Pregenerated sensors for FCOR (Mus musculus)

Ensembl gene IDs: ENSMUSG00000089665

Ensembl transcript IDs: ENSMUST00000159364.3

Found 4 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS CCA 90 bp	GCGTCTCCCAGTCTATCTGCTTTGGATGGTCCTGCGGTGGTGAAGTaGAAGTCTCGAAGTCCCGGCCCTGGAGCAGCTCTGGTGGAAGGG	+
Preference number: 5 (lower is better) Translates to: ASPSLSALDGPAVVK*KSRSPGPGAALVEG Trigger: CCCTTCCACCAGAGCTGCTCCAGGGCCGGGACTTCGAGACTTCCACTTCACCACCGCAGGACCATCCAAAGCAGATAGACTGGGAGACGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159364.3
CDS CCA 72 bp	GGAAGTCTCGAAGTCCCGGCCCTGGAGCAGCTCTGGTaGAAGGGCCTCCTAAGCATTCCGCAGAGCCCTCTT	+
Preference number: 6 (lower is better) Translates to: GSLEVPALEQLW*KGLLSIPQSPL Trigger: AAGAGGGCTCTGCGGAATGCTTAGGAGGCCCTTCCACCAGAGCTGCTCCAGGGCCGGGACTTCGAGACTTCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159364.3
CDS CCA 72 bp	AGTGGAAGTCTCGAAGTCCCGGCCCTGGAGCAGCTCTaGTGGAAGGGCCTCCTAAGCATTCCGCAGAGCCCT	+
Preference number: 6 (lower is better) Translates to: SGSLEVPALEQL*WKGLLSIPQSP Trigger: AGGGCTCTGCGGAATGCTTAGGAGGCCCTTCCACCAGAGCTGCTCCAGGGCCGGGACTTCGAGACTTCCACT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159364.3
CDS CAA 72 bp	CTGTGTATCTGCGCTGCGTCTCCCAGTCTATCTGCTTaGGATGGTCCTGCGGTGGTGAAGTGGAAGTCTCGA	+
Preference number: 6 (lower is better) Translates to: LCICAASPSLSA*DGPAVVKWKSR Trigger: TCGAGACTTCCACTTCACCACCGCAGGACCATCCAAAGCAGATAGACTGGGAGACGCAGCGCAGATACACAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159364.3

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