Pregenerated sensors for FCRL1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000059994Ensembl transcript IDs: ENSMUST00000072480.9, ENSMUST00000163661.8, ENSMUST00000167200.7, ENSMUST00000191666.2, ENSMUST00000194786.6
Found 129 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TGGGCAACAACCAGATGCAAATGCTTCTGGCTTCTCCGTCTAAGTTaGTTTTCCTGGGTGGTTTCTGCAGGACTTGCTCCAGCTTCACAC | + |
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Preference number: 1 (lower is better) Translates to: WATTRCKCFWLLRLS*FSWVVSAGLAPASH Trigger: GTGTGAAGCTGGAGCAAGTCCTGCAGAAACCACCCAGGAAAACCAACTTAGACGGAGAAGCCAGAAGCATTTGCATCTGGTTGTTGCCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072480.9 ENSMUST00000163661.8 ENSMUST00000167200.7 |
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| 3UTR CCA 90 bp | CAGGGTTCTGATCTTTGCTACTGCCATACGAGTTCTTCTGTCTGGTaGCGCTATCCACTGCCCCACATGGTCATTCTTCTCAGACATCAT | + |
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Preference number: 1 (lower is better) Translates to: QGSDLCYCHTSSSVW*RYPLPHMVILLRHH Trigger: ATGATGTCTGAGAAGAATGACCATGTGGGGCAGTGGATAGCGCCACCAGACAGAAGAACTCGTATGGCAGTAGCAAAGATCAGAACCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194786.6 |
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| 3UTR CCA 90 bp | TATCAGGGTTCTGATCTTTGCTACTGCCATACGAGTTCTTCTGTCTaGTGGCGCTATCCACTGCCCCACATGGTCATTCTTCTCAGACAT | + |
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Preference number: 1 (lower is better) Translates to: YQGSDLCYCHTSSSV*WRYPLPHMVILLRH Trigger: ATGTCTGAGAAGAATGACCATGTGGGGCAGTGGATAGCGCCACCAGACAGAAGAACTCGTATGGCAGTAGCAAAGATCAGAACCCTGATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194786.6 |
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| 3UTR GCA 90 bp | CTCCTACCCACTCTCAGTTATGAGTTTTATCAGGGTTCTGATCTTTaGTACTGCCATACGAGTTCTTCTGTCTGGTGGCGCTATCCACTG | + |
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Preference number: 1 (lower is better) Translates to: LLPTLSYEFYQGSDL*YCHTSSSVWWRYPL Trigger: CAGTGGATAGCGCCACCAGACAGAAGAACTCGTATGGCAGTAGCAAAGATCAGAACCCTGATAAAACTCATAACTGAGAGTGGGTAGGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194786.6 |
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| 3UTR GCA 90 bp | GTGGATGAAGATGCATACAACTTACTCAGGGTGAACCAGAGATTATaGTACGTGACCAACACGGTCCTCTTAGTGGGTGTCATGGACAAG | + |
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Preference number: 1 (lower is better) Translates to: VDEDAYNLLRVNQRL*YVTNTVLLVGVMDK Trigger: CTTGTCCATGACACCCACTAAGAGGACCGTGTTGGTCACGTAGCATAATCTCTGGTTCACCCTGAGTAAGTTGTATGCATCTTCATCCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194786.6 |
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| 3UTR TCA 90 bp | GCATCACCCTTGATGAAGATAGACACTCCTCAGCAATCTGAATGCTaGAAAGAAAGTAGTGGCTGTTCAAGGATGGTTCATGGCTGGCTT | + |
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Preference number: 1 (lower is better) Translates to: ASPLMKIDTPQQSEC*KESSGCSRMVHGWL Trigger: AAGCCAGCCATGAACCATCCTTGAACAGCCACTACTTTCTTTTCAGCATTCAGATTGCTGAGGAGTGTCTATCTTCATCAAGGGTGATGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194786.6 |
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| 3UTR CAA 90 bp | ACAGAGGAAGCATGGCTCTGTCTCCACAGCAGACCCGCAAAGCCATaGATCTCGGCTTTGTGCTCTCTGAGTCGCATTGTCCCTCTGCTG | + |
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Preference number: 2 (lower is better) Translates to: TEEAWLCLHSRPAKP*ISALCSLSRIVPLL Trigger: CAGCAGAGGGACAATGCGACTCAGAGAGCACAAAGCCGAGATCAATGGCTTTGCGGGTCTGCTGTGGAGACAGAGCCATGCTTCCTCTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072480.9 ENSMUST00000163661.8 ENSMUST00000167200.7 ENSMUST00000191666.2 |
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| 3UTR-3UTR GCA 90 bp | CTAGGGTATGTGTACAGAGGAAGCATGGCTCTGTCTCCACAGCAGACCCGCAAATGGGCAACAACCAGATaGAAATGCTTCTGGCTTCTC | + |
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Preference number: 2 (lower is better) Translates to: LGYVYRGSMALSPQQTRKWATTR*KCFWLL Trigger: GAGAAGCCAGAAGCATTTGCATCTGGTTGTTGCCCA...TTTGCGGGTCTGCTGTGGAGACAGAGCCATGCTTCCTCTGTACACATACCCTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072480.9 ENSMUST00000163661.8 ENSMUST00000167200.7 ENSMUST00000191666.2 |
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| 3UTR-3UTR CCA 90 bp | TGCCAACATGAATGGGCAACAACCAGATGCAAATGCTTCTGGCTTCTCCGTCTATGTCCCCAGTATCCTTaGAGGCCACATCAGGCCTTG | + |
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Preference number: 2 (lower is better) Translates to: CQHEWATTRCKCFWLLRLCPQYP*RPHQAL Trigger: CAAGGCCTGATGTGGCCTCCAAGGATACTGGGGACA...TAGACGGAGAAGCCAGAAGCATTTGCATCTGGTTGTTGCCCATTCATGTTGGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072480.9 ENSMUST00000163661.8 ENSMUST00000167200.7 |
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| 3UTR-3UTR GCA 90 bp | TCTGTCTGGTGGCGCTATCCACTGCCCCACATGGTCATTCTTCTCAGACATCATCTCAAGAGTCAACTCTaGCCTTTTGAGATCGGCATC | + |
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Preference number: 2 (lower is better) Translates to: SVWWRYPLPHMVILLRHHLKSQL*PFEIGI Trigger: GATGCCGATCTCAAAAGGGCAGAGTTGACTCTTGAG...ATGATGTCTGAGAAGAATGACCATGTGGGGCAGTGGATAGCGCCACCAGACAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000194786.6 |
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| 3UTR-3UTR CCA 90 bp | ACCCGCAAAGCCATTGATCTCGGCTTTGTGCTCTCTGAGTCGCATTGTCCCTCTGTGTGCCAACATGAATaGGCAACAACCAGATGCAAA | + |
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Preference number: 2 (lower is better) Translates to: TRKAIDLGFVLSESHCPSVCQHE*ATTRCK Trigger: TTTGCATCTGGTTGTTGCCCATTCATGTTGGCACAC...AGAGGGACAATGCGACTCAGAGAGCACAAAGCCGAGATCAATGGCTTTGCGGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072480.9 ENSMUST00000163661.8 ENSMUST00000167200.7 ENSMUST00000191666.2 |
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| 3UTR-3UTR GCA 90 bp | AATAACATTTGGTGGCACACCAACTGTAAACCCAGTTCTTGGAAGACTGAAGCAGGTTTCTGCAGGACTTaGTCCAGCTTCACACAGGGT | + |
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Preference number: 2 (lower is better) Translates to: NNIWWHTNCKPSSWKTEAGFCRT*SSFTQG Trigger: ACCCTGTGTGAAGCTGGAGCAAGTCCTGCAGAAACC...TGCTTCAGTCTTCCAAGAACTGGGTTTACAGTTGGTGTGCCACCAAATGTTATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072480.9 ENSMUST00000167200.7 |
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| 3UTR-3UTR CCA 90 bp | AATAACATTTGGTGGCACACCAACTGTAAACCCAGTTCTTGGAAGACTGAAGCAGTTGGTTTTCCTGGGTaGTTTCTGCAGGACTTGCTC | + |
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Preference number: 2 (lower is better) Translates to: NNIWWHTNCKPSSWKTEAVGFPG*FLQDLL Trigger: GAGCAAGTCCTGCAGAAACCACCCAGGAAAACCAAC...TGCTTCAGTCTTCCAAGAACTGGGTTTACAGTTGGTGTGCCACCAAATGTTATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072480.9 ENSMUST00000167200.7 |
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| 3UTR CAA 90 bp | AAGAGTAAGAGGATTTTCACCTTCTCAAGAGTCAACTCTGCCCTTTaGAGATCGGCATCACCCTTGATGAAGATAGACACTCCTCAGCAA | + |
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Preference number: 2 (lower is better) Translates to: KSKRIFTFSRVNSAL*RSASPLMKIDTPQQ Trigger: TTGCTGAGGAGTGTCTATCTTCATCAAGGGTGATGCCGATCTCAAAAGGGCAGAGTTGACTCTTGAGAAGGTGAAAATCCTCTTACTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194786.6 |
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| 3UTR-3UTR GCA 90 bp | TTTAATTCTAAGTTGATGACAGTGACTCAGAAGTACTCTAGGGTATGTGTACAGACAACCAGATGCAAATaGTTCTGGCTTCTCCGTCTA | + |
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Preference number: 2 (lower is better) Translates to: FNSKLMTVTQKYSRVCVQTTRCK*FWLLRL Trigger: TAGACGGAGAAGCCAGAAGCATTTGCATCTGGTTGT...CTGTACACATACCCTAGAGTACTTCTGAGTCACTGTCATCAACTTAGAATTAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072480.9 ENSMUST00000163661.8 ENSMUST00000167200.7 |
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| 3UTR-3UTR GCA 90 bp | TTATTCATGGTGGATGAAGATGCATACAACTTACTCAGGGTGAACCAGAGATTATACCACATGTTTGACTaGAACCCAAAGCATCTTTTA | + |
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Preference number: 2 (lower is better) Translates to: LFMVDEDAYNLLRVNQRLYHMFD*NPKHLL Trigger: TAAAAGATGCTTTGGGTTGCAGTCAAACATGTGGTA...TAATCTCTGGTTCACCCTGAGTAAGTTGTATGCATCTTCATCCACCATGAATAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194786.6 |
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| 3UTR CCA 72 bp | ATTGGGCTGGCAAGCTATCCCTGTCCCCAGTATCCTTaGAGGCCACATCAGGCCTTGGGCTTGTATGTAGCA | + |
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Preference number: 3 (lower is better) Translates to: IGLASYPCPQYP*RPHQALGLYVA Trigger: TGCTACATACAAGCCCAAGGCCTGATGTGGCCTCCAAGGATACTGGGGACAGGGATAGCTTGCCAGCCCAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072480.9 ENSMUST00000163661.8 ENSMUST00000167200.7 |
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| 3UTR CCA 72 bp | CCATCTAATGAACCGCAGTGTGTGGGGAAATTGGGCTaGCAAGCTATCCCTGTCCCCAGTATCCTTGGAGGC | + |
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Preference number: 3 (lower is better) Translates to: PSNEPQCVGKLG*QAIPVPSILGG Trigger: GCCTCCAAGGATACTGGGGACAGGGATAGCTTGCCAGCCCAATTTCCCCACACACTGCGGTTCATTAGATGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000072480.9 ENSMUST00000163661.8 ENSMUST00000167200.7 |
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| 3UTR CCA 72 bp | AGGACCCATCTAATGAACCGCAGTGTGTGGGGAAATTaGGCTGGCAAGCTATCCCTGTCCCCAGTATCCTTG | + |
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Preference number: 3 (lower is better) Translates to: RTHLMNRSVWGN*AGKLSLSPVSL Trigger: CAAGGATACTGGGGACAGGGATAGCTTGCCAGCCCAATTTCCCCACACACTGCGGTTCATTAGATGGGTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000072480.9 ENSMUST00000163661.8 ENSMUST00000167200.7 |
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| 3UTR CCA 72 bp | AAATGCTTCTGGCTTCTCCGTCTAAGTTGGTTTTCCTaGGTGGTTTCTGCAGGACTTGCTCCAGCTTCACAC | + |
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Preference number: 3 (lower is better) Translates to: KCFWLLRLSWFS*VVSAGLAPASH Trigger: GTGTGAAGCTGGAGCAAGTCCTGCAGAAACCACCCAGGAAAACCAACTTAGACGGAGAAGCCAGAAGCATTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072480.9 ENSMUST00000163661.8 ENSMUST00000167200.7 |
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| 3UTR CCA 72 bp | CTGAATGCTGAAAAGAAAGTAGTGGCTGTTCAAGGATaGTTCATGGCTGGCTTCTCTGTAGCTACCATGGCT | + |
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Preference number: 3 (lower is better) Translates to: LNAEKKVVAVQG*FMAGFSVATMA Trigger: AGCCATGGTAGCTACAGAGAAGCCAGCCATGAACCATCCTTGAACAGCCACTACTTTCTTTTCAGCATTCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194786.6 |
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| 3UTR GCA 72 bp | AAGTTCGTGTGCCAACATGAATGGGCAACAACCAGATaGAAATGCTTCTGGCTTCTCCGTCTAAGTTGGTTT | + |
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Preference number: 3 (lower is better) Translates to: KFVCQHEWATTR*KCFWLLRLSWF Trigger: AAACCAACTTAGACGGAGAAGCCAGAAGCATTTGCATCTGGTTGTTGCCCATTCATGTTGGCACACGAACTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072480.9 ENSMUST00000163661.8 ENSMUST00000167200.7 |
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| CDS-3UTR TCA 90 bp | ATTGGGCTGGCAAGCTATCCCTGTCCCCAGTATCCTTGGAGGCCACATCAGGCCCAAGCAGCCACCCAGTaGGTCCTAAGGAGAGATGGC | + |
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Preference number: 4 (lower is better) Translates to: IGLASYPCPQYPWRPHQAQAATQ*VLRRDG Trigger: GCCATCTCTCCTTAGGACTCACTGGGTGGCTGCTTG...GGCCTGATGTGGCCTCCAAGGATACTGGGGACAGGGATAGCTTGCCAGCCCAAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072480.9 ENSMUST00000163661.8 |
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| CDS-3UTR CCA 90 bp | GGGGAAATTGGGCTGGCAAGCTATCCCTGTCCCCAGTATCCTTGGAGGCCACATATGCTGAGCTGCTGCTaGTTCCAGCACCTGCGGGGT | + |
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Preference number: 4 (lower is better) Translates to: GEIGLASYPCPQYPWRPHMLSCC*FQHLRG Trigger: ACCCCGCAGGTGCTGGAACCAGCAGCAGCTCAGCAT...ATGTGGCCTCCAAGGATACTGGGGACAGGGATAGCTTGCCAGCCCAATTTCCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000072480.9 ENSMUST00000163661.8 ENSMUST00000167200.7 |
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| CDS-3UTR CCA 90 bp | GTGTGGGGAAATTGGGCTGGCAAGCTATCCCTGTCCCCAGTATCCTTGGAGGCCGACAGGGCGAGACACTaGAACTCTGACGTGGATGCT | + |
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Preference number: 4 (lower is better) Translates to: VWGNWAGKLSLSPVSLEADRARH*NSDVDA Trigger: AGCATCCACGTCAGAGTTCCAGTGTCTCGCCCTGTC...GGCCTCCAAGGATACTGGGGACAGGGATAGCTTGCCAGCCCAATTTCCCCACAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000072480.9 ENSMUST00000163661.8 ENSMUST00000167200.7 |
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| CDS-3UTR CCA 90 bp | ATTGGGCTGGCAAGCTATCCCTGTCCCCAGTATCCTTGGAGGCCACATCAGGCCACCACCTCACTTCGTTaGGCACCCTGTCCATTGCTG | + |
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Preference number: 4 (lower is better) Translates to: IGLASYPCPQYPWRPHQATTSLR*APCPLL Trigger: CAGCAATGGACAGGGTGCCCAACGAAGTGAGGTGGT...GGCCTGATGTGGCCTCCAAGGATACTGGGGACAGGGATAGCTTGCCAGCCCAAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072480.9 ENSMUST00000163661.8 ENSMUST00000167200.7 |
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| CDS-3UTR CCA 90 bp | GCAAGCTATCCCTGTCCCCAGTATCCTTGGAGGCCACATCAGGCCTTGGGCTTGGGGGTTTGGGGTAGGTaGATCCTTGGAGCACAGTCT | + |
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Preference number: 4 (lower is better) Translates to: ASYPCPQYPWRPHQALGLGVWGR*ILGAQS Trigger: AGACTGTGCTCCAAGGATCCACCTACCCCAAACCCC...CAAGCCCAAGGCCTGATGTGGCCTCCAAGGATACTGGGGACAGGGATAGCTTGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000072480.9 ENSMUST00000163661.8 ENSMUST00000167200.7 |
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| CDS-3UTR TCA 90 bp | TGTGTGGGGAAATTGGGCTGGCAAGCTATCCCTGTCCCCAGTATCCTTGGAGGCGTAGAAGATTGGGGGTaGGCCTCTCAGGGCCTTACA | + |
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Preference number: 4 (lower is better) Translates to: CVGKLGWQAIPVPSILGGVEDWG*ASQGLT Trigger: TGTAAGGCCCTGAGAGGCTCACCCCCAATCTTCTAC...GCCTCCAAGGATACTGGGGACAGGGATAGCTTGCCAGCCCAATTTCCCCACACA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000072480.9 ENSMUST00000163661.8 ENSMUST00000167200.7 |
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| CDS-3UTR TCA 90 bp | GGAAGCATGGCTCTGTCTCCACAGCAGACCCGCAAAGCCATTGATCTCGGCTTTCAAGCAGCCACCCAGTaGGTCCTAAGGAGAGATGGC | + |
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Preference number: 4 (lower is better) Translates to: GSMALSPQQTRKAIDLGFQAATQ*VLRRDG Trigger: GCCATCTCTCCTTAGGACTCACTGGGTGGCTGCTTG...AAAGCCGAGATCAATGGCTTTGCGGGTCTGCTGTGGAGACAGAGCCATGCTTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072480.9 ENSMUST00000163661.8 |
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| CDS-3UTR GCA 90 bp | ACCCGCAAAGCCATTGATCTCGGCTTTGTGCTCTCTGAGTCGCATTGTCCCTCTCACATGCTGAGCTGCTaGTGGTTCCAGCACCTGCGG | + |
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Preference number: 4 (lower is better) Translates to: TRKAIDLGFVLSESHCPSHMLSC*WFQHLR Trigger: CCGCAGGTGCTGGAACCAGCAGCAGCTCAGCATGTG...AGAGGGACAATGCGACTCAGAGAGCACAAAGCCGAGATCAATGGCTTTGCGGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072480.9 ENSMUST00000163661.8 ENSMUST00000167200.7 |
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| CDS-3UTR CCA 90 bp | AGCATGGCTCTGTCTCCACAGCAGACCCGCAAAGCCATTGATCTCGGCTTTGTGTCCCCTAGCACAGCCTaGGTTCCAGAGTCCCCAAAC | + |
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Preference number: 4 (lower is better) Translates to: SMALSPQQTRKAIDLGFVSPSTA*VPESPN Trigger: GTTTGGGGACTCTGGAACCCAGGCTGTGCTAGGGGA...CACAAAGCCGAGATCAATGGCTTTGCGGGTCTGCTGTGGAGACAGAGCCATGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000072480.9 ENSMUST00000163661.8 ENSMUST00000167200.7 ENSMUST00000191666.2 |
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| CDS-3UTR TCA 90 bp | TGGCTTCTCCGTCTAAGTTGGTTTTCCTGGGTGGTTTCTGCAGGACTTGCTCCACTCAGGGCCTTACAGTaGAGCTCCACCAGGTCCCCT | + |
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Preference number: 4 (lower is better) Translates to: WLLRLSWFSWVVSAGLAPLRALQ*SSTRSP Trigger: AGGGGACCTGGTGGAGCTTCACTGTAAGGCCCTGAG...TGGAGCAAGTCCTGCAGAAACCACCCAGGAAAACCAACTTAGACGGAGAAGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000072480.9 ENSMUST00000163661.8 ENSMUST00000167200.7 |
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| CDS-3UTR GCA 90 bp | TGGCTTCTCCGTCTAAGTTGGTTTTCCTGGGTGGTTTCTGCAGGACTTGCTCCACACATGCTGAGCTGCTaGTGGTTCCAGCACCTGCGG | + |
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Preference number: 4 (lower is better) Translates to: WLLRLSWFSWVVSAGLAPHMLSC*WFQHLR Trigger: CCGCAGGTGCTGGAACCAGCAGCAGCTCAGCATGTG...TGGAGCAAGTCCTGCAGAAACCACCCAGGAAAACCAACTTAGACGGAGAAGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072480.9 ENSMUST00000163661.8 ENSMUST00000167200.7 |
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| CDS-3UTR CCA 90 bp | TGTGTGGGGAAATTGGGCTGGCAAGCTATCCCTGTCCCCAGTATCCTTGGAGGCGTCTTTGTTTCCAGTTaGAAACCCAGGGCCCCTCTG | + |
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Preference number: 4 (lower is better) Translates to: CVGKLGWQAIPVPSILGGVFVSS*KPRAPL Trigger: CAGAGGGGCCCTGGGTTTCCAACTGGAAACAAAGAC...GCCTCCAAGGATACTGGGGACAGGGATAGCTTGCCAGCCCAATTTCCCCACACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000072480.9 ENSMUST00000163661.8 ENSMUST00000167200.7 |
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| CDS-3UTR CCA 90 bp | AGCATGGCTCTGTCTCCACAGCAGACCCGCAAAGCCATTGATCTCGGCTTTGTGGACAGGGCGAGACACTaGAACTCTGACGTGGATGCT | + |
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Preference number: 4 (lower is better) Translates to: SMALSPQQTRKAIDLGFVDRARH*NSDVDA Trigger: AGCATCCACGTCAGAGTTCCAGTGTCTCGCCCTGTC...CACAAAGCCGAGATCAATGGCTTTGCGGGTCTGCTGTGGAGACAGAGCCATGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072480.9 ENSMUST00000163661.8 ENSMUST00000167200.7 ENSMUST00000191666.2 |
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| CDS-3UTR CCA 90 bp | CTAGGGTATGTGTACAGAGGAAGCATGGCTCTGTCTCCACAGCAGACCCGCAAATCCCCTAGCACAGCCTaGGTTCCAGAGTCCCCAAAC | + |
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Preference number: 4 (lower is better) Translates to: LGYVYRGSMALSPQQTRKSPSTA*VPESPN Trigger: GTTTGGGGACTCTGGAACCCAGGCTGTGCTAGGGGA...TTTGCGGGTCTGCTGTGGAGACAGAGCCATGCTTCCTCTGTACACATACCCTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000072480.9 ENSMUST00000163661.8 ENSMUST00000167200.7 ENSMUST00000191666.2 |
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| CDS-3UTR CCA 90 bp | GGAAGCATGGCTCTGTCTCCACAGCAGACCCGCAAAGCCATTGATCTCGGCTTTACCACCTCACTTCGTTaGGCACCCTGTCCATTGCTG | + |
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Preference number: 4 (lower is better) Translates to: GSMALSPQQTRKAIDLGFTTSLR*APCPLL Trigger: CAGCAATGGACAGGGTGCCCAACGAAGTGAGGTGGT...AAAGCCGAGATCAATGGCTTTGCGGGTCTGCTGTGGAGACAGAGCCATGCTTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072480.9 ENSMUST00000163661.8 ENSMUST00000167200.7 ENSMUST00000191666.2 |
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| 3UTR CAA 72 bp | AATTGGGCTGGCAAGCTATCCCTGTCCCCAGTATCCTaGGAGGCCACATCAGGCCTTGGGCTTGTATGTAGC | + |
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Preference number: 4 (lower is better) Translates to: NWAGKLSLSPVS*EATSGLGLVCS Trigger: GCTACATACAAGCCCAAGGCCTGATGTGGCCTCCAAGGATACTGGGGACAGGGATAGCTTGCCAGCCCAATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072480.9 ENSMUST00000163661.8 ENSMUST00000167200.7 |
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| 3UTR CAA 72 bp | GCATGGCTCTGTCTCCACAGCAGACCCGCAAAGCCATaGATCTCGGCTTTGTGCTCTCTGAGTCGCATTGTC | + |
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Preference number: 4 (lower is better) Translates to: AWLCLHSRPAKP*ISALCSLSRIV Trigger: GACAATGCGACTCAGAGAGCACAAAGCCGAGATCAATGGCTTTGCGGGTCTGCTGTGGAGACAGAGCCATGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072480.9 ENSMUST00000163661.8 ENSMUST00000167200.7 ENSMUST00000191666.2 |
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| CDS-3UTR TCA 90 bp | GCAAAGCCATTGATCTCGGCTTTGTGCTCTCTGAGTCGCATTGTCCCTCTGCTGGTAGAAGATTGGGGGTaGGCCTCTCAGGGCCTTACA | + |
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Preference number: 4 (lower is better) Translates to: AKPLISALCSLSRIVPLLVEDWG*ASQGLT Trigger: TGTAAGGCCCTGAGAGGCTCACCCCCAATCTTCTAC...CAGCAGAGGGACAATGCGACTCAGAGAGCACAAAGCCGAGATCAATGGCTTTGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000072480.9 ENSMUST00000163661.8 ENSMUST00000167200.7 ENSMUST00000191666.2 |
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| CDS-3UTR TCA 90 bp | AGTAGTGGCTGTTCAAGGATGGTTCATGGCTGGCTTCTCTGTAGCTACCATGGCCAAGCAGCCACCCAGTaGGTCCTAAGGAGAGATGGC | + |
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Preference number: 4 (lower is better) Translates to: SSGCSRMVHGWLLCSYHGQAATQ*VLRRDG Trigger: GCCATCTCTCCTTAGGACTCACTGGGTGGCTGCTTG...GCCATGGTAGCTACAGAGAAGCCAGCCATGAACCATCCTTGAACAGCCACTACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194786.6 |
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| CDS-3UTR CCA 90 bp | TTTTCCTGGGTGGTTTCTGCAGGACTTGCTCCAGCTTCACACAGGGTAGGTGAATCCCCTAGCACAGCCTaGGTTCCAGAGTCCCCAAAC | + |
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Preference number: 4 (lower is better) Translates to: FSWVVSAGLAPASHRVGESPSTA*VPESPN Trigger: GTTTGGGGACTCTGGAACCCAGGCTGTGCTAGGGGA...TTCACCTACCCTGTGTGAAGCTGGAGCAAGTCCTGCAGAAACCACCCAGGAAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000072480.9 ENSMUST00000163661.8 ENSMUST00000167200.7 |
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| CDS-3UTR CCA 90 bp | GCAAAGCCATTGATCTCGGCTTTGTGCTCTCTGAGTCGCATTGTCCCTCTGCTGACCACCTCACTTCGTTaGGCACCCTGTCCATTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: AKPLISALCSLSRIVPLLTTSLR*APCPLL Trigger: CAGCAATGGACAGGGTGCCCAACGAAGTGAGGTGGT...CAGCAGAGGGACAATGCGACTCAGAGAGCACAAAGCCGAGATCAATGGCTTTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072480.9 ENSMUST00000163661.8 ENSMUST00000167200.7 ENSMUST00000191666.2 |
||
| CDS-3UTR TCA 90 bp | TCTAGGGTATGTGTACAGAGGAAGCATGGCTCTGTCTCCACAGCAGACCCGCAAAGTCCAGAGGAGACCTaGAAGGACTCACTTACTCCG | + |
|
Preference number: 4 (lower is better) Translates to: SRVCVQRKHGSVSTADPQSPEET*KDSLTP Trigger: CGGAGTAAGTGAGTCCTTTCAGGTCTCCTCTGGACT...TTGCGGGTCTGCTGTGGAGACAGAGCCATGCTTCCTCTGTACACATACCCTAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072480.9 ENSMUST00000163661.8 ENSMUST00000167200.7 |
||
| CDS-3UTR TCA 90 bp | ACCCGCAAAGCCATTGATCTCGGCTTTGTGCTCTCTGAGTCGCATTGTCCCTCTAGTCCAGAGGAGACCTaGAAGGACTCACTTACTCCG | + |
|
Preference number: 4 (lower is better) Translates to: TRKAIDLGFVLSESHCPSSPEET*KDSLTP Trigger: CGGAGTAAGTGAGTCCTTTCAGGTCTCCTCTGGACT...AGAGGGACAATGCGACTCAGAGAGCACAAAGCCGAGATCAATGGCTTTGCGGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072480.9 ENSMUST00000163661.8 ENSMUST00000167200.7 |
||
| 3UTR CAA 72 bp | AAGGACCCATCTAATGAACCGCAGTGTGTGGGGAAATaGGGCTGGCAAGCTATCCCTGTCCCCAGTATCCTT | + |
|
Preference number: 4 (lower is better) Translates to: KDPSNEPQCVGK*GWQAIPVPSIL Trigger: AAGGATACTGGGGACAGGGATAGCTTGCCAGCCCAATTTCCCCACACACTGCGGTTCATTAGATGGGTCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000072480.9 ENSMUST00000163661.8 ENSMUST00000167200.7 |
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| CDS-3UTR TCA 90 bp | AAAGAAAGTAGTGGCTGTTCAAGGATGGTTCATGGCTGGCTTCTCTGTAGCTACCTCAGGGCCTTACAGTaGAGCTCCACCAGGTCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: KESSGCSRMVHGWLLCSYLRALQ*SSTRSP Trigger: AGGGGACCTGGTGGAGCTTCACTGTAAGGCCCTGAG...GTAGCTACAGAGAAGCCAGCCATGAACCATCCTTGAACAGCCACTACTTTCTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194786.6 |
||
| CDS-3UTR TCA 90 bp | GCTGTTCAAGGATGGTTCATGGCTGGCTTCTCTGTAGCTACCATGGCTCTTGATGTAGAAGATTGGGGGTaGGCCTCTCAGGGCCTTACA | + |
|
Preference number: 4 (lower is better) Translates to: AVQGWFMAGFSVATMALDVEDWG*ASQGLT Trigger: TGTAAGGCCCTGAGAGGCTCACCCCCAATCTTCTAC...ATCAAGAGCCATGGTAGCTACAGAGAAGCCAGCCATGAACCATCCTTGAACAGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000194786.6 |
||
| CDS-3UTR CCA 90 bp | TGGCTTCTCCGTCTAAGTTGGTTTTCCTGGGTGGTTTCTGCAGGACTTGCTCCAGTCTTTGTTTCCAGTTaGAAACCCAGGGCCCCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: WLLRLSWFSWVVSAGLAPVFVSS*KPRAPL Trigger: CAGAGGGGCCCTGGGTTTCCAACTGGAAACAAAGAC...TGGAGCAAGTCCTGCAGAAACCACCCAGGAAAACCAACTTAGACGGAGAAGCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000072480.9 ENSMUST00000163661.8 ENSMUST00000167200.7 |
||
| CDS-3UTR CCA 90 bp | GCAAGCTATCCCTGTCCCCAGTATCCTTGGAGGCCACATCAGGCCTTGGGCTTGAGTCCTAAGGAGAGATaGCTGATTCCATTCTCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: ASYPCPQYPWRPHQALGLSPKER*LIPFSV Trigger: TACTGAGAATGGAATCAGCCATCTCTCCTTAGGACT...CAAGCCCAAGGCCTGATGTGGCCTCCAAGGATACTGGGGACAGGGATAGCTTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072480.9 ENSMUST00000163661.8 |
||
| CDS-3UTR CCA 90 bp | CCTAGCCTGCATACAACAAAACACAGTGCCACTAAAATGAAGTGTCGCCACAGTATGCTGAGCTGCTGCTaGTTCCAGCACCTGCGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: PSLHTTKHSATKMKCRHSMLSCC*FQHLRG Trigger: ACCCCGCAGGTGCTGGAACCAGCAGCAGCTCAGCAT...ACTGTGGCGACACTTCATTTTAGTGGCACTGTGTTTTGTTGTATGCAGGCTAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000072480.9 ENSMUST00000167200.7 |
||
| CDS-3UTR TCA 90 bp | TTGTCCCTCTGCTGTAAGACCTTAGTTGCTTTCATCACACCATTTTCCTCCTGTCTCAGGGCCTTACAGTaGAGCTCCACCAGGTCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: LSLCCKTLVAFITPFSSCLRALQ*SSTRSP Trigger: AGGGGACCTGGTGGAGCTTCACTGTAAGGCCCTGAG...ACAGGAGGAAAATGGTGTGATGAAAGCAACTAAGGTCTTACAGCAGAGGGACAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000072480.9 ENSMUST00000163661.8 ENSMUST00000167200.7 ENSMUST00000191666.2 |
||
| CDS-3UTR TCA 90 bp | CCTCCTGTAAATAAAAGTTCGTGTGCCAACATGAATGGGCAACAACCAGATGCACTCAGGGCCTTACAGTaGAGCTCCACCAGGTCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: PPVNKSSCANMNGQQPDALRALQ*SSTRSP Trigger: AGGGGACCTGGTGGAGCTTCACTGTAAGGCCCTGAG...TGCATCTGGTTGTTGCCCATTCATGTTGGCACACGAACTTTTATTTACAGGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000072480.9 ENSMUST00000163661.8 ENSMUST00000167200.7 ENSMUST00000191666.2 |
||
| CDS-3UTR TCA 90 bp | TGGGGAAATTGGGCTGGCAAGCTATCCCTGTCCCCAGTATCCTTGGAGGCCACACCTGACTGGATCCTCTaGTTGTCTTCCTATTTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: WGNWAGKLSLSPVSLEATPDWIL*LSSYFS Trigger: AGAAAAATAGGAAGACAATCAGAGGATCCAGTCAGG...TGTGGCCTCCAAGGATACTGGGGACAGGGATAGCTTGCCAGCCCAATTTCCCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000072480.9 ENSMUST00000163661.8 |
||
| CDS-3UTR CCA 90 bp | GCTGTTCAAGGATGGTTCATGGCTGGCTTCTCTGTAGCTACCATGGCTCTTGATGTCTTTGTTTCCAGTTaGAAACCCAGGGCCCCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: AVQGWFMAGFSVATMALDVFVSS*KPRAPL Trigger: CAGAGGGGCCCTGGGTTTCCAACTGGAAACAAAGAC...ATCAAGAGCCATGGTAGCTACAGAGAAGCCAGCCATGAACCATCCTTGAACAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194786.6 |
||
| CDS-3UTR TCA 90 bp | AATAACATTTGGTGGCACACCAACTGTAAACCCAGTTCTTGGAAGACTGAAGCACTCAGGGCCTTACAGTaGAGCTCCACCAGGTCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: NNIWWHTNCKPSSWKTEALRALQ*SSTRSP Trigger: AGGGGACCTGGTGGAGCTTCACTGTAAGGCCCTGAG...TGCTTCAGTCTTCCAAGAACTGGGTTTACAGTTGGTGTGCCACCAAATGTTATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072480.9 ENSMUST00000167200.7 |
||
| CDS-3UTR TCA 90 bp | TGCCAACATGAATGGGCAACAACCAGATGCAAATGCTTCTGGCTTCTCCGTCTAAGTCCAGAGGAGACCTaGAAGGACTCACTTACTCCG | + |
|
Preference number: 4 (lower is better) Translates to: CQHEWATTRCKCFWLLRLSPEET*KDSLTP Trigger: CGGAGTAAGTGAGTCCTTTCAGGTCTCCTCTGGACT...TAGACGGAGAAGCCAGAAGCATTTGCATCTGGTTGTTGCCCATTCATGTTGGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072480.9 ENSMUST00000163661.8 ENSMUST00000167200.7 |
||
| CDS-3UTR CCA 90 bp | CCTAGCCTGCATACAACAAAACACAGTGCCACTAAAATGAAGTGTCGCCACAGTACCACCTCACTTCGTTaGGCACCCTGTCCATTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: PSLHTTKHSATKMKCRHSTTSLR*APCPLL Trigger: CAGCAATGGACAGGGTGCCCAACGAAGTGAGGTGGT...ACTGTGGCGACACTTCATTTTAGTGGCACTGTGTTTTGTTGTATGCAGGCTAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072480.9 ENSMUST00000167200.7 |
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| CDS-3UTR CCA 90 bp | GCTGAAAAGAAAGTAGTGGCTGTTCAAGGATGGTTCATGGCTGGCTTCTCTGTAGGGGTTTGGGGTAGGTaGATCCTTGGAGCACAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: AEKKVVAVQGWFMAGFSVGVWGR*ILGAQS Trigger: AGACTGTGCTCCAAGGATCCACCTACCCCAAACCCC...TACAGAGAAGCCAGCCATGAACCATCCTTGAACAGCCACTACTTTCTTTTCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000194786.6 |
||
| CDS-3UTR CCA 90 bp | GCTTTATTCATGGTGGATGAAGATGCATACAACTTACTCAGGGTGAACCAGAGAATGCTGAGCTGCTGCTaGTTCCAGCACCTGCGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: ALFMVDEDAYNLLRVNQRMLSCC*FQHLRG Trigger: ACCCCGCAGGTGCTGGAACCAGCAGCAGCTCAGCAT...TCTCTGGTTCACCCTGAGTAAGTTGTATGCATCTTCATCCACCATGAATAAAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194786.6 |
||
| 3UTR CAA 72 bp | AACCAGATGCAAATGCTTCTGGCTTCTCCGTCTAAGTaGGTTTTCCTGGGTGGTTTCTGCAGGACTTGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: NQMQMLLASPSK*VFLGGFCRTCS Trigger: GGAGCAAGTCCTGCAGAAACCACCCAGGAAAACCAACTTAGACGGAGAAGCCAGAAGCATTTGCATCTGGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072480.9 ENSMUST00000163661.8 ENSMUST00000167200.7 |
||
| CDS-3UTR TCA 90 bp | GCAAAGCCATTGATCTCGGCTTTGTGCTCTCTGAGTCGCATTGTCCCTCTGCTGAAGTTATATTCCCAGTaGCTCTATCAACCGAGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: AKPLISALCSLSRIVPLLKLYSQ*LYQPSR Trigger: TCTGCTCGGTTGATAGAGTCACTGGGAATATAACTT...CAGCAGAGGGACAATGCGACTCAGAGAGCACAAAGCCGAGATCAATGGCTTTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072480.9 ENSMUST00000163661.8 ENSMUST00000167200.7 ENSMUST00000191666.2 |
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| CDS-3UTR GCA 90 bp | AATTCTAAGTTGATGACAGTGACTCAGAAGTACTCTAGGGTATGTGTACAGAGGCACATGCTGAGCTGCTaGTGGTTCCAGCACCTGCGG | + |
|
Preference number: 4 (lower is better) Translates to: NSKLMTVTQKYSRVCVQRHMLSC*WFQHLR Trigger: CCGCAGGTGCTGGAACCAGCAGCAGCTCAGCATGTG...CCTCTGTACACATACCCTAGAGTACTTCTGAGTCACTGTCATCAACTTAGAATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072480.9 ENSMUST00000163661.8 ENSMUST00000167200.7 |
||
| CDS-3UTR CCA 90 bp | CTAGGGTATGTGTACAGAGGAAGCATGGCTCTGTCTCCACAGCAGACCCGCAAAAGTCCTAAGGAGAGATaGCTGATTCCATTCTCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: LGYVYRGSMALSPQQTRKSPKER*LIPFSV Trigger: TACTGAGAATGGAATCAGCCATCTCTCCTTAGGACT...TTTGCGGGTCTGCTGTGGAGACAGAGCCATGCTTCCTCTGTACACATACCCTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072480.9 ENSMUST00000163661.8 |
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| 3UTR CAA 72 bp | CCCCAGTATCCTTGGAGGCCACATCAGGCCTTGGGCTaGTATGTAGCACTCCATAGTTGCTGTTTACATAAT | + |
|
Preference number: 4 (lower is better) Translates to: PQYPWRPHQALG*YVALHSCCLHN Trigger: ATTATGTAAACAGCAACTATGGAGTGCTACATACAAGCCCAAGGCCTGATGTGGCCTCCAAGGATACTGGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072480.9 ENSMUST00000163661.8 ENSMUST00000167200.7 |
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| CDS-3UTR GCA 90 bp | TTGCTTGTCCAAACTGCTTTATTCATGGTGGATGAAGATGCATACAACTTACTCCACATGCTGAGCTGCTaGTGGTTCCAGCACCTGCGG | + |
|
Preference number: 4 (lower is better) Translates to: LLVQTALFMVDEDAYNLLHMLSC*WFQHLR Trigger: CCGCAGGTGCTGGAACCAGCAGCAGCTCAGCATGTG...GAGTAAGTTGTATGCATCTTCATCCACCATGAATAAAGCAGTTTGGACAAGCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194786.6 |
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| CDS-3UTR CCA 90 bp | GCTTTATTCATGGTGGATGAAGATGCATACAACTTACTCAGGGTGAACCAGAGAACCACCTCACTTCGTTaGGCACCCTGTCCATTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: ALFMVDEDAYNLLRVNQRTTSLR*APCPLL Trigger: CAGCAATGGACAGGGTGCCCAACGAAGTGAGGTGGT...TCTCTGGTTCACCCTGAGTAAGTTGTATGCATCTTCATCCACCATGAATAAAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194786.6 |
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| CDS-3UTR CCA 90 bp | TTGCTTTCATCACACCATTTTCCTCCTGTAAATAAAAGTTCGTGTGCCAACATGATGCTGAGCTGCTGCTaGTTCCAGCACCTGCGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: LLSSHHFPPVNKSSCANMMLSCC*FQHLRG Trigger: ACCCCGCAGGTGCTGGAACCAGCAGCAGCTCAGCAT...CATGTTGGCACACGAACTTTTATTTACAGGAGGAAAATGGTGTGATGAAAGCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000072480.9 ENSMUST00000163661.8 ENSMUST00000167200.7 |
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| CDS-3UTR CCA 90 bp | TTCATGGTGGATGAAGATGCATACAACTTACTCAGGGTGAACCAGAGATTATGCCAGGCTATCCCTCCCTaGACCTCACTTACTCCGTGT | + |
|
Preference number: 4 (lower is better) Translates to: FMVDEDAYNLLRVNQRLCQAIPP*TSLTPC Trigger: ACACGGAGTAAGTGAGGTCCAGGGAGGGATAGCCTG...GCATAATCTCTGGTTCACCCTGAGTAAGTTGTATGCATCTTCATCCACCATGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194786.6 |
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| CDS-3UTR GCA 90 bp | TTGCTTTCATCACACCATTTTCCTCCTGTAAATAAAAGTTCGTGTGCCAACATGCCTCACATGCTGAGCTaGTGCTGGTTCCAGCACCTG | + |
|
Preference number: 4 (lower is better) Translates to: LLSSHHFPPVNKSSCANMPHMLS*CWFQHL Trigger: CAGGTGCTGGAACCAGCAGCAGCTCAGCATGTGAGG...CATGTTGGCACACGAACTTTTATTTACAGGAGGAAAATGGTGTGATGAAAGCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000072480.9 ENSMUST00000163661.8 ENSMUST00000167200.7 |
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| CDS-3UTR CCA 90 bp | TTATTCATGGTGGATGAAGATGCATACAACTTACTCAGGGTGAACCAGAGATTATCCCCTAGCACAGCCTaGGTTCCAGAGTCCCCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: LFMVDEDAYNLLRVNQRLSPSTA*VPESPN Trigger: GTTTGGGGACTCTGGAACCCAGGCTGTGCTAGGGGA...TAATCTCTGGTTCACCCTGAGTAAGTTGTATGCATCTTCATCCACCATGAATAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000194786.6 |
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| CDS-3UTR CCA 90 bp | TCACACCATTTTCCTCCTGTAAATAAAAGTTCGTGTGCCAACATGAATGGGCAAGGGGTTTGGGGTAGGTaGATCCTTGGAGCACAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: SHHFPPVNKSSCANMNGQGVWGR*ILGAQS Trigger: AGACTGTGCTCCAAGGATCCACCTACCCCAAACCCC...TTGCCCATTCATGTTGGCACACGAACTTTTATTTACAGGAGGAAAATGGTGTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000072480.9 ENSMUST00000163661.8 ENSMUST00000167200.7 |
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| CDS-3UTR TCA 90 bp | TCAAAGACTATTATAAACCCAAGAGGGTTTAGCCTAGCCTGCATACAACAAAACGTAGAAGATTGGGGGTaGGCCTCTCAGGGCCTTACA | + |
|
Preference number: 4 (lower is better) Translates to: SKTIINPRGFSLACIQQNVEDWG*ASQGLT Trigger: TGTAAGGCCCTGAGAGGCTCACCCCCAATCTTCTAC...GTTTTGTTGTATGCAGGCTAGGCTAAACCCTCTTGGGTTTATAATAGTCTTTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000072480.9 ENSMUST00000167200.7 |
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| CDS-3UTR TCA 90 bp | TTGCTTTCATCACACCATTTTCCTCCTGTAAATAAAAGTTCGTGTGCCAACATGGTAGAAGATTGGGGGTaGGCCTCTCAGGGCCTTACA | + |
|
Preference number: 4 (lower is better) Translates to: LLSSHHFPPVNKSSCANMVEDWG*ASQGLT Trigger: TGTAAGGCCCTGAGAGGCTCACCCCCAATCTTCTAC...CATGTTGGCACACGAACTTTTATTTACAGGAGGAAAATGGTGTGATGAAAGCAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000072480.9 ENSMUST00000163661.8 ENSMUST00000167200.7 ENSMUST00000191666.2 |
||
| CDS-3UTR GCA 90 bp | TCTAGGGTATGTGTACAGAGGAAGCATGGCTCTGTCTCCACAGCAGACCCGCAATTCATAGTCCATATGTaGAATGTTTATCCTTGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: SRVCVQRKHGSVSTADPQFIVHM*NVYPWL Trigger: AAGCCAAGGATAAACATTGCACATATGGACTATGAA...TTGCGGGTCTGCTGTGGAGACAGAGCCATGCTTCCTCTGTACACATACCCTAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072480.9 ENSMUST00000163661.8 ENSMUST00000167200.7 |
||
| CDS-3UTR CCA 90 bp | AATTCTAAGTTGATGACAGTGACTCAGAAGTACTCTAGGGTATGTGTACAGAGGGTCTTTGTTTCCAGTTaGAAACCCAGGGCCCCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: NSKLMTVTQKYSRVCVQRVFVSS*KPRAPL Trigger: CAGAGGGGCCCTGGGTTTCCAACTGGAAACAAAGAC...CCTCTGTACACATACCCTAGAGTACTTCTGAGTCACTGTCATCAACTTAGAATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000072480.9 ENSMUST00000163661.8 ENSMUST00000167200.7 ENSMUST00000191666.2 |
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| CDS-3UTR CCA 90 bp | TTGCTTGTCCAAACTGCTTTATTCATGGTGGATGAAGATGCATACAACTTACTCGACAGGGCGAGACACTaGAACTCTGACGTGGATGCT | + |
|
Preference number: 4 (lower is better) Translates to: LLVQTALFMVDEDAYNLLDRARH*NSDVDA Trigger: AGCATCCACGTCAGAGTTCCAGTGTCTCGCCCTGTC...GAGTAAGTTGTATGCATCTTCATCCACCATGAATAAAGCAGTTTGGACAAGCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194786.6 |
||
| CDS-3UTR GCA 90 bp | TTTTCCTGGGTGGTTTCTGCAGGACTTGCTCCAGCTTCACACAGGGTAGGTGAATTCATAGTCCATATGTaGAATGTTTATCCTTGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: FSWVVSAGLAPASHRVGEFIVHM*NVYPWL Trigger: AAGCCAAGGATAAACATTGCACATATGGACTATGAA...TTCACCTACCCTGTGTGAAGCTGGAGCAAGTCCTGCAGAAACCACCCAGGAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072480.9 ENSMUST00000163661.8 ENSMUST00000167200.7 |
||
| CDS-3UTR TCA 90 bp | TTGTCCCTCTGCTGTAAGACCTTAGTTGCTTTCATCACACCATTTTCCTCCTGTCCTGACTGGATCCTCTaGTTGTCTTCCTATTTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LSLCCKTLVAFITPFSSCPDWIL*LSSYFS Trigger: AGAAAAATAGGAAGACAATCAGAGGATCCAGTCAGG...ACAGGAGGAAAATGGTGTGATGAAAGCAACTAAGGTCTTACAGCAGAGGGACAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000072480.9 ENSMUST00000163661.8 |
||
| CDS-3UTR CCA 90 bp | TTTAATTCTAAGTTGATGACAGTGACTCAGAAGTACTCTAGGGTATGTGTACAGGTCTTTGTTTCCAGTTaGAAACCCAGGGCCCCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: FNSKLMTVTQKYSRVCVQVFVSS*KPRAPL Trigger: CAGAGGGGCCCTGGGTTTCCAACTGGAAACAAAGAC...CTGTACACATACCCTAGAGTACTTCTGAGTCACTGTCATCAACTTAGAATTAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000072480.9 ENSMUST00000163661.8 ENSMUST00000167200.7 ENSMUST00000191666.2 |
||
| CDS-3UTR TCA 90 bp | GTAAATAAAAGTTCGTGTGCCAACATGAATGGGCAACAACCAGATGCAAATGCTAAGTTATATTCCCAGTaGCTCTATCAACCGAGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: VNKSSCANMNGQQPDANAKLYSQ*LYQPSR Trigger: TCTGCTCGGTTGATAGAGTCACTGGGAATATAACTT...AGCATTTGCATCTGGTTGTTGCCCATTCATGTTGGCACACGAACTTTTATTTAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000072480.9 ENSMUST00000163661.8 ENSMUST00000167200.7 ENSMUST00000191666.2 |
||
| CDS-3UTR TCA 90 bp | TTGCTTTCATCACACCATTTTCCTCCTGTAAATAAAAGTTCGTGTGCCAACATGAAGTTATATTCCCAGTaGCTCTATCAACCGAGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: LLSSHHFPPVNKSSCANMKLYSQ*LYQPSR Trigger: TCTGCTCGGTTGATAGAGTCACTGGGAATATAACTT...CATGTTGGCACACGAACTTTTATTTACAGGAGGAAAATGGTGTGATGAAAGCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000072480.9 ENSMUST00000163661.8 ENSMUST00000167200.7 ENSMUST00000191666.2 |
||
| CDS-3UTR TCA 90 bp | TCATTAAACAAGAGTAAGAGGATTTTCACCTTCTCAAGAGTCAACTCTGCCCTTAAGTTATATTCCCAGTaGCTCTATCAACCGAGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: SLNKSKRIFTFSRVNSALKLYSQ*LYQPSR Trigger: TCTGCTCGGTTGATAGAGTCACTGGGAATATAACTT...AAGGGCAGAGTTGACTCTTGAGAAGGTGAAAATCCTCTTACTCTTGTTTAATGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194786.6 |
||
| CDS-3UTR TCA 90 bp | TTGCTTGTCCAAACTGCTTTATTCATGGTGGATGAAGATGCATACAACTTACTCCCTGACTGGATCCTCTaGTTGTCTTCCTATTTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LLVQTALFMVDEDAYNLLPDWIL*LSSYFS Trigger: AGAAAAATAGGAAGACAATCAGAGGATCCAGTCAGG...GAGTAAGTTGTATGCATCTTCATCCACCATGAATAAAGCAGTTTGGACAAGCAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000194786.6 |
||
| CDS-3UTR CCA 90 bp | TTATTCATGGTGGATGAAGATGCATACAACTTACTCAGGGTGAACCAGAGATTAAGTCCTAAGGAGAGATaGCTGATTCCATTCTCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: LFMVDEDAYNLLRVNQRLSPKER*LIPFSV Trigger: TACTGAGAATGGAATCAGCCATCTCTCCTTAGGACT...TAATCTCTGGTTCACCCTGAGTAAGTTGTATGCATCTTCATCCACCATGAATAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194786.6 |
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| CDS-3UTR TCA 90 bp | AAAACTGATAAAACAAATAACATTTGGTGGCACACCAACTGTAAACCCAGTTCTAAGTTATATTCCCAGTaGCTCTATCAACCGAGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: KTDKTNNIWWHTNCKPSSKLYSQ*LYQPSR Trigger: TCTGCTCGGTTGATAGAGTCACTGGGAATATAACTT...AGAACTGGGTTTACAGTTGGTGTGCCACCAAATGTTATTTGTTTTATCAGTTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072480.9 ENSMUST00000167200.7 |
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| CDS-3UTR GCA 90 bp | TCACACCATTTTCCTCCTGTAAATAAAAGTTCGTGTGCCAACATGAATGGGCAATTCATAGTCCATATGTaGAATGTTTATCCTTGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: SHHFPPVNKSSCANMNGQFIVHM*NVYPWL Trigger: AAGCCAAGGATAAACATTGCACATATGGACTATGAA...TTGCCCATTCATGTTGGCACACGAACTTTTATTTACAGGAGGAAAATGGTGTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000072480.9 ENSMUST00000163661.8 ENSMUST00000167200.7 |
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| CDS TCA 90 bp | GCTATCCCTCCCTGGACCTCACTTACTCCGTGTGTCCTCACATGCTaGGCTGCTGCTGGTTCCAGCACCTGCGGGGTGTGGTACACCAGA | + |
|
Preference number: 5 (lower is better) Translates to: AIPPWTSLTPCVLTC*AAAGSSTCGVWYTR Trigger: TCTGGTGTACCACACCCCGCAGGTGCTGGAACCAGCAGCAGCTCAGCATGTGAGGACACACGGAGTAAGTGAGGTCCAGGGAGGGATAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194786.6 |
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| CDS-3UTR CAA 90 bp | GGGGAAATTGGGCTGGCAAGCTATCCCTGTCCCCAGTATCCTTGGAGGCCACATGGGGTAGGTGGATCCTaGGAGCACAGTCTGAGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: GEIGLASYPCPQYPWRPHGVGGS*EHSLRR Trigger: CCTCCTCAGACTGTGCTCCAAGGATCCACCTACCCC...ATGTGGCCTCCAAGGATACTGGGGACAGGGATAGCTTGCCAGCCCAATTTCCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000072480.9 ENSMUST00000163661.8 ENSMUST00000167200.7 |
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| CDS-3UTR CAA 90 bp | GCAAGCTATCCCTGTCCCCAGTATCCTTGGAGGCCACATCAGGCCTTGGGCTTGCAGATGAGGACCAGCTaGTCTCCCTCCATCACCCAT | + |
|
Preference number: 5 (lower is better) Translates to: ASYPCPQYPWRPHQALGLQMRTS*SPSITH Trigger: ATGGGTGATGGAGGGAGACAAGCTGGTCCTCATCTG...CAAGCCCAAGGCCTGATGTGGCCTCCAAGGATACTGGGGACAGGGATAGCTTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072480.9 ENSMUST00000163661.8 ENSMUST00000167200.7 |
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| CDS-3UTR CAA 90 bp | TCCCCAGTATCCTTGGAGGCCACATCAGGCCTTGGGCTTGTATGTAGCACTCCATGGGCACCCTGTCCATaGCTGGCCTCACAGGAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: SPVSLEATSGLGLVCSTPWAPCP*LASQEK Trigger: CTTCTCCTGTGAGGCCAGCAATGGACAGGGTGCCCA...TGGAGTGCTACATACAAGCCCAAGGCCTGATGTGGCCTCCAAGGATACTGGGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072480.9 ENSMUST00000163661.8 ENSMUST00000167200.7 |
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| CDS-3UTR CAA 90 bp | ACCCGCAAAGCCATTGATCTCGGCTTTGTGCTCTCTGAGTCGCATTGTCCCTCTTGGGCACCCTGTCCATaGCTGGCCTCACAGGAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: TRKAIDLGFVLSESHCPSWAPCP*LASQEK Trigger: CTTCTCCTGTGAGGCCAGCAATGGACAGGGTGCCCA...AGAGGGACAATGCGACTCAGAGAGCACAAAGCCGAGATCAATGGCTTTGCGGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072480.9 ENSMUST00000163661.8 ENSMUST00000167200.7 ENSMUST00000191666.2 |
||
| CDS-3UTR CAA 90 bp | GCAAAGCCATTGATCTCGGCTTTGTGCTCTCTGAGTCGCATTGTCCCTCTGCTGGGGGTAGGTGGATCCTaGGAGCACAGTCTGAGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: AKPLISALCSLSRIVPLLGVGGS*EHSLRR Trigger: CCTCCTCAGACTGTGCTCCAAGGATCCACCTACCCC...CAGCAGAGGGACAATGCGACTCAGAGAGCACAAAGCCGAGATCAATGGCTTTGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000072480.9 ENSMUST00000163661.8 ENSMUST00000167200.7 |
||
| CDS-3UTR CAA 90 bp | GCAAAGCCATTGATCTCGGCTTTGTGCTCTCTGAGTCGCATTGTCCCTCTGCTGCACCACCTCACTTCGTaGGGCACCCTGTCCATTGCT | + |
|
Preference number: 5 (lower is better) Translates to: AKPLISALCSLSRIVPLLHHLTS*GTLSIA Trigger: AGCAATGGACAGGGTGCCCAACGAAGTGAGGTGGTG...CAGCAGAGGGACAATGCGACTCAGAGAGCACAAAGCCGAGATCAATGGCTTTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072480.9 ENSMUST00000163661.8 ENSMUST00000167200.7 ENSMUST00000191666.2 |
||
| CDS-3UTR CAA 90 bp | ATTGATCTCGGCTTTGTGCTCTCTGAGTCGCATTGTCCCTCTGCTGTAAGACCTGGGGTAGGTGGATCCTaGGAGCACAGTCTGAGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: IDLGFVLSESHCPSAVRPGVGGS*EHSLRR Trigger: CCTCCTCAGACTGTGCTCCAAGGATCCACCTACCCC...AGGTCTTACAGCAGAGGGACAATGCGACTCAGAGAGCACAAAGCCGAGATCAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072480.9 ENSMUST00000163661.8 ENSMUST00000167200.7 |
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| CDS-3UTR CAA 90 bp | TGTGGGGAAATTGGGCTGGCAAGCTATCCCTGTCCCCAGTATCCTTGGAGGCCAAGCCGCACAGTAATATaGATCAGCATCGCTCTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: CGEIGLASYPCPQYPWRPSRTVI*ISIALL Trigger: AAGCAGAGCGATGCTGATCAATATTACTGTGCGGCT...TGGCCTCCAAGGATACTGGGGACAGGGATAGCTTGCCAGCCCAATTTCCCCACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000072480.9 ENSMUST00000163661.8 ENSMUST00000167200.7 |
||
| CDS-3UTR CAA 90 bp | AAGTACTCTAGGGTATGTGTACAGAGGAAGCATGGCTCTGTCTCCACAGCAGACCAGATGAGGACCAGCTaGTCTCCCTCCATCACCCAT | + |
|
Preference number: 5 (lower is better) Translates to: KYSRVCVQRKHGSVSTADQMRTS*SPSITH Trigger: ATGGGTGATGGAGGGAGACAAGCTGGTCCTCATCTG...GTCTGCTGTGGAGACAGAGCCATGCTTCCTCTGTACACATACCCTAGAGTACTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072480.9 ENSMUST00000163661.8 ENSMUST00000167200.7 ENSMUST00000191666.2 |
||
| CDS-3UTR CAA 90 bp | AGCATGGCTCTGTCTCCACAGCAGACCCGCAAAGCCATTGATCTCGGCTTTGTGAGCCGCACAGTAATATaGATCAGCATCGCTCTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: SMALSPQQTRKAIDLGFVSRTVI*ISIALL Trigger: AAGCAGAGCGATGCTGATCAATATTACTGTGCGGCT...CACAAAGCCGAGATCAATGGCTTTGCGGGTCTGCTGTGGAGACAGAGCCATGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072480.9 ENSMUST00000163661.8 ENSMUST00000167200.7 ENSMUST00000191666.2 |
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| CDS-3UTR CAA 90 bp | CCTAGCCTGCATACAACAAAACACAGTGCCACTAAAATGAAGTGTCGCCACAGTTGGGCACCCTGTCCATaGCTGGCCTCACAGGAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: PSLHTTKHSATKMKCRHSWAPCP*LASQEK Trigger: CTTCTCCTGTGAGGCCAGCAATGGACAGGGTGCCCA...ACTGTGGCGACACTTCATTTTAGTGGCACTGTGTTTTGTTGTATGCAGGCTAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072480.9 ENSMUST00000167200.7 |
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| CDS-3UTR CAA 90 bp | GCTGAAAAGAAAGTAGTGGCTGTTCAAGGATGGTTCATGGCTGGCTTCTCTGTAGGGGTAGGTGGATCCTaGGAGCACAGTCTGAGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: AEKKVVAVQGWFMAGFSVGVGGS*EHSLRR Trigger: CCTCCTCAGACTGTGCTCCAAGGATCCACCTACCCC...TACAGAGAAGCCAGCCATGAACCATCCTTGAACAGCCACTACTTTCTTTTCAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000194786.6 |
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| CDS-3UTR CAA 90 bp | CCTCCTGTAAATAAAAGTTCGTGTGCCAACATGAATGGGCAACAACCAGATGCATGGGCACCCTGTCCATaGCTGGCCTCACAGGAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: PPVNKSSCANMNGQQPDAWAPCP*LASQEK Trigger: CTTCTCCTGTGAGGCCAGCAATGGACAGGGTGCCCA...TGCATCTGGTTGTTGCCCATTCATGTTGGCACACGAACTTTTATTTACAGGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000072480.9 ENSMUST00000163661.8 ENSMUST00000167200.7 ENSMUST00000191666.2 |
||
| CDS-3UTR CAA 90 bp | CAACATGAATGGGCAACAACCAGATGCAAATGCTTCTGGCTTCTCCGTCTAAGTCACCACCTCACTTCGTaGGGCACCCTGTCCATTGCT | + |
|
Preference number: 5 (lower is better) Translates to: QHEWATTRCKCFWLLRLSHHLTS*GTLSIA Trigger: AGCAATGGACAGGGTGCCCAACGAAGTGAGGTGGTG...ACTTAGACGGAGAAGCCAGAAGCATTTGCATCTGGTTGTTGCCCATTCATGTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072480.9 ENSMUST00000163661.8 ENSMUST00000167200.7 |
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| CDS-3UTR CAA 90 bp | CCTAGCCTGCATACAACAAAACACAGTGCCACTAAAATGAAGTGTCGCCACAGTCACCACCTCACTTCGTaGGGCACCCTGTCCATTGCT | + |
|
Preference number: 5 (lower is better) Translates to: PSLHTTKHSATKMKCRHSHHLTS*GTLSIA Trigger: AGCAATGGACAGGGTGCCCAACGAAGTGAGGTGGTG...ACTGTGGCGACACTTCATTTTAGTGGCACTGTGTTTTGTTGTATGCAGGCTAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072480.9 ENSMUST00000167200.7 |
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| CDS-3UTR CAA 90 bp | CAACATGAATGGGCAACAACCAGATGCAAATGCTTCTGGCTTCTCCGTCTAAGTCAGATGAGGACCAGCTaGTCTCCCTCCATCACCCAT | + |
|
Preference number: 5 (lower is better) Translates to: QHEWATTRCKCFWLLRLSQMRTS*SPSITH Trigger: ATGGGTGATGGAGGGAGACAAGCTGGTCCTCATCTG...ACTTAGACGGAGAAGCCAGAAGCATTTGCATCTGGTTGTTGCCCATTCATGTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072480.9 ENSMUST00000163661.8 ENSMUST00000167200.7 |
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| CDS-3UTR CAA 90 bp | CTAGGGTATGTGTACAGAGGAAGCATGGCTCTGTCTCCACAGCAGACCCGCAAAGTGAAGGTTGTGTCTTaGTTTCCAGTTGGAAACCCA | + |
|
Preference number: 5 (lower is better) Translates to: LGYVYRGSMALSPQQTRKVKVVS*FPVGNP Trigger: TGGGTTTCCAACTGGAAACAAAGACACAACCTTCAC...TTTGCGGGTCTGCTGTGGAGACAGAGCCATGCTTCCTCTGTACACATACCCTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072480.9 ENSMUST00000163661.8 ENSMUST00000167200.7 ENSMUST00000191666.2 |
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| CDS-3UTR CAA 90 bp | CCTCCTGTAAATAAAAGTTCGTGTGCCAACATGAATGGGCAACAACCAGATGCACACCACCTCACTTCGTaGGGCACCCTGTCCATTGCT | + |
|
Preference number: 5 (lower is better) Translates to: PPVNKSSCANMNGQQPDAHHLTS*GTLSIA Trigger: AGCAATGGACAGGGTGCCCAACGAAGTGAGGTGGTG...TGCATCTGGTTGTTGCCCATTCATGTTGGCACACGAACTTTTATTTACAGGAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000072480.9 ENSMUST00000163661.8 ENSMUST00000167200.7 ENSMUST00000191666.2 |
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| CDS-3UTR CAA 90 bp | GCTTTATTCATGGTGGATGAAGATGCATACAACTTACTCAGGGTGAACCAGAGACACCACCTCACTTCGTaGGGCACCCTGTCCATTGCT | + |
|
Preference number: 5 (lower is better) Translates to: ALFMVDEDAYNLLRVNQRHHLTS*GTLSIA Trigger: AGCAATGGACAGGGTGCCCAACGAAGTGAGGTGGTG...TCTCTGGTTCACCCTGAGTAAGTTGTATGCATCTTCATCCACCATGAATAAAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194786.6 |
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| CDS-3UTR CAA 90 bp | GCTTTATTCATGGTGGATGAAGATGCATACAACTTACTCAGGGTGAACCAGAGACAGATGAGGACCAGCTaGTCTCCCTCCATCACCCAT | + |
|
Preference number: 5 (lower is better) Translates to: ALFMVDEDAYNLLRVNQRQMRTS*SPSITH Trigger: ATGGGTGATGGAGGGAGACAAGCTGGTCCTCATCTG...TCTCTGGTTCACCCTGAGTAAGTTGTATGCATCTTCATCCACCATGAATAAAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194786.6 |
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| CDS-3UTR CAA 90 bp | TTATTCATGGTGGATGAAGATGCATACAACTTACTCAGGGTGAACCAGAGATTATGGGCACCCTGTCCATaGCTGGCCTCACAGGAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: LFMVDEDAYNLLRVNQRLWAPCP*LASQEK Trigger: CTTCTCCTGTGAGGCCAGCAATGGACAGGGTGCCCA...TAATCTCTGGTTCACCCTGAGTAAGTTGTATGCATCTTCATCCACCATGAATAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194786.6 |
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| CDS-3UTR CAA 90 bp | AATTCTAAGTTGATGACAGTGACTCAGAAGTACTCTAGGGTATGTGTACAGAGGCAGATGAGGACCAGCTaGTCTCCCTCCATCACCCAT | + |
|
Preference number: 5 (lower is better) Translates to: NSKLMTVTQKYSRVCVQRQMRTS*SPSITH Trigger: ATGGGTGATGGAGGGAGACAAGCTGGTCCTCATCTG...CCTCTGTACACATACCCTAGAGTACTTCTGAGTCACTGTCATCAACTTAGAATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072480.9 ENSMUST00000163661.8 ENSMUST00000167200.7 ENSMUST00000191666.2 |
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| CDS-3UTR CAA 90 bp | TGCCAACATGAATGGGCAACAACCAGATGCAAATGCTTCTGGCTTCTCCGTCTAGTGAAGGTTGTGTCTTaGTTTCCAGTTGGAAACCCA | + |
|
Preference number: 5 (lower is better) Translates to: CQHEWATTRCKCFWLLRLVKVVS*FPVGNP Trigger: TGGGTTTCCAACTGGAAACAAAGACACAACCTTCAC...TAGACGGAGAAGCCAGAAGCATTTGCATCTGGTTGTTGCCCATTCATGTTGGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072480.9 ENSMUST00000163661.8 ENSMUST00000167200.7 |
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| CDS-3UTR CAA 90 bp | CCTAGCCTGCATACAACAAAACACAGTGCCACTAAAATGAAGTGTCGCCACAGTAGCCGCACAGTAATATaGATCAGCATCGCTCTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: PSLHTTKHSATKMKCRHSSRTVI*ISIALL Trigger: AAGCAGAGCGATGCTGATCAATATTACTGTGCGGCT...ACTGTGGCGACACTTCATTTTAGTGGCACTGTGTTTTGTTGTATGCAGGCTAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072480.9 ENSMUST00000167200.7 |
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| CDS-3UTR CAA 90 bp | CCTCCTGTAAATAAAAGTTCGTGTGCCAACATGAATGGGCAACAACCAGATGCAGTGAAGGTTGTGTCTTaGTTTCCAGTTGGAAACCCA | + |
|
Preference number: 5 (lower is better) Translates to: PPVNKSSCANMNGQQPDAVKVVS*FPVGNP Trigger: TGGGTTTCCAACTGGAAACAAAGACACAACCTTCAC...TGCATCTGGTTGTTGCCCATTCATGTTGGCACACGAACTTTTATTTACAGGAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000072480.9 ENSMUST00000163661.8 ENSMUST00000167200.7 ENSMUST00000191666.2 |
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| CDS-3UTR CAA 90 bp | GTAAATAAAAGTTCGTGTGCCAACATGAATGGGCAACAACCAGATGCAAATGCTAGCCGCACAGTAATATaGATCAGCATCGCTCTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: VNKSSCANMNGQQPDANASRTVI*ISIALL Trigger: AAGCAGAGCGATGCTGATCAATATTACTGTGCGGCT...AGCATTTGCATCTGGTTGTTGCCCATTCATGTTGGCACACGAACTTTTATTTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000072480.9 ENSMUST00000163661.8 ENSMUST00000167200.7 ENSMUST00000191666.2 |
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| CDS-3UTR CAA 90 bp | TTGCTTGTCCAAACTGCTTTATTCATGGTGGATGAAGATGCATACAACTTACTCAGCCGCACAGTAATATaGATCAGCATCGCTCTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: LLVQTALFMVDEDAYNLLSRTVI*ISIALL Trigger: AAGCAGAGCGATGCTGATCAATATTACTGTGCGGCT...GAGTAAGTTGTATGCATCTTCATCCACCATGAATAAAGCAGTTTGGACAAGCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194786.6 |
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| CDS-3UTR CAA 90 bp | TTGCTTTCATCACACCATTTTCCTCCTGTAAATAAAAGTTCGTGTGCCAACATGGTGAAGGTTGTGTCTTaGTTTCCAGTTGGAAACCCA | + |
|
Preference number: 5 (lower is better) Translates to: LLSSHHFPPVNKSSCANMVKVVS*FPVGNP Trigger: TGGGTTTCCAACTGGAAACAAAGACACAACCTTCAC...CATGTTGGCACACGAACTTTTATTTACAGGAGGAAAATGGTGTGATGAAAGCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000072480.9 ENSMUST00000163661.8 ENSMUST00000167200.7 ENSMUST00000191666.2 |
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| CDS-3UTR CAA 90 bp | TTGCTTGTCCAAACTGCTTTATTCATGGTGGATGAAGATGCATACAACTTACTCGTGAAGGTTGTGTCTTaGTTTCCAGTTGGAAACCCA | + |
|
Preference number: 5 (lower is better) Translates to: LLVQTALFMVDEDAYNLLVKVVS*FPVGNP Trigger: TGGGTTTCCAACTGGAAACAAAGACACAACCTTCAC...GAGTAAGTTGTATGCATCTTCATCCACCATGAATAAAGCAGTTTGGACAAGCAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194786.6 |
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| CDS GCA 72 bp | GGACTCACTTACTCCGTGTGTCCTCACATGCTGAGCTaGTGCTGGTTCCAGCACCTGCGGGGTGTGGTACAC | + |
|
Preference number: 6 (lower is better) Translates to: GLTYSVCPHMLS*CWFQHLRGVVH Trigger: GTGTACCACACCCCGCAGGTGCTGGAACCAGCAGCAGCTCAGCATGTGAGGACACACGGAGTAAGTGAGTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072480.9 ENSMUST00000163661.8 ENSMUST00000167200.7 |
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| CDS GCA 72 bp | GACCTCACTTACTCCGTGTGTCCTCACATGCTGAGCTaGTGCTGGTTCCAGCACCTGCGGGGTGTGGTACAC | + |
|
Preference number: 6 (lower is better) Translates to: DLTYSVCPHMLS*CWFQHLRGVVH Trigger: GTGTACCACACCCCGCAGGTGCTGGAACCAGCAGCAGCTCAGCATGTGAGGACACACGGAGTAAGTGAGGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194786.6 |
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| CDS CAA 72 bp | CCAGTGACTCTATCAACCGAGCAGATGAGGACCAGCTaGTCTCCCTCCATCACCCATCCTCCTGGGGGCCGT | + |
|
Preference number: 6 (lower is better) Translates to: PVTLSTEQMRTS*SPSITHPPGGR Trigger: ACGGCCCCCAGGAGGATGGGTGATGGAGGGAGACAAGCTGGTCCTCATCTGCTCGGTTGATAGAGTCACTGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000072480.9 ENSMUST00000163661.8 ENSMUST00000167200.7 ENSMUST00000191666.2 ENSMUST00000194786.6 |
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| CDS CAA 90 bp | GGTTCCAGCACCTGCGGGGTGTGGTACACCAGAGAGTACACTTCATaGCCACTTACAACGTTCACGTTCTCATACAGGGGCTCTGGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: GSSTCGVWYTREYTS*PLTTFTFSYRGSGC Trigger: GCAGCCAGAGCCCCTGTATGAGAACGTGAACGTTGTAAGTGGCAATGAAGTGTACTCTCTGGTGTACCACACCCCGCAGGTGCTGGAACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000072480.9 ENSMUST00000163661.8 ENSMUST00000167200.7 ENSMUST00000194786.6 |
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| CDS CAA 90 bp | GTTATATTCCCAGTGACTCTATCAACCGAGCAGATGAGGACCAGCTaGTCTCCCTCCATCACCCATCCTCCTGGGGGCCGTGTCTTCAAG | + |
|
Preference number: 6 (lower is better) Translates to: VIFPVTLSTEQMRTS*SPSITHPPGGRVFK Trigger: CTTGAAGACACGGCCCCCAGGAGGATGGGTGATGGAGGGAGACAAGCTGGTCCTCATCTGCTCGGTTGATAGAGTCACTGGGAATATAAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000072480.9 ENSMUST00000163661.8 ENSMUST00000167200.7 ENSMUST00000191666.2 ENSMUST00000194786.6 |
||
| CDS CAA 72 bp | ACCTGCGGGGTGTGGTACACCAGAGAGTACACTTCATaGCCACTTACAACGTTCACGTTCTCATACAGGGGC | + |
|
Preference number: 6 (lower is better) Translates to: TCGVWYTREYTS*PLTTFTFSYRG Trigger: GCCCCTGTATGAGAACGTGAACGTTGTAAGTGGCAATGAAGTGTACTCTCTGGTGTACCACACCCCGCAGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000072480.9 ENSMUST00000163661.8 ENSMUST00000167200.7 ENSMUST00000194786.6 |
||
| CDS CAA 72 bp | CTCCTGACTGGATCCTCTGATTGTCTTCCTGTTAAGTaGAGAGCCACCACCTCACTTCGTTGGGCACCCTGT | + |
|
Preference number: 6 (lower is better) Translates to: LLTGSSDCLPVK*RATTSLRWAPC Trigger: ACAGGGTGCCCAACGAAGTGAGGTGGTGGCTCTCAACTTAACAGGAAGACAATCAGAGGATCCAGTCAGGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167200.7 |
||
| CDS CAA 90 bp | CTCACTGGGGATAGGGTCGTGGCCATCGTTAGCCGCACAGTAATATaGATCAGCATCGCTCTGCTTCATGTCACTGATCTCAAACTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: LTGDRVVAIVSRTVI*ISIALLHVTDLKLC Trigger: GCAGAGTTTGAGATCAGTGACATGAAGCAGAGCGATGCTGATCAATATTACTGTGCGGCTAACGATGGCCACGACCCTATCCCCAGTGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000072480.9 ENSMUST00000163661.8 ENSMUST00000167200.7 ENSMUST00000191666.2 ENSMUST00000194786.6 |
||
| CDS TCA 72 bp | AGGTGGATCCTTGGAGCACAGTCTGAGGAGGGCTCCTaGCTGGATCCTCTGATTGTCTTCCTATTTTTCTCT | + |
|
Preference number: 6 (lower is better) Translates to: RWILGAQSEEGS*LDPLIVFLFFS Trigger: AGAGAAAAATAGGAAGACAATCAGAGGATCCAGTCAGGAGCCCTCCTCAGACTGTGCTCCAAGGATCCACCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000072480.9 ENSMUST00000163661.8 ENSMUST00000194786.6 |
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| CDS CAA 72 bp | GATAGGGTCGTGGCCATCGTTAGCCGCACAGTAATATaGATCAGCATCGCTCTGCTTCATGTCACTGATCTC | + |
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Preference number: 6 (lower is better) Translates to: DRVVAIVSRTVI*ISIALLHVTDL Trigger: GAGATCAGTGACATGAAGCAGAGCGATGCTGATCAATATTACTGTGCGGCTAACGATGGCCACGACCCTATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000072480.9 ENSMUST00000163661.8 ENSMUST00000167200.7 ENSMUST00000191666.2 ENSMUST00000194786.6 |
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| CDS CAA 90 bp | CACGGTAGAGACAGCATTTCATCTGGTTGTAAAGAGAAAGCTATGTaGTTAACAGAAAACTGTGCAGCACCACAGATCAGTAGCAGGAGC | + |
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Preference number: 6 (lower is better) Translates to: HGRDSISSGCKEKAM*LTENCAAPQISSRS Trigger: GCTCCTGCTACTGATCTGTGGTGCTGCACAGTTTTCTGTTAACAACATAGCTTTCTCTTTACAACCAGATGAAATGCTGTCTCTACCGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163661.8 |
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| CDS CCA 72 bp | GGCGTCTTCATAGTCCATATGTGCAATGTTTATCCTTaGCTTAGAATAGAGTCCAGAGGAGACCTGAAAGGA | + |
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Preference number: 6 (lower is better) Translates to: GVFIVHMCNVYP*LRIESRGDLKG Trigger: TCCTTTCAGGTCTCCTCTGGACTCTATTCTAAGCCAAGGATAAACATTGCACATATGGACTATGAAGACGCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072480.9 ENSMUST00000163661.8 ENSMUST00000167200.7 |
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