Pregenerated sensors for FCHSD1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000038524Ensembl transcript IDs: ENSMUST00000043437.14, ENSMUST00000163131.8, ENSMUST00000164222.2, ENSMUST00000166148.8
Found 197 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TGCTCCCTGAGCCGCCACCCTCCCAGGCCGCAGCCACCCACTCAGTaGAGAACGGAAGACTCCAGGATGCCAGCCTCGTCCCTTGTACAC | + |
|
Preference number: 1 (lower is better) Translates to: CSLSRHPPRPQPPTQ*RTEDSRMPASSLVH Trigger: GTGTACAAGGGACGAGGCTGGCATCCTGGAGTCTTCCGTTCTGCACTGAGTGGGTGGCTGCGGCCTGGGAGGGTGGCGGCTCAGGGAGCA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043437.14 |
||
| 3UTR GCA 90 bp | GCAGGACGGAGCCCCCTCCCATCATCACACAGTGCACCTTGGCTCTaGAGCTCCTTGCATCCACTGCAGCCGCAGCAAGAGGCCCCCACT | + |
|
Preference number: 1 (lower is better) Translates to: AGRSPLPSSHSAPWL*SSLHPLQPQQEAPT Trigger: AGTGGGGGCCTCTTGCTGCGGCTGCAGTGGATGCAAGGAGCTGCAGAGCCAAGGTGCACTGTGTGATGATGGGAGGGGGCTCCGTCCTGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000043437.14 |
||
| 3UTR CCA 90 bp | CAGCCTGCAGGACGGAGCCCCCTCCCATCATCACACAGTGCACCTTaGCTCTGCAGCTCCTTGCATCCACTGCAGCCGCAGCAAGAGGCC | + |
|
Preference number: 1 (lower is better) Translates to: QPAGRSPLPSSHSAP*LCSSLHPLQPQQEA Trigger: GGCCTCTTGCTGCGGCTGCAGTGGATGCAAGGAGCTGCAGAGCCAAGGTGCACTGTGTGATGATGGGAGGGGGCTCCGTCCTGCAGGCTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043437.14 |
||
| 3UTR TCA 90 bp | GCATTCAGGGTGGGGTTGACCACAGAGGCAGGGGGAAGACGGAGATaGGCCAGAGCCGTGCAAGGCTTTGGGAGATGGGTTCCAGCCCAC | + |
|
Preference number: 1 (lower is better) Translates to: AFRVGLTTEAGGRRR*ARAVQGFGRWVPAH Trigger: GTGGGCTGGAACCCATCTCCCAAAGCCTTGCACGGCTCTGGCTCATCTCCGTCTTCCCCCTGCCTCTGTGGTCAACCCCACCCTGAATGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043437.14 |
||
| 3UTR CCA 90 bp | GATATCGGTCAGACGCCTGGAGTCTGGTTTGGCCTCCAGCCACAGTaGCATCCAGAAGGCAGCGCCAGGCACCAAACACTGTCCTGCTGT | + |
|
Preference number: 1 (lower is better) Translates to: DIGQTPGVWFGLQPQ*HPEGSARHQTLSCC Trigger: ACAGCAGGACAGTGTTTGGTGCCTGGCGCTGCCTTCTGGATGCCACTGTGGCTGGAGGCCAAACCAGACTCCAGGCGTCTGACCGATATC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164222.2 |
||
| 3UTR CCA 90 bp | GGACACCTCAGGTCAGCAGGTATGAAGACATGCCCAGGGCTGCACTaGGCAGTGGCGGACACACATCTTACCATCCCTACTCTGGGCAAC | + |
|
Preference number: 1 (lower is better) Translates to: GHLRSAGMKTCPGLH*AVADTHLTIPTLGN Trigger: GTTGCCCAGAGTAGGGATGGTAAGATGTGTGTCCGCCACTGCCCAGTGCAGCCCTGGGCATGTCTTCATACCTGCTGACCTGAGGTGTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043437.14 |
||
| 3UTR CCA 90 bp | TGCCTATGTCACTCCAGACCATTGAAGGGGTGGTTTCTGTCAGCGTaGAGACAGGGACAGCAGCATCACTGGCGGGCAATGACTCCTGGC | + |
|
Preference number: 1 (lower is better) Translates to: CLCHSRPLKGWFLSA*RQGQQHHWRAMTPG Trigger: GCCAGGAGTCATTGCCCGCCAGTGATGCTGCTGTCCCTGTCTCCACGCTGACAGAAACCACCCCTTCAATGGTCTGGAGTGACATAGGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043437.14 |
||
| 3UTR GCA 90 bp | ACAGCCAACCAAACTGGACACCTCAGGTCAGCAGGTATGAAGACATaGCCAGGGCTGCACTGGGCAGTGGCGGACACACATCTTACCATC | + |
|
Preference number: 1 (lower is better) Translates to: TANQTGHLRSAGMKT*PGLHWAVADTHLTI Trigger: GATGGTAAGATGTGTGTCCGCCACTGCCCAGTGCAGCCCTGGGCATGTCTTCATACCTGCTGACCTGAGGTGTCCAGTTTGGTTGGCTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043437.14 |
||
| 3UTR CCA 90 bp | CTTAGGCCCCCTGCCATCTTGGCACAAGAGGCCCAGGCCCTGGCTTaGACTTCATACCCTTTATTCACTGTCAATAAATCCGCTCAGACC | + |
|
Preference number: 1 (lower is better) Translates to: LRPPAILAQEAQALA*TSYPLFTVNKSAQT Trigger: GGTCTGAGCGGATTTATTGACAGTGAATAAAGGGTATGAAGTCCAAGCCAGGGCCTGGGCCTCTTGTGCCAAGATGGCAGGGGGCCTAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043437.14 |
||
| 3UTR CCA 90 bp | AGCACCTTAGGCCCCCTGCCATCTTGGCACAAGAGGCCCAGGCCCTaGCTTGGACTTCATACCCTTTATTCACTGTCAATAAATCCGCTC | + |
|
Preference number: 1 (lower is better) Translates to: STLGPLPSWHKRPRP*LGLHTLYSLSINPL Trigger: GAGCGGATTTATTGACAGTGAATAAAGGGTATGAAGTCCAAGCCAGGGCCTGGGCCTCTTGTGCCAAGATGGCAGGGGGCCTAAGGTGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043437.14 |
||
| 3UTR TCA 90 bp | TTCCCTACCCAAGGTCAAACCCAGGGAGGGACGTTTAGGAGCCTCTaGGCTGTAAGCCTGAGTTGCAACATTCTCTTCCCACCCAGATTC | + |
|
Preference number: 1 (lower is better) Translates to: FPTQGQTQGGTFRSL*AVSLSCNILFPPRF Trigger: GAATCTGGGTGGGAAGAGAATGTTGCAACTCAGGCTTACAGCTCAGAGGCTCCTAAACGTCCCTCCCTGGGTTTGACCTTGGGTAGGGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043437.14 |
||
| 3UTR CCA 90 bp | CAACTCCCTGAATCCTGGAGGTGGGTGAACTGTAAGCTTAGTGTGTaGGGAGCGGGCACAGGTTCCTCCAGGAGATACAATACAATGCCT | + |
|
Preference number: 1 (lower is better) Translates to: QLPESWRWVNCKLSV*GAGTGSSRRYNTMP Trigger: AGGCATTGTATTGTATCTCCTGGAGGAACCTGTGCCCGCTCCCCACACACTAAGCTTACAGTTCACCCACCTCCAGGATTCAGGGAGTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043437.14 |
||
| 3UTR TCA 90 bp | ACATCGAGAAAGATTGCAGCTTTTGCCTATGTCACTCCAGACCATTaGAGGGGTGGTTTCTGTCAGCGTGGAGACAGGGACAGCAGCATC | + |
|
Preference number: 1 (lower is better) Translates to: TSRKIAAFAYVTPDH*RGGFCQRGDRDSSI Trigger: GATGCTGCTGTCCCTGTCTCCACGCTGACAGAAACCACCCCTTCAATGGTCTGGAGTGACATAGGCAAAAGCTGCAATCTTTCTCGATGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043437.14 |
||
| 3UTR TCA 90 bp | CAGGTTCCTCCAGGAGATACAATACAATGCCTGGAGAACAGAGCTTaGCTAGGCAACAACACTGCTTCCCTTCCTTTCTTCCAAGCCTCA | + |
|
Preference number: 1 (lower is better) Translates to: QVPPGDTIQCLENRA*LGNNTASLPFFQAS Trigger: TGAGGCTTGGAAGAAAGGAAGGGAAGCAGTGTTGTTGCCTAGTCAAGCTCTGTTCTCCAGGCATTGTATTGTATCTCCTGGAGGAACCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043437.14 |
||
| 3UTR GCA 90 bp | CTTTATTCACTGTCAATAAATCCGCTCAGACCATTACAGTTGCTCTaGATCCTGGCTCCAGCTCCTTCTGACTTCCAAGGTCTGCTCCTC | + |
|
Preference number: 1 (lower is better) Translates to: LYSLSINPLRPLQLL*ILAPAPSDFQGLLL Trigger: GAGGAGCAGACCTTGGAAGTCAGAAGGAGCTGGAGCCAGGATGCAGAGCAACTGTAATGGTCTGAGCGGATTTATTGACAGTGAATAAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043437.14 |
||
| 3UTR-3UTR TCA 90 bp | ACTGCAGCCGCAGCAAGAGGCCCCCACTTGTCCGTCAGGGTCGCTCTAAGGAAGTACATGGTCCCCGGCTaGGAGCCCTCAGGAGGAGCC | + |
|
Preference number: 2 (lower is better) Translates to: TAAAARGPHLSVRVALRKYMVPG*EPSGGA Trigger: GGCTCCTCCTGAGGGCTCTCAGCCGGGGACCATGTA...CTTCCTTAGAGCGACCCTGACGGACAAGTGGGGGCCTCTTGCTGCGGCTGCAGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043437.14 |
||
| 3UTR-3UTR TCA 90 bp | ACATGGTCCCCGGCTGAGAGCCCTCAGGAGGAGCCCCTCCCAATTCCCAGCCCCCTCCACCCATGGAGGTaGGAACGGACATCGAGAAAG | + |
|
Preference number: 2 (lower is better) Translates to: TWSPAESPQEEPLPIPSPLHPWR*ERTSRK Trigger: CTTTCTCGATGTCCGTTCTCACCTCCATGGGTGGAG...GGGGCTGGGAATTGGGAGGGGCTCCTCCTGAGGGCTCTCAGCCGGGGACCATGT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000043437.14 |
||
| 3UTR-3UTR TCA 90 bp | ACATGGTCCCCGGCTGAGAGCCCTCAGGAGGAGCCCCTCCCAATTCCCAGCCCCAACAATGGGAGGGGGTaGTGCATGGGTCCAAATCCC | + |
|
Preference number: 2 (lower is better) Translates to: TWSPAESPQEEPLPIPSPNNGRG*CMGPNP Trigger: GGGATTTGGACCCATGCATCACCCCCTCCCATTGTT...GGGGCTGGGAATTGGGAGGGGCTCCTCCTGAGGGCTCTCAGCCGGGGACCATGT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000043437.14 |
||
| 3UTR CAA 90 bp | AGCCCCCTCCCATCATCACACAGTGCACCTTGGCTCTGCAGCTCCTaGCATCCACTGCAGCCGCAGCAAGAGGCCCCCACTTGTCCGTCA | + |
|
Preference number: 2 (lower is better) Translates to: SPLPSSHSAPWLCSS*HPLQPQQEAPTCPS Trigger: TGACGGACAAGTGGGGGCCTCTTGCTGCGGCTGCAGTGGATGCAAGGAGCTGCAGAGCCAAGGTGCACTGTGTGATGATGGGAGGGGGCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000043437.14 |
||
| 3UTR CAA 90 bp | CTGCAGCTCCTTGCATCCACTGCAGCCGCAGCAAGAGGCCCCCACTaGTCCGTCAGGGTCGCTCTAAGGAAGGAAAAAGCCGTCCCAGAC | + |
|
Preference number: 2 (lower is better) Translates to: LQLLASTAAAARGPH*SVRVALRKEKAVPD Trigger: GTCTGGGACGGCTTTTTCCTTCCTTAGAGCGACCCTGACGGACAAGTGGGGGCCTCTTGCTGCGGCTGCAGTGGATGCAAGGAGCTGCAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000043437.14 |
||
| 3UTR-3UTR GCA 90 bp | CCCCTGCCATCTTGGCACAAGAGGCCCAGGCCCTGGCTTGGACTTCATACCCTTCTGACTTCCAAGGTCTaGTCCTCTCCTGGCCCCAGG | + |
|
Preference number: 2 (lower is better) Translates to: PLPSWHKRPRPWLGLHTLLTSKV*SSPGPR Trigger: CCTGGGGCCAGGAGAGGAGCAGACCTTGGAAGTCAG...AAGGGTATGAAGTCCAAGCCAGGGCCTGGGCCTCTTGTGCCAAGATGGCAGGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043437.14 |
||
| 3UTR-3UTR CCA 90 bp | TGTGTGGGGAGCGGGCACAGGTTCCTCCAGGAGATACAATACAATGCCTGGAGAGGCCCCCTGCCATCTTaGCACAAGAGGCCCAGGCCC | + |
|
Preference number: 2 (lower is better) Translates to: CVGSGHRFLQEIQYNAWRGPLPS*HKRPRP Trigger: GGGCCTGGGCCTCTTGTGCCAAGATGGCAGGGGGCC...TCTCCAGGCATTGTATTGTATCTCCTGGAGGAACCTGTGCCCGCTCCCCACACA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043437.14 |
||
| 3UTR-3UTR CCA 90 bp | TGTGCTGATGGGTTACCAGCAGGCATTGCCAGGGGACGGATAGCCAGGAAGGCTGGACAGCAGCATCACTaGCGGGCAATGACTCCTGGC | + |
|
Preference number: 2 (lower is better) Translates to: CADGLPAGIARGRIARKAGQQHH*RAMTPG Trigger: GCCAGGAGTCATTGCCCGCCAGTGATGCTGCTGTCC...AGCCTTCCTGGCTATCCGTCCCCTGGCAATGCCTGCTGGTAACCCATCAGCACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043437.14 |
||
| 3UTR-3UTR GCA 90 bp | CCACTGGACAGCTCTGCCCCTCAGTTGAGGGACCAACTCTACTTCCATCTGGAGCACCTGCCAACAGGTTaGCTGGCCTGCCTTCCCCAA | + |
|
Preference number: 2 (lower is better) Translates to: PLDSSAPQLRDQLYFHLEHLPTG*LACLPQ Trigger: TTGGGGAAGGCAGGCCAGGCAACCTGTTGGCAGGTG...CTCCAGATGGAAGTAGAGTTGGTCCCTCAACTGAGGGGCAGAGCTGTCCAGTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043437.14 |
||
| 3UTR-3UTR GCA 90 bp | TCCAGCCACAGTGGCATCCAGAAGGCAGCGCCAGGCACCAAACACTGTCCTGCTGCCTCTCCACTCCGCTaGCCTTCTCTCTTCAGGAAT | + |
|
Preference number: 2 (lower is better) Translates to: SSHSGIQKAAPGTKHCPAASPLR*PSLFRN Trigger: ATTCCTGAAGAGAGAAGGGCAGCGGAGTGGAGAGGC...AGCAGGACAGTGTTTGGTGCCTGGCGCTGCCTTCTGGATGCCACTGTGGCTGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164222.2 |
||
| 3UTR CAA 90 bp | CCTTGTACACTTGAGGGGACCCCTGGAACCTCTGCAGAACTGAACTaGGGCCCTAGAGGGAGAGACCCAAGCCCAGGGCTGTCTAGTCAA | + |
|
Preference number: 2 (lower is better) Translates to: PCTLEGTPGTSAELN*GPRGRDPSPGLSSQ Trigger: TTGACTAGACAGCCCTGGGCTTGGGTCTCTCCCTCTAGGGCCCAAGTTCAGTTCTGCAGAGGTTCCAGGGGTCCCCTCAAGTGTACAAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043437.14 |
||
| 3UTR-3UTR TCA 90 bp | CCCCTGCCATCTTGGCACAAGAGGCCCAGGCCCTGGCTTGGACTTCATACCCTTGTCACTCCAGACCATTaGAGGGGTGGTTTCTGTCAG | + |
|
Preference number: 2 (lower is better) Translates to: PLPSWHKRPRPWLGLHTLVTPDH*RGGFCQ Trigger: CTGACAGAAACCACCCCTTCAATGGTCTGGAGTGAC...AAGGGTATGAAGTCCAAGCCAGGGCCTGGGCCTCTTGTGCCAAGATGGCAGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043437.14 |
||
| 3UTR-3UTR TCA 90 bp | CTCAGGAGTCTCTACCACCAGAAGCAGGGGGTATGTGAGCCAAGTCTCCCTGAGGCTCTGCCCCTCAGTTaGGGGACCAACTCTACTTCC | + |
|
Preference number: 2 (lower is better) Translates to: LRSLYHQKQGVCEPSLPEALPLS*GTNSTS Trigger: GGAAGTAGAGTTGGTCCCTCAACTGAGGGGCAGAGC...CTCAGGGAGACTTGGCTCACATACCCCCTGCTTCTGGTGGTAGAGACTCCTGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000043437.14 |
||
| 3UTR-3UTR CCA 90 bp | CTTCACTGTGCTGATGGGTTACCAGCAGGCATTGCCAGGGGACGGATAGCCAGGAAGAGGCCCAGGCCCTaGCTTGGACTTCATACCCTT | + |
|
Preference number: 2 (lower is better) Translates to: LHCADGLPAGIARGRIARKRPRP*LGLHTL Trigger: AAGGGTATGAAGTCCAAGCCAGGGCCTGGGCCTCTT...CCTGGCTATCCGTCCCCTGGCAATGCCTGCTGGTAACCCATCAGCACAGTGAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043437.14 |
||
| 3UTR-3UTR GCA 90 bp | CTTCACTGTGCTGATGGGTTACCAGCAGGCATTGCCAGGGGACGGATAGCCAGGTCAGACCATTACAGTTaGTCTGCATCCTGGCTCCAG | + |
|
Preference number: 2 (lower is better) Translates to: LHCADGLPAGIARGRIARSDHYS*SASWLQ Trigger: CTGGAGCCAGGATGCAGAGCAACTGTAATGGTCTGA...CCTGGCTATCCGTCCCCTGGCAATGCCTGCTGGTAACCCATCAGCACAGTGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043437.14 |
||
| 3UTR-3UTR CCA 90 bp | CTTCACTGTGCTGATGGGTTACCAGCAGGCATTGCCAGGGGACGGATAGCCAGGAGACCATTGAAGGGGTaGTTTCTGTCAGCGTGGAGA | + |
|
Preference number: 2 (lower is better) Translates to: LHCADGLPAGIARGRIARRPLKG*FLSAWR Trigger: TCTCCACGCTGACAGAAACCACCCCTTCAATGGTCT...CCTGGCTATCCGTCCCCTGGCAATGCCTGCTGGTAACCCATCAGCACAGTGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043437.14 |
||
| 3UTR-3UTR CCA 90 bp | ATCTCACCCTCCTGCCCTCTATCTAAACTACTCAAGCCCATCAACTCCCTGAATCTAGAGCGTGGCTGCTaGGACCAGGCCCTACCCTCG | + |
|
Preference number: 2 (lower is better) Translates to: ISPSCPLSKLLKPINSLNLERGC*DQALPS Trigger: CGAGGGTAGGGCCTGGTCCCAGCAGCCACGCTCTAG...ATTCAGGGAGTTGATGGGCTTGAGTAGTTTAGATAGAGGGCAGGAGGGTGAGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043437.14 |
||
| 3UTR-3UTR TCA 90 bp | GTCTCTACCACCAGAAGCAGGGGGTATGTGAGCCAAGTCTCCCTGAGCTCCAGACTTCCAGAAATGACATaGGAACAATGGGAGGGGGTG | + |
|
Preference number: 2 (lower is better) Translates to: VSTTRSRGYVSQVSLSSRLPEMT*EQWEGV Trigger: CACCCCCTCCCATTGTTCTCATGTCATTTCTGGAAG...TCTGGAGCTCAGGGAGACTTGGCTCACATACCCCCTGCTTCTGGTGGTAGAGAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000043437.14 |
||
| 3UTR-3UTR CCA 90 bp | GCTCCAGATCAGGTAATCTCACCCTCCTGCCCTCTATCTAAACTACTCAAGCCCAGCCGTGCAAGGCTTTaGGAGATGGGTTCCAGCCCA | + |
|
Preference number: 2 (lower is better) Translates to: APDQVISPSCPLSKLLKPSRARL*EMGSSP Trigger: TGGGCTGGAACCCATCTCCCAAAGCCTTGCACGGCT...GGGCTTGAGTAGTTTAGATAGAGGGCAGGAGGGTGAGATTACCTGATCTGGAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043437.14 |
||
| 3UTR-3UTR CCA 90 bp | TGTGTGGGGAGCGGGCACAGGTTCCTCCAGGAGATACAATACAATGCCTGGAGAAGTTGCTCTGCATCCTaGCTCCAGCTCCTTCTGACT | + |
|
Preference number: 2 (lower is better) Translates to: CVGSGHRFLQEIQYNAWRSCSAS*LQLLLT Trigger: AGTCAGAAGGAGCTGGAGCCAGGATGCAGAGCAACT...TCTCCAGGCATTGTATTGTATCTCCTGGAGGAACCTGTGCCCGCTCCCCACACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043437.14 |
||
| 3UTR-3UTR CCA 90 bp | GTCTCTACCACCAGAAGCAGGGGGTATGTGAGCCAAGTCTCCCTGAGCTCCAGACAACTCCCTGAATCCTaGAGGTGGGTGAACTGTAAG | + |
|
Preference number: 2 (lower is better) Translates to: VSTTRSRGYVSQVSLSSRQLPES*RWVNCK Trigger: CTTACAGTTCACCCACCTCCAGGATTCAGGGAGTTG...TCTGGAGCTCAGGGAGACTTGGCTCACATACCCCCTGCTTCTGGTGGTAGAGAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043437.14 |
||
| 3UTR-3UTR TCA 90 bp | CCAATTCTTTCCTCTGAATTTCCTCTAGGCAACTACAGCAGGGGTCAGGTGGCAGGCTCCAGCTCCTTCTaGCTTCCAAGGTCTGCTCCT | + |
|
Preference number: 2 (lower is better) Translates to: PILSSEFPLGNYSRGQVAGSSSF*LPRSAP Trigger: AGGAGCAGACCTTGGAAGTCAGAAGGAGCTGGAGCC...TGCCACCTGACCCCTGCTGTAGTTGCCTAGAGGAAATTCAGAGGAAAGAATTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043437.14 |
||
| 3UTR-3UTR CCA 90 bp | CCACTGGACAGCTCTGCCCCTCAGTTGAGGGACCAACTCTACTTCCATCTGGAGTCCAAATCCCAGAAATaGGAACAGGGTAAGTCTCCA | + |
|
Preference number: 2 (lower is better) Translates to: PLDSSAPQLRDQLYFHLESKSQK*EQGKSP Trigger: TGGAGACTTACCCTGTTCCCATTTCTGGGATTTGGA...CTCCAGATGGAAGTAGAGTTGGTCCCTCAACTGAGGGGCAGAGCTGTCCAGTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043437.14 |
||
| 3UTR-3UTR CCA 90 bp | GCTCCAGATCAGGTAATCTCACCCTCCTGCCCTCTATCTAAACTACTCAAGCCCGCCCAGGCCCTGGCTTaGACTTCATACCCTTTATTC | + |
|
Preference number: 2 (lower is better) Translates to: APDQVISPSCPLSKLLKPAQALA*TSYPLF Trigger: GAATAAAGGGTATGAAGTCCAAGCCAGGGCCTGGGC...GGGCTTGAGTAGTTTAGATAGAGGGCAGGAGGGTGAGATTACCTGATCTGGAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043437.14 |
||
| 3UTR CAA 90 bp | GACATCGAGAAAGATTGCAGCTTTTGCCTATGTCACTCCAGACCATaGAAGGGGTGGTTTCTGTCAGCGTGGAGACAGGGACAGCAGCAT | + |
|
Preference number: 2 (lower is better) Translates to: DIEKDCSFCLCHSRP*KGWFLSAWRQGQQH Trigger: ATGCTGCTGTCCCTGTCTCCACGCTGACAGAAACCACCCCTTCAATGGTCTGGAGTGACATAGGCAAAAGCTGCAATCTTTCTCGATGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043437.14 |
||
| 3UTR-3UTR TCA 90 bp | CTCAGGAGTCTCTACCACCAGAAGCAGGGGGTATGTGAGCCAAGTCTCCCTGAGACCTTAGATATGGGGTaGTGGCAAGAAGTCAAAAGA | + |
|
Preference number: 2 (lower is better) Translates to: LRSLYHQKQGVCEPSLPETLDMG*WQEVKR Trigger: TCTTTTGACTTCTTGCCATCACCCCATATCTAAGGT...CTCAGGGAGACTTGGCTCACATACCCCCTGCTTCTGGTGGTAGAGACTCCTGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000043437.14 |
||
| 3UTR CAA 90 bp | ACAGGTTCCTCCAGGAGATACAATACAATGCCTGGAGAACAGAGCTaGACTAGGCAACAACACTGCTTCCCTTCCTTTCTTCCAAGCCTC | + |
|
Preference number: 2 (lower is better) Translates to: TGSSRRYNTMPGEQS*TRQQHCFPSFLPSL Trigger: GAGGCTTGGAAGAAAGGAAGGGAAGCAGTGTTGTTGCCTAGTCAAGCTCTGTTCTCCAGGCATTGTATTGTATCTCCTGGAGGAACCTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043437.14 |
||
| 3UTR CAA 90 bp | CATACCCTTTATTCACTGTCAATAAATCCGCTCAGACCATTACAGTaGCTCTGCATCCTGGCTCCAGCTCCTTCTGACTTCCAAGGTCTG | + |
|
Preference number: 2 (lower is better) Translates to: HTLYSLSINPLRPLQ*LCILAPAPSDFQGL Trigger: CAGACCTTGGAAGTCAGAAGGAGCTGGAGCCAGGATGCAGAGCAACTGTAATGGTCTGAGCGGATTTATTGACAGTGAATAAAGGGTATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043437.14 |
||
| 3UTR-3UTR GCA 90 bp | CCAATTCTTTCCTCTGAATTTCCTCTAGGCAACTACAGCAGGGGTCAGGTGGCAAAAGATTGCAGCTTTTaGCTATGTCACTCCAGACCA | + |
|
Preference number: 2 (lower is better) Translates to: PILSSEFPLGNYSRGQVAKDCSF*LCHSRP Trigger: TGGTCTGGAGTGACATAGGCAAAAGCTGCAATCTTT...TGCCACCTGACCCCTGCTGTAGTTGCCTAGAGGAAATTCAGAGGAAAGAATTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000043437.14 |
||
| 3UTR CAA 90 bp | ATTTATTACAGGCAAAGGGATGTTGAGACCTGGGGAAGGTGGGGTTaGAGGAAGTCTGAAGAGCATATTGAAAGAACAGGACGAAAGAGC | + |
|
Preference number: 2 (lower is better) Translates to: IYYRQRDVETWGRWG*RKSEEHIERTGRKS Trigger: GCTCTTTCGTCCTGTTCTTTCAATATGCTCTTCAGACTTCCTCAAACCCCACCTTCCCCAGGTCTCAACATCCCTTTGCCTGTAATAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043437.14 |
||
| 3UTR GCA 72 bp | GGCAGCCTAGGACAGGGACAGCTGCCATTGAGAGGCTaGTCCCTGAGCCGCCACCCTCCCAGGCCGCAGCCA | + |
|
Preference number: 3 (lower is better) Translates to: GSLGQGQLPLRG*SLSRHPPRPQP Trigger: TGGCTGCGGCCTGGGAGGGTGGCGGCTCAGGGAGCAGCCTCTCAATGGCAGCTGTCCCTGTCCTAGGCTGCC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043437.14 |
||
| 3UTR GCA 72 bp | AGCCGCCACCCTCCCAGGCCGCAGCCACCCACTCAGTaGAGAACGGAAGACTCCAGGATGCCAGCCTCGTCC | + |
|
Preference number: 3 (lower is better) Translates to: SRHPPRPQPPTQ*RTEDSRMPASS Trigger: GGACGAGGCTGGCATCCTGGAGTCTTCCGTTCTGCACTGAGTGGGTGGCTGCGGCCTGGGAGGGTGGCGGCT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043437.14 |
||
| 3UTR-3UTR CAA 90 bp | ACATGGTCCCCGGCTGAGAGCCCTCAGGAGGAGCCCCTCCCAATTCCCAGCCCCGCATTCAGGGTGGGGTaGACCACAGAGGCAGGGGGA | + |
|
Preference number: 3 (lower is better) Translates to: TWSPAESPQEEPLPIPSPAFRVG*TTEAGG Trigger: TCCCCCTGCCTCTGTGGTCAACCCCACCCTGAATGC...GGGGCTGGGAATTGGGAGGGGCTCCTCCTGAGGGCTCTCAGCCGGGGACCATGT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt. Matches the following 1 transcripts: ENSMUST00000043437.14 |
||
| 3UTR CCA 72 bp | AGGTCGCGATATCGGTCAGACGCCTGGAGTCTGGTTTaGCCTCCAGCCACAGTGGCATCCAGAAGGCAGCGC | + |
|
Preference number: 3 (lower is better) Translates to: RSRYRSDAWSLV*PPATVASRRQR Trigger: GCGCTGCCTTCTGGATGCCACTGTGGCTGGAGGCCAAACCAGACTCCAGGCGTCTGACCGATATCGCGACCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164222.2 |
||
| 3UTR-3UTR CAA 90 bp | CTTCACTGTGCTGATGGGTTACCAGCAGGCATTGCCAGGGGACGGATAGCCAGGGAGCCGTGCAAGGCTTaGGGAGATGGGTTCCAGCCC | + |
|
Preference number: 3 (lower is better) Translates to: LHCADGLPAGIARGRIAREPCKA*GDGFQP Trigger: GGGCTGGAACCCATCTCCCAAAGCCTTGCACGGCTC...CCTGGCTATCCGTCCCCTGGCAATGCCTGCTGGTAACCCATCAGCACAGTGAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043437.14 |
||
| 3UTR TCA 72 bp | GTGGGGTTGACCACAGAGGCAGGGGGAAGACGGAGATaGGCCAGAGCCGTGCAAGGCTTTGGGAGATGGGTT | + |
|
Preference number: 3 (lower is better) Translates to: VGLTTEAGGRRR*ARAVQGFGRWV Trigger: AACCCATCTCCCAAAGCCTTGCACGGCTCTGGCTCATCTCCGTCTTCCCCCTGCCTCTGTGGTCAACCCCAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043437.14 |
||
| 3UTR GCA 72 bp | CATCCAGAAGGCAGCGCCAGGCACCAAACACTGTCCTaGTGTCTGCCTCTCCACTCCGCTGCCCTTCTCTCT | + |
|
Preference number: 3 (lower is better) Translates to: HPEGSARHQTLS*CLPLHSAALLS Trigger: AGAGAGAAGGGCAGCGGAGTGGAGAGGCAGACAGCAGGACAGTGTTTGGTGCCTGGCGCTGCCTTCTGGATG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164222.2 |
||
| 3UTR-3UTR CAA 90 bp | ACTGCAGCCGCAGCAAGAGGCCCCCACTTGTCCGTCAGGGTCGCTCTAAGGAAGTCTGCAGAACTGAACTaGGGCCCTAGAGGGAGAGAC | + |
|
Preference number: 3 (lower is better) Translates to: TAAAARGPHLSVRVALRKSAELN*GPRGRD Trigger: GTCTCTCCCTCTAGGGCCCAAGTTCAGTTCTGCAGA...CTTCCTTAGAGCGACCCTGACGGACAAGTGGGGGCCTCTTGCTGCGGCTGCAGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043437.14 |
||
| 3UTR CCA 72 bp | GTTGAGGGACCAACTCTACTTCCATCTGGAGATACATaGTCCCCGGCTGAGAGCCCTCAGGAGGAGCCCCTC | + |
|
Preference number: 3 (lower is better) Translates to: VEGPTLLPSGDT*SPAESPQEEPL Trigger: GAGGGGCTCCTCCTGAGGGCTCTCAGCCGGGGACCATGTATCTCCAGATGGAAGTAGAGTTGGTCCCTCAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043437.14 |
||
| 3UTR TCA 72 bp | AAGACTCCAGGATGCCAGCCTCGTCCCTTGTACACTTaGGGGGACCCCTGGAACCTCTGCAGAACTGAACTT | + |
|
Preference number: 3 (lower is better) Translates to: KTPGCQPRPLYT*GDPWNLCRTEL Trigger: AAGTTCAGTTCTGCAGAGGTTCCAGGGGTCCCCTCAAGTGTACAAGGGACGAGGCTGGCATCCTGGAGTCTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043437.14 |
||
| 3UTR CCA 72 bp | TGGGAGGGGGTGATGCATGGGTCCAAATCCCAGAAATaGGAACAGGGTAAGTCTCCACCCATGGAGGTGAGA | + |
|
Preference number: 3 (lower is better) Translates to: WEGVMHGSKSQK*EQGKSPPMEVR Trigger: TCTCACCTCCATGGGTGGAGACTTACCCTGTTCCCATTTCTGGGATTTGGACCCATGCATCACCCCCTCCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043437.14 |
||
| 3UTR CCA 72 bp | GGCCCCCTGCCATCTTGGCACAAGAGGCCCAGGCCCTaGCTTGGACTTCATACCCTTTATTCACTGTCAATA | + |
|
Preference number: 3 (lower is better) Translates to: GPLPSWHKRPRP*LGLHTLYSLSI Trigger: TATTGACAGTGAATAAAGGGTATGAAGTCCAAGCCAGGGCCTGGGCCTCTTGTGCCAAGATGGCAGGGGGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043437.14 |
||
| 3UTR-3UTR CAA 90 bp | GAGCGGGCACAGGTTCCTCCAGGAGATACAATACAATGCCTGGAGAACAGAGCTGGCCCAGGCCCTGGCTaGGACTTCATACCCTTTATT | + |
|
Preference number: 3 (lower is better) Translates to: ERAQVPPGDTIQCLENRAGPGPG*DFIPFI Trigger: AATAAAGGGTATGAAGTCCAAGCCAGGGCCTGGGCC...AGCTCTGTTCTCCAGGCATTGTATTGTATCTCCTGGAGGAACCTGTGCCCGCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043437.14 |
||
| 3UTR TCA 72 bp | TTCAGGAATGGCCCAGCCAGCTTCTGGAGGGCCTGGTaGGAAAAACCATCCCGCGTGGAGATCCTTTATGAA | + |
|
Preference number: 3 (lower is better) Translates to: FRNGPASFWRAW*EKPSRVEILYE Trigger: TTCATAAAGGATCTCCACGCGGGATGGTTTTTCTCACCAGGCCCTCCAGAAGCTGGCTGGGCCATTCCTGAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000164222.2 |
||
| 3UTR TCA 72 bp | CAAGGTCAAACCCAGGGAGGGACGTTTAGGAGCCTCTaGGCTGTAAGCCTGAGTTGCAACATTCTCTTCCCA | + |
|
Preference number: 3 (lower is better) Translates to: QGQTQGGTFRSL*AVSLSCNILFP Trigger: TGGGAAGAGAATGTTGCAACTCAGGCTTACAGCTCAGAGGCTCCTAAACGTCCCTCCCTGGGTTTGACCTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043437.14 |
||
| 3UTR-3UTR CAA 90 bp | CCACTGGACAGCTCTGCCCCTCAGTTGAGGGACCAACTCTACTTCCATCTGGAGGGACATCGAGAAAGATaGCAGCTTTTGCCTATGTCA | + |
|
Preference number: 3 (lower is better) Translates to: PLDSSAPQLRDQLYFHLEGHRER*QLLPMS Trigger: TGACATAGGCAAAAGCTGCAATCTTTCTCGATGTCC...CTCCAGATGGAAGTAGAGTTGGTCCCTCAACTGAGGGGCAGAGCTGTCCAGTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043437.14 |
||
| 3UTR-3UTR CAA 90 bp | CCAATTCTTTCCTCTGAATTTCCTCTAGGCAACTACAGCAGGGGTCAGGTGGCACTCAGACCATTACAGTaGCTCTGCATCCTGGCTCCA | + |
|
Preference number: 3 (lower is better) Translates to: PILSSEFPLGNYSRGQVALRPLQ*LCILAP Trigger: TGGAGCCAGGATGCAGAGCAACTGTAATGGTCTGAG...TGCCACCTGACCCCTGCTGTAGTTGCCTAGAGGAAATTCAGAGGAAAGAATTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043437.14 |
||
| 3UTR TCA 72 bp | AAGATTGCAGCTTTTGCCTATGTCACTCCAGACCATTaGAGGGGTGGTTTCTGTCAGCGTGGAGACAGGGAC | + |
|
Preference number: 3 (lower is better) Translates to: KIAAFAYVTPDH*RGGFCQRGDRD Trigger: GTCCCTGTCTCCACGCTGACAGAAACCACCCCTTCAATGGTCTGGAGTGACATAGGCAAAAGCTGCAATCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043437.14 |
||
| 3UTR CCA 72 bp | CCTGCCATCTTGGCACAAGAGGCCCAGGCCCTGGCTTaGACTTCATACCCTTTATTCACTGTCAATAAATCC | + |
|
Preference number: 3 (lower is better) Translates to: PAILAQEAQALA*TSYPLFTVNKS Trigger: GGATTTATTGACAGTGAATAAAGGGTATGAAGTCCAAGCCAGGGCCTGGGCCTCTTGTGCCAAGATGGCAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043437.14 |
||
| 3UTR TCA 72 bp | AGAAATGGGAACAGGGTAAGTCTCCACCCATGGAGGTaGGAACGGACATCGAGAAAGATTGCAGCTTTTGCC | + |
|
Preference number: 3 (lower is better) Translates to: RNGNRVSLHPWR*ERTSRKIAAFA Trigger: GGCAAAAGCTGCAATCTTTCTCGATGTCCGTTCTCACCTCCATGGGTGGAGACTTACCCTGTTCCCATTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043437.14 |
||
| 3UTR GCA 72 bp | CTGTCAATAAATCCGCTCAGACCATTACAGTTGCTCTaGATCCTGGCTCCAGCTCCTTCTGACTTCCAAGGT | + |
|
Preference number: 3 (lower is better) Translates to: LSINPLRPLQLL*ILAPAPSDFQG Trigger: ACCTTGGAAGTCAGAAGGAGCTGGAGCCAGGATGCAGAGCAACTGTAATGGTCTGAGCGGATTTATTGACAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043437.14 |
||
| 3UTR CCA 72 bp | TGTCTAGTCAAGAAGCAAATGGACAGCCAACCAAACTaGACACCTCAGGTCAGCAGGTATGAAGACATGCCC | + |
|
Preference number: 3 (lower is better) Translates to: CLVKKQMDSQPN*TPQVSRYEDMP Trigger: GGGCATGTCTTCATACCTGCTGACCTGAGGTGTCCAGTTTGGTTGGCTGTCCATTTGCTTCTTGACTAGACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043437.14 |
||
| 3UTR TCA 72 bp | CCAGGAGATACAATACAATGCCTGGAGAACAGAGCTTaGCTAGGCAACAACACTGCTTCCCTTCCTTTCTTC | + |
|
Preference number: 3 (lower is better) Translates to: PGDTIQCLENRA*LGNNTASLPFF Trigger: GAAGAAAGGAAGGGAAGCAGTGTTGTTGCCTAGTCAAGCTCTGTTCTCCAGGCATTGTATTGTATCTCCTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043437.14 |
||
| CDS-3UTR CCA 90 bp | ACTGCAGCCGCAGCAAGAGGCCCCCACTTGTCCGTCAGGGTCGCTCTAAGGAAGCGGGGCTTTGGCTGGTaGGGGAGGTGGTGGACGCAT | + |
|
Preference number: 4 (lower is better) Translates to: TAAAARGPHLSVRVALRKRGFGW*GRWWTH Trigger: ATGCGTCCACCACCTCCCCCACCAGCCAAAGCCCCG...CTTCCTTAGAGCGACCCTGACGGACAAGTGGGGGCCTCTTGCTGCGGCTGCAGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000043437.14 |
||
| CDS-3UTR TCA 90 bp | AGGCCCCCTGCCATCTTGGCACAAGAGGCCCAGGCCCTGGCTTGGACTTCATACCTCTGCTGCCGGGTCTaGAGGATGCTCAGCTGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: RPPAILAQEAQALAWTSYLCCRV*RMLSCS Trigger: GGAGCAGCTGAGCATCCTTCAGACCCGGCAGCAGAG...GTATGAAGTCCAAGCCAGGGCCTGGGCCTCTTGTGCCAAGATGGCAGGGGGCCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043437.14 |
||
| CDS-3UTR GCA 90 bp | ACATGGTCCCCGGCTGAGAGCCCTCAGGAGGAGCCCCTCCCAATTCCCAGCCCCCTGAGGGATTGTCGATaGCATGGCAGCTCTCAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: TWSPAESPQEEPLPIPSPLRDCR*HGSSQA Trigger: TGCCTGAGAGCTGCCATGGCATCGACAATCCCTCAG...GGGGCTGGGAATTGGGAGGGGCTCCTCCTGAGGGCTCTCAGCCGGGGACCATGT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000043437.14 |
||
| CDS-3UTR CCA 90 bp | CTTCACTGTGCTGATGGGTTACCAGCAGGCATTGCCAGGGGACGGATAGCCAGGGTCCGGGGCTTTGGCTaGTGGGGGAGGTGGTGGACG | + |
|
Preference number: 4 (lower is better) Translates to: LHCADGLPAGIARGRIARVRGFG*WGRWWT Trigger: CGTCCACCACCTCCCCCACCAGCCAAAGCCCCGGAC...CCTGGCTATCCGTCCCCTGGCAATGCCTGCTGGTAACCCATCAGCACAGTGAAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000043437.14 |
||
| CDS-3UTR CCA 90 bp | AGGCCCCCTGCCATCTTGGCACAAGAGGCCCAGGCCCTGGCTTGGACTTCATACGCCTGGAGTCTGGTTTaGCCTCCAGCCACAGTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: RPPAILAQEAQALAWTSYAWSLV*PPATVA Trigger: TGCCACTGTGGCTGGAGGCCAAACCAGACTCCAGGC...GTATGAAGTCCAAGCCAGGGCCTGGGCCTCTTGTGCCAAGATGGCAGGGGGCCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043437.14 |
||
| CDS-3UTR TCA 90 bp | TGTGCTGATGGGTTACCAGCAGGCATTGCCAGGGGACGGATAGCCAGGAAGGCTGTGAGAGGATCGGGATaGCCAGGGTCCGGGGCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: CADGLPAGIARGRIARKAVRGSG*PGSGAL Trigger: CAAAGCCCCGGACCCTGGTCATCCCGATCCTCTCAC...AGCCTTCCTGGCTATCCGTCCCCTGGCAATGCCTGCTGGTAACCCATCAGCACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043437.14 |
||
| CDS-3UTR GCA 90 bp | GGCCTCCAGCCACAGTGGCATCCAGAAGGCAGCGCCAGGCACCAAACACTGTCCGCCGGGTCTGAAGGATaGTCAGCTGCTCCAAAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: GLQPQWHPEGSARHQTLSAGSEG*SAAPKS Trigger: GCTTTTTGGAGCAGCTGAGCATCCTTCAGACCCGGC...GGACAGTGTTTGGTGCCTGGCGCTGCCTTCTGGATGCCACTGTGGCTGGAGGCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000164222.2 |
||
| CDS-3UTR GCA 90 bp | CTTCACTGTGCTGATGGGTTACCAGCAGGCATTGCCAGGGGACGGATAGCCAGGAGTCCCGGGCAGCCCTaGTTGTCCAGCGCTGAACCT | + |
|
Preference number: 4 (lower is better) Translates to: LHCADGLPAGIARGRIARSPGQP*LSSAEP Trigger: AGGTTCAGCGCTGGACAAGCAGGGCTGCCCGGGACT...CCTGGCTATCCGTCCCCTGGCAATGCCTGCTGGTAACCCATCAGCACAGTGAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043437.14 |
||
| CDS-3UTR CCA 90 bp | GTCTCTACCACCAGAAGCAGGGGGTATGTGAGCCAAGTCTCCCTGAGCTCCAGAGGCCTCCAGCCACAGTaGCATCCAGAAGGCAGCGCC | + |
|
Preference number: 4 (lower is better) Translates to: VSTTRSRGYVSQVSLSSRGLQPQ*HPEGSA Trigger: GGCGCTGCCTTCTGGATGCCACTGTGGCTGGAGGCC...TCTGGAGCTCAGGGAGACTTGGCTCACATACCCCCTGCTTCTGGTGGTAGAGAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043437.14 |
||
| CDS-3UTR CCA 90 bp | TGTGCTGATGGGTTACCAGCAGGCATTGCCAGGGGACGGATAGCCAGGAAGGCTCAGCATCCTCAGCCGTaGGAGAGAGGTCCCTCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: CADGLPAGIARGRIARKAQHPQP*ERGPSG Trigger: CCCAGAGGGACCTCTCTCCCACGGCTGAGGATGCTG...AGCCTTCCTGGCTATCCGTCCCCTGGCAATGCCTGCTGGTAACCCATCAGCACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043437.14 |
||
| CDS-3UTR CCA 90 bp | GTCTCTACCACCAGAAGCAGGGGGTATGTGAGCCAAGTCTCCCTGAGCTCCAGAGTCAGAGAGCTCAGGTaGCCCCGGGGGACCAAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: VSTTRSRGYVSQVSLSSRVRELR*PRGTKQ Trigger: CTGCTTGGTCCCCCGGGGCCACCTGAGCTCTCTGAC...TCTGGAGCTCAGGGAGACTTGGCTCACATACCCCCTGCTTCTGGTGGTAGAGAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000043437.14 |
||
| CDS-3UTR CCA 90 bp | CTTCACTGTGCTGATGGGTTACCAGCAGGCATTGCCAGGGGACGGATAGCCAGGTGGTGGGGGAGGTGGTaGACGCATCGGCCTAAGTCG | + |
|
Preference number: 4 (lower is better) Translates to: LHCADGLPAGIARGRIARWWGRW*THRPKS Trigger: CGACTTAGGCCGATGCGTCCACCACCTCCCCCACCA...CCTGGCTATCCGTCCCCTGGCAATGCCTGCTGGTAACCCATCAGCACAGTGAAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043437.14 |
||
| CDS-3UTR CCA 90 bp | CCACTGGACAGCTCTGCCCCTCAGTTGAGGGACCAACTCTACTTCCATCTGGAGGGCTGGTGGGGGAGGTaGTGGACGCATCGGCCTAAG | + |
|
Preference number: 4 (lower is better) Translates to: PLDSSAPQLRDQLYFHLEGWWGR*WTHRPK Trigger: CTTAGGCCGATGCGTCCACCACCTCCCCCACCAGCC...CTCCAGATGGAAGTAGAGTTGGTCCCTCAACTGAGGGGCAGAGCTGTCCAGTGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043437.14 |
||
| CDS-3UTR TCA 90 bp | CAGCCAGCTTCTGGAGGGCCTGGTGAGAAAAACCATCCCGCGTGGAGATCCTTTCTCTGCTGCCGGGTCTaGAGGATGCTCAGCTGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: QPASGGPGEKNHPAWRSFLCCRV*RMLSCS Trigger: GGAGCAGCTGAGCATCCTTCAGACCCGGCAGCAGAG...AAAGGATCTCCACGCGGGATGGTTTTTCTCACCAGGCCCTCCAGAAGCTGGCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000164222.2 |
||
| CDS-3UTR TCA 90 bp | CCCCTGCCATCTTGGCACAAGAGGCCCAGGCCCTGGCTTGGACTTCATACCCTTGCCACTCACCCTCTGTaGTGGTCAGCTCATCCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: PLPSWHKRPRPWLGLHTLATHPL*WSAHPH Trigger: GTGAGGATGAGCTGACCATCACAGAGGGTGAGTGGC...AAGGGTATGAAGTCCAAGCCAGGGCCTGGGCCTCTTGTGCCAAGATGGCAGGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043437.14 |
||
| CDS-3UTR TCA 90 bp | CCAGCCCCTCATTCTGTTCCCTTTCCCCACCTGCCAACAGGTTGCCTGGCCTGCCATCTCCTTCCTCTATaGCCTCCAGCCACTCACCCT | + |
|
Preference number: 4 (lower is better) Translates to: PAPHSVPFPHLPTGCLACHLLPL*PPATHP Trigger: AGGGTGAGTGGCTGGAGGTCATAGAGGAAGGAGATG...GCAGGCCAGGCAACCTGTTGGCAGGTGGGGAAAGGGAACAGAATGAGGGGCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043437.14 |
||
| CDS-3UTR TCA 90 bp | CTTCACTGTGCTGATGGGTTACCAGCAGGCATTGCCAGGGGACGGATAGCCAGGTGGGCAACAGGCGGATaGGTGCCCCTTCAGGGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: LHCADGLPAGIARGRIARWATGG*VPLQGN Trigger: GTTTCCCTGAAGGGGCACTCATCCGCCTGTTGCCCA...CCTGGCTATCCGTCCCCTGGCAATGCCTGCTGGTAACCCATCAGCACAGTGAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043437.14 |
||
| CDS-3UTR GCA 90 bp | CCAGCCCCTCATTCTGTTCCCTTTCCCCACCTGCCAACAGGTTGCCTGGCCTGCGCCTCTCCACTCCGCTaGCCTTCTCTCTTCAGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: PAPHSVPFPHLPTGCLACASPLR*PSLFRN Trigger: ATTCCTGAAGAGAGAAGGGCAGCGGAGTGGAGAGGC...GCAGGCCAGGCAACCTGTTGGCAGGTGGGGAAAGGGAACAGAATGAGGGGCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043437.14 |
||
| CDS-3UTR GCA 90 bp | CTTCACTGTGCTGATGGGTTACCAGCAGGCATTGCCAGGGGACGGATAGCCAGGCGGGCTGCTCTCAGCTaGTGGGAATACTGGGCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: LHCADGLPAGIARGRIARRAALS*WEYWAD Trigger: GTCAGCCCAGTATTCCCAGCAGCTGAGAGCAGCCCG...CCTGGCTATCCGTCCCCTGGCAATGCCTGCTGGTAACCCATCAGCACAGTGAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043437.14 |
||
| CDS-3UTR CCA 90 bp | ACATGGTCCCCGGCTGAGAGCCCTCAGGAGGAGCCCCTCCCAATTCCCAGCCCCGACCTTGAGCAGTGCTaGCAATTCCTCTTGGTAGTA | + |
|
Preference number: 4 (lower is better) Translates to: TWSPAESPQEEPLPIPSPDLEQC*QFLLVV Trigger: TACTACCAAGAGGAATTGCCAGCACTGCTCAAGGTC...GGGGCTGGGAATTGGGAGGGGCTCCTCCTGAGGGCTCTCAGCCGGGGACCATGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000043437.14 |
||
| 3UTR CAA 72 bp | CTTGCATCCACTGCAGCCGCAGCAAGAGGCCCCCACTaGTCCGTCAGGGTCGCTCTAAGGAAGGAAAAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: LASTAAAARGPH*SVRVALRKEKA Trigger: GGCTTTTTCCTTCCTTAGAGCGACCCTGACGGACAAGTGGGGGCCTCTTGCTGCGGCTGCAGTGGATGCAAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000043437.14 |
||
| CDS-3UTR TCA 90 bp | GGCCTCCAGCCACAGTGGCATCCAGAAGGCAGCGCCAGGCACCAAACACTGTCCGCTTGCTGTAAGATCTaGTGTCCTCCAGTAGATCCG | + |
|
Preference number: 4 (lower is better) Translates to: GLQPQWHPEGSARHQTLSACCKI*CPPVDP Trigger: CGGATCTACTGGAGGACATCAGATCTTACAGCAAGC...GGACAGTGTTTGGTGCCTGGCGCTGCCTTCTGGATGCCACTGTGGCTGGAGGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164222.2 |
||
| CDS-3UTR CCA 90 bp | ATGGCCCAGCCAGCTTCTGGAGGGCCTGGTGAGAAAAACCATCCCGCGTGGAGATTTAACCTCCTGGGCTaGCTTCACTTTTCGGGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: MAQPASGGPGEKNHPAWRFNLLG*LHFSGR Trigger: CCGCCCCGAAAAGTGAAGCCAGCCCAGGAGGTTAAA...TCTCCACGCGGGATGGTTTTTCTCACCAGGCCCTCCAGAAGCTGGCTGGGCCAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000164222.2 |
||
| CDS-3UTR CCA 90 bp | CCACTGGACAGCTCTGCCCCTCAGTTGAGGGACCAACTCTACTTCCATCTGGAGTCAGCTGCCTTCTCCTaGGCCAAGGCCCATACACGC | + |
|
Preference number: 4 (lower is better) Translates to: PLDSSAPQLRDQLYFHLESAAFS*AKAHTR Trigger: GCGTGTATGGGCCTTGGCCCAGGAGAAGGCAGCTGA...CTCCAGATGGAAGTAGAGTTGGTCCCTCAACTGAGGGGCAGAGCTGTCCAGTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043437.14 |
||
| CDS-3UTR CCA 90 bp | TCAGACCATTACAGTTGCTCTGCATCCTGGCTCCAGCTCCTTCTGACTTCCAAGGCGGCCCCTTTCACCTaGCTCACCTGTGCCCGTCGG | + |
|
Preference number: 4 (lower is better) Translates to: SDHYSCSASWLQLLLTSKAAPFT*LTCARR Trigger: CCGACGGGCACAGGTGAGCCAGGTGAAAGGGGCCGC...CTTGGAAGTCAGAAGGAGCTGGAGCCAGGATGCAGAGCAACTGTAATGGTCTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043437.14 |
||
| CDS-3UTR CCA 90 bp | CTTCACTGTGCTGATGGGTTACCAGCAGGCATTGCCAGGGGACGGATAGCCAGGTGTTCCACCTCATCCTaGGCTTGGGTCATGGCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: LHCADGLPAGIARGRIARCSTSS*AWVMAG Trigger: GCCAGCCATGACCCAAGCCCAGGATGAGGTGGAACA...CCTGGCTATCCGTCCCCTGGCAATGCCTGCTGGTAACCCATCAGCACAGTGAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043437.14 |
||
| CDS-3UTR TCA 90 bp | CCACTGGACAGCTCTGCCCCTCAGTTGAGGGACCAACTCTACTTCCATCTGGAGCTGGGAATACTGGGCTaGCTGGGCAGACAGCTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: PLDSSAPQLRDQLYFHLELGILG*LGRQLG Trigger: ACCAAGCTGTCTGCCCAGTCAGCCCAGTATTCCCAG...CTCCAGATGGAAGTAGAGTTGGTCCCTCAACTGAGGGGCAGAGCTGTCCAGTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043437.14 |
||
| CDS-3UTR GCA 90 bp | ACCATTGAAGGGGTGGTTTCTGTCAGCGTGGAGACAGGGACAGCAGCATCACTGTACCTGATCAGCCCCTaGCGGCTGGAACTGCTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: TIEGVVSVSVETGTAASLYLISP*RLELLR Trigger: CCTCAGCAGTTCCAGCCGGCAGGGGCTGATCAGGTA...CAGTGATGCTGCTGTCCCTGTCTCCACGCTGACAGAAACCACCCCTTCAATGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043437.14 |
||
| CDS-3UTR CCA 90 bp | GGAATGGCCCAGCCAGCTTCTGGAGGGCCTGGTGAGAAAAACCATCCCGCGTGGCATACTCCCGTTCAATaGCTGCCCTTTGCTTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: GMAQPASGGPGEKNHPAWHTPVQ*LPFACC Trigger: ACAGCAAGCAAAGGGCAGCCATTGAACGGGAGTATG...CCACGCGGGATGGTTTTTCTCACCAGGCCCTCCAGAAGCTGGCTGGGCCATTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000164222.2 |
||
| CDS-3UTR CCA 90 bp | GCTCCAGATCAGGTAATCTCACCCTCCTGCCCTCTATCTAAACTACTCAAGCCCGGCCCAGCCAGCTTCTaGAGGGCCTGGCCATACTCC | + |
|
Preference number: 4 (lower is better) Translates to: APDQVISPSCPLSKLLKPGPASF*RAWPYS Trigger: GGAGTATGGCCAGGCCCTCCAGAAGCTGGCTGGGCC...GGGCTTGAGTAGTTTAGATAGAGGGCAGGAGGGTGAGATTACCTGATCTGGAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043437.14 |
||
| CDS-3UTR CCA 90 bp | ACTGCAGCCGCAGCAAGAGGCCCCCACTTGTCCGTCAGGGTCGCTCTAAGGAAGGAATGGAAGATCCCATaGTCACTTCGGTTCAGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: TAAAARGPHLSVRVALRKEWKIP*SLRFSL Trigger: CAGGCTGAACCGAAGTGACCATGGGATCTTCCATTC...CTTCCTTAGAGCGACCCTGACGGACAAGTGGGGGCCTCTTGCTGCGGCTGCAGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043437.14 |
||
| CDS-3UTR CCA 90 bp | CCAGCCCCTCATTCTGTTCCCTTTCCCCACCTGCCAACAGGTTGCCTGGCCTGCTCAGTTTCTGGAGGCTaGTCCGAGAATGGAAGATCC | + |
|
Preference number: 4 (lower is better) Translates to: PAPHSVPFPHLPTGCLACSVSGG*SENGRS Trigger: GGATCTTCCATTCTCGGACCAGCCTCCAGAAACTGA...GCAGGCCAGGCAACCTGTTGGCAGGTGGGGAAAGGGAACAGAATGAGGGGCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043437.14 |
||
| CDS-3UTR CCA 90 bp | CCACTGGACAGCTCTGCCCCTCAGTTGAGGGACCAACTCTACTTCCATCTGGAGAGCTGCTGGGAATACTaGGCTGACTGGGCAGACAGC | + |
|
Preference number: 4 (lower is better) Translates to: PLDSSAPQLRDQLYFHLESCWEY*ADWADS Trigger: GCTGTCTGCCCAGTCAGCCCAGTATTCCCAGCAGCT...CTCCAGATGGAAGTAGAGTTGGTCCCTCAACTGAGGGGCAGAGCTGTCCAGTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043437.14 |
||
| CDS-3UTR CCA 90 bp | TCAATAAATCCGCTCAGACCATTACAGTTGCTCTGCATCCTGGCTCCAGCTCCTCAGGGTCCGGGGCTTTaGCTGGTGGGGGAGGTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: SINPLRPLQLLCILAPAPQGPGL*LVGEVV Trigger: CACCACCTCCCCCACCAGCCAAAGCCCCGGACCCTG...AGGAGCTGGAGCCAGGATGCAGAGCAACTGTAATGGTCTGAGCGGATTTATTGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043437.14 |
||
| CDS-3UTR TCA 90 bp | CTCAGTCTTCACTGTGCTGATGGGTTACCAGCAGGCATTGCCAGGGGACGGATACTGCTTGTCCAGCGCTaGACCTCTTTCTCCAGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LSLHCADGLPAGIARGRILLVQR*TSFSRP Trigger: TGGCCTGGAGAAAGAGGTTCAGCGCTGGACAAGCAG...TATCCGTCCCCTGGCAATGCCTGCTGGTAACCCATCAGCACAGTGAAGACTGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043437.14 |
||
| CDS-3UTR TCA 90 bp | GGGGTGATGGCAAGAAGTCAAAAGAGTACTTCCAGAAATGACATGAGAACAATGCGCCCCGGGGCCTGCTaGCGCCTCTGCTCCAGTCGC | + |
|
Preference number: 4 (lower is better) Translates to: GVMARSQKSTSRNDMRTMRPGAC*RLCSSR Trigger: GCGACTGGAGCAGAGGCGTCAGCAGGCCCCGGGGCG...CATTGTTCTCATGTCATTTCTGGAAGTACTCTTTTGACTTCTTGCCATCACCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000043437.14 |
||
| CDS-3UTR GCA 90 bp | TGGCCCAGCCAGCTTCTGGAGGGCCTGGTGAGAAAAACCATCCCGCGTGGAGATCTCCCGTTCAATGGCTaGCCTTTGCTTGCTGTAAGA | + |
|
Preference number: 4 (lower is better) Translates to: WPSQLLEGLVRKTIPRGDLPFNG*PLLAVR Trigger: TCTTACAGCAAGCAAAGGGCAGCCATTGAACGGGAG...ATCTCCACGCGGGATGGTTTTTCTCACCAGGCCCTCCAGAAGCTGGCTGGGCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000164222.2 |
||
| CDS-3UTR GCA 90 bp | TCAGACCATTACAGTTGCTCTGCATCCTGGCTCCAGCTCCTTCTGACTTCCAAGGGCCTGGACATCAGCTaGCTTCTCCTGGGCCAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: SDHYSCSASWLQLLLTSKGLDIS*LLLGQG Trigger: GCCTTGGCCCAGGAGAAGGCAGCTGATGTCCAGGCC...CTTGGAAGTCAGAAGGAGCTGGAGCCAGGATGCAGAGCAACTGTAATGGTCTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043437.14 |
||
| CDS-3UTR CCA 90 bp | CCACTGGACAGCTCTGCCCCTCAGTTGAGGGACCAACTCTACTTCCATCTGGAGTTTAACCTCCTGGGCTaGCTTCACTTTTCGGGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: PLDSSAPQLRDQLYFHLEFNLLG*LHFSGR Trigger: CCGCCCCGAAAAGTGAAGCCAGCCCAGGAGGTTAAA...CTCCAGATGGAAGTAGAGTTGGTCCCTCAACTGAGGGGCAGAGCTGTCCAGTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000043437.14 |
||
| CDS-3UTR CCA 90 bp | CTCAGTCTTCACTGTGCTGATGGGTTACCAGCAGGCATTGCCAGGGGACGGATATCAGCCTGTGCCTGCTaGAGGCTCTCTGTCCCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: LSLHCADGLPAGIARGRISACAC*RLSVPF Trigger: AAAGGGGACAGAGAGCCTCCAGCAGGCACAGGCTGA...TATCCGTCCCCTGGCAATGCCTGCTGGTAACCCATCAGCACAGTGAAGACTGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043437.14 |
||
| CDS-3UTR CCA 90 bp | CCAGCCCCTCATTCTGTTCCCTTTCCCCACCTGCCAACAGGTTGCCTGGCCTGCCAAGGTGAGCATTGGTaGCCACCAAATTTAGCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: PAPHSVPFPHLPTGCLACQGEHW*PPNLAG Trigger: ACCTGCTAAATTTGGTGGCCACCAATGCTCACCTTG...GCAGGCCAGGCAACCTGTTGGCAGGTGGGGAAAGGGAACAGAATGAGGGGCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043437.14 |
||
| CDS-3UTR CCA 90 bp | CCACTGGACAGCTCTGCCCCTCAGTTGAGGGACCAACTCTACTTCCATCTGGAGGGGAAGACTCCAACATaGCCCCCAAATTCTCCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: PLDSSAPQLRDQLYFHLEGKTPT*PPNSPL Trigger: GAGGGGAGAATTTGGGGGCCATGTTGGAGTCTTCCC...CTCCAGATGGAAGTAGAGTTGGTCCCTCAACTGAGGGGCAGAGCTGTCCAGTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000043437.14 |
||
| CDS-3UTR TCA 90 bp | CCACTGGACAGCTCTGCCCCTCAGTTGAGGGACCAACTCTACTTCCATCTGGAGCACTTACCAGGACCTTaGGCAGTGCTGGCAATTCCT | + |
|
Preference number: 4 (lower is better) Translates to: PLDSSAPQLRDQLYFHLEHLPGP*AVLAIP Trigger: AGGAATTGCCAGCACTGCTCAAGGTCCTGGTAAGTG...CTCCAGATGGAAGTAGAGTTGGTCCCTCAACTGAGGGGCAGAGCTGTCCAGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043437.14 |
||
| CDS-3UTR GCA 90 bp | TGTGTGGGGAGCGGGCACAGGTTCCTCCAGGAGATACAATACAATGCCTGGAGACCCTTTCTAAGCACCTaGTCCTTGGCGCTTCTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: CVGSGHRFLQEIQYNAWRPFLST*SLALLP Trigger: TGGGAGAAGCGCCAAGGAGCAGGTGCTTAGAAAGGG...TCTCCAGGCATTGTATTGTATCTCCTGGAGGAACCTGTGCCCGCTCCCCACACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043437.14 |
||
| CDS-3UTR CCA 90 bp | TGTGTGGGGAGCGGGCACAGGTTCCTCCAGGAGATACAATACAATGCCTGGAGATATCGGTCAGACGCCTaGAGTCTGGTTTGGCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: CVGSGHRFLQEIQYNAWRYRSDA*SLVWPP Trigger: TGGAGGCCAAACCAGACTCCAGGCGTCTGACCGATA...TCTCCAGGCATTGTATTGTATCTCCTGGAGGAACCTGTGCCCGCTCCCCACACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043437.14 |
||
| CDS-3UTR CCA 90 bp | CTCAGTCTTCACTGTGCTGATGGGTTACCAGCAGGCATTGCCAGGGGACGGATACTGGAACTGCTGAGGTaGGGTGGGAGAAAAGACTCC | + |
|
Preference number: 4 (lower is better) Translates to: LSLHCADGLPAGIARGRILELLR*GGRKDS Trigger: GGAGTCTTTTCTCCCACCCCACCTCAGCAGTTCCAG...TATCCGTCCCCTGGCAATGCCTGCTGGTAACCCATCAGCACAGTGAAGACTGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043437.14 |
||
| CDS-3UTR CCA 90 bp | ACCATTGAAGGGGTGGTTTCTGTCAGCGTGGAGACAGGGACAGCAGCATCACTGGGAGAGAGGTCCCTCTaGGACAGTCGAGCTTCACTA | + |
|
Preference number: 4 (lower is better) Translates to: TIEGVVSVSVETGTAASLGERSL*DSRASL Trigger: TAGTGAAGCTCGACTGTCCCAGAGGGACCTCTCTCC...CAGTGATGCTGCTGTCCCTGTCTCCACGCTGACAGAAACCACCCCTTCAATGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043437.14 |
||
| CDS-3UTR CCA 90 bp | CTCAGTCTTCACTGTGCTGATGGGTTACCAGCAGGCATTGCCAGGGGACGGATAGTGCCAAGAATGCTGTaGGCTCTCCTCCTGAGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: LSLHCADGLPAGIARGRIVPRML*ALLLRD Trigger: ATCCCTCAGGAGGAGAGCCCACAGCATTCTTGGCAC...TATCCGTCCCCTGGCAATGCCTGCTGGTAACCCATCAGCACAGTGAAGACTGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043437.14 |
||
| CDS-3UTR GCA 90 bp | TGTGTGGGGAGCGGGCACAGGTTCCTCCAGGAGATACAATACAATGCCTGGAGATTAGCAGGTACTCATTaGGGGCTGCTCTCAGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: CVGSGHRFLQEIQYNAWRLAGTH*GLLSAA Trigger: AGCAGCTGAGAGCAGCCCGCAATGAGTACCTGCTAA...TCTCCAGGCATTGTATTGTATCTCCTGGAGGAACCTGTGCCCGCTCCCCACACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043437.14 |
||
| CDS-3UTR CCA 90 bp | CCAATTCTTTCCTCTGAATTTCCTCTAGGCAACTACAGCAGGGGTCAGGTGGCACAGACGCCTGGAGTCTaGTTTGGCCTCCAGCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: PILSSEFPLGNYSRGQVAQTPGV*FGLQPQ Trigger: CTGTGGCTGGAGGCCAAACCAGACTCCAGGCGTCTG...TGCCACCTGACCCCTGCTGTAGTTGCCTAGAGGAAATTCAGAGGAAAGAATTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043437.14 |
||
| CDS-3UTR CCA 90 bp | GAGCGGGCACAGGTTCCTCCAGGAGATACAATACAATGCCTGGAGAACAGAGCTGAATACTGGGCTGACTaGGCAGACAGCTTGGTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: ERAQVPPGDTIQCLENRAEYWAD*ADSLVL Trigger: GAGCACCAAGCTGTCTGCCCAGTCAGCCCAGTATTC...AGCTCTGTTCTCCAGGCATTGTATTGTATCTCCTGGAGGAACCTGTGCCCGCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043437.14 |
||
| CDS-3UTR CCA 90 bp | TCAGACCATTACAGTTGCTCTGCATCCTGGCTCCAGCTCCTTCTGACTTCCAAGACCTCATCCTGGGCTTaGGTCATGGCTGGCTTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: SDHYSCSASWLQLLLTSKTSSWA*VMAGFS Trigger: GCTGAAGCCAGCCATGACCCAAGCCCAGGATGAGGT...CTTGGAAGTCAGAAGGAGCTGGAGCCAGGATGCAGAGCAACTGTAATGGTCTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043437.14 |
||
| CDS-3UTR CCA 90 bp | CCAATTCTTTCCTCTGAATTTCCTCTAGGCAACTACAGCAGGGGTCAGGTGGCATCTGGTAGCCAGGGCTaGTGGGGCAGGCTCCTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: PILSSEFPLGNYSRGQVASGSQG*WGRLLK Trigger: TTTGAGGAGCCTGCCCCACCAGCCCTGGCTACCAGA...TGCCACCTGACCCCTGCTGTAGTTGCCTAGAGGAAATTCAGAGGAAAGAATTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043437.14 |
||
| CDS-3UTR TCA 90 bp | ACCATTGAAGGGGTGGTTTCTGTCAGCGTGGAGACAGGGACAGCAGCATCACTGGCTTGCTGTAAGATCTaGTGTCCTCCAGTAGATCCG | + |
|
Preference number: 4 (lower is better) Translates to: TIEGVVSVSVETGTAASLACCKI*CPPVDP Trigger: CGGATCTACTGGAGGACATCAGATCTTACAGCAAGC...CAGTGATGCTGCTGTCCCTGTCTCCACGCTGACAGAAACCACCCCTTCAATGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043437.14 |
||
| CDS-3UTR GCA 90 bp | TGTGTGGGGAGCGGGCACAGGTTCCTCCAGGAGATACAATACAATGCCTGGAGACTCCCGTTCAATGGCTaGCCTTTGCTTGCTGTAAGA | + |
|
Preference number: 4 (lower is better) Translates to: CVGSGHRFLQEIQYNAWRLPFNG*PLLAVR Trigger: TCTTACAGCAAGCAAAGGGCAGCCATTGAACGGGAG...TCTCCAGGCATTGTATTGTATCTCCTGGAGGAACCTGTGCCCGCTCCCCACACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043437.14 |
||
| CDS-3UTR GCA 90 bp | GAGCGGGCACAGGTTCCTCCAGGAGATACAATACAATGCCTGGAGAACAGAGCTGTACTCATTGCGGGCTaGTCTCAGCTGCTGGGAATA | + |
|
Preference number: 4 (lower is better) Translates to: ERAQVPPGDTIQCLENRAVLIAG*SQLLGI Trigger: TATTCCCAGCAGCTGAGAGCAGCCCGCAATGAGTAC...AGCTCTGTTCTCCAGGCATTGTATTGTATCTCCTGGAGGAACCTGTGCCCGCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043437.14 |
||
| CDS-3UTR CCA 90 bp | CCAATTCTTTCCTCTGAATTTCCTCTAGGCAACTACAGCAGGGGTCAGGTGGCACACTTCGGTTCAGCCTaGCCTGGACATCAGCTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: PILSSEFPLGNYSRGQVAHFGSA*PGHQLP Trigger: AGGCAGCTGATGTCCAGGCCAGGCTGAACCGAAGTG...TGCCACCTGACCCCTGCTGTAGTTGCCTAGAGGAAATTCAGAGGAAAGAATTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043437.14 |
||
| CDS-3UTR CCA 90 bp | ATCTCACCCTCCTGCCCTCTATCTAAACTACTCAAGCCCATCAACTCCCTGAATGGCTTGGGTCATGGCTaGCTTCAGCCAGCGCTGTAC | + |
|
Preference number: 4 (lower is better) Translates to: ISPSCPLSKLLKPINSLNGLGHG*LQPALY Trigger: GTACAGCGCTGGCTGAAGCCAGCCATGACCCAAGCC...ATTCAGGGAGTTGATGGGCTTGAGTAGTTTAGATAGAGGGCAGGAGGGTGAGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043437.14 |
||
| CDS-3UTR CCA 90 bp | GAGCGGGCACAGGTTCCTCCAGGAGATACAATACAATGCCTGGAGAACAGAGCTCTCTACCAGGAGAGATaGGAAGACTCCAACATGGCC | + |
|
Preference number: 4 (lower is better) Translates to: ERAQVPPGDTIQCLENRALYQER*EDSNMA Trigger: GGCCATGTTGGAGTCTTCCCATCTCTCCTGGTAGAG...AGCTCTGTTCTCCAGGCATTGTATTGTATCTCCTGGAGGAACCTGTGCCCGCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043437.14 |
||
| CDS-3UTR GCA 90 bp | TCAATAAATCCGCTCAGACCATTACAGTTGCTCTGCATCCTGGCTCCAGCTCCTGCCGGGTCTGAAGGATaGTCAGCTGCTCCAAAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: SINPLRPLQLLCILAPAPAGSEG*SAAPKS Trigger: GCTTTTTGGAGCAGCTGAGCATCCTTCAGACCCGGC...AGGAGCTGGAGCCAGGATGCAGAGCAACTGTAATGGTCTGAGCGGATTTATTGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043437.14 |
||
| CDS-3UTR CCA 90 bp | GCTCCAGATCAGGTAATCTCACCCTCCTGCCCTCTATCTAAACTACTCAAGCCCTTGGTGCTCAGTTTCTaGAGGCTGGTCCGAGAATGG | + |
|
Preference number: 4 (lower is better) Translates to: APDQVISPSCPLSKLLKPLVLSF*RLVREW Trigger: CCATTCTCGGACCAGCCTCCAGAAACTGAGCACCAA...GGGCTTGAGTAGTTTAGATAGAGGGCAGGAGGGTGAGATTACCTGATCTGGAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043437.14 |
||
| CDS-3UTR CCA 90 bp | CCAATTCTTTCCTCTGAATTTCCTCTAGGCAACTACAGCAGGGGTCAGGTGGCAACTGGGCAGACAGCTTaGTGCTCAGTTTCTGGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: PILSSEFPLGNYSRGQVATGQTA*CSVSGG Trigger: GCCTCCAGAAACTGAGCACCAAGCTGTCTGCCCAGT...TGCCACCTGACCCCTGCTGTAGTTGCCTAGAGGAAATTCAGAGGAAAGAATTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043437.14 |
||
| CDS-3UTR GCA 90 bp | GGGGTGATGGCAAGAAGTCAAAAGAGTACTTCCAGAAATGACATGAGAACAATGGCCGAACACTACATGTaGAGGGCAGGGGAGGGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: GVMARSQKSTSRNDMRTMAEHYM*RAGEGS Trigger: AGACCCCTCCCCTGCCCTGCACATGTAGTGTTCGGC...CATTGTTCTCATGTCATTTCTGGAAGTACTCTTTTGACTTCTTGCCATCACCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000043437.14 |
||
| CDS-3UTR CCA 90 bp | TCAATAAATCCGCTCAGACCATTACAGTTGCTCTGCATCCTGGCTCCAGCTCCTAGGCTGGTCCGAGAATaGAAGATCCCATGGTCACTT | + |
|
Preference number: 4 (lower is better) Translates to: SINPLRPLQLLCILAPAPRLVRE*KIPWSL Trigger: AAGTGACCATGGGATCTTCCATTCTCGGACCAGCCT...AGGAGCTGGAGCCAGGATGCAGAGCAACTGTAATGGTCTGAGCGGATTTATTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043437.14 |
||
| CDS-3UTR TCA 90 bp | ATCTCACCCTCCTGCCCTCTATCTAAACTACTCAAGCCCATCAACTCCCTGAATAGAGATCCGGGAAGTTaGGATATCGCTCAGGGACAA | + |
|
Preference number: 4 (lower is better) Translates to: ISPSCPLSKLLKPINSLNRDPGS*DIAQGQ Trigger: TTGTCCCTGAGCGATATCTCAACTTCCCGGATCTCT...ATTCAGGGAGTTGATGGGCTTGAGTAGTTTAGATAGAGGGCAGGAGGGTGAGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043437.14 |
||
| CDS-3UTR GCA 90 bp | GGGGTGATGGCAAGAAGTCAAAAGAGTACTTCCAGAAATGACATGAGAACAATGGGGCAGACAGCTTGGTaGTCAGTTTCTGGAGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: GVMARSQKSTSRNDMRTMGQTAW*SVSGGW Trigger: CCAGCCTCCAGAAACTGAGCACCAAGCTGTCTGCCC...CATTGTTCTCATGTCATTTCTGGAAGTACTCTTTTGACTTCTTGCCATCACCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000043437.14 |
||
| 3UTR CAA 72 bp | TCCACCCATGGAGGTGAGAACGGACATCGAGAAAGATaGCAGCTTTTGCCTATGTCACTCCAGACCATTGAA | + |
|
Preference number: 4 (lower is better) Translates to: STHGGENGHRER*QLLPMSLQTIE Trigger: TTCAATGGTCTGGAGTGACATAGGCAAAAGCTGCAATCTTTCTCGATGTCCGTTCTCACCTCCATGGGTGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043437.14 |
||
| 3UTR CAA 72 bp | TATTCACTGTCAATAAATCCGCTCAGACCATTACAGTaGCTCTGCATCCTGGCTCCAGCTCCTTCTGACTTC | + |
|
Preference number: 4 (lower is better) Translates to: YSLSINPLRPLQ*LCILAPAPSDF Trigger: GAAGTCAGAAGGAGCTGGAGCCAGGATGCAGAGCAACTGTAATGGTCTGAGCGGATTTATTGACAGTGAATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043437.14 |
||
| CDS-3UTR CCA 90 bp | GGGGTGATGGCAAGAAGTCAAAAGAGTACTTCCAGAAATGACATGAGAACAATGCATACTCCCGTTCAATaGCTGCCCTTTGCTTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: GVMARSQKSTSRNDMRTMHTPVQ*LPFACC Trigger: ACAGCAAGCAAAGGGCAGCCATTGAACGGGAGTATG...CATTGTTCTCATGTCATTTCTGGAAGTACTCTTTTGACTTCTTGCCATCACCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043437.14 |
||
| CDS-3UTR CCA 90 bp | GGGGTGATGGCAAGAAGTCAAAAGAGTACTTCCAGAAATGACATGAGAACAATGGGGCAAGGTGAGCATTaGTGGCCACCAAATTTAGCA | + |
|
Preference number: 4 (lower is better) Translates to: GVMARSQKSTSRNDMRTMGQGEH*WPPNLA Trigger: TGCTAAATTTGGTGGCCACCAATGCTCACCTTGCCC...CATTGTTCTCATGTCATTTCTGGAAGTACTCTTTTGACTTCTTGCCATCACCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000043437.14 |
||
| 3UTR CAA 72 bp | TCCAGGAGATACAATACAATGCCTGGAGAACAGAGCTaGACTAGGCAACAACACTGCTTCCCTTCCTTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: SRRYNTMPGEQS*TRQQHCFPSFL Trigger: AAGAAAGGAAGGGAAGCAGTGTTGTTGCCTAGTCAAGCTCTGTTCTCCAGGCATTGTATTGTATCTCCTGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043437.14 |
||
| CDS CCA 90 bp | CCCCCTGCTAGGTCGCGATATCGGTCAGACGCCTGGAGTCTGGTTTaGCCTCCAGCCACAGTGGCATCCAGAAGGCAGCGCCAGGCACCA | + |
|
Preference number: 5 (lower is better) Translates to: PPARSRYRSDAWSLV*PPATVASRRQRQAP Trigger: TGGTGCCTGGCGCTGCCTTCTGGATGCCACTGTGGCTGGAGGCCAAACCAGACTCCAGGCGTCTGACCGATATCGCGACCTAGCAGGGGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043437.14 ENSMUST00000163131.8 |
||
| CDS-3UTR CAA 90 bp | AGGCCCCCTGCCATCTTGGCACAAGAGGCCCAGGCCCTGGCTTGGACTTCATACCGCCTGGAGTCTGGTTaGGCCTCCAGCCACAGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: RPPAILAQEAQALAWTSYRLESG*ASSHSG Trigger: GCCACTGTGGCTGGAGGCCAAACCAGACTCCAGGCG...GTATGAAGTCCAAGCCAGGGCCTGGGCCTCTTGTGCCAAGATGGCAGGGGGCCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043437.14 |
||
| CDS CCA 90 bp | CAGTACCCCCTGCTAGGTCGCGATATCGGTCAGACGCCTGGAGTCTaGTTTGGCCTCCAGCCACAGTGGCATCCAGAAGGCAGCGCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: QYPLLGRDIGQTPGV*FGLQPQWHPEGSAR Trigger: CCTGGCGCTGCCTTCTGGATGCCACTGTGGCTGGAGGCCAAACCAGACTCCAGGCGTCTGACCGATATCGCGACCTAGCAGGGGGTACTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043437.14 ENSMUST00000163131.8 |
||
| CDS GCA 90 bp | GGACCCGATGCCCGTGATGCTGGATCTTGTAGTCCCGGGCAGCCCTaGTTGTCCAGCGCTGAACCTCTTTCTCCAGGCCACTCTCTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: GPDARDAGSCSPGQP*LSSAEPLSPGHSLQ Trigger: CTGGAGAGAGTGGCCTGGAGAAAGAGGTTCAGCGCTGGACAAGCAGGGCTGCCCGGGACTACAAGATCCAGCATCACGGGCATCGGGTCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043437.14 |
||
| CDS CCA 90 bp | TCAAGTGAGAGGATCGGGATGACCAGGGTCCGGGGCTTTGGCTGGTaGGGGAGGTGGTGGACGCATCGGCCTAAGTCGAGGCACCATCAT | + |
|
Preference number: 5 (lower is better) Translates to: SSERIGMTRVRGFGW*GRWWTHRPKSRHHH Trigger: ATGATGGTGCCTCGACTTAGGCCGATGCGTCCACCACCTCCCCCACCAGCCAAAGCCCCGGACCCTGGTCATCCCGATCCTCTCACTTGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043437.14 |
||
| CDS-3UTR CAA 90 bp | TGTGTGGGGAGCGGGCACAGGTTCCTCCAGGAGATACAATACAATGCCTGGAGACCAGGGTCCGGGGCTTaGGCTGGTGGGGGAGGTGGT | + |
|
Preference number: 5 (lower is better) Translates to: CVGSGHRFLQEIQYNAWRPGSGA*AGGGGG Trigger: ACCACCTCCCCCACCAGCCAAAGCCCCGGACCCTGG...TCTCCAGGCATTGTATTGTATCTCCTGGAGGAACCTGTGCCCGCTCCCCACACA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000043437.14 |
||
| CDS CCA 90 bp | CTTCTCCCAGTACCCCCTGCTAGGTCGCGATATCGGTCAGACGCCTaGAGTCTGGTTTGGCCTCCAGCCACAGTGGCATCCAGAAGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: LLPVPPARSRYRSDA*SLVWPPATVASRRQ Trigger: CTGCCTTCTGGATGCCACTGTGGCTGGAGGCCAAACCAGACTCCAGGCGTCTGACCGATATCGCGACCTAGCAGGGGGTACTGGGAGAAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043437.14 ENSMUST00000163131.8 |
||
| CDS CCA 90 bp | GATATCGGTCAGACGCCTGGAGTCTGGTTTGGCCTCCAGCCACAGTaGCATCCAGAAGGCAGCGCCAGGCACCAAACACTGTCCTACCCC | + |
|
Preference number: 5 (lower is better) Translates to: DIGQTPGVWFGLQPQ*HPEGSARHQTLSYP Trigger: GGGGTAGGACAGTGTTTGGTGCCTGGCGCTGCCTTCTGGATGCCACTGTGGCTGGAGGCCAAACCAGACTCCAGGCGTCTGACCGATATC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163131.8 |
||
| CDS-3UTR CAA 90 bp | TGTGTGGGGAGCGGGCACAGGTTCCTCCAGGAGATACAATACAATGCCTGGAGACCCGGGCAGCCCTGCTaGTCCAGCGCTGAACCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: CVGSGHRFLQEIQYNAWRPGQPC*SSAEPL Trigger: AAGAGGTTCAGCGCTGGACAAGCAGGGCTGCCCGGG...TCTCCAGGCATTGTATTGTATCTCCTGGAGGAACCTGTGCCCGCTCCCCACACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043437.14 |
||
| CDS TCA 90 bp | TGTCGATGCCATGGCAGCTCTCAGGCAGGGAGAGATCCGGGAAGTTaGGATATCGCTCAGGGACAAAGCCCGCTTCACCGTGCTGGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: CRCHGSSQAGRDPGS*DIAQGQSPLHRAGS Trigger: GGAACCAGCACGGTGAAGCGGGCTTTGTCCCTGAGCGATATCTCAACTTCCCGGATCTCTCCCTGCCTGAGAGCTGCCATGGCATCGACA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043437.14 |
||
| CDS CCA 90 bp | CACTCTGTCCCGTGTAGCTGTACAGAGCGCGTGCCAAGAATGCTGTaGGCTCTCCTCCTGAGGGATTGTCGATGCCATGGCAGCTCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: HSVPCSCTERVPRML*ALLLRDCRCHGSSQ Trigger: CTGAGAGCTGCCATGGCATCGACAATCCCTCAGGAGGAGAGCCCACAGCATTCTTGGCACGCGCTCTGTACAGCTACACGGGACAGAGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043437.14 |
||
| CDS-3UTR CAA 90 bp | ACATGGTCCCCGGCTGAGAGCCCTCAGGAGGAGCCCCTCCCAATTCCCAGCCCCTTCAATGGCTGCCCTTaGCTTGCTGTAAGATCTGAT | + |
|
Preference number: 5 (lower is better) Translates to: TWSPAESPQEEPLPIPSPFNGCP*LAVRSD Trigger: ATCAGATCTTACAGCAAGCAAAGGGCAGCCATTGAA...GGGGCTGGGAATTGGGAGGGGCTCCTCCTGAGGGCTCTCAGCCGGGGACCATGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000043437.14 |
||
| CDS GCA 90 bp | GGGCAAGGTGAGCATTGGTGGCCACCAAATTTAGCAGGTACTCATTaGGGGCTGCTCTCAGCTGCTGGGAATACTGGGCTGACTGGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: GQGEHWWPPNLAGTH*GLLSAAGNTGLTGQ Trigger: CTGCCCAGTCAGCCCAGTATTCCCAGCAGCTGAGAGCAGCCCGCAATGAGTACCTGCTAAATTTGGTGGCCACCAATGCTCACCTTGCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043437.14 |
||
| CDS CCA 90 bp | GCCAAGAATGCTGTGGGCTCTCCTCCTGAGGGATTGTCGATGCCATaGCAGCTCTCAGGCAGGGAGAGATCCGGGAAGTTGAGATATCGC | + |
|
Preference number: 5 (lower is better) Translates to: AKNAVGSPPEGLSMP*QLSGRERSGKLRYR Trigger: GCGATATCTCAACTTCCCGGATCTCTCCCTGCCTGAGAGCTGCCATGGCATCGACAATCCCTCAGGAGGAGAGCCCACAGCATTCTTGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043437.14 |
||
| CDS-3UTR CAA 90 bp | GTCTCTACCACCAGAAGCAGGGGGTATGTGAGCCAAGTCTCCCTGAGCTCCAGAATCATCCACTCCATCTaGAGCCCTGGGCAACAGGCG | + |
|
Preference number: 5 (lower is better) Translates to: VSTTRSRGYVSQVSLSSRIIHSI*SPGQQA Trigger: CGCCTGTTGCCCAGGGCTCAAGATGGAGTGGATGAT...TCTGGAGCTCAGGGAGACTTGGCTCACATACCCCCTGCTTCTGGTGGTAGAGAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043437.14 |
||
| CDS TCA 90 bp | AGAAGCCATCATCCACTCCATCTTGAGCCCTGGGCAACAGGCGGATaGGTGCCCCTTCAGGGAAACTTAGCTCCTCTTCACTCTGTCCCG | + |
|
Preference number: 5 (lower is better) Translates to: RSHHPLHLEPWATGG*VPLQGNLAPLHSVP Trigger: CGGGACAGAGTGAAGAGGAGCTAAGTTTCCCTGAAGGGGCACTCATCCGCCTGTTGCCCAGGGCTCAAGATGGAGTGGATGATGGCTTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043437.14 |
||
| CDS GCA 90 bp | GTGGCCACCAAATTTAGCAGGTACTCATTGCGGGCTGCTCTCAGCTaGTGGGAATACTGGGCTGACTGGGCAGACAGCTTGGTGCTCAGT | + |
|
Preference number: 5 (lower is better) Translates to: VATKFSRYSLRAALS*WEYWADWADSLVLS Trigger: ACTGAGCACCAAGCTGTCTGCCCAGTCAGCCCAGTATTCCCAGCAGCTGAGAGCAGCCCGCAATGAGTACCTGCTAAATTTGGTGGCCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043437.14 |
||
| CDS CCA 90 bp | TGGGCAGACAGCTTGGTGCTCAGTTTCTGGAGGCTGGTCCGAGAATaGAAGATCCCATGGTCACTTCGGTTCAGCCTGGCCTGGACATCA | + |
|
Preference number: 5 (lower is better) Translates to: WADSLVLSFWRLVRE*KIPWSLRFSLAWTS Trigger: TGATGTCCAGGCCAGGCTGAACCGAAGTGACCATGGGATCTTCCATTCTCGGACCAGCCTCCAGAAACTGAGCACCAAGCTGTCTGCCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043437.14 |
||
| CDS CCA 90 bp | GCCACCAAATTTAGCAGGTACTCATTGCGGGCTGCTCTCAGCTGCTaGGAATACTGGGCTGACTGGGCAGACAGCTTGGTGCTCAGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: ATKFSRYSLRAALSC*EYWADWADSLVLSF Trigger: GAAACTGAGCACCAAGCTGTCTGCCCAGTCAGCCCAGTATTCCCAGCAGCTGAGAGCAGCCCGCAATGAGTACCTGCTAAATTTGGTGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043437.14 |
||
| CDS-3UTR CAA 90 bp | GCTCCAGATCAGGTAATCTCACCCTCCTGCCCTCTATCTAAACTACTCAAGCCCCACCTCATCCTGGGCTaGGGTCATGGCTGGCTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: APDQVISPSCPLSKLLKPHLILG*GHGWLQ Trigger: CTGAAGCCAGCCATGACCCAAGCCCAGGATGAGGTG...GGGCTTGAGTAGTTTAGATAGAGGGCAGGAGGGTGAGATTACCTGATCTGGAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043437.14 |
||
| CDS-3UTR CAA 90 bp | CCACTGGACAGCTCTGCCCCTCAGTTGAGGGACCAACTCTACTTCCATCTGGAGGAGAGATCCGGGAAGTaGAGATATCGCTCAGGGACA | + |
|
Preference number: 5 (lower is better) Translates to: PLDSSAPQLRDQLYFHLEERSGK*RYRSGT Trigger: TGTCCCTGAGCGATATCTCAACTTCCCGGATCTCTC...CTCCAGATGGAAGTAGAGTTGGTCCCTCAACTGAGGGGCAGAGCTGTCCAGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043437.14 |
||
| CDS-3UTR CAA 90 bp | CCAATTCTTTCCTCTGAATTTCCTCTAGGCAACTACAGCAGGGGTCAGGTGGCACTAAGCACCTGCTCCTaGGCGCTTCTCCCAGTACCC | + |
|
Preference number: 5 (lower is better) Translates to: PILSSEFPLGNYSRGQVALSTCS*ALLPVP Trigger: GGGTACTGGGAGAAGCGCCAAGGAGCAGGTGCTTAG...TGCCACCTGACCCCTGCTGTAGTTGCCTAGAGGAAATTCAGAGGAAAGAATTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043437.14 |
||
| CDS-3UTR CAA 90 bp | TCAGACCATTACAGTTGCTCTGCATCCTGGCTCCAGCTCCTTCTGACTTCCAAGGACTGGGCAGACAGCTaGGTGCTCAGTTTCTGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: SDHYSCSASWLQLLLTSKDWADS*VLSFWR Trigger: CCTCCAGAAACTGAGCACCAAGCTGTCTGCCCAGTC...CTTGGAAGTCAGAAGGAGCTGGAGCCAGGATGCAGAGCAACTGTAATGGTCTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043437.14 |
||
| CDS-3UTR CAA 90 bp | CTCAGTCTTCACTGTGCTGATGGGTTACCAGCAGGCATTGCCAGGGGACGGATATCACTTACCAGGACCTaGAGCAGTGCTGGCAATTCC | + |
|
Preference number: 5 (lower is better) Translates to: LSLHCADGLPAGIARGRISLTRT*SSAGNS Trigger: GGAATTGCCAGCACTGCTCAAGGTCCTGGTAAGTGA...TATCCGTCCCCTGGCAATGCCTGCTGGTAACCCATCAGCACAGTGAAGACTGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043437.14 |
||
| CDS-3UTR CAA 90 bp | GCTCCAGATCAGGTAATCTCACCCTCCTGCCCTCTATCTAAACTACTCAAGCCCGGGCAGTCAAGGACTTaGTCAGAAGGCAGAGCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: APDQVISPSCPLSKLLKPGQSRT*SEGRAG Trigger: GCCTGCTCTGCCTTCTGACAAAGTCCTTGACTGCCC...GGGCTTGAGTAGTTTAGATAGAGGGCAGGAGGGTGAGATTACCTGATCTGGAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043437.14 |
||
| CDS TCA 90 bp | TCAGGGGGTCCCTCAAGTATTCTGACAGCTCACTTACCAGGACCTTaGGCAGTGCTGGCAATTCCTCTTGGTAGTAGTGGGCAAGGTGAG | + |
|
Preference number: 5 (lower is better) Translates to: SGGPSSILTAHLPGP*AVLAIPLGSSGQGE Trigger: CTCACCTTGCCCACTACTACCAAGAGGAATTGCCAGCACTGCTCAAGGTCCTGGTAAGTGAGCTGTCAGAATACTTGAGGGACCCCCTGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043437.14 |
||
| CDS CCA 90 bp | GTGCTGGCAATTCCTCTTGGTAGTAGTGGGCAAGGTGAGCATTGGTaGCCACCAAATTTAGCAGGTACTCATTGCGGGCTGCTCTCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: VLAIPLGSSGQGEHW*PPNLAGTHCGLLSA Trigger: AGCTGAGAGCAGCCCGCAATGAGTACCTGCTAAATTTGGTGGCCACCAATGCTCACCTTGCCCACTACTACCAAGAGGAATTGCCAGCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043437.14 |
||
| CDS-3UTR CAA 90 bp | CAGCCAGCTTCTGGAGGGCCTGGTGAGAAAAACCATCCCGCGTGGAGATCCTTTTTCAATGGCTGCCCTTaGCTTGCTGTAAGATCTGAT | + |
|
Preference number: 5 (lower is better) Translates to: QPASGGPGEKNHPAWRSFFNGCP*LAVRSD Trigger: ATCAGATCTTACAGCAAGCAAAGGGCAGCCATTGAA...AAAGGATCTCCACGCGGGATGGTTTTTCTCACCAGGCCCTCCAGAAGCTGGCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000164222.2 |
||
| CDS-3UTR CAA 90 bp | TCAATAAATCCGCTCAGACCATTACAGTTGCTCTGCATCCTGGCTCCAGCTCCTTTTAGCAGGTACTCATaGCGGGCTGCTCTCAGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: SINPLRPLQLLCILAPAPFSRYS*RAALSC Trigger: GCAGCTGAGAGCAGCCCGCAATGAGTACCTGCTAAA...AGGAGCTGGAGCCAGGATGCAGAGCAACTGTAATGGTCTGAGCGGATTTATTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043437.14 |
||
| CDS-3UTR CAA 90 bp | TCAGACCATTACAGTTGCTCTGCATCCTGGCTCCAGCTCCTTCTGACTTCCAAGAAACAGCTTCACATCTaGTTCCCAGTTTACCTGAGA | + |
|
Preference number: 5 (lower is better) Translates to: SDHYSCSASWLQLLLTSKKQLHI*FPVYLR Trigger: TCTCAGGTAAACTGGGAACAAGATGTGAAGCTGTTT...CTTGGAAGTCAGAAGGAGCTGGAGCCAGGATGCAGAGCAACTGTAATGGTCTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043437.14 |
||
| CDS CCA 72 bp | GAGAGGATCGGGATGACCAGGGTCCGGGGCTTTGGCTaGTGGGGGAGGTGGTGGACGCATCGGCCTAAGTCG | + |
|
Preference number: 6 (lower is better) Translates to: ERIGMTRVRGFG*WGRWWTHRPKS Trigger: CGACTTAGGCCGATGCGTCCACCACCTCCCCCACCAGCCAAAGCCCCGGACCCTGGTCATCCCGATCCTCTC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043437.14 |
||
| CDS CAA 90 bp | CCCGATGCCCGTGATGCTGGATCTTGTAGTCCCGGGCAGCCCTGCTaGTCCAGCGCTGAACCTCTTTCTCCAGGCCACTCTCTCCAGCCA | + |
|
Preference number: 6 (lower is better) Translates to: PDARDAGSCSPGQPC*SSAEPLSPGHSLQP Trigger: TGGCTGGAGAGAGTGGCCTGGAGAAAGAGGTTCAGCGCTGGACAAGCAGGGCTGCCCGGGACTACAAGATCCAGCATCACGGGCATCGGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043437.14 |
||
| CDS GCA 72 bp | GCCTGCTGGAGGCTCTCTGTCCCCTTTCTAAGCACCTaGTCCTTGGCGCTTCTCCCAGTACCCCCTGCTAGG | + |
|
Preference number: 6 (lower is better) Translates to: ACWRLSVPFLST*SLALLPVPPAR Trigger: CCTAGCAGGGGGTACTGGGAGAAGCGCCAAGGAGCAGGTGCTTAGAAAGGGGACAGAGAGCCTCCAGCAGGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000043437.14 ENSMUST00000163131.8 |
||
| CDS GCA 72 bp | GCCCGTGATGCTGGATCTTGTAGTCCCGGGCAGCCCTaGTTGTCCAGCGCTGAACCTCTTTCTCCAGGCCAC | + |
|
Preference number: 6 (lower is better) Translates to: ARDAGSCSPGQP*LSSAEPLSPGH Trigger: GTGGCCTGGAGAAAGAGGTTCAGCGCTGGACAAGCAGGGCTGCCCGGGACTACAAGATCCAGCATCACGGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043437.14 |
||
| CDS GCA 72 bp | GAAGGCAGCGCCAGGCACCAAACACTGTCCTACCCCTaGTGTCTGCCTCTCCACTCCGCTGCCCTTCTCTCT | + |
|
Preference number: 6 (lower is better) Translates to: EGSARHQTLSYP*CLPLHSAALLS Trigger: AGAGAGAAGGGCAGCGGAGTGGAGAGGCAGACAGCAGGGGTAGGACAGTGTTTGGTGCCTGGCGCTGCCTTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163131.8 |
||
| CDS TCA 72 bp | CAGAGCGCGTGCCAAGAATGCTGTGGGCTCTCCTCCTaGGGGATTGTCGATGCCATGGCAGCTCTCAGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: QSACQECCGLSS*GIVDAMAALRQ Trigger: CTGCCTGAGAGCTGCCATGGCATCGACAATCCCTCAGGAGGAGAGCCCACAGCATTCTTGGCACGCGCTCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043437.14 |
||
| CDS GCA 72 bp | ATGGTCACTTCGGTTCAGCCTGGCCTGGACATCAGCTaGCTTCTCCTGGGCCAAGGCCCATACACGCTGTCG | + |
|
Preference number: 6 (lower is better) Translates to: MVTSVQPGLDIS*LLLGQGPYTLS Trigger: CGACAGCGTGTATGGGCCTTGGCCCAGGAGAAGGCAGCTGATGTCCAGGCCAGGCTGAACCGAAGTGACCAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043437.14 |
||
| CDS CCA 72 bp | CGGGCTGCTCTCAGCTGCTGGGAATACTGGGCTGACTaGGCAGACAGCTTGGTGCTCAGTTTCTGGAGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: RAALSCWEYWAD*ADSLVLSFWRL Trigger: CAGCCTCCAGAAACTGAGCACCAAGCTGTCTGCCCAGTCAGCCCAGTATTCCCAGCAGCTGAGAGCAGCCCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043437.14 |
||
| CDS CCA 72 bp | CTAAGTCGCCGCTCCTGTTCCACCTCATCCTGGGCTTaGGTCATGGCTGGCTTCAGCCAGCGCTGTACATCG | + |
|
Preference number: 6 (lower is better) Translates to: LSRRSCSTSSWA*VMAGFSQRCTS Trigger: CGATGTACAGCGCTGGCTGAAGCCAGCCATGACCCAAGCCCAGGATGAGGTGGAACAGGAGCGGCGACTTAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043437.14 |
||
| CDS CCA 72 bp | GCTTCACTAAGTCGCCGCTCCTGTTCCACCTCATCCTaGGCTTGGGTCATGGCTGGCTTCAGCCAGCGCTGT | + |
|
Preference number: 6 (lower is better) Translates to: ASLSRRSCSTSS*AWVMAGFSQRC Trigger: ACAGCGCTGGCTGAAGCCAGCCATGACCCAAGCCCAGGATGAGGTGGAACAGGAGCGGCGACTTAGTGAAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043437.14 |
||
| CDS CAA 90 bp | TACAGAGCGCGTGCCAAGAATGCTGTGGGCTCTCCTCCTGAGGGATaGTCGATGCCATGGCAGCTCTCAGGCAGGGAGAGATCCGGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: YRARAKNAVGSPPEG*SMPWQLSGRERSGK Trigger: CTTCCCGGATCTCTCCCTGCCTGAGAGCTGCCATGGCATCGACAATCCCTCAGGAGGAGAGCCCACAGCATTCTTGGCACGCGCTCTGTA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043437.14 |
||
| CDS GCA 72 bp | AGAATGCTGTGGGCTCTCCTCCTGAGGGATTGTCGATaGCATGGCAGCTCTCAGGCAGGGAGAGATCCGGGA | + |
|
Preference number: 6 (lower is better) Translates to: RMLWALLLRDCR*HGSSQAGRDPG Trigger: TCCCGGATCTCTCCCTGCCTGAGAGCTGCCATGGCATCGACAATCCCTCAGGAGGAGAGCCCACAGCATTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043437.14 |
||
| CDS CCA 72 bp | CCGTGTAGCTGTACAGAGCGCGTGCCAAGAATGCTGTaGGCTCTCCTCCTGAGGGATTGTCGATGCCATGGC | + |
|
Preference number: 6 (lower is better) Translates to: PCSCTERVPRML*ALLLRDCRCHG Trigger: GCCATGGCATCGACAATCCCTCAGGAGGAGAGCCCACAGCATTCTTGGCACGCGCTCTGTACAGCTACACGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043437.14 |
||
| CDS CAA 72 bp | ACTAAGTCGCCGCTCCTGTTCCACCTCATCCTGGGCTaGGGTCATGGCTGGCTTCAGCCAGCGCTGTACATC | + |
|
Preference number: 6 (lower is better) Translates to: TKSPLLFHLILG*GHGWLQPALYI Trigger: GATGTACAGCGCTGGCTGAAGCCAGCCATGACCCAAGCCCAGGATGAGGTGGAACAGGAGCGGCGACTTAGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043437.14 |
||
| CDS CAA 72 bp | CCATGGCAGCTCTCAGGCAGGGAGAGATCCGGGAAGTaGAGATATCGCTCAGGGACAAAGCCCGCTTCACCG | + |
|
Preference number: 6 (lower is better) Translates to: PWQLSGRERSGK*RYRSGTKPASP Trigger: CGGTGAAGCGGGCTTTGTCCCTGAGCGATATCTCAACTTCCCGGATCTCTCCCTGCCTGAGAGCTGCCATGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043437.14 |
||
| CDS CAA 72 bp | CGTGCCAAGAATGCTGTGGGCTCTCCTCCTGAGGGATaGTCGATGCCATGGCAGCTCTCAGGCAGGGAGAGA | + |
|
Preference number: 6 (lower is better) Translates to: RAKNAVGSPPEG*SMPWQLSGRER Trigger: TCTCTCCCTGCCTGAGAGCTGCCATGGCATCGACAATCCCTCAGGAGGAGAGCCCACAGCATTCTTGGCACG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043437.14 |
||
| CDS CAA 90 bp | TTGTCGATGCCATGGCAGCTCTCAGGCAGGGAGAGATCCGGGAAGTaGAGATATCGCTCAGGGACAAAGCCCGCTTCACCGTGCTGGTTC | + |
|
Preference number: 6 (lower is better) Translates to: LSMPWQLSGRERSGK*RYRSGTKPASPCWF Trigger: GAACCAGCACGGTGAAGCGGGCTTTGTCCCTGAGCGATATCTCAACTTCCCGGATCTCTCCCTGCCTGAGAGCTGCCATGGCATCGACAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043437.14 |
||
| CDS TCA 72 bp | CATCCACTCCATCTTGAGCCCTGGGCAACAGGCGGATaGGTGCCCCTTCAGGGAAACTTAGCTCCTCTTCAC | + |
|
Preference number: 6 (lower is better) Translates to: HPLHLEPWATGG*VPLQGNLAPLH Trigger: GTGAAGAGGAGCTAAGTTTCCCTGAAGGGGCACTCATCCGCCTGTTGCCCAGGGCTCAAGATGGAGTGGATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043437.14 |
||
| CDS CCA 72 bp | TGGGCTGACTGGGCAGACAGCTTGGTGCTCAGTTTCTaGAGGCTGGTCCGAGAATGGAAGATCCCATGGTCA | + |
|
Preference number: 6 (lower is better) Translates to: WADWADSLVLSF*RLVREWKIPWS Trigger: TGACCATGGGATCTTCCATTCTCGGACCAGCCTCCAGAAACTGAGCACCAAGCTGTCTGCCCAGTCAGCCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043437.14 |
||
| CDS CCA 72 bp | AGATATCGCTCAGGGACAAAGCCCGCTTCACCGTGCTaGTTCCGAGCCTTAACCCACTCGTCAGCATCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: RYRSGTKPASPC*FRALTHSSASP Trigger: AGGAGATGCTGACGAGTGGGTTAAGGCTCGGAACCAGCACGGTGAAGCGGGCTTTGTCCCTGAGCGATATCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043437.14 |
||
| CDS CAA 72 bp | AAATTCTCCCCTCCAGAAGCCATCATCCACTCCATCTaGAGCCCTGGGCAACAGGCGGATGAGTGCCCCTTC | + |
|
Preference number: 6 (lower is better) Translates to: KFSPPEAIIHSI*SPGQQADECPF Trigger: GAAGGGGCACTCATCCGCCTGTTGCCCAGGGCTCAAGATGGAGTGGATGATGGCTTCTGGAGGGGAGAATTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043437.14 |
||
| CDS GCA 72 bp | CTTCTGGAGGGCCTGGCCATACTCCCGTTCAATGGCTaGCCTTTGCTTGCTGTAAGATCTGATGTCCTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: LLEGLAILPFNG*PLLAVRSDVLQ Trigger: CTGGAGGACATCAGATCTTACAGCAAGCAAAGGGCAGCCATTGAACGGGAGTATGGCCAGGCCCTCCAGAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043437.14 ENSMUST00000163131.8 ENSMUST00000166148.8 |
||
| CDS GCA 72 bp | GAGCATTGGTGGCCACCAAATTTAGCAGGTACTCATTaGGGGCTGCTCTCAGCTGCTGGGAATACTGGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: EHWWPPNLAGTH*GLLSAAGNTGL Trigger: CAGCCCAGTATTCCCAGCAGCTGAGAGCAGCCCGCAATGAGTACCTGCTAAATTTGGTGGCCACCAATGCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043437.14 |
||
| CDS GCA 72 bp | TTGAGATATCGCTCAGGGACAAAGCCCGCTTCACCGTaGTGGTTCCGAGCCTTAACCCACTCGTCAGCATCT | + |
|
Preference number: 6 (lower is better) Translates to: LRYRSGTKPASP*WFRALTHSSAS Trigger: AGATGCTGACGAGTGGGTTAAGGCTCGGAACCAGCACGGTGAAGCGGGCTTTGTCCCTGAGCGATATCTCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043437.14 |
||
| CDS CCA 72 bp | AGTTTCTGGAGGCTGGTCCGAGAATGGAAGATCCCATaGTCACTTCGGTTCAGCCTGGCCTGGACATCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: SFWRLVREWKIP*SLRFSLAWTSA Trigger: AGCTGATGTCCAGGCCAGGCTGAACCGAAGTGACCATGGGATCTTCCATTCTCGGACCAGCCTCCAGAAACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043437.14 |
||
| CDS CCA 72 bp | ACTGGGCAGACAGCTTGGTGCTCAGTTTCTGGAGGCTaGTCCGAGAATGGAAGATCCCATGGTCACTTCGGT | + |
|
Preference number: 6 (lower is better) Translates to: TGQTAWCSVSGG*SENGRSHGHFG Trigger: ACCGAAGTGACCATGGGATCTTCCATTCTCGGACCAGCCTCCAGAAACTGAGCACCAAGCTGTCTGCCCAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043437.14 |
||
| CDS GCA 72 bp | AAATTTAGCAGGTACTCATTGCGGGCTGCTCTCAGCTaGTGGGAATACTGGGCTGACTGGGCAGACAGCTTG | + |
|
Preference number: 6 (lower is better) Translates to: KFSRYSLRAALS*WEYWADWADSL Trigger: CAAGCTGTCTGCCCAGTCAGCCCAGTATTCCCAGCAGCTGAGAGCAGCCCGCAATGAGTACCTGCTAAATTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043437.14 |
||
| CDS CAA 72 bp | ACTTACCAGGACCTTGAGCAGTGCTGGCAATTCCTCTaGGTAGTAGTGGGCAAGGTGAGCATTGGTGGCCAC | + |
|
Preference number: 6 (lower is better) Translates to: TYQDLEQCWQFL*VVVGKVSIGGH Trigger: GTGGCCACCAATGCTCACCTTGCCCACTACTACCAAGAGGAATTGCCAGCACTGCTCAAGGTCCTGGTAAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043437.14 |
||