Pregenerated sensors for FCNA (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026938Ensembl transcript IDs: ENSMUST00000028307.9
Found 60 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | TGGACAGTGTCCAGAGGGGAGTGTAGAGAGCCCACAATAGATAAGCACACAGACTGTCCCCACATGGCCTaGACATGGCTGAAAGGCTGG | + |
|
Preference number: 2 (lower is better) Translates to: WTVSRGECREPTIDKHTDCPHMA*TWLKGW Trigger: CCAGCCTTTCAGCCATGTCCAGGCCATGTGGGGACA...GTCTGTGTGCTTATCTATTGTGGGCTCTCTACACTCCCCTCTGGACACTGTCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028307.9 |
||
| 3UTR-3UTR CCA 90 bp | TCCAGAGGGGAGTGTAGAGAGCCCACAATAGATAAGCACACAGACTTCAACTTCCACATGGCCTGGACATaGCTGAAAGGCTGGGTGGAG | + |
|
Preference number: 2 (lower is better) Translates to: SRGECREPTIDKHTDFNFHMAWT*LKGWVE Trigger: CTCCACCCAGCCTTTCAGCCATGTCCAGGCCATGTG...GAAGTTGAAGTCTGTGTGCTTATCTATTGTGGGCTCTCTACACTCCCCTCTGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028307.9 |
||
| CDS-3UTR TCA 90 bp | GATCCCTCCCTTCAGTGTCCCCACATGGCCTGGACATGGCTGAAAGGCTGGGTGCCGTCCACTCGTCGTTaGAAAACGGTCCAGCCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: DPSLQCPHMAWTWLKGWVPSTRR*KTVQPP Trigger: TGGGGGCTGGACCGTTTTTCAACGACGAGTGGACGG...CACCCAGCCTTTCAGCCATGTCCAGGCCATGTGGGGACACTGAAGGGAGGGATC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000028307.9 |
||
| CDS-3UTR CCA 90 bp | GATCCCTCCCTTCAGTGTCCCCACATGGCCTGGACATGGCTGAAAGGCTGGGTGACAACCACCTTGTCCTaGGCCCCCAGACCTACGACC | + |
|
Preference number: 4 (lower is better) Translates to: DPSLQCPHMAWTWLKGWVTTTLS*APRPTT Trigger: GGTCGTAGGTCTGGGGGCCCAGGACAAGGTGGTTGT...CACCCAGCCTTTCAGCCATGTCCAGGCCATGTGGGGACACTGAAGGGAGGGATC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028307.9 |
||
| CDS-3UTR CCA 90 bp | GATCCCTCCCTTCAGTGTCCCCACATGGCCTGGACATGGCTGAAAGGCTGGGTGAGGTCCCATCTTTCCTaGGCTGCCCTGAAAGCCCCG | + |
|
Preference number: 4 (lower is better) Translates to: DPSLQCPHMAWTWLKGWVRSHLS*AALKAP Trigger: CGGGGCTTTCAGGGCAGCCCAGGAAAGATGGGACCT...CACCCAGCCTTTCAGCCATGTCCAGGCCATGTGGGGACACTGAAGGGAGGGATC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028307.9 |
||
| CDS-3UTR TCA 90 bp | GATCCCTCCCTTCAGTGTCCCCACATGGCCTGGACATGGCTGAAAGGCTGGGTGTTTCCTGGGCTGCCCTaGAAGCCCCGTTCTCCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: DPSLQCPHMAWTWLKGWVFPGLP*KPRSPL Trigger: AAGAGGAGAACGGGGCTTTCAGGGCAGCCCAGGAAA...CACCCAGCCTTTCAGCCATGTCCAGGCCATGTGGGGACACTGAAGGGAGGGATC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028307.9 |
||
| CDS-3UTR GCA 90 bp | GATCCCTCCCTTCAGTGTCCCCACATGGCCTGGACATGGCTGAAAGGCTGGGTGTTCCTGGCTCTCCTTTaGTGCCGGCAGGTCCCATCT | + |
|
Preference number: 4 (lower is better) Translates to: DPSLQCPHMAWTWLKGWVFLALL*CRQVPS Trigger: AGATGGGACCTGCCGGCAGCAAAGGAGAGCCAGGAA...CACCCAGCCTTTCAGCCATGTCCAGGCCATGTGGGGACACTGAAGGGAGGGATC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028307.9 |
||
| CDS-3UTR CCA 90 bp | GATCCCTCCCTTCAGTGTCCCCACATGGCCTGGACATGGCTGAAAGGCTGGGTGGACTGGTGGCAGTTGTaGTACCACCAGGCTCCATGG | + |
|
Preference number: 4 (lower is better) Translates to: DPSLQCPHMAWTWLKGWVDWWQL*YHQAPW Trigger: CCATGGAGCCTGGTGGTACCACAACTGCCACCAGTC...CACCCAGCCTTTCAGCCATGTCCAGGCCATGTGGGGACACTGAAGGGAGGGATC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028307.9 |
||
| CDS-3UTR CCA 90 bp | AGAGATCCCTCCCTTCAGTGTCCCCACATGGCCTGGACATGGCTGAAAGGCTGGCTTTTCACCCAGAGATaGCGCAGCTCCTGTATCGCC | + |
|
Preference number: 4 (lower is better) Translates to: RDPSLQCPHMAWTWLKGWLFTQR*RSSCIA Trigger: GGCGATACAGGAGCTGCGCCATCTCTGGGTGAAAAG...CCAGCCTTTCAGCCATGTCCAGGCCATGTGGGGACACTGAAGGGAGGGATCTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028307.9 |
||
| CDS-3UTR CCA 90 bp | GATCCCTCCCTTCAGTGTCCCCACATGGCCTGGACATGGCTGAAAGGCTGGGTGTCAACTCGGAGCTCTTaGTTCCCATTGGCTGTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: DPSLQCPHMAWTWLKGWVSTRSS*FPLAVS Trigger: GCTCACAGCCAATGGGAACCAAGAGCTCCGAGTTGA...CACCCAGCCTTTCAGCCATGTCCAGGCCATGTGGGGACACTGAAGGGAGGGATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028307.9 |
||
| CDS-3UTR CCA 90 bp | AGAGATCCCTCCCTTCAGTGTCCCCACATGGCCTGGACATGGCTGAAAGGCTGGTTGAGGTTGGACTGGTaGCAGTTGTGGTACCACCAG | + |
|
Preference number: 4 (lower is better) Translates to: RDPSLQCPHMAWTWLKGWLRLDW*QLWYHQ Trigger: CTGGTGGTACCACAACTGCCACCAGTCCAACCTCAA...CCAGCCTTTCAGCCATGTCCAGGCCATGTGGGGACACTGAAGGGAGGGATCTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028307.9 |
||
| CDS-3UTR GCA 90 bp | TGGACAGTGTCCAGAGGGGAGTGTAGAGAGCCCACAATAGATAAGCACACAGACGGGAGTCTCCTGCAGTaGCCTCCAGAAACTGCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: WTVSRGECREPTIDKHTDGSLLQ*PPETAP Trigger: TGGGGCAGTTTCTGGAGGGCACTGCAGGAGACTCCC...GTCTGTGTGCTTATCTATTGTGGGCTCTCTACACTCCCCTCTGGACACTGTCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028307.9 |
||
| CDS-3UTR CCA 90 bp | TCCAGAGGGGAGTGTAGAGAGCCCACAATAGATAAGCACACAGACTTCAACTTCCCCTTTGGGCCCAGGTaGGCCAGGAAAGCCAGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: SRGECREPTIDKHTDFNFPFGPR*ARKARA Trigger: TGCCCTGGCTTTCCTGGCCCACCTGGGCCCAAAGGG...GAAGTTGAAGTCTGTGTGCTTATCTATTGTGGGCTCTCTACACTCCCCTCTGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028307.9 |
||
| CDS-3UTR CCA 90 bp | AGAGATCCCTCCCTTCAGTGTCCCCACATGGCCTGGACATGGCTGAAAGGCTGGAGTCAGGAAGATGGATaGTGTACCAGCCAGTCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: RDPSLQCPHMAWTWLKGWSQEDG*CTSQSG Trigger: TCCTGACTGGCTGGTACACCATCCATCTTCCTGACT...CCAGCCTTTCAGCCATGTCCAGGCCATGTGGGGACACTGAAGGGAGGGATCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028307.9 |
||
| CDS-3UTR CCA 90 bp | TCCCTTCAGTGTCCCCACATGGCCTGGACATGGCTGAAAGGCTGGGTGGAGACTTACCACCAGGCTCCATaGAACAAAGCTGCACAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: SLQCPHMAWTWLKGWVETYHQAP*NKAAQF Trigger: GAACTGTGCAGCTTTGTTCCATGGAGCCTGGTGGTA...AGTCTCCACCCAGCCTTTCAGCCATGTCCAGGCCATGTGGGGACACTGAAGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028307.9 |
||
| CDS-3UTR GCA 90 bp | TCTAGAGATCCCTCCCTTCAGTGTCCCCACATGGCCTGGACATGGCTGAAAGGCACTCCGTGCCCAGGTTaGCAAAGCCTCTTTTATAGG | + |
|
Preference number: 4 (lower is better) Translates to: SRDPSLQCPHMAWTWLKGTPCPG*QSLFYR Trigger: CCTATAAAAGAGGCTTTGGCAACCTGGGCACGGAGT...GCCTTTCAGCCATGTCCAGGCCATGTGGGGACACTGAAGGGAGGGATCTCTAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028307.9 |
||
| CDS-3UTR TCA 90 bp | TGGACAGTGTCCAGAGGGGAGTGTAGAGAGCCCACAATAGATAAGCACACAGACGGCCAGTTCCCCAGTTaGTGCCATCCGCATAACTCT | + |
|
Preference number: 4 (lower is better) Translates to: WTVSRGECREPTIDKHTDGQFPS*CHPHNS Trigger: AGAGTTATGCGGATGGCATCAACTGGGGAACTGGCC...GTCTGTGTGCTTATCTATTGTGGGCTCTCTACACTCCCCTCTGGACACTGTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028307.9 |
||
| CDS-3UTR TCA 90 bp | TCCAGAGGGGAGTGTAGAGAGCCCACAATAGATAAGCACACAGACTTCAACTTCGAGACAGAGCAGTCCTaGAAAGGCCCACAGCGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: SRGECREPTIDKHTDFNFETEQS*KGPQRR Trigger: CCTACGCTGTGGGCCTTTTCAGGACTGCTCTGTCTC...GAAGTTGAAGTCTGTGTGCTTATCTATTGTGGGCTCTCTACACTCCCCTCTGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028307.9 |
||
| CDS-3UTR TCA 90 bp | TCTAGAGATCCCTCCCTTCAGTGTCCCCACATGGCCTGGACATGGCTGAAAGGCTTCAGATACCTGGAATaGGCTGTACTTGGCATAGGA | + |
|
Preference number: 4 (lower is better) Translates to: SRDPSLQCPHMAWTWLKGFRYLE*AVLGIG Trigger: TCCTATGCCAAGTACAGCTCATTCCAGGTATCTGAA...GCCTTTCAGCCATGTCCAGGCCATGTGGGGACACTGAAGGGAGGGATCTCTAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028307.9 |
||
| CDS-3UTR GCA 90 bp | TCCAGAGGGGAGTGTAGAGAGCCCACAATAGATAAGCACACAGACTTCAACTTCCCATCTTTCCTGGGCTaGCCTGAAAGCCCCGTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: SRGECREPTIDKHTDFNFPSFLG*PESPVL Trigger: GAGAACGGGGCTTTCAGGGCAGCCCAGGAAAGATGG...GAAGTTGAAGTCTGTGTGCTTATCTATTGTGGGCTCTCTACACTCCCCTCTGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028307.9 |
||
| CDS-3UTR GCA 90 bp | TCCCTTCAGTGTCCCCACATGGCCTGGACATGGCTGAAAGGCTGGGTGGAGACTTCCATGGAACAAAGCTaGACAGTTCATGCTATTTGC | + |
|
Preference number: 4 (lower is better) Translates to: SLQCPHMAWTWLKGWVETSMEQS*TVHAIC Trigger: GCAAATAGCATGAACTGTGCAGCTTTGTTCCATGGA...AGTCTCCACCCAGCCTTTCAGCCATGTCCAGGCCATGTGGGGACACTGAAGGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028307.9 |
||
| CDS-3UTR GCA 90 bp | TCCAGAGGGGAGTGTAGAGAGCCCACAATAGATAAGCACACAGACTTCAACTTCGTGTCAGCAAGTCTTTaGAGCTCCGGGGTCCTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: SRGECREPTIDKHTDFNFVSASL*SSGVLS Trigger: AGAGAGGACCCCGGAGCTGCAAAGACTTGCTGACAC...GAAGTTGAAGTCTGTGTGCTTATCTATTGTGGGCTCTCTACACTCCCCTCTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028307.9 |
||
| CDS-3UTR CCA 90 bp | TGGACAGTGTCCAGAGGGGAGTGTAGAGAGCCCACAATAGATAAGCACACAGACGGAATGAGCTGTACTTaGCATAGGAGCCTTTCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: WTVSRGECREPTIDKHTDGMSCT*HRSLSL Trigger: AAGGGAAAGGCTCCTATGCCAAGTACAGCTCATTCC...GTCTGTGTGCTTATCTATTGTGGGCTCTCTACACTCCCCTCTGGACACTGTCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028307.9 |
||
| CDS-3UTR GCA 90 bp | AGAGATCCCTCCCTTCAGTGTCCCCACATGGCCTGGACATGGCTGAAAGGCTGGAAGCTGCACAGTTCATaGTATTTGCATCATTATCTT | + |
|
Preference number: 4 (lower is better) Translates to: RDPSLQCPHMAWTWLKGWKLHSS*YLHHYL Trigger: AAGATAATGATGCAAATAGCATGAACTGTGCAGCTT...CCAGCCTTTCAGCCATGTCCAGGCCATGTGGGGACACTGAAGGGAGGGATCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028307.9 |
||
| CDS-3UTR CCA 90 bp | TGGACAGTGTCCAGAGGGGAGTGTAGAGAGCCCACAATAGATAAGCACACAGACTGTTCTTCAGATACCTaGAATGAGCTGTACTTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: WTVSRGECREPTIDKHTDCSSDT*NELYLA Trigger: TGCCAAGTACAGCTCATTCCAGGTATCTGAAGAACA...GTCTGTGTGCTTATCTATTGTGGGCTCTCTACACTCCCCTCTGGACACTGTCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028307.9 |
||
| CDS-3UTR CCA 90 bp | TCTAGAGATCCCTCCCTTCAGTGTCCCCACATGGCCTGGACATGGCTGAAAGGCTTTGCATCATTATCTTaGTCATGGGTTGTAAATGAC | + |
|
Preference number: 4 (lower is better) Translates to: SRDPSLQCPHMAWTWLKGFASLS*SWVVND Trigger: GTCATTTACAACCCATGACCAAGATAATGATGCAAA...GCCTTTCAGCCATGTCCAGGCCATGTGGGGACACTGAAGGGAGGGATCTCTAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028307.9 |
||
| CDS-3UTR GCA 90 bp | TGGACAGTGTCCAGAGGGGAGTGTAGAGAGCCCACAATAGATAAGCACACAGACACAGTTCATGCTATTTaGATCATTATCTTGGTCATG | + |
|
Preference number: 4 (lower is better) Translates to: WTVSRGECREPTIDKHTDTVHAI*IIILVM Trigger: CATGACCAAGATAATGATGCAAATAGCATGAACTGT...GTCTGTGTGCTTATCTATTGTGGGCTCTCTACACTCCCCTCTGGACACTGTCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028307.9 |
||
| CDS-3UTR CCA 90 bp | TGGACAGTGTCCAGAGGGGAGTGTAGAGAGCCCACAATAGATAAGCACACAGACTCATTATCTTGGTCATaGGTTGTAAATGACATGTTG | + |
|
Preference number: 4 (lower is better) Translates to: WTVSRGECREPTIDKHTDSLSWS*VVNDML Trigger: CAACATGTCATTTACAACCCATGACCAAGATAATGA...GTCTGTGTGCTTATCTATTGTGGGCTCTCTACACTCCCCTCTGGACACTGTCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028307.9 |
||
| CDS-3UTR CAA 90 bp | TCCCTTCAGTGTCCCCACATGGCCTGGACATGGCTGAAAGGCTGGGTGGAGACTCTTCCAGGCTCCCCTTaGGGCCCAGGTGGGCCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: SLQCPHMAWTWLKGWVETLPGSP*GPGGPG Trigger: TCCTGGCCCACCTGGGCCCAAAGGGGAGCCTGGAAG...AGTCTCCACCCAGCCTTTCAGCCATGTCCAGGCCATGTGGGGACACTGAAGGGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028307.9 |
||
| CDS GCA 90 bp | TGGTGTACCAGCCAGTCAGGAAGATGCCCCGTGTCAGCAAGTCTTTaGAGCTCCGGGGTCCTCTCTGGCACAGGGTGTCTCCCAGCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: WCTSQSGRCPVSASL*SSGVLSGTGCLPAP Trigger: AGGAGCTGGGAGACACCCTGTGCCAGAGAGGACCCCGGAGCTGCAAAGACTTGCTGACACGGGGCATCTTCCTGACTGGCTGGTACACCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028307.9 |
||
| CDS CCA 90 bp | TTCTCCTCTTCCAGCAGGGCTTCCAGGCTCCCCTTTGGGCCCAGGTaGGCCAGGAAAGCCAGGGCAACTTTGGATGACAACCACCTTGTC | + |
|
Preference number: 5 (lower is better) Translates to: FSSSSRASRLPFGPR*ARKARATLDDNHLV Trigger: GACAAGGTGGTTGTCATCCAAAGTTGCCCTGGCTTTCCTGGCCCACCTGGGCCCAAAGGGGAGCCTGGAAGCCCTGCTGGAAGAGGAGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028307.9 |
||
| CDS-3UTR CAA 90 bp | TCCCTTCAGTGTCCCCACATGGCCTGGACATGGCTGAAAGGCTGGGTGGAGACTTGGATGACAACCACCTaGTCCTGGGCCCCCAGACCT | + |
|
Preference number: 5 (lower is better) Translates to: SLQCPHMAWTWLKGWVETWMTTT*SWAPRP Trigger: AGGTCTGGGGGCCCAGGACAAGGTGGTTGTCATCCA...AGTCTCCACCCAGCCTTTCAGCCATGTCCAGGCCATGTGGGGACACTGAAGGGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028307.9 |
||
| CDS-3UTR CAA 90 bp | AGAGATCCCTCCCTTCAGTGTCCCCACATGGCCTGGACATGGCTGAAAGGCTGGTTGGACTGGTGGCAGTaGTGGTACCACCAGGCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: RDPSLQCPHMAWTWLKGWLDWWQ*WYHQAP Trigger: TGGAGCCTGGTGGTACCACAACTGCCACCAGTCCAA...CCAGCCTTTCAGCCATGTCCAGGCCATGTGGGGACACTGAAGGGAGGGATCTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028307.9 |
||
| CDS-3UTR CAA 90 bp | TCTAGAGATCCCTCCCTTCAGTGTCCCCACATGGCCTGGACATGGCTGAAAGGCGTCAACTCGGAGCTCTaGGTTCCCATTGGCTGTGAG | + |
|
Preference number: 5 (lower is better) Translates to: SRDPSLQCPHMAWTWLKGVNSEL*VPIGCE Trigger: CTCACAGCCAATGGGAACCAAGAGCTCCGAGTTGAC...GCCTTTCAGCCATGTCCAGGCCATGTGGGGACACTGAAGGGAGGGATCTCTAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028307.9 |
||
| CDS-3UTR CAA 90 bp | TCCCTTCAGTGTCCCCACATGGCCTGGACATGGCTGAAAGGCTGGGTGGAGACTACATGTTGTTGTGCTTaGTCAGGGAGTCTCCTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: SLQCPHMAWTWLKGWVETTCCCA*SGSLLQ Trigger: CTGCAGGAGACTCCCTGACAAAGCACAACAACATGT...AGTCTCCACCCAGCCTTTCAGCCATGTCCAGGCCATGTGGGGACACTGAAGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028307.9 |
||
| CDS GCA 90 bp | GGACTGGTGGCAGTTGTGGTACCACCAGGCTCCATGGAACAAAGCTaGACAGTTCATGCTATTTGCATCATTATCTTGGTCATGGGTTGT | + |
|
Preference number: 5 (lower is better) Translates to: GLVAVVVPPGSMEQS*TVHAICIIILVMGC Trigger: ACAACCCATGACCAAGATAATGATGCAAATAGCATGAACTGTGCAGCTTTGTTCCATGGAGCCTGGTGGTACCACAACTGCCACCAGTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028307.9 |
||
| CDS GCA 90 bp | TTTGCATCATTATCTTGGTCATGGGTTGTAAATGACATGTTGTTGTaGTTTGTCAGGGAGTCTCCTGCAGTGCCCTCCAGAAACTGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: FASLSWSWVVNDMLL*FVRESPAVPSRNCP Trigger: GGGGCAGTTTCTGGAGGGCACTGCAGGAGACTCCCTGACAAAGCACAACAACATGTCATTTACAACCCATGACCAAGATAATGATGCAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028307.9 |
||
| CDS-3UTR CAA 90 bp | TGGACAGTGTCCAGAGGGGAGTGTAGAGAGCCCACAATAGATAAGCACACAGACCACAGTTCATGCTATTaGCATCATTATCTTGGTCAT | + |
|
Preference number: 5 (lower is better) Translates to: WTVSRGECREPTIDKHTDHSSCY*HHYLGH Trigger: ATGACCAAGATAATGATGCAAATAGCATGAACTGTG...GTCTGTGTGCTTATCTATTGTGGGCTCTCTACACTCCCCTCTGGACACTGTCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028307.9 |
||
| CDS CCA 90 bp | CCATGGAACAAAGCTGCACAGTTCATGCTATTTGCATCATTATCTTaGTCATGGGTTGTAAATGACATGTTGTTGTGCTTTGTCAGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: PWNKAAQFMLFASLS*SWVVNDMLLCFVRE Trigger: CTCCCTGACAAAGCACAACAACATGTCATTTACAACCCATGACCAAGATAATGATGCAAATAGCATGAACTGTGCAGCTTTGTTCCATGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028307.9 |
||
| CDS GCA 72 bp | CTCCCGGGGGCCCCATGGTTCCTGGCTCTCCTTTGCTaGCGGCAGGTCCCATCTTTCCTGGGCTGCCCTGAA | + |
|
Preference number: 6 (lower is better) Translates to: LPGAPWFLALLC*RQVPSFLGCPE Trigger: TTCAGGGCAGCCCAGGAAAGATGGGACCTGCCGGCAGCAAAGGAGAGCCAGGAACCATGGGGCCCCCGGGAG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028307.9 |
||
| CDS CAA 72 bp | TTAACTCCCGGGGGCCCCATGGTTCCTGGCTCTCCTTaGCTGCCGGCAGGTCCCATCTTTCCTGGGCTGCCC | + |
|
Preference number: 6 (lower is better) Translates to: LTPGGPMVPGSP*LPAGPIFPGLP Trigger: GGGCAGCCCAGGAAAGATGGGACCTGCCGGCAGCAAAGGAGAGCCAGGAACCATGGGGCCCCCGGGAGTTAA 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028307.9 |
||
| CDS CAA 72 bp | CGTTCTCCTCTTCCAGCAGGGCTTCCAGGCTCCCCTTaGGGCCCAGGTGGGCCAGGAAAGCCAGGGCAACTT | + |
|
Preference number: 6 (lower is better) Translates to: RSPLPAGLPGSP*GPGGPGKPGQL Trigger: AAGTTGCCCTGGCTTTCCTGGCCCACCTGGGCCCAAAGGGGAGCCTGGAAGCCCTGCTGGAAGAGGAGAACG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028307.9 |
||
| CDS CCA 72 bp | TTGGGCCCAGGTGGGCCAGGAAAGCCAGGGCAACTTTaGATGACAACCACCTTGTCCTGGGCCCCCAGACCT | + |
|
Preference number: 6 (lower is better) Translates to: LGPGGPGKPGQL*MTTTLSWAPRP Trigger: AGGTCTGGGGGCCCAGGACAAGGTGGTTGTCATCCAAAGTTGCCCTGGCTTTCCTGGCCCACCTGGGCCCAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028307.9 |
||
| CDS CAA 72 bp | TTTGGGCCCAGGTGGGCCAGGAAAGCCAGGGCAACTTaGGATGACAACCACCTTGTCCTGGGCCCCCAGACC | + |
|
Preference number: 6 (lower is better) Translates to: FGPRWARKARAT*DDNHLVLGPQT Trigger: GGTCTGGGGGCCCAGGACAAGGTGGTTGTCATCCAAAGTTGCCCTGGCTTTCCTGGCCCACCTGGGCCCAAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028307.9 |
||
| CDS CAA 90 bp | ATGGTGTACCAGCCAGTCAGGAAGATGCCCCGTGTCAGCAAGTCTTaGCAGCTCCGGGGTCCTCTCTGGCACAGGGTGTCTCCCAGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: MVYQPVRKMPRVSKS*QLRGPLWHRVSPSS Trigger: GGAGCTGGGAGACACCCTGTGCCAGAGAGGACCCCGGAGCTGCAAAGACTTGCTGACACGGGGCATCTTCCTGACTGGCTGGTACACCAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028307.9 |
||
| CDS GCA 72 bp | AGCCAGTCAGGAAGATGCCCCGTGTCAGCAAGTCTTTaGAGCTCCGGGGTCCTCTCTGGCACAGGGTGTCTC | + |
|
Preference number: 6 (lower is better) Translates to: SQSGRCPVSASL*SSGVLSGTGCL Trigger: GAGACACCCTGTGCCAGAGAGGACCCCGGAGCTGCAAAGACTTGCTGACACGGGGCATCTTCCTGACTGGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028307.9 |
||
| CDS CAA 72 bp | CAGCCAGTCAGGAAGATGCCCCGTGTCAGCAAGTCTTaGCAGCTCCGGGGTCCTCTCTGGCACAGGGTGTCT | + |
|
Preference number: 6 (lower is better) Translates to: QPVRKMPRVSKS*QLRGPLWHRVS Trigger: AGACACCCTGTGCCAGAGAGGACCCCGGAGCTGCAAAGACTTGCTGACACGGGGCATCTTCCTGACTGGCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028307.9 |
||
| CDS CCA 72 bp | CGTGTCAGCAAGTCTTTGCAGCTCCGGGGTCCTCTCTaGCACAGGGTGTCTCCCAGCTCCTTTTCACCCAGA | + |
|
Preference number: 6 (lower is better) Translates to: RVSKSLQLRGPL*HRVSPSSFSPR Trigger: TCTGGGTGAAAAGGAGCTGGGAGACACCCTGTGCCAGAGAGGACCCCGGAGCTGCAAAGACTTGCTGACACG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028307.9 |
||
| CDS CAA 90 bp | CCAGGTGGGCCAGGAAAGCCAGGGCAACTTTGGATGACAACCACCTaGTCCTGGGCCCCCAGACCTACGACCTTAACATCTGGACAGGCA | + |
|
Preference number: 6 (lower is better) Translates to: PGGPGKPGQLWMTTT*SWAPRPTTLTSGQA Trigger: TGCCTGTCCAGATGTTAAGGTCGTAGGTCTGGGGGCCCAGGACAAGGTGGTTGTCATCCAAAGTTGCCCTGGCTTTCCTGGCCCACCTGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028307.9 |
||
| CDS GCA 72 bp | CAGGAAGATGGATGGTGTACCAGCCAGTCAGGAAGATaGCCCGTGTCAGCAAGTCTTTGCAGCTCCGGGGTC | + |
|
Preference number: 6 (lower is better) Translates to: QEDGWCTSQSGR*PVSASLCSSGV Trigger: GACCCCGGAGCTGCAAAGACTTGCTGACACGGGGCATCTTCCTGACTGGCTGGTACACCATCCATCTTCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028307.9 |
||
| CDS CCA 72 bp | GCACAGGGTGTCTCCCAGCTCCTTTTCACCCAGAGATaGCGCAGCTCCTGTATCGCCTTTCTCCCCTTTAAC | + |
|
Preference number: 6 (lower is better) Translates to: AQGVSQLLFTQR*RSSCIAFLPFN Trigger: GTTAAAGGGGAGAAAGGCGATACAGGAGCTGCGCCATCTCTGGGTGAAAAGGAGCTGGGAGACACCCTGTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028307.9 |
||
| CDS TCA 72 bp | TGTAGGAGTAGTGGTGACCTTGGCCAGTTCCCCAGTTaGTGCCATCCGCATAACTCTCATGGGAGCCAGACA | + |
|
Preference number: 6 (lower is better) Translates to: CRSSGDLGQFPS*CHPHNSHGSQT Trigger: TGTCTGGCTCCCATGAGAGTTATGCGGATGGCATCAACTGGGGAACTGGCCAAGGTCACCACTACTCCTACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028307.9 |
||
| CDS CAA 90 bp | TGCTCGGATTTTCATCTCGGCAACCTTGTAGGAGTAGTGGTGACCTaGGCCAGTTCCCCAGTTGATGCCATCCGCATAACTCTCATGGGA | + |
|
Preference number: 6 (lower is better) Translates to: CSDFHLGNLVGVVVT*ASSPVDAIRITLMG Trigger: TCCCATGAGAGTTATGCGGATGGCATCAACTGGGGAACTGGCCAAGGTCACCACTACTCCTACAAGGTTGCCGAGATGAAAATCCGAGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028307.9 |
||
| CDS GCA 72 bp | TTTGTCAGGGAGTCTCCTGCAGTGCCCTCCAGAAACTaGCCCAAGGTCAGCTTGTATTTCTCCTGTTCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: FVRESPAVPSRN*PKVSLYFSCSS Trigger: TGAAGAACAGGAGAAATACAAGCTGACCTTGGGGCAGTTTCTGGAGGGCACTGCAGGAGACTCCCTGACAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028307.9 |
||
| CDS CAA 72 bp | TTTCATCTCGGCAACCTTGTAGGAGTAGTGGTGACCTaGGCCAGTTCCCCAGTTGATGCCATCCGCATAACT | + |
|
Preference number: 6 (lower is better) Translates to: FHLGNLVGVVVT*ASSPVDAIRIT Trigger: AGTTATGCGGATGGCATCAACTGGGGAACTGGCCAAGGTCACCACTACTCCTACAAGGTTGCCGAGATGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028307.9 |
||
| CDS GCA 72 bp | TTATCTTGGTCATGGGTTGTAAATGACATGTTGTTGTaGTTTGTCAGGGAGTCTCCTGCAGTGCCCTCCAGA | + |
|
Preference number: 6 (lower is better) Translates to: LSWSWVVNDMLL*FVRESPAVPSR Trigger: TCTGGAGGGCACTGCAGGAGACTCCCTGACAAAGCACAACAACATGTCATTTACAACCCATGACCAAGATAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028307.9 |
||
| CDS CAA 72 bp | TCATTATCTTGGTCATGGGTTGTAAATGACATGTTGTaGTGCTTTGTCAGGGAGTCTCCTGCAGTGCCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: SLSWSWVVNDML*CFVRESPAVPS Trigger: GGAGGGCACTGCAGGAGACTCCCTGACAAAGCACAACAACATGTCATTTACAACCCATGACCAAGATAATGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028307.9 |
||
| CDS TCA 72 bp | CAGCTTGTATTTCTCCTGTTCTTCAGATACCTGGAATaGGCTGTACTTGGCATAGGAGCCTTTCCCTTGGAA | + |
|
Preference number: 6 (lower is better) Translates to: QLVFLLFFRYLE*AVLGIGAFPLE Trigger: TTCCAAGGGAAAGGCTCCTATGCCAAGTACAGCTCATTCCAGGTATCTGAAGAACAGGAGAAATACAAGCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028307.9 |
||
| CDS CCA 72 bp | TCTCCTGTTCTTCAGATACCTGGAATGAGCTGTACTTaGCATAGGAGCCTTTCCCTTGGAAATCTTGTAAGT | + |
|
Preference number: 6 (lower is better) Translates to: SPVLQIPGMSCT*HRSLSLGNLVS Trigger: ACTTACAAGATTTCCAAGGGAAAGGCTCCTATGCCAAGTACAGCTCATTCCAGGTATCTGAAGAACAGGAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028307.9 |
||
| CDS CCA 72 bp | AAAGCTGCACAGTTCATGCTATTTGCATCATTATCTTaGTCATGGGTTGTAAATGACATGTTGTTGTGCTTT | + |
|
Preference number: 6 (lower is better) Translates to: KAAQFMLFASLS*SWVVNDMLLCF Trigger: AAAGCACAACAACATGTCATTTACAACCCATGACCAAGATAATGATGCAAATAGCATGAACTGTGCAGCTTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028307.9 |
||