGACAAAGCTTCG | + |
|
Preference number: 4 (lower is better) Translates to: SPCPHHSHAAGLCLRWLFYGDGK*PADKAS Trigger: CGAAGCTTTGTCAGCAGGGCATTTCCCATCACCATA...AAACAGCCAACGTAAACACAGACCAGCAGCATGGCTGTGGTGTGGACAGGGTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193229.6 |
||
| CDS-3UTR GCA 90 bp | CCAGTCTTAGGAGAGTTGGCCGTTTCCTTGCTGTCCATGATCTGTGGAGCCATCTATGGTGATGGGAAATaGCCTGCTGACAAAGCTTCG | + |
|
Preference number: 4 (lower is better) Translates to: PVLGELAVSLLSMICGAIYGDGK*PADKAS Trigger: CGAAGCTTTGTCAGCAGGGCATTTCCCATCACCATA...GATGGCTCCACAGATCATGGACAGCAAGGAAACGGCCAACTCTCCTAAGACTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194102.6 |
||
| CDS-3UTR GCA 90 bp | TGTTGGCCCAGTCTTAGGAGAGTTGGCCGTTTCCTTGCTGTCCATGATCTGTGGTTGCTGTACACTGGCTaGAGTTCTATACAGGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: CWPSLRRVGRFLAVHDLWLLYTG*SSIQAG Trigger: ACCAGCCTGTATAGAACTGCAGCCAGTGTACAGCAA...CCACAGATCATGGACAGCAAGGAAACGGCCAACTCTCCTAAGACTGGGCCAACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194102.6 |
||
| CDS-3UTR CCA 90 bp | GAGGGGCCAGAACAGGAAGCGGGGATGATTGAATCCTCAACCTCAAACAGAAAGACACGTCAGGGTCACTaGACTTCCATCTATGGGATG | + |
|
Preference number: 4 (lower is better) Translates to: EGPEQEAGMIESSTSNRKTRQGH*TSIYGM Trigger: CATCCCATAGATGGAAGTCCAGTGACCCTGACGTGT...CTTTCTGTTTGAGGTTGAGGATTCAATCATCCCCGCTTCCTGTTCTGGCCCCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000193229.6 |
||
| CDS-3UTR CCA 90 bp | AGGCTACAGGTGACGATGTGCAGGATAGGGTGTAGTCTCTGGAATAGCTCAGTGACACGTCAGGGTCACTaGACTTCCATCTATGGGATG | + |
|
Preference number: 4 (lower is better) Translates to: RLQVTMCRIGCSLWNSSVTRQGH*TSIYGM Trigger: CATCCCATAGATGGAAGTCCAGTGACCCTGACGTGT...CACTGAGCTATTCCAGAGACTACACCCTATCCTGCACATCGTCACCTGTAGCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194102.6 |
||
| CDS-3UTR CCA 90 bp | GTTGGCCCAGTCTTAGGAGAGTTGGCCGTTTCCTTGCTGTCCATGATCTGTGGAGTACGTTGTAATAGGTaGGCTCCTGGGGTTCTGAAT | + |
|
Preference number: 4 (lower is better) Translates to: VGPVLGELAVSLLSMICGVRCNR*APGVLN Trigger: ATTCAGAACCCCAGGAGCCCACCTATTACAACGTAC...TCCACAGATCATGGACAGCAAGGAAACGGCCAACTCTCCTAAGACTGGGCCAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194102.6 |
||
| CDS-3UTR TCA 90 bp | CTTCCTCTCTCAGTGCCGGAGGAATGGTTGTCTCACAAAAGCTGCCACTGGTTTGCACTGGTATCTCTTTaGCTCTTCAGTCCATATGGC | + |
|
Preference number: 4 (lower is better) Translates to: LPLSVPEEWLSHKSCHWFALVSL*LFSPYG Trigger: GCCATATGGACTGAAGAGTCAAAGAGATACCAGTGC...AAACCAGTGGCAGCTTTTGTGAGACAACCATTCCTCCGGCACTGAGAGAGGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193229.6 |
||
| CDS-3UTR TCA 90 bp | AAGAGAAGATGGGGATGTTGGCCCAGTCTTAGGAGAGTTGGCCGTTTCCTTGCTGCACTGGTATCTCTTTaGCTCTTCAGTCCATATGGC | + |
|
Preference number: 4 (lower is better) Translates to: KRRWGCWPSLRRVGRFLAALVSL*LFSPYG Trigger: GCCATATGGACTGAAGAGTCAAAGAGATACCAGTGC...AGCAAGGAAACGGCCAACTCTCCTAAGACTGGGCCAACATCCCCATCTTCTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194102.6 |
||
| CDS-3UTR TCA 90 bp | GTTGGCCCAGTCTTAGGAGAGTTGGCCGTTTCCTTGCTGTCCATGATCTGTGGATTCAAACACCAACTTTaGGGCTGGGATGATGTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: VGPVLGELAVSLLSMICGFKHQL*GWDDVC Trigger: ACACACATCATCCCAGCCTCAAAGTTGGTGTTTGAA...TCCACAGATCATGGACAGCAAGGAAACGGCCAACTCTCCTAAGACTGGGCCAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194102.6 |
||
| CDS-3UTR TCA 90 bp | TCACCCTGTCCACACCACAGCCATGCTGCTGGTCTGTGTTTACGTTGGCTGTTTAGGGTGAGAACTGGTTaGGATACTGGGACTTTTATG | + |
|
Preference number: 4 (lower is better) Translates to: SPCPHHSHAAGLCLRWLFRVRTG*DTGTFM Trigger: CATAAAAGTCCCAGTATCTCAACCAGTTCTCACCCT...AAACAGCCAACGTAAACACAGACCAGCAGCATGGCTGTGGTGTGGACAGGGTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193229.6 |
||
| CDS-3UTR GCA 90 bp | AGATTGGAACCTGAGATTGTTCTTCTAAGAGATGGAGGGTATTGGGAGCATATTACTCCGAGGAGCGGCTaGAGCCTGACCCCAGAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: RLEPEIVLLRDGGYWEHITPRSG*SLTPEA Trigger: AGCTTCTGGGGTCAGGCTGCAGCCGCTCCTCGGAGT...AATATGCTCCCAATACCCTCCATCTCTTAGAAGAACAATCTCAGGTTCCAATCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193229.6 |
||
| CDS-3UTR GCA 90 bp | AATAGGGTCGTTGTGATCTTTTGCAACTTCCTGCTGACTTTGGGGTGGCGTGGCGGTAGGCTTTCCTCCTaGTTTTCTAGAGAACCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: NRVVVIFCNFLLTLGWRGGRLSS*FSREPA Trigger: TGCTGGTTCTCTAGAAAAGCAGGAGGAAAGCCTACC...GCCACGCCACCCCAAAGTCAGCAGGAAGTTGCAAAAGATCACAACGACCCTATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000194102.6 |
||
| CDS-3UTR CCA 90 bp | CATGATCTGTGGAGCCATCCGTGGGTAGGGAAGTGCAGGCCCAGTAGAAGCATCAATTACCAAAGCACCTaGGGTTTGCTTCACTGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: HDLWSHPWVGKCRPSRSINYQST*GLLHCF Trigger: AAAACAGTGAAGCAAACCCCAGGTGCTTTGGTAATT...GATGCTTCTACTGGGCCTGCACTTCCCTACCCACGGATGGCTCCACAGATCATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194102.6 |
||
| CDS-3UTR TCA 90 bp | TACGTTGGCTGTTTCTCATGCGTTACCTGTCTTTCCTCCCCACTTTCCAGGTATGAAGCTGGAGGTTTCTaGAGAAACAGAACTGGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: YVGCFSCVTCLSSPLSRYEAGGF*RNRTGA Trigger: GGCTCCAGTTCTGTTTCTTCAGAAACCTCCAGCTTC...ATACCTGGAAAGTGGGGAGGAAAGACAGGTAACGCATGAGAAACAGCCAACGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193229.6 |
||
| CDS-3UTR TCA 90 bp | AGGCTACAGGTGACGATGTGCAGGATAGGGTGTAGTCTCTGGAATAGCTCAGTGCTTTTACTGAGCAGTTaGGTAACAGCAACTGCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: RLQVTMCRIGCSLWNSSVLLLSS*VTATAL Trigger: AAGGGCAGTTGCTGTTACTCAACTGCTCAGTAAAAG...CACTGAGCTATTCCAGAGACTACACCCTATCCTGCACATCGTCACCTGTAGCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194102.6 |
||
| CDS-3UTR TCA 90 bp | AGGCTACAGGTGACGATGTGCAGGATAGGGTGTAGTCTCTGGAATAGCTCAGTGAGGGTGAGAACTGGTTaGGATACTGGGACTTTTATG | + |
|
Preference number: 4 (lower is better) Translates to: RLQVTMCRIGCSLWNSSVRVRTG*DTGTFM Trigger: CATAAAAGTCCCAGTATCTCAACCAGTTCTCACCCT...CACTGAGCTATTCCAGAGACTACACCCTATCCTGCACATCGTCACCTGTAGCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194102.6 |
||
| CDS-3UTR GCA 90 bp | AGGACGGCCAGTTTTCTCTCACCAGGGCAGCTTCCTTTAGCTTATGAGAAGTCTTTTCCTCAGGCTCATTaGTGTACACTGGCTGCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: RTASFLSPGQLPLAYEKSFPQAH*CTLAAV Trigger: AACTGCAGCCAGTGTACAGCAATGAGCCTGAGGAAA...AGACTTCTCATAAGCTAAAGGAAGCTGCCCTGGTGAGAGAAAACTGGCCGTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000193229.6 |
||
| CDS-3UTR GCA 90 bp | TCACCCTGTCCACACCACAGCCATGCTGCTGGTCTGTGTTTACGTTGGCTGTTTTTCAGACTCCTGATCTaGATGTTTCTGTCTTGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: SPCPHHSHAAGLCLRWLFFRLLI*MFLSWL Trigger: CAACCAAGACAGAAACATGCAGATCAGGAGTCTGAA...AAACAGCCAACGTAAACACAGACCAGCAGCATGGCTGTGGTGTGGACAGGGTGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000193229.6 |
||
| CDS-3UTR GCA 90 bp | ATGATTGGCCAGATCTACAGGGTACTGTGGGAGTCAGGCACATTCTATTCTTGGACAGCAGGTGGAGCTTaGAGCACCAGAAAATCATGC | + |
|
Preference number: 4 (lower is better) Translates to: MIGQIYRVLWESGTFYSWTAGGA*STRKSC Trigger: GCATGATTTTCTGGTGCTGCAAGCTCCACCTGCTGT...CCAAGAATAGAATGTGCCTGACTCCCACAGTACCCTGTAGATCTGGCCAATCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193229.6 |
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| CDS-3UTR CCA 90 bp | TCCTCTCTCAGTGCCGGAGGAATGGTTGTCTCACAAAAGCTGCCACTGGTTTTCTTTTTCTCAGCCATCTaGCACCTTGATCTTGGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: SSLSAGGMVVSQKLPLVFFFSAI*HLDLGL Trigger: AAGCCCAAGATCAAGGTGCCAGATGGCTGAGAAAAA...GAAAACCAGTGGCAGCTTTTGTGAGACAACCATTCCTCCGGCACTGAGAGAGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000193229.6 |
||
| 3UTR CAA 72 bp | TTTTGGAGGTTTGGATCTGAAGCACCGGGGACGAGATaGGAACCTGAGATTGTTCTTCTAAGAGATGGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: FWRFGSEAPGTR*EPEIVLLRDGG Trigger: CCCTCCATCTCTTAGAAGAACAATCTCAGGTTCCAATCTCGTCCCCGGTGCTTCAGATCCAAACCTCCAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000193229.6 |
||
| CDS-3UTR TCA 90 bp | CCAGTCTTAGGAGAGTTGGCCGTTTCCTTGCTGTCCATGATCTGTGGAGCCATCTCTGCACTGGAATTATaGACGCTGTACTTTGTTTAC | + |
|
Preference number: 4 (lower is better) Translates to: PVLGELAVSLLSMICGAISALEL*TLYFVY Trigger: GTAAACAAAGTACAGCGTTCATAATTCCAGTGCAGA...GATGGCTCCACAGATCATGGACAGCAAGGAAACGGCCAACTCTCCTAAGACTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194102.6 |
||
| CDS-3UTR TCA 90 bp | GTCTGTGTTTACGTTGGCTGTTTCTCATGCGTTACCTGTCTTTCCTCCCCACTTACTTTGAGGCTGGGATaGTGTGTGTTTGGAATCTCG | + |
|
Preference number: 4 (lower is better) Translates to: VCVYVGCFSCVTCLSSPLTLRLG*CVFGIS Trigger: CGAGATTCCAAACACACATCATCCCAGCCTCAAAGT...AAGTGGGGAGGAAAGACAGGTAACGCATGAGAAACAGCCAACGTAAACACAGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193229.6 |
||
| CDS-3UTR CCA 90 bp | GCAGGCTCCACCCTAGGTAAACTTCTTAGTGGCAGCAAGGTCAAGGTCTGGCTCCTTTGTTTACTAACTTaGGAATTCACTGTTTCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: AGSTLGKLLSGSKVKVWLLCLLT*EFTVSA Trigger: GGCAGAAACAGTGAATTCCCAAGTTAGTAAACAAAG...GAGCCAGACCTTGACCTTGCTGCCACTAAGAAGTTTACCTAGGGTGGAGCCTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194102.6 |
||
| CDS-3UTR CCA 90 bp | CTGTGTTTACGTTGGCTGTTTCTCATGCGTTACCTGTCTTTCCTCCCCACTTTCGTACGTTGTAATAGGTaGGCTCCTGGGGTTCTGAAT | + |
|
Preference number: 4 (lower is better) Translates to: LCLRWLFLMRYLSFLPTFVRCNR*APGVLN Trigger: ATTCAGAACCCCAGGAGCCCACCTATTACAACGTAC...GAAAGTGGGGAGGAAAGACAGGTAACGCATGAGAAACAGCCAACGTAAACACAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000193229.6 |
||
| CDS-3UTR TCA 90 bp | CTTCCTCTCTCAGTGCCGGAGGAATGGTTGTCTCACAAAAGCTGCCACTGGTTTTCTGCACTGGAATTATaGACGCTGTACTTTGTTTAC | + |
|
Preference number: 4 (lower is better) Translates to: LPLSVPEEWLSHKSCHWFSALEL*TLYFVY Trigger: GTAAACAAAGTACAGCGTTCATAATTCCAGTGCAGA...AAACCAGTGGCAGCTTTTGTGAGACAACCATTCCTCCGGCACTGAGAGAGGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000193229.6 |
||
| CDS-3UTR CCA 90 bp | AGATTGGAACCTGAGATTGTTCTTCTAAGAGATGGAGGGTATTGGGAGCATATTTCTCAGCACAGGCCGTaGGAACAACTCTTGGACTTG | + |
|
Preference number: 4 (lower is better) Translates to: RLEPEIVLLRDGGYWEHISQHRP*EQLLDL Trigger: CAAGTCCAAGAGTTGTTCCCACGGCCTGTGCTGAGA...AATATGCTCCCAATACCCTCCATCTCTTAGAAGAACAATCTCAGGTTCCAATCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193229.6 |
||
| CDS-3UTR CCA 90 bp | ATCGGTGAAATTAGACTGAGGAAGCTTCGGGTTTCTTCTCTGGAGCTGTTCTTGTTTTTCTCAGCCATCTaGCACCTTGATCTTGGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: IGEIRLRKLRVSSLELFLFFSAI*HLDLGL Trigger: AAGCCCAAGATCAAGGTGCCAGATGGCTGAGAAAAA...CAAGAACAGCTCCAGAGAAGAAACCCGAAGCTTCCTCAGTCTAATTTCACCGAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000194102.6 |
||
| CDS-3UTR GCA 90 bp | ATCGGTGAAATTAGACTGAGGAAGCTTCGGGTTTCTTCTCTGGAGCTGTTCTTGTCACTGTTTCTGCCTTaGACTGGTATCTCTTTGACT | + |
|
Preference number: 4 (lower is better) Translates to: IGEIRLRKLRVSSLELFLSLFLP*TGISLT Trigger: AGTCAAAGAGATACCAGTGCAAGGCAGAAACAGTGA...CAAGAACAGCTCCAGAGAAGAAACCCGAAGCTTCCTCAGTCTAATTTCACCGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194102.6 |
||
| CDS-3UTR CCA 90 bp | ATCGGTGAAATTAGACTGAGGAAGCTTCGGGTTTCTTCTCTGGAGCTGTTCTTGTACCATTTTGTTTTCTaGGGTACGGAGAAGCCGAAT | + |
|
Preference number: 4 (lower is better) Translates to: IGEIRLRKLRVSSLELFLYHFVF*GTEKPN Trigger: ATTCGGCTTCTCCGTACCCCAGAAAACAAAATGGTA...CAAGAACAGCTCCAGAGAAGAAACCCGAAGCTTCCTCAGTCTAATTTCACCGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000194102.6 |
||
| CDS-3UTR GCA 90 bp | AGATTGGAACCTGAGATTGTTCTTCTAAGAGATGGAGGGTATTGGGAGCATATTGGTAGGCTTTCCTCCTaGTTTTCTAGAGAACCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: RLEPEIVLLRDGGYWEHIGRLSS*FSREPA Trigger: TGCTGGTTCTCTAGAAAAGCAGGAGGAAAGCCTACC...AATATGCTCCCAATACCCTCCATCTCTTAGAAGAACAATCTCAGGTTCCAATCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193229.6 |
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| CDS-3UTR GCA 90 bp | AGATTGGAACCTGAGATTGTTCTTCTAAGAGATGGAGGGTATTGGGAGCATATTTTGCTGTACACTGGCTaGAGTTCTATACAGGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: RLEPEIVLLRDGGYWEHILLYTG*SSIQAG Trigger: ACCAGCCTGTATAGAACTGCAGCCAGTGTACAGCAA...AATATGCTCCCAATACCCTCCATCTCTTAGAAGAACAATCTCAGGTTCCAATCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193229.6 |
||
| CDS-3UTR CCA 90 bp | CCACCAAATCTGTTACTAAATAATGTGAAATTTTGGAGGTTTGGATCTGAAGCACTGGACTTCCATCTATaGGATGGGAGGGTCTGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: PPNLLLNNVKFWRFGSEALDFHL*DGRVWL Trigger: GAGCCAGACCCTCCCATCCCATAGATGGAAGTCCAG...TGCTTCAGATCCAAACCTCCAAAATTTCACATTATTTAGTAACAGATTTGGTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193229.6 |
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| CDS-3UTR CCA 90 bp | GTCTGTGTTTACGTTGGCTGTTTCTCATGCGTTACCTGTCTTTCCTCCCCACTTCTTTGTTTACTAACTTaGGAATTCACTGTTTCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: VCVYVGCFSCVTCLSSPLLCLLT*EFTVSA Trigger: GGCAGAAACAGTGAATTCCCAAGTTAGTAAACAAAG...AAGTGGGGAGGAAAGACAGGTAACGCATGAGAAACAGCCAACGTAAACACAGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193229.6 |
||
| CDS-3UTR GCA 90 bp | CCACCAAATCTGTTACTAAATAATGTGAAATTTTGGAGGTTTGGATCTGAAGCATCACTGTTTCTGCCTTaGACTGGTATCTCTTTGACT | + |
|
Preference number: 4 (lower is better) Translates to: PPNLLLNNVKFWRFGSEASLFLP*TGISLT Trigger: AGTCAAAGAGATACCAGTGCAAGGCAGAAACAGTGA...TGCTTCAGATCCAAACCTCCAAAATTTCACATTATTTAGTAACAGATTTGGTGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193229.6 |
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| CDS-3UTR CAA 90 bp | CTTAGTGGCAGCAAGGTCAAGGTCTGGCTCAGCCTGCTTCAGGCTGGGGGTGGTTCAAGGGCCTGGGTCTaGCCTGTGCTTAGGGTGAGA | + |
|
Preference number: 5 (lower is better) Translates to: LSGSKVKVWLSLLQAGGGSRAWV*PVLRVR Trigger: TCTCACCCTAAGCACAGGCAAGACCCAGGCCCTTGA...ACCACCCCCAGCCTGAAGCAGGCTGAGCCAGACCTTGACCTTGCTGCCACTAAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000194102.6 |
||
| CDS-3UTR CAA 90 bp | TCAAACCGGGTCACTTCCGCTCTGAGGCGCACGCAGCTGCTGGGTGTGCTTCCTTTCACCTGGGAGATCTaGAATTCTGCGTTGGAGGAC | + |
|
Preference number: 5 (lower is better) Translates to: SNRVTSALRRTQLLGVLPFTWEI*NSALED Trigger: GTCCTCCAACGCAGAATTCAAGATCTCCCAGGTGAA...AGGAAGCACACCCAGCAGCTGCGTGCGCCTCAGAGCGGAAGTGACCCGGTTTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193229.6 |
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| CDS-3UTR CAA 90 bp | CTTAGTGGCAGCAAGGTCAAGGTCTGGCTCAGCCTGCTTCAGGCTGGGGGTGGTTGGGATGATGTGTGTTaGGAATCTCGCAGAAGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: LSGSKVKVWLSLLQAGGGWDDVC*ESRRSS Trigger: AGAGCTTCTGCGAGATTCCAAACACACATCATCCCA...ACCACCCCCAGCCTGAAGCAGGCTGAGCCAGACCTTGACCTTGCTGCCACTAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000194102.6 |
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| CDS-3UTR CAA 90 bp | CTTCCTCTCTCAGTGCCGGAGGAATGGTTGTCTCACAAAAGCTGCCACTGGTTTTCAAGGGCCTGGGTCTaGCCTGTGCTTAGGGTGAGA | + |
|
Preference number: 5 (lower is better) Translates to: LPLSVPEEWLSHKSCHWFSRAWV*PVLRVR Trigger: TCTCACCCTAAGCACAGGCAAGACCCAGGCCCTTGA...AAACCAGTGGCAGCTTTTGTGAGACAACCATTCCTCCGGCACTGAGAGAGGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000193229.6 |
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| CDS-3UTR CAA 90 bp | ACGATGTGCAGGATAGGGTGTAGTCTCTGGAATAGCTCAGTGGCCTCCCAGCAGCAGCCATCTGGCACCTaGATCTTGGGCTTTCAGACT | + |
|
Preference number: 5 (lower is better) Translates to: TMCRIGCSLWNSSVASQQQPSGT*ILGFQT Trigger: AGTCTGAAAGCCCAAGATCAAGGTGCCAGATGGCTG...CTGCTGGGAGGCCACTGAGCTATTCCAGAGACTACACCCTATCCTGCACATCGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194102.6 |
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| CDS CCA 90 bp | CTGTTTCTGCCTTGCACTGGTATCTCTTTGACTCTTCAGTCCATATaGCAGGAATGTGAAACTCCGAGGAGCGGCTGCAGCCTGACCCCA | + |
|
Preference number: 5 (lower is better) Translates to: LFLPCTGISLTLQSI*QECETPRSGCSLTP Trigger: TGGGGTCAGGCTGCAGCCGCTCCTCGGAGTTTCACATTCCTGCCATATGGACTGAAGAGTCAAAGAGATACCAGTGCAAGGCAGAAACAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000049926.15 ENSMUST00000166297.7 ENSMUST00000178261.3 ENSMUST00000193229.6 ENSMUST00000194102.6 |
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| CDS-3UTR CAA 90 bp | CCAGTCTTAGGAGAGTTGGCCGTTTCCTTGCTGTCCATGATCTGTGGAGCCATCTTCACCTGGGAGATCTaGAATTCTGCGTTGGAGGAC | + |
|
Preference number: 5 (lower is better) Translates to: PVLGELAVSLLSMICGAIFTWEI*NSALED Trigger: GTCCTCCAACGCAGAATTCAAGATCTCCCAGGTGAA...GATGGCTCCACAGATCATGGACAGCAAGGAAACGGCCAACTCTCCTAAGACTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194102.6 |
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| CDS GCA 90 bp | GGAGCTTGCAGCACCAGAAAATCTTCAGAAAACTCTACGTTCACGTaGATGCTCGGAAGTAAGCTGTCGGCTTGGCACCAATACTCTCCG | + |
|
Preference number: 5 (lower is better) Translates to: GACSTRKSSENSTFT*MLGSKLSAWHQYSP Trigger: CGGAGAGTATTGGTGCCAAGCCGACAGCTTACTTCCGAGCATGCACGTGAACGTAGAGTTTTCTGAAGATTTTCTGGTGCTGCAAGCTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000049926.15 ENSMUST00000178261.3 ENSMUST00000194102.6 |
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| CDS CCA 90 bp | TGTACACTGGCTGCAGTTCTATACAGGCTGGTACGTTGTAATAGGTaGGCTCCTGGGGTTCTGAATCTGAAGGGTTCCTGGAGTCATCAG | + |
|
Preference number: 5 (lower is better) Translates to: CTLAAVLYRLVRCNR*APGVLNLKGSWSHQ Trigger: CTGATGACTCCAGGAACCCTTCAGATTCAGAACCCCAGGAGCCCACCTATTACAACGTACCAGCCTGTATAGAACTGCAGCCAGTGTACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000049926.15 ENSMUST00000166297.7 ENSMUST00000178261.3 ENSMUST00000193229.6 ENSMUST00000194102.6 |
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| CDS-3UTR CAA 90 bp | CATGATCTGTGGAGCCATCCGTGGGTAGGGAAGTGCAGGCCCAGTAGAAGCATCCGAAGTGCATTTGTATaGACCGTTGTCCTTCAGATT | + |
|
Preference number: 5 (lower is better) Translates to: HDLWSHPWVGKCRPSRSIRSAFV*TVVLQI Trigger: AATCTGAAGGACAACGGTCAATACAAATGCACTTCG...GATGCTTCTACTGGGCCTGCACTTCCCTACCCACGGATGGCTCCACAGATCATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194102.6 |
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| CDS-3UTR CAA 90 bp | GTTGGCCCAGTCTTAGGAGAGTTGGCCGTTTCCTTGCTGTCCATGATCTGTGGACCTTTTACTGAGCAGTaGAGTAACAGCAACTGCCCT | + |
|
Preference number: 5 (lower is better) Translates to: VGPVLGELAVSLLSMICGPFTEQ*SNSNCP Trigger: AGGGCAGTTGCTGTTACTCAACTGCTCAGTAAAAGG...TCCACAGATCATGGACAGCAAGGAAACGGCCAACTCTCCTAAGACTGGGCCAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194102.6 |
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| CDS-3UTR CAA 90 bp | TGTTGGCCCAGTCTTAGGAGAGTTGGCCGTTTCCTTGCTGTCCATGATCTGTGGAGAGCCCCTCTGGGATaGACAATGAAGTGTCATCAA | + |
|
Preference number: 5 (lower is better) Translates to: CWPSLRRVGRFLAVHDLWRAPLG*TMKCHQ Trigger: TTGATGACACTTCATTGTCAATCCCAGAGGGGCTCT...CCACAGATCATGGACAGCAAGGAAACGGCCAACTCTCCTAAGACTGGGCCAACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194102.6 |
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| CDS GCA 90 bp | CTTGCAGCACCAGAAAATCTTCAGAAAACTCTACGTTCACGTGCATaGTCGGAAGTAAGCTGTCGGCTTGGCACCAATACTCTCCGGACT | + |
|
Preference number: 5 (lower is better) Translates to: LAAPENLQKTLRSRA*SEVSCRLGTNTLRT Trigger: AGTCCGGAGAGTATTGGTGCCAAGCCGACAGCTTACTTCCGAGCATGCACGTGAACGTAGAGTTTTCTGAAGATTTTCTGGTGCTGCAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000049926.15 ENSMUST00000178261.3 ENSMUST00000194102.6 |
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| CDS GCA 90 bp | GACAAAGCTTCGGCGGCTGTTGTTAGCTTCACAGTAATACTCCCCTaGGTCACTGATGTTCACCTGGGAGATCTTGAATTCTGCGTTGGA | + |
|
Preference number: 5 (lower is better) Translates to: DKASAAVVSFTVILP*VTDVHLGDLEFCVG Trigger: TCCAACGCAGAATTCAAGATCTCCCAGGTGAACATCAGTGACGCAGGGGAGTATTACTGTGAAGCTAACAACAGCCGCCGAAGCTTTGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000049926.15 ENSMUST00000166297.7 ENSMUST00000178261.3 ENSMUST00000193229.6 ENSMUST00000194102.6 |
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| CDS-3UTR CAA 90 bp | GCTTCCTCTCTCAGTGCCGGAGGAATGGTTGTCTCACAAAAGCTGCCACTGGTTTTCACTGTTTCTGCCTaGCACTGGTATCTCTTTGAC | + |
|
Preference number: 5 (lower is better) Translates to: ASSLSAGGMVVSQKLPLVFTVSA*HWYLFD Trigger: GTCAAAGAGATACCAGTGCAAGGCAGAAACAGTGAA...AACCAGTGGCAGCTTTTGTGAGACAACCATTCCTCCGGCACTGAGAGAGGAAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000193229.6 |
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| CDS-3UTR CAA 90 bp | TCCTCTCTCAGTGCCGGAGGAATGGTTGTCTCACAAAAGCTGCCACTGGTTTTCCCTTTTACTGAGCAGTaGAGTAACAGCAACTGCCCT | + |
|
Preference number: 5 (lower is better) Translates to: SSLSAGGMVVSQKLPLVFPFTEQ*SNSNCP Trigger: AGGGCAGTTGCTGTTACTCAACTGCTCAGTAAAAGG...GAAAACCAGTGGCAGCTTTTGTGAGACAACCATTCCTCCGGCACTGAGAGAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000193229.6 |
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| CDS-3UTR CAA 90 bp | CCAGTCTTAGGAGAGTTGGCCGTTTCCTTGCTGTCCATGATCTGTGGAGCCATCCAAAGCACCTGGGGTTaGCTTCACTGTTTTTCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: PVLGELAVSLLSMICGAIQSTWG*LHCFSF Trigger: AAAAGAAAAACAGTGAAGCAAACCCCAGGTGCTTTG...GATGGCTCCACAGATCATGGACAGCAAGGAAACGGCCAACTCTCCTAAGACTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000194102.6 |
||
| CDS-3UTR CAA 90 bp | GAGGGGCCAGAACAGGAAGCGGGGATGATTGAATCCTCAACCTCAAACAGAAAGCTGCATGTTTCTGTCTaGGTTGAGTTCTCCGTACTT | + |
|
Preference number: 5 (lower is better) Translates to: EGPEQEAGMIESSTSNRKLHVSV*VEFSVL Trigger: AAGTACGGAGAACTCAACCAAGACAGAAACATGCAG...CTTTCTGTTTGAGGTTGAGGATTCAATCATCCCCGCTTCCTGTTCTGGCCCCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000193229.6 |
||
| CDS-3UTR CAA 90 bp | AAGAGAAGATGGGGATGTTGGCCCAGTCTTAGGAGAGTTGGCCGTTTCCTTGCTCTGCATGTTTCTGTCTaGGTTGAGTTCTCCGTACTT | + |
|
Preference number: 5 (lower is better) Translates to: KRRWGCWPSLRRVGRFLALHVSV*VEFSVL Trigger: AAGTACGGAGAACTCAACCAAGACAGAAACATGCAG...AGCAAGGAAACGGCCAACTCTCCTAAGACTGGGCCAACATCCCCATCTTCTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194102.6 |
||
| CDS-3UTR CAA 90 bp | TTACGTTGGCTGTTTCTCATGCGTTACCTGTCTTTCCTCCCCACTTTCCAGGTATGGGATGATGTGTGTTaGGAATCTCGCAGAAGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: LRWLFLMRYLSFLPTFQVWDDVC*ESRRSS Trigger: AGAGCTTCTGCGAGATTCCAAACACACATCATCCCA...TACCTGGAAAGTGGGGAGGAAAGACAGGTAACGCATGAGAAACAGCCAACGTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193229.6 |
||
| CDS TCA 90 bp | ACTAACTTGGGAATTCACTGTTTCTGCCTTGCACTGGTATCTCTTTaGCTCTTCAGTCCATATGGCAGGAATGTGAAACTCCGAGGAGCG | + |
|
Preference number: 5 (lower is better) Translates to: TNLGIHCFCLALVSL*LFSPYGRNVKLRGA Trigger: CGCTCCTCGGAGTTTCACATTCCTGCCATATGGACTGAAGAGTCAAAGAGATACCAGTGCAAGGCAGAAACAGTGAATTCCCAAGTTAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000049926.15 ENSMUST00000166297.7 ENSMUST00000178261.3 ENSMUST00000193229.6 ENSMUST00000194102.6 |
||
| CDS CCA 90 bp | AACTGCCCTTCAAACACCAACTTTGAGGCTGGGATGATGTGTGTTTaGAATCTCGCAGAAGCTCTCTGCACTGGAATTATGAACGCTGTA | + |
|
Preference number: 5 (lower is better) Translates to: NCPSNTNFEAGMMCV*NLAEALCTGIMNAV Trigger: TACAGCGTTCATAATTCCAGTGCAGAGAGCTTCTGCGAGATTCCAAACACACATCATCCCAGCCTCAAAGTTGGTGTTTGAAGGGCAGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000049926.15 ENSMUST00000166297.7 ENSMUST00000178261.3 ENSMUST00000193229.6 ENSMUST00000194102.6 |
||
| CDS CCA 90 bp | TACTTCTGTGTAAATCACGTTTTCCTCAGGCTCATTGCTGTACACTaGCTGCAGTTCTATACAGGCTGGTACGTTGTAATAGGTGGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: YFCVNHVFLRLIAVH*LQFYTGWYVVIGGL Trigger: GAGCCCACCTATTACAACGTACCAGCCTGTATAGAACTGCAGCCAGTGTACAGCAATGAGCCTGAGGAAAACGTGATTTACACAGAAGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000049926.15 ENSMUST00000166297.7 ENSMUST00000178261.3 ENSMUST00000193229.6 ENSMUST00000194102.6 |
||
| CDS-3UTR CAA 90 bp | TCCTCTCTCAGTGCCGGAGGAATGGTTGTCTCACAAAAGCTGCCACTGGTTTTCCGTTGTCCTTCAGATTaGCACGATGAATATAGAACT | + |
|
Preference number: 5 (lower is better) Translates to: SSLSAGGMVVSQKLPLVFRCPSD*HDEYRT Trigger: AGTTCTATATTCATCGTGCAAATCTGAAGGACAACG...GAAAACCAGTGGCAGCTTTTGTGAGACAACCATTCCTCCGGCACTGAGAGAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000193229.6 |
||
| CDS-3UTR CAA 90 bp | AATAGGGTCGTTGTGATCTTTTGCAACTTCCTGCTGACTTTGGGGTGGCGTGGCCGTTGTCCTTCAGATTaGCACGATGAATATAGAACT | + |
|
Preference number: 5 (lower is better) Translates to: NRVVVIFCNFLLTLGWRGRCPSD*HDEYRT Trigger: AGTTCTATATTCATCGTGCAAATCTGAAGGACAACG...GCCACGCCACCCCAAAGTCAGCAGGAAGTTGCAAAAGATCACAACGACCCTATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000194102.6 |
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| CDS GCA 90 bp | GAGTTCTCCGTACTTCTGTGTAAATCACGTTTTCCTCAGGCTCATTaGTGTACACTGGCTGCAGTTCTATACAGGCTGGTACGTTGTAAT | + |
|
Preference number: 5 (lower is better) Translates to: EFSVLLCKSRFPQAH*CTLAAVLYRLVRCN Trigger: ATTACAACGTACCAGCCTGTATAGAACTGCAGCCAGTGTACAGCAATGAGCCTGAGGAAAACGTGATTTACACAGAAGTACGGAGAACTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000049926.15 ENSMUST00000166297.7 ENSMUST00000178261.3 ENSMUST00000193229.6 ENSMUST00000194102.6 |
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| CDS-3UTR CAA 90 bp | TTACGTTGGCTGTTTCTCATGCGTTACCTGTCTTTCCTCCCCACTTTCCAGGTACGAAGTGCATTTGTATaGACCGTTGTCCTTCAGATT | + |
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Preference number: 5 (lower is better) Translates to: LRWLFLMRYLSFLPTFQVRSAFV*TVVLQI Trigger: AATCTGAAGGACAACGGTCAATACAAATGCACTTCG...TACCTGGAAAGTGGGGAGGAAAGACAGGTAACGCATGAGAAACAGCCAACGTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193229.6 |
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| CDS-3UTR CAA 90 bp | GGGTGGTTACAAAACAGGAATAGGGTCGTTGTGATCTTTTGCAACTTCCTGCTGTTCACTGTTTCTGCCTaGCACTGGTATCTCTTTGAC | + |
|
Preference number: 5 (lower is better) Translates to: GWLQNRNRVVVIFCNFLLFTVSA*HWYLFD Trigger: GTCAAAGAGATACCAGTGCAAGGCAGAAACAGTGAA...CAGCAGGAAGTTGCAAAAGATCACAACGACCCTATTCCTGTTTTGTAACCACCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000194102.6 |
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| CDS-3UTR CAA 90 bp | AGATTGGAACCTGAGATTGTTCTTCTAAGAGATGGAGGGTATTGGGAGCATATTCAGCCATCTGGCACCTaGATCTTGGGCTTTCAGACT | + |
|
Preference number: 5 (lower is better) Translates to: RLEPEIVLLRDGGYWEHIQPSGT*ILGFQT Trigger: AGTCTGAAAGCCCAAGATCAAGGTGCCAGATGGCTG...AATATGCTCCCAATACCCTCCATCTCTTAGAAGAACAATCTCAGGTTCCAATCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193229.6 |
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| CDS CCA 90 bp | GCTCTCTGCACTGGAATTATGAACGCTGTACTTTGTTTACTAACTTaGGAATTCACTGTTTCTGCCTTGCACTGGTATCTCTTTGACTCT | + |
|
Preference number: 5 (lower is better) Translates to: ALCTGIMNAVLCLLT*EFTVSALHWYLFDS Trigger: AGAGTCAAAGAGATACCAGTGCAAGGCAGAAACAGTGAATTCCCAAGTTAGTAAACAAAGTACAGCGTTCATAATTCCAGTGCAGAGAGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000049926.15 ENSMUST00000166297.7 ENSMUST00000178261.3 ENSMUST00000193229.6 ENSMUST00000194102.6 |
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| CDS-3UTR CAA 90 bp | CCACCAAATCTGTTACTAAATAATGTGAAATTTTGGAGGTTTGGATCTGAAGCAAGAGCCCCTCTGGGATaGACAATGAAGTGTCATCAA | + |
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Preference number: 5 (lower is better) Translates to: PPNLLLNNVKFWRFGSEARAPLG*TMKCHQ Trigger: TTGATGACACTTCATTGTCAATCCCAGAGGGGCTCT...TGCTTCAGATCCAAACCTCCAAAATTTCACATTATTTAGTAACAGATTTGGTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000193229.6 |
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| CDS CCA 72 bp | CAGTGTGACGACCTCTCCTCGAAAGAAAGTGGTCCATaGAGGCTGAAGGGAAACCACAGACTGCTGTGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: QCDDLSSKESGP*RLKGNHRLLCS Trigger: GCTGCACAGCAGTCTGTGGTTTCCCTTCAGCCTCCATGGACCACTTTCTTTCGAGGAGAGGTCGTCACACTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049926.15 ENSMUST00000178261.3 ENSMUST00000194102.6 |
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| CDS GCA 72 bp | GGTCCATGGAGGCTGAAGGGAAACCACAGACTGCTGTaGAGCTTCATGCTGTCCATTGACAGGAGTCACAAC | + |
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Preference number: 6 (lower is better) Translates to: GPWRLKGNHRLL*SFMLSIDRSHN Trigger: GTTGTGACTCCTGTCAATGGACAGCATGAAGCTGCACAGCAGTCTGTGGTTTCCCTTCAGCCTCCATGGACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049926.15 ENSMUST00000194102.6 |
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| CDS CAA 72 bp | GGCTCTCAGCACAGGCCGTGGGAACAACTCTTGGACTaGAACTACGACCGTATTGGAAGTATAGAGGGACCC | + |
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Preference number: 6 (lower is better) Translates to: GSQHRPWEQLLD*NYDRIGSIEGP Trigger: GGGTCCCTCTATACTTCCAATACGGTCGTAGTTCAAGTCCAAGAGTTGTTCCCACGGCCTGTGCTGAGAGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000049926.15 ENSMUST00000166297.7 ENSMUST00000178261.3 ENSMUST00000193229.6 ENSMUST00000194102.6 |
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| CDS CCA 72 bp | CCTTGCACTGGTATCTCTTTGACTCTTCAGTCCATATaGCAGGAATGTGAAACTCCGAGGAGCGGCTGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: PCTGISLTLQSI*QECETPRSGCS Trigger: GCTGCAGCCGCTCCTCGGAGTTTCACATTCCTGCCATATGGACTGAAGAGTCAAAGAGATACCAGTGCAAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000049926.15 ENSMUST00000166297.7 ENSMUST00000178261.3 ENSMUST00000193229.6 ENSMUST00000194102.6 |
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| CDS CCA 72 bp | GCTGCAGTTCTATACAGGCTGGTACGTTGTAATAGGTaGGCTCCTGGGGTTCTGAATCTGAAGGGTTCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: AAVLYRLVRCNR*APGVLNLKGSW Trigger: CCAGGAACCCTTCAGATTCAGAACCCCAGGAGCCCACCTATTACAACGTACCAGCCTGTATAGAACTGCAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000049926.15 ENSMUST00000166297.7 ENSMUST00000178261.3 ENSMUST00000193229.6 ENSMUST00000194102.6 |
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| CDS CAA 72 bp | GAAACCACAGACTGCTGTGCAGCTTCATGCTGTCCATaGACAGGAGTCACAACCAGTAGAGTCAGCCACATC | + |
|
Preference number: 6 (lower is better) Translates to: ETTDCCAASCCP*TGVTTSRVSHI Trigger: GATGTGGCTGACTCTACTGGTTGTGACTCCTGTCAATGGACAGCATGAAGCTGCACAGCAGTCTGTGGTTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049926.15 ENSMUST00000194102.6 |
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| CDS CAA 72 bp | GGTGGAGCTTGCAGCACCAGAAAATCATGCTGTCCATaGACAGGAGTCACAACCAGTAGAGTCAGCCACATC | + |
|
Preference number: 6 (lower is better) Translates to: GGACSTRKSCCP*TGVTTSRVSHI Trigger: GATGTGGCTGACTCTACTGGTTGTGACTCCTGTCAATGGACAGCATGATTTTCTGGTGCTGCAAGCTCCACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166297.7 ENSMUST00000193229.6 |
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| CDS CAA 90 bp | AACACAGCAGGTGGAGCTTGCAGCACCAGAAAATCATGCTGTCCATaGACAGGAGTCACAACCAGTAGAGTCAGCCACATCTGTGTGAAC | + |
|
Preference number: 6 (lower is better) Translates to: NTAGGACSTRKSCCP*TGVTTSRVSHICVN Trigger: GTTCACACAGATGTGGCTGACTCTACTGGTTGTGACTCCTGTCAATGGACAGCATGATTTTCTGGTGCTGCAAGCTCCACCTGCTGTGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166297.7 ENSMUST00000193229.6 |
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| CDS TCA 72 bp | AAACCACAGACTGCTGTGCAGCTTCATGCTGTCCATTaGCAGGAGTCACAACCAGTAGAGTCAGCCACATCT | + |
|
Preference number: 6 (lower is better) Translates to: KPQTAVQLHAVH*QESQPVESATS Trigger: AGATGTGGCTGACTCTACTGGTTGTGACTCCTGTCAATGGACAGCATGAAGCTGCACAGCAGTCTGTGGTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049926.15 ENSMUST00000194102.6 |
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| CDS TCA 72 bp | GTGGAGCTTGCAGCACCAGAAAATCATGCTGTCCATTaGCAGGAGTCACAACCAGTAGAGTCAGCCACATCT | + |
|
Preference number: 6 (lower is better) Translates to: VELAAPENHAVH*QESQPVESATS Trigger: AGATGTGGCTGACTCTACTGGTTGTGACTCCTGTCAATGGACAGCATGATTTTCTGGTGCTGCAAGCTCCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166297.7 ENSMUST00000193229.6 |
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| CDS GCA 72 bp | TCGGCGGCTGTTGTTAGCTTCACAGTAATACTCCCCTaGGTCACTGATGTTCACCTGGGAGATCTTGAATTC | + |
|
Preference number: 6 (lower is better) Translates to: SAAVVSFTVILP*VTDVHLGDLEF Trigger: GAATTCAAGATCTCCCAGGTGAACATCAGTGACGCAGGGGAGTATTACTGTGAAGCTAACAACAGCCGCCGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000049926.15 ENSMUST00000166297.7 ENSMUST00000178261.3 ENSMUST00000193229.6 ENSMUST00000194102.6 |
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| CDS GCA 72 bp | AACACAGCAGGTGGAGCTTGCAGCACCAGAAAATCATaGTGTCCATTGACAGGAGTCACAACCAGTAGAGTC | + |
|
Preference number: 6 (lower is better) Translates to: NTAGGACSTRKS*CPLTGVTTSRV Trigger: GACTCTACTGGTTGTGACTCCTGTCAATGGACAGCATGATTTTCTGGTGCTGCAAGCTCCACCTGCTGTGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166297.7 ENSMUST00000193229.6 |
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| CDS GCA 72 bp | GGGACTCCTTTTACTGAGCAGTTGAGTAACAGCAACTaGCCTTCAAACACCAACTTTGAGGCTGGGATGATG | + |
|
Preference number: 6 (lower is better) Translates to: GTPFTEQLSNSN*PSNTNFEAGMM Trigger: CATCATCCCAGCCTCAAAGTTGGTGTTTGAAGGGCAGTTGCTGTTACTCAACTGCTCAGTAAAAGGAGTCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000049926.15 ENSMUST00000166297.7 ENSMUST00000178261.3 ENSMUST00000193229.6 ENSMUST00000194102.6 |
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| CDS CAA 72 bp | GAATTCATACAGGATACATGGAGAGCCCCTCTGGGATaGACAATGAAGTGTCATCAAGTCTCCCTCAAGGGC | + |
|
Preference number: 6 (lower is better) Translates to: EFIQDTWRAPLG*TMKCHQVSLKG Trigger: GCCCTTGAGGGAGACTTGATGACACTTCATTGTCAATCCCAGAGGGGCTCTCCATGTATCCTGTATGAATTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000049926.15 ENSMUST00000166297.7 ENSMUST00000178261.3 ENSMUST00000193229.6 ENSMUST00000194102.6 |
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| CDS GCA 72 bp | CAGAGCTTTACCATCCTTGTAAAATGTCAGGGTCTCTaGTTCTATGCCTTTCTTTGCGTAGCACCTCAGAAC | + |
|
Preference number: 6 (lower is better) Translates to: QSFTILVKCQGL*FYAFLCVAPQN Trigger: GTTCTGAGGTGCTACGCAAAGAAAGGCATAGAAGCAGAGACCCTGACATTTTACAAGGATGGTAAAGCTCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000049926.15 ENSMUST00000166297.7 ENSMUST00000178261.3 ENSMUST00000193229.6 ENSMUST00000194102.6 |
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| CDS GCA 72 bp | AGGGTTCCTGGAGTCATCAGAGGTAGGCTTTCCTCCTaGTTTTCTAGAGAACCAGCAATAAAACAGAAACAC | + |
|
Preference number: 6 (lower is better) Translates to: RVPGVIRGRLSS*FSREPAIKQKH Trigger: GTGTTTCTGTTTTATTGCTGGTTCTCTAGAAAAGCAGGAGGAAAGCCTACCTCTGATGACTCCAGGAACCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000049926.15 ENSMUST00000166297.7 ENSMUST00000178261.3 ENSMUST00000193229.6 ENSMUST00000194102.6 |
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| CDS GCA 72 bp | GTACTTCTGTGTAAATCACGTTTTCCTCAGGCTCATTaGTGTACACTGGCTGCAGTTCTATACAGGCTGGTA | + |
|
Preference number: 6 (lower is better) Translates to: VLLCKSRFPQAH*CTLAAVLYRLV Trigger: TACCAGCCTGTATAGAACTGCAGCCAGTGTACAGCAATGAGCCTGAGGAAAACGTGATTTACACAGAAGTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000049926.15 ENSMUST00000166297.7 ENSMUST00000178261.3 ENSMUST00000193229.6 ENSMUST00000194102.6 |
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| CDS CCA 72 bp | AAGCTGTCGGCTTGGCACCAATACTCTCCGGACTCATaGACCTTTAAGGTATGTGCTTTAATTACCAAAGCA | + |
|
Preference number: 6 (lower is better) Translates to: KLSAWHQYSPDS*TFKVCALITKA Trigger: TGCTTTGGTAATTAAAGCACATACCTTAAAGGTCCATGAGTCCGGAGAGTATTGGTGCCAAGCCGACAGCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049926.15 ENSMUST00000178261.3 ENSMUST00000194102.6 |
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| CDS CCA 72 bp | GTGGGAACAACTCTTGGACTTGAACTACGACCGTATTaGAAGTATAGAGGGACCCAAAAGACCACTTCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: VGTTLGLELRPY*KYRGTQKTTSS Trigger: AGAAGAAGTGGTCTTTTGGGTCCCTCTATACTTCCAATACGGTCGTAGTTCAAGTCCAAGAGTTGTTCCCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000049926.15 ENSMUST00000166297.7 ENSMUST00000178261.3 ENSMUST00000193229.6 ENSMUST00000194102.6 |
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| CDS CCA 72 bp | TCAAACACCAACTTTGAGGCTGGGATGATGTGTGTTTaGAATCTCGCAGAAGCTCTCTGCACTGGAATTATG | + |
|
Preference number: 6 (lower is better) Translates to: SNTNFEAGMMCV*NLAEALCTGIM Trigger: CATAATTCCAGTGCAGAGAGCTTCTGCGAGATTCCAAACACACATCATCCCAGCCTCAAAGTTGGTGTTTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000049926.15 ENSMUST00000166297.7 ENSMUST00000178261.3 ENSMUST00000193229.6 ENSMUST00000194102.6 |
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| CDS TCA 72 bp | GGAATTCACTGTTTCTGCCTTGCACTGGTATCTCTTTaGCTCTTCAGTCCATATGGCAGGAATGTGAAACTC | + |
|
Preference number: 6 (lower is better) Translates to: GIHCFCLALVSL*LFSPYGRNVKL Trigger: GAGTTTCACATTCCTGCCATATGGACTGAAGAGTCAAAGAGATACCAGTGCAAGGCAGAAACAGTGAATTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000049926.15 ENSMUST00000166297.7 ENSMUST00000178261.3 ENSMUST00000193229.6 ENSMUST00000194102.6 |
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| CDS CCA 72 bp | GTAAATCACGTTTTCCTCAGGCTCATTGCTGTACACTaGCTGCAGTTCTATACAGGCTGGTACGTTGTAATA | + |
|
Preference number: 6 (lower is better) Translates to: VNHVFLRLIAVH*LQFYTGWYVVI Trigger: TATTACAACGTACCAGCCTGTATAGAACTGCAGCCAGTGTACAGCAATGAGCCTGAGGAAAACGTGATTTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000049926.15 ENSMUST00000166297.7 ENSMUST00000178261.3 ENSMUST00000193229.6 ENSMUST00000194102.6 |
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| CDS CCA 72 bp | TGGGCTTTCAGACTCCTGATCTGCATGTTTCTGTCTTaGTTGAGTTCTCCGTACTTCTGTGTAAATCACGTT | + |
|
Preference number: 6 (lower is better) Translates to: WAFRLLICMFLS*LSSPYFCVNHV Trigger: AACGTGATTTACACAGAAGTACGGAGAACTCAACCAAGACAGAAACATGCAGATCAGGAGTCTGAAAGCCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000049926.15 ENSMUST00000166297.7 ENSMUST00000178261.3 ENSMUST00000193229.6 ENSMUST00000194102.6 |
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| CDS CAA 72 bp | GGGAATTCACTGTTTCTGCCTTGCACTGGTATCTCTTaGACTCTTCAGTCCATATGGCAGGAATGTGAAACT | + |
|
Preference number: 6 (lower is better) Translates to: GNSLFLPCTGIS*TLQSIWQECET Trigger: AGTTTCACATTCCTGCCATATGGACTGAAGAGTCAAAGAGATACCAGTGCAAGGCAGAAACAGTGAATTCCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000049926.15 ENSMUST00000166297.7 ENSMUST00000178261.3 ENSMUST00000193229.6 ENSMUST00000194102.6 |
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| CDS CAA 72 bp | TTGGGCTTTCAGACTCCTGATCTGCATGTTTCTGTCTaGGTTGAGTTCTCCGTACTTCTGTGTAAATCACGT | + |
|
Preference number: 6 (lower is better) Translates to: LGFQTPDLHVSV*VEFSVLLCKSR Trigger: ACGTGATTTACACAGAAGTACGGAGAACTCAACCAAGACAGAAACATGCAGATCAGGAGTCTGAAAGCCCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000049926.15 ENSMUST00000166297.7 ENSMUST00000178261.3 ENSMUST00000193229.6 ENSMUST00000194102.6 |
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| CDS CAA 90 bp | GAATCTCGCAGAAGCTCTCTGCACTGGAATTATGAACGCTGTACTTaGTTTACTAACTTGGGAATTCACTGTTTCTGCCTTGCACTGGTA | + |
|
Preference number: 6 (lower is better) Translates to: ESRRSSLHWNYERCT*FTNLGIHCFCLALV Trigger: TACCAGTGCAAGGCAGAAACAGTGAATTCCCAAGTTAGTAAACAAAGTACAGCGTTCATAATTCCAGTGCAGAGAGCTTCTGCGAGATTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000049926.15 ENSMUST00000166297.7 ENSMUST00000178261.3 ENSMUST00000193229.6 ENSMUST00000194102.6 |
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| CDS GCA 72 bp | TATAGAGGGACCCAAAAGACCACTTCTTCTTCGAAGTaGATTTGTATTGACCGTTGTCCTTCAGATTTGCAC | + |
|
Preference number: 6 (lower is better) Translates to: YRGTQKTTSSSK*ICIDRCPSDLH Trigger: GTGCAAATCTGAAGGACAACGGTCAATACAAATGCACTTCGAAGAAGAAGTGGTCTTTTGGGTCCCTCTATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000049926.15 ENSMUST00000166297.7 ENSMUST00000178261.3 ENSMUST00000193229.6 ENSMUST00000194102.6 |
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| CDS GCA 72 bp | GGGATGATGTGTGTTTGGAATCTCGCAGAAGCTCTCTaGACTGGAATTATGAACGCTGTACTTTGTTTACTA | + |
|
Preference number: 6 (lower is better) Translates to: GMMCVWNLAEAL*TGIMNAVLCLL Trigger: TAGTAAACAAAGTACAGCGTTCATAATTCCAGTGCAGAGAGCTTCTGCGAGATTCCAAACACACATCATCCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000049926.15 ENSMUST00000166297.7 ENSMUST00000178261.3 ENSMUST00000193229.6 ENSMUST00000194102.6 |
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| CDS CAA 72 bp | GCTTTCAGACTCCTGATCTGCATGTTTCTGTCTTGGTaGAGTTCTCCGTACTTCTGTGTAAATCACGTTTTC | + |
|
Preference number: 6 (lower is better) Translates to: AFRLLICMFLSW*SSPYFCVNHVF Trigger: GAAAACGTGATTTACACAGAAGTACGGAGAACTCAACCAAGACAGAAACATGCAGATCAGGAGTCTGAAAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000049926.15 ENSMUST00000166297.7 ENSMUST00000178261.3 ENSMUST00000193229.6 ENSMUST00000194102.6 |
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| CDS CAA 90 bp | AACGCTGTACTTTGTTTACTAACTTGGGAATTCACTGTTTCTGCCTaGCACTGGTATCTCTTTGACTCTTCAGTCCATATGGCAGGAATG | + |
|
Preference number: 6 (lower is better) Translates to: NAVLCLLTWEFTVSA*HWYLFDSSVHMAGM Trigger: CATTCCTGCCATATGGACTGAAGAGTCAAAGAGATACCAGTGCAAGGCAGAAACAGTGAATTCCCAAGTTAGTAAACAAAGTACAGCGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000049926.15 ENSMUST00000166297.7 ENSMUST00000178261.3 ENSMUST00000193229.6 ENSMUST00000194102.6 |
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| CDS CCA 72 bp | GATGTGTGTTTGGAATCTCGCAGAAGCTCTCTGCACTaGAATTATGAACGCTGTACTTTGTTTACTAACTTG | + |
|
Preference number: 6 (lower is better) Translates to: DVCLESRRSSLH*NYERCTLFTNL Trigger: CAAGTTAGTAAACAAAGTACAGCGTTCATAATTCCAGTGCAGAGAGCTTCTGCGAGATTCCAAACACACATC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000049926.15 ENSMUST00000166297.7 ENSMUST00000178261.3 ENSMUST00000193229.6 ENSMUST00000194102.6 |
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| CDS CCA 72 bp | ACTGGAATTATGAACGCTGTACTTTGTTTACTAACTTaGGAATTCACTGTTTCTGCCTTGCACTGGTATCTC | + |
|
Preference number: 6 (lower is better) Translates to: TGIMNAVLCLLT*EFTVSALHWYL Trigger: GAGATACCAGTGCAAGGCAGAAACAGTGAATTCCCAAGTTAGTAAACAAAGTACAGCGTTCATAATTCCAGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000049926.15 ENSMUST00000166297.7 ENSMUST00000178261.3 ENSMUST00000193229.6 ENSMUST00000194102.6 |
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| CDS CAA 72 bp | CTTTGTTTACTAACTTGGGAATTCACTGTTTCTGCCTaGCACTGGTATCTCTTTGACTCTTCAGTCCATATG | + |
|
Preference number: 6 (lower is better) Translates to: LCLLTWEFTVSA*HWYLFDSSVHM Trigger: CATATGGACTGAAGAGTCAAAGAGATACCAGTGCAAGGCAGAAACAGTGAATTCCCAAGTTAGTAAACAAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000049926.15 ENSMUST00000166297.7 ENSMUST00000178261.3 ENSMUST00000193229.6 ENSMUST00000194102.6 |
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| CDS CAA 72 bp | CACTGGAATTATGAACGCTGTACTTTGTTTACTAACTaGGGAATTCACTGTTTCTGCCTTGCACTGGTATCT | + |
|
Preference number: 6 (lower is better) Translates to: HWNYERCTLFTN*GIHCFCLALVS Trigger: AGATACCAGTGCAAGGCAGAAACAGTGAATTCCCAAGTTAGTAAACAAAGTACAGCGTTCATAATTCCAGTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000049926.15 ENSMUST00000166297.7 ENSMUST00000178261.3 ENSMUST00000193229.6 ENSMUST00000194102.6 |
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| CDS CAA 72 bp | AGAAGCTCTCTGCACTGGAATTATGAACGCTGTACTTaGTTTACTAACTTGGGAATTCACTGTTTCTGCCTT | + |
|
Preference number: 6 (lower is better) Translates to: RSSLHWNYERCT*FTNLGIHCFCL Trigger: AAGGCAGAAACAGTGAATTCCCAAGTTAGTAAACAAAGTACAGCGTTCATAATTCCAGTGCAGAGAGCTTCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000049926.15 ENSMUST00000166297.7 ENSMUST00000178261.3 ENSMUST00000193229.6 ENSMUST00000194102.6 |
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| CDS CAA 72 bp | TCGAAGTGCATTTGTATTGACCGTTGTCCTTCAGATTaGCACGATGAATATAGAACTCAGAACTTTGAGGAT | + |
|
Preference number: 6 (lower is better) Translates to: SKCICIDRCPSD*HDEYRTQNFED Trigger: ATCCTCAAAGTTCTGAGTTCTATATTCATCGTGCAAATCTGAAGGACAACGGTCAATACAAATGCACTTCGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000049926.15 ENSMUST00000166297.7 ENSMUST00000178261.3 ENSMUST00000193229.6 ENSMUST00000194102.6 |
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