Pregenerated sensors for FCGR2B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026656Ensembl transcript IDs: ENSMUST00000027966.14, ENSMUST00000081103.12, ENSMUST00000159688.2, ENSMUST00000159969.8
Found 116 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ACCAGGCCAGGTGTGGTGGTGGATAGTCGTGCATGCTCGTTATCCTaGAGGTCTAAAGGCACAGGCTTCAGGACTGGGAGTTTGAGGGAG | + |
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Preference number: 1 (lower is better) Translates to: TRPGVVVDSRACSLS*RSKGTGFRTGSLRE Trigger: CTCCCTCAAACTCCCAGTCCTGAAGCCTGTGCCTTTAGACCTCCAGGATAACGAGCATGCACGACTATCCACCACCACACCTGGCCTGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027966.14 |
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| 3UTR GCA 90 bp | CTATCTACTGCTACCAGGCCAGGTGTGGTGGTGGATAGTCGTGCATaGTCGTTATCCTGGAGGTCTAAAGGCACAGGCTTCAGGACTGGG | + |
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Preference number: 1 (lower is better) Translates to: LSTATRPGVVVDSRA*SLSWRSKGTGFRTG Trigger: CCCAGTCCTGAAGCCTGTGCCTTTAGACCTCCAGGATAACGAGCATGCACGACTATCCACCACCACACCTGGCCTGGTAGCAGTAGATAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027966.14 |
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| 3UTR CCA 90 bp | CTCTCCTCTACCTCCTATCTACTGCTACCAGGCCAGGTGTGGTGGTaGATAGTCGTGCATGCTCGTTATCCTGGAGGTCTAAAGGCACAG | + |
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Preference number: 1 (lower is better) Translates to: LSSTSYLLLPGQVWW*IVVHARYPGGLKAQ Trigger: CTGTGCCTTTAGACCTCCAGGATAACGAGCATGCACGACTATCCACCACCACACCTGGCCTGGTAGCAGTAGATAGGAGGTAGAGGAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027966.14 |
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| 3UTR CCA 90 bp | GTCCTCTCCTCTACCTCCTATCTACTGCTACCAGGCCAGGTGTGGTaGTGGATAGTCGTGCATGCTCGTTATCCTGGAGGTCTAAAGGCA | + |
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Preference number: 1 (lower is better) Translates to: VLSSTSYLLLPGQVW*WIVVHARYPGGLKA Trigger: TGCCTTTAGACCTCCAGGATAACGAGCATGCACGACTATCCACCACCACACCTGGCCTGGTAGCAGTAGATAGGAGGTAGAGGAGAGGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027966.14 |
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| 3UTR CCA 90 bp | TCTGTCCTCTCCTCTACCTCCTATCTACTGCTACCAGGCCAGGTGTaGTGGTGGATAGTCGTGCATGCTCGTTATCCTGGAGGTCTAAAG | + |
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Preference number: 1 (lower is better) Translates to: SVLSSTSYLLLPGQV*WWIVVHARYPGGLK Trigger: CTTTAGACCTCCAGGATAACGAGCATGCACGACTATCCACCACCACACCTGGCCTGGTAGCAGTAGATAGGAGGTAGAGGAGAGGACAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027966.14 |
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| 3UTR TCA 90 bp | GGAAGTGGAAACAAAAAGACAAGTTCACTGGAAGCATGTTCAGTTTaGAGGGAGGGGCACTGGCCCTCTACTCCAAATCCCTGTCTGTCC | + |
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Preference number: 1 (lower is better) Translates to: GSGNKKTSSLEACSV*REGHWPSTPNPCLS Trigger: GGACAGACAGGGATTTGGAGTAGAGGGCCAGTGCCCCTCCCTTCAAACTGAACATGCTTCCAGTGAACTTGTCTTTTTGTTTCCACTTCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027966.14 |
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| 3UTR TCA 90 bp | GGGAACCAATCTCGTAGTGTCTGTTGGTTTCAGGACTCACAGAAGTaGCTCTGGATGTTTTCTTTAATATCTACAGCATCCCTTGGACCA | + |
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Preference number: 1 (lower is better) Translates to: GNQSRSVCWFQDSQK*LWMFSLISTASLGP Trigger: TGGTCCAAGGGATGCTGTAGATATTAAAGAAAACATCCAGAGTCACTTCTGTGAGTCCTGAAACCAACAGACACTACGAGATTGGTTCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027966.14 ENSMUST00000081103.12 ENSMUST00000159969.8 |
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| 3UTR TCA 90 bp | GTCATCCTTCAGTTACCACTGGCTTTCATCCAAAGTTTGACTTCCTaGGAACTCCTGTTACATAACAAAGTGATTACTCTGTTTGTCATA | + |
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Preference number: 1 (lower is better) Translates to: VILQLPLAFIQSLTS*ELLLHNKVITLFVI Trigger: TATGACAAACAGAGTAATCACTTTGTTATGTAACAGGAGTTCTCAGGAAGTCAAACTTTGGATGAAAGCCAGTGGTAACTGAAGGATGAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027966.14 |
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| 3UTR TCA 90 bp | TTAAATAGCTGCCTGAGTGATTTTTGTGAACATACAAACATAATATaGTCCAAGCAACTAGGAGGTGGGAGTAGCAAGATCAGGAGTTCA | + |
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Preference number: 1 (lower is better) Translates to: LNSCLSDFCEHTNII*SKQLGGGSSKIRSS Trigger: TGAACTCCTGATCTTGCTACTCCCACCTCCTAGTTGCTTGGATCATATTATGTTTGTATGTTCACAAAAATCACTCAGGCAGCTATTTAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027966.14 |
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| 3UTR TCA 90 bp | CAATCTATTGCATTGTTCTGGTCTCTGGACTATGTTAGTGAAAAATaGAAACACAGGGCTGTTGTGAGCTTACATTTTAGTATATATGAG | + |
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Preference number: 1 (lower is better) Translates to: QSIALFWSLDYVSEK*KHRAVVSLHFSIYE Trigger: CTCATATATACTAAAATGTAAGCTCACAACAGCCCTGTGTTTTCATTTTTCACTAACATAGTCCAGAGACCAGAACAATGCAATAGATTG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027966.14 |
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| 3UTR CAA 90 bp | AGGAAGTGGAAACAAAAAGACAAGTTCACTGGAAGCATGTTCAGTTaGAAGGGAGGGGCACTGGCCCTCTACTCCAAATCCCTGTCTGTC | + |
|
Preference number: 2 (lower is better) Translates to: RKWKQKDKFTGSMFS*KGGALALYSKSLSV Trigger: GACAGACAGGGATTTGGAGTAGAGGGCCAGTGCCCCTCCCTTCAAACTGAACATGCTTCCAGTGAACTTGTCTTTTTGTTTCCACTTCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027966.14 |
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| 3UTR-3UTR GCA 90 bp | GGACTCACAGAAGTGACTCTGGATGTTTTCTTTAATATCTACAGCATCCCTTGGCTGGCCTTTCTGGCTTaGTTTTCCCAATGCCAAGGG | + |
|
Preference number: 2 (lower is better) Translates to: GLTEVTLDVFFNIYSIPWLAFLA*FSQCQG Trigger: CCCTTGGCATTGGGAAAAGCAAGCCAGAAAGGCCAG...CCAAGGGATGCTGTAGATATTAAAGAAAACATCCAGAGTCACTTCTGTGAGTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027966.14 ENSMUST00000081103.12 ENSMUST00000159969.8 |
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| 3UTR-3UTR GCA 90 bp | GTTTCAGGACTCACAGAAGTGACTCTGGATGTTTTCTTTAATATCTACAGCATCCTGGCCTTTCTGGCTTaGTTTTCCCAATGCCAAGGG | + |
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Preference number: 2 (lower is better) Translates to: VSGLTEVTLDVFFNIYSILAFLA*FSQCQG Trigger: CCCTTGGCATTGGGAAAAGCAAGCCAGAAAGGCCAG...GATGCTGTAGATATTAAAGAAAACATCCAGAGTCACTTCTGTGAGTCCTGAAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027966.14 ENSMUST00000081103.12 ENSMUST00000159969.8 |
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| 3UTR-3UTR CCA 90 bp | AACCCCAGAGAGCTCAGCCTATATTCCAATCATTGCAGCCTTGAAAAAGTAAATAGATCCTGGCCTTTCTaGCTTGCTTTTCCCAATGCC | + |
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Preference number: 2 (lower is better) Translates to: NPRELSLYSNHCSLEKVNRSWPF*LAFPNA Trigger: GGCATTGGGAAAAGCAAGCCAGAAAGGCCAGGATCT...ATTTACTTTTTCAAGGCTGCAATGATTGGAATATAGGCTGAGCTCTCTGGGGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000027966.14 |
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| 3UTR-3UTR CCA 90 bp | AACCCCAGAGAGCTCAGCCTATATTCCAATCATTGCAGCCTTGAAAAAGTAAATTCTCGTAGTGTCTGTTaGTTTCAGGACTCACAGAAG | + |
|
Preference number: 2 (lower is better) Translates to: NPRELSLYSNHCSLEKVNSRSVC*FQDSQK Trigger: CTTCTGTGAGTCCTGAAACCAACAGACACTACGAGA...ATTTACTTTTTCAAGGCTGCAATGATTGGAATATAGGCTGAGCTCTCTGGGGTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027966.14 |
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| 3UTR GCA 72 bp | GCTACCAGGCCAGGTGTGGTGGTGGATAGTCGTGCATaGTCGTTATCCTGGAGGTCTAAAGGCACAGGCTTC | + |
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Preference number: 3 (lower is better) Translates to: ATRPGVVVDSRA*SLSWRSKGTGF Trigger: GAAGCCTGTGCCTTTAGACCTCCAGGATAACGAGCATGCACGACTATCCACCACCACACCTGGCCTGGTAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027966.14 |
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| 3UTR CCA 72 bp | TCTACCTCCTATCTACTGCTACCAGGCCAGGTGTGGTaGTGGATAGTCGTGCATGCTCGTTATCCTGGAGGT | + |
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Preference number: 3 (lower is better) Translates to: STSYLLLPGQVW*WIVVHARYPGG Trigger: ACCTCCAGGATAACGAGCATGCACGACTATCCACCACCACACCTGGCCTGGTAGCAGTAGATAGGAGGTAGA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027966.14 |
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| 3UTR CCA 72 bp | TCTACAGCATCCCTTGGACCAGGAGACACTAGATCCTaGCCTTTCTGGCTTGCTTTTCCCAATGCCAAGGGA | + |
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Preference number: 3 (lower is better) Translates to: STASLGPGDTRS*PFWLAFPNAKG Trigger: TCCCTTGGCATTGGGAAAAGCAAGCCAGAAAGGCCAGGATCTAGTGTCTCCTGGTCCAAGGGATGCTGTAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027966.14 ENSMUST00000081103.12 ENSMUST00000159969.8 |
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| 3UTR CCA 72 bp | GACTGGGAGTTTGAGGGAGACAAACTAAAGAGGGGGTaGGGGGCCATCTATGTGGCTGTAAAGACGTCATTG | + |
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Preference number: 3 (lower is better) Translates to: DWEFEGDKLKRG*GAIYVAVKTSL Trigger: CAATGACGTCTTTACAGCCACATAGATGGCCCCCCACCCCCTCTTTAGTTTGTCTCCCTCAAACTCCCAGTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000027966.14 |
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| 3UTR-3UTR CAA 90 bp | TATCTTAGCGTGAATTATAAGCAGTTCCCACGTTGCTGCAGTCTCTTAACGGCACCTGGCCTTTCTGGCTaGCTTTTCCCAATGCCAAGG | + |
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Preference number: 3 (lower is better) Translates to: YLSVNYKQFPRCCSLLTAPGLSG*LFPMPR Trigger: CCTTGGCATTGGGAAAAGCAAGCCAGAAAGGCCAGG...TGCCGTTAAGAGACTGCAGCAACGTGGGAACTGCTTATAATTCACGCTAAGATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027966.14 ENSMUST00000081103.12 |
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| 3UTR CCA 72 bp | AGATCCACACAAGGATGGACCCGTGCAACCACGGCTTaGTTATCAGAGAGTTCAAAGCAGAAATTCTGGAGT | + |
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Preference number: 3 (lower is better) Translates to: RSTQGWTRATTA*LSESSKQKFWS Trigger: ACTCCAGAATTTCTGCTTTGAACTCTCTGATAACCAAGCCGTGGTTGCACGGGTCCATCCTTGTGTGGATCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027966.14 |
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| 3UTR-3UTR CAA 90 bp | GATGGACCCGTGCAACCACGGCTTGGTTATCAGAGAGTTCAAAGCAGAAATTCTGCTGTAAAGACGTCATaGGTGCTAAGACTGTTGTTA | + |
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Preference number: 3 (lower is better) Translates to: DGPVQPRLGYQRVQSRNSAVKTS*VLRLLL Trigger: TAACAACAGTCTTAGCACCAATGACGTCTTTACAGC...AGAATTTCTGCTTTGAACTCTCTGATAACCAAGCCGTGGTTGCACGGGTCCATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027966.14 |
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| 3UTR CCA 72 bp | GAAAGGAACCCTTCACTCATGTCCCCACAAATAAGCTaGATAAACTCACTGGTGCACCAAACTAGACTTGAG | + |
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Preference number: 3 (lower is better) Translates to: ERNPSLMSPQIS*INSLVHQTRLE Trigger: CTCAAGTCTAGTTTGGTGCACCAGTGAGTTTATCCAGCTTATTTGTGGGGACATGAGTGAAGGGTTCCTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027966.14 |
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| 3UTR-3UTR CAA 90 bp | AACATTAATTGTTCTCCTTATCTTAGCGTGAATTATAAGCAGTTCCCACGTTGCCCTGGCCTTTCTGGCTaGCTTTTCCCAATGCCAAGG | + |
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Preference number: 3 (lower is better) Translates to: NINCSPYLSVNYKQFPRCPGLSG*LFPMPR Trigger: CCTTGGCATTGGGAAAAGCAAGCCAGAAAGGCCAGG...GCAACGTGGGAACTGCTTATAATTCACGCTAAGATAAGGAGAACAATTAATGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027966.14 ENSMUST00000081103.12 |
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| 3UTR TCA 72 bp | TCTCGTAGTGTCTGTTGGTTTCAGGACTCACAGAAGTaGCTCTGGATGTTTTCTTTAATATCTACAGCATCC | + |
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Preference number: 3 (lower is better) Translates to: SRSVCWFQDSQK*LWMFSLISTAS Trigger: GGATGCTGTAGATATTAAAGAAAACATCCAGAGTCACTTCTGTGAGTCCTGAAACCAACAGACACTACGAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027966.14 ENSMUST00000081103.12 ENSMUST00000159969.8 |
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| 3UTR TCA 72 bp | TGCATCCTAACATTAATTGTTCTCCTTATCTTAGCGTaGATTATAAGCAGTTCCCACGTTGCTGCAGTCTCT | + |
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Preference number: 3 (lower is better) Translates to: CILTLIVLLILA*IISSSHVAAVS Trigger: AGAGACTGCAGCAACGTGGGAACTGCTTATAATTCACGCTAAGATAAGGAGAACAATTAATGTTAGGATGCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027966.14 ENSMUST00000081103.12 |
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| 3UTR TCA 72 bp | CAGTTACCACTGGCTTTCATCCAAAGTTTGACTTCCTaGGAACTCCTGTTACATAACAAAGTGATTACTCTG | + |
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Preference number: 3 (lower is better) Translates to: QLPLAFIQSLTS*ELLLHNKVITL Trigger: CAGAGTAATCACTTTGTTATGTAACAGGAGTTCTCAGGAAGTCAAACTTTGGATGAAAGCCAGTGGTAACTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027966.14 |
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| 3UTR TCA 72 bp | GCATTGTTCTGGTCTCTGGACTATGTTAGTGAAAAATaGAAACACAGGGCTGTTGTGAGCTTACATTTTAGT | + |
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Preference number: 3 (lower is better) Translates to: ALFWSLDYVSEK*KHRAVVSLHFS Trigger: ACTAAAATGTAAGCTCACAACAGCCCTGTGTTTTCATTTTTCACTAACATAGTCCAGAGACCAGAACAATGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027966.14 |
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| 3UTR TCA 72 bp | ACAGGTTGGTACAAGTCTGGTTTATCATCACCGAGATaGTGCATCCTAACATTAATTGTTCTCCTTATCTTA | + |
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Preference number: 3 (lower is better) Translates to: TGWYKSGLSSPR*CILTLIVLLIL Trigger: TAAGATAAGGAGAACAATTAATGTTAGGATGCATCATCTCGGTGATGATAAACCAGACTTGTACCAACCTGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027966.14 ENSMUST00000081103.12 |
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| CDS-3UTR TCA 90 bp | GCATCCCTTGGACCAGGAGACACTAGATCCTGGCCTTTCTGGCTTGCTTTTCCCATGGAGGCCCTGGGCTaGCAGGCACTGAGCCCCCAG | + |
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Preference number: 4 (lower is better) Translates to: ASLGPGDTRSWPFWLAFPMEALG*QALSPQ Trigger: CTGGGGGCTCAGTGCCTGTCAGCCCAGGGCCTCCAT...GGGAAAAGCAAGCCAGAAAGGCCAGGATCTAGTGTCTCCTGGTCCAAGGGATGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027966.14 ENSMUST00000159969.8 |
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| CDS-3UTR TCA 90 bp | TTGGACCAGGAGACACTAGATCCTGGCCTTTCTGGCTTGCTTTTCCCAATGCCAATGGAGGCCCTGGGCTaGCAGGCACTGAGCCCCCAG | + |
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Preference number: 4 (lower is better) Translates to: LDQETLDPGLSGLLFPMPMEALG*QALSPQ Trigger: CTGGGGGCTCAGTGCCTGTCAGCCCAGGGCCTCCAT...TGGCATTGGGAAAAGCAAGCCAGAAAGGCCAGGATCTAGTGTCTCCTGGTCCAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027966.14 ENSMUST00000159969.8 |
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| CDS-3UTR CCA 90 bp | GCATCCCTTGGACCAGGAGACACTAGATCCTGGCCTTTCTGGCTTGCTTTTCCCCTGGACTTGGGCCCTTaGACAGTGATGGTGACAGGC | + |
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Preference number: 4 (lower is better) Translates to: ASLGPGDTRSWPFWLAFPLDLGP*TVMVTG Trigger: GCCTGTCACCATCACTGTCCAAGGGCCCAAGTCCAG...GGGAAAAGCAAGCCAGAAAGGCCAGGATCTAGTGTCTCCTGGTCCAAGGGATGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027966.14 ENSMUST00000081103.12 ENSMUST00000159969.8 |
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| CDS-3UTR TCA 90 bp | TTGGACCAGGAGACACTAGATCCTGGCCTTTCTGGCTTGCTTTTCCCAATGCCATCACCGTGTCTTCCTTaGGCACCTGGATCCACGGGG | + |
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Preference number: 4 (lower is better) Translates to: LDQETLDPGLSGLLFPMPSPCLP*APGSTG Trigger: CCCCGTGGATCCAGGTGCTCAAGGAAGACACGGTGA...TGGCATTGGGAAAAGCAAGCCAGAAAGGCCAGGATCTAGTGTCTCCTGGTCCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027966.14 ENSMUST00000081103.12 ENSMUST00000159969.8 |
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| CDS-3UTR CCA 90 bp | AAGAGTCTTCTCGCAGAAGACCAACAAACCCCAGAGAGCTCAGCCTATATTCCATGGCTCCAGTCCAGATaGAGGCCCTGGGCTGACAGG | + |
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Preference number: 4 (lower is better) Translates to: KSLLAEDQQTPESSAYIPWLQSR*RPWADR Trigger: CCTGTCAGCCCAGGGCCTCCATCTGGACTGGAGCCA...TGGAATATAGGCTGAGCTCTCTGGGGTTTGTTGGTCTTCTGCGAGAAGACTCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027966.14 |
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| CDS-3UTR TCA 90 bp | AAGAGTCTTCTCGCAGAAGACCAACAAACCCCAGAGAGCTCAGCCTATATTCCATCACCGTGTCTTCCTTaGGCACCTGGATCCACGGGG | + |
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Preference number: 4 (lower is better) Translates to: KSLLAEDQQTPESSAYIPSPCLP*APGSTG Trigger: CCCCGTGGATCCAGGTGCTCAAGGAAGACACGGTGA...TGGAATATAGGCTGAGCTCTCTGGGGTTTGTTGGTCTTCTGCGAGAAGACTCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027966.14 |
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| CDS-3UTR CCA 90 bp | CAGGAGACACTAGATCCTGGCCTTTCTGGCTTGCTTTTCCCAATGCCAAGGGAGGTCCGTGAGAACACATaGACAGTCCAGTTGCTCTCC | + |
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Preference number: 4 (lower is better) Translates to: QETLDPGLSGLLFPMPREVRENT*TVQLLS Trigger: GGAGAGCAACTGGACTGTCCATGTGTTCTCACGGAC...CTCCCTTGGCATTGGGAAAAGCAAGCCAGAAAGGCCAGGATCTAGTGTCTCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027966.14 ENSMUST00000081103.12 ENSMUST00000159969.8 |
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| CDS-3UTR CCA 90 bp | CAGGAGACACTAGATCCTGGCCTTTCTGGCTTGCTTTTCCCAATGCCAAGGGAGGTGACAGGCTTGGACTaGTGCAGTGTCCTTCCTAGA | + |
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Preference number: 4 (lower is better) Translates to: QETLDPGLSGLLFPMPREVTGLD*CSVLPR Trigger: TCTAGGAAGGACACTGCACCAGTCCAAGCCTGTCAC...CTCCCTTGGCATTGGGAAAAGCAAGCCAGAAAGGCCAGGATCTAGTGTCTCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027966.14 ENSMUST00000081103.12 ENSMUST00000159969.8 |
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| CDS-3UTR CCA 90 bp | CATCCCTTGGACCAGGAGACACTAGATCCTGGCCTTTCTGGCTTGCTTTTCCCAGTGACAGGCTTGGACTaGTGCAGTGTCCTTCCTAGA | + |
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Preference number: 4 (lower is better) Translates to: HPLDQETLDPGLSGLLFPVTGLD*CSVLPR Trigger: TCTAGGAAGGACACTGCACCAGTCCAAGCCTGTCAC...TGGGAAAAGCAAGCCAGAAAGGCCAGGATCTAGTGTCTCCTGGTCCAAGGGATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027966.14 ENSMUST00000081103.12 ENSMUST00000159969.8 |
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| CDS-3UTR CCA 90 bp | ACAGCATCCCTTGGACCAGGAGACACTAGATCCTGGCCTTTCTGGCTTGCTTTTCTGGTAAAGACCTGCTaGACTTGGGCCCTTGGACAG | + |
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Preference number: 4 (lower is better) Translates to: TASLGPGDTRSWPFWLAFLVKTC*TWALGQ Trigger: CTGTCCAAGGGCCCAAGTCCAGCAGGTCTTTACCAG...AAAAGCAAGCCAGAAAGGCCAGGATCTAGTGTCTCCTGGTCCAAGGGATGCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027966.14 ENSMUST00000081103.12 ENSMUST00000159969.8 |
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| CDS-3UTR CCA 90 bp | CATCCCTTGGACCAGGAGACACTAGATCCTGGCCTTTCTGGCTTGCTTTTCCCAGTGATCAGGGTTTCCTaGGAGAGCTGGAACCTGCTT | + |
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Preference number: 4 (lower is better) Translates to: HPLDQETLDPGLSGLLFPVIRVS*ESWNLL Trigger: AAGCAGGTTCCAGCTCTCCCAGGAAACCCTGATCAC...TGGGAAAAGCAAGCCAGAAAGGCCAGGATCTAGTGTCTCCTGGTCCAAGGGATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027966.14 ENSMUST00000159969.8 |
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| CDS-3UTR CCA 90 bp | TTGGACCAGGAGACACTAGATCCTGGCCTTTCTGGCTTGCTTTTCCCAATGCCACCATTGTGGAACCACTaGGTAGAAGAGTTCCCAGGG | + |
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Preference number: 4 (lower is better) Translates to: LDQETLDPGLSGLLFPMPPLWNH*VEEFPG Trigger: CCCTGGGAACTCTTCTACCCAGTGGTTCCACAATGG...TGGCATTGGGAAAAGCAAGCCAGAAAGGCCAGGATCTAGTGTCTCCTGGTCCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027966.14 ENSMUST00000081103.12 ENSMUST00000159969.8 |
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| CDS-3UTR CCA 90 bp | CATCCCTTGGACCAGGAGACACTAGATCCTGGCCTTTCTGGCTTGCTTTTCCCAATGGACCTCCCATTGTaGAACCACTGGGTAGAAGAG | + |
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Preference number: 4 (lower is better) Translates to: HPLDQETLDPGLSGLLFPMDLPL*NHWVEE Trigger: CTCTTCTACCCAGTGGTTCCACAATGGGAGGTCCAT...TGGGAAAAGCAAGCCAGAAAGGCCAGGATCTAGTGTCTCCTGGTCCAAGGGATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027966.14 ENSMUST00000081103.12 ENSMUST00000159969.8 |
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| CDS-3UTR CCA 90 bp | TTGGACCAGGAGACACTAGATCCTGGCCTTTCTGGCTTGCTTTTCCCAATGCCAGTGACAGGCTTGGACTaGTGCAGTGTCCTTCCTAGA | + |
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Preference number: 4 (lower is better) Translates to: LDQETLDPGLSGLLFPMPVTGLD*CSVLPR Trigger: TCTAGGAAGGACACTGCACCAGTCCAAGCCTGTCAC...TGGCATTGGGAAAAGCAAGCCAGAAAGGCCAGGATCTAGTGTCTCCTGGTCCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027966.14 ENSMUST00000081103.12 ENSMUST00000159969.8 |
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| CDS-3UTR CCA 90 bp | GCATCCCTTGGACCAGGAGACACTAGATCCTGGCCTTTCTGGCTTGCTTTTCCCGTTTCCTGGGAGAGCTaGAACCTGCTTTTTCTTGAG | + |
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Preference number: 4 (lower is better) Translates to: ASLGPGDTRSWPFWLAFPVSWES*NLLFLE Trigger: CTCAAGAAAAAGCAGGTTCCAGCTCTCCCAGGAAAC...GGGAAAAGCAAGCCAGAAAGGCCAGGATCTAGTGTCTCCTGGTCCAAGGGATGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027966.14 ENSMUST00000159969.8 |
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| CDS-3UTR CCA 90 bp | CTTGGACCAGGAGACACTAGATCCTGGCCTTTCTGGCTTGCTTTTCCCAATGCCGTCCACAGTAGCATATaGCACAAAGTCCGTGAGAAC | + |
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Preference number: 4 (lower is better) Translates to: LGPGDTRSWPFWLAFPNAVHSSI*HKVREN Trigger: GTTCTCACGGACTTTGTGCCATATGCTACTGTGGAC...GGCATTGGGAAAAGCAAGCCAGAAAGGCCAGGATCTAGTGTCTCCTGGTCCAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027966.14 ENSMUST00000081103.12 ENSMUST00000159969.8 |
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| CDS-3UTR CCA 90 bp | CATCCCTTGGACCAGGAGACACTAGATCCTGGCCTTTCTGGCTTGCTTTTCCCAGTTTCCTGGGAGAGCTaGAACCTGCTTTTTCTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: HPLDQETLDPGLSGLLFPVSWES*NLLFLE Trigger: CTCAAGAAAAAGCAGGTTCCAGCTCTCCCAGGAAAC...TGGGAAAAGCAAGCCAGAAAGGCCAGGATCTAGTGTCTCCTGGTCCAAGGGATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027966.14 ENSMUST00000159969.8 |
||
| CDS-3UTR CCA 90 bp | CAGGAGACACTAGATCCTGGCCTTTCTGGCTTGCTTTTCCCAATGCCAAGGGAGTCTCAGCCTCAGTTTTaGCAGCTTCTTCCAGATCAG | + |
|
Preference number: 4 (lower is better) Translates to: QETLDPGLSGLLFPMPRESQPQF*QLLPDQ Trigger: CTGATCTGGAAGAAGCTGCCAAAACTGAGGCTGAGA...CTCCCTTGGCATTGGGAAAAGCAAGCCAGAAAGGCCAGGATCTAGTGTCTCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027966.14 ENSMUST00000081103.12 ENSMUST00000159969.8 |
||
| CDS-3UTR TCA 90 bp | TTGGACCAGGAGACACTAGATCCTGGCCTTTCTGGCTTGCTTTTCCCAATGCCAGCCTTTGGAAGATCATaGGTCCCAGCAGCAAGATTT | + |
|
Preference number: 4 (lower is better) Translates to: LDQETLDPGLSGLLFPMPAFGRS*VPAARF Trigger: AAATCTTGCTGCTGGGACTCATGATCTTCCAAAGGC...TGGCATTGGGAAAAGCAAGCCAGAAAGGCCAGGATCTAGTGTCTCCTGGTCCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027966.14 ENSMUST00000081103.12 ENSMUST00000159969.8 |
||
| CDS-3UTR CCA 90 bp | ACAGCATCCCTTGGACCAGGAGACACTAGATCCTGGCCTTTCTGGCTTGCTTTTTCTCAGCCTCAGTTTTaGCAGCTTCTTCCAGATCAG | + |
|
Preference number: 4 (lower is better) Translates to: TASLGPGDTRSWPFWLAFSQPQF*QLLPDQ Trigger: CTGATCTGGAAGAAGCTGCCAAAACTGAGGCTGAGA...AAAAGCAAGCCAGAAAGGCCAGGATCTAGTGTCTCCTGGTCCAAGGGATGCTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027966.14 ENSMUST00000081103.12 ENSMUST00000159969.8 |
||
| CDS-3UTR CCA 90 bp | GGACTCACAGAAGTGACTCTGGATGTTTTCTTTAATATCTACAGCATCCCTTGGCTGGACTTGGGCCCTTaGACAGTGATGGTGACAGGC | + |
|
Preference number: 4 (lower is better) Translates to: GLTEVTLDVFFNIYSIPWLDLGP*TVMVTG Trigger: GCCTGTCACCATCACTGTCCAAGGGCCCAAGTCCAG...CCAAGGGATGCTGTAGATATTAAAGAAAACATCCAGAGTCACTTCTGTGAGTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027966.14 ENSMUST00000081103.12 ENSMUST00000159969.8 |
||
| CDS-3UTR CCA 90 bp | GTTTCAGGACTCACAGAAGTGACTCTGGATGTTTTCTTTAATATCTACAGCATCTGGCTCCAGTCCAGATaGAGGCCCTGGGCTGACAGG | + |
|
Preference number: 4 (lower is better) Translates to: VSGLTEVTLDVFFNIYSIWLQSR*RPWADR Trigger: CCTGTCAGCCCAGGGCCTCCATCTGGACTGGAGCCA...GATGCTGTAGATATTAAAGAAAACATCCAGAGTCACTTCTGTGAGTCCTGAAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027966.14 ENSMUST00000159969.8 |
||
| 3UTR CAA 72 bp | AAGATCCACACAAGGATGGACCCGTGCAACCACGGCTaGGTTATCAGAGAGTTCAAAGCAGAAATTCTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: KIHTRMDPCNHG*VIREFKAEILE Trigger: CTCCAGAATTTCTGCTTTGAACTCTCTGATAACCAAGCCGTGGTTGCACGGGTCCATCCTTGTGTGGATCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027966.14 |
||
| CDS-3UTR CCA 90 bp | TATCTTAGCGTGAATTATAAGCAGTTCCCACGTTGCTGCAGTCTCTTAACGGCACCATTGTGGAACCACTaGGTAGAAGAGTTCCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: YLSVNYKQFPRCCSLLTAPLWNH*VEEFPG Trigger: CCCTGGGAACTCTTCTACCCAGTGGTTCCACAATGG...TGCCGTTAAGAGACTGCAGCAACGTGGGAACTGCTTATAATTCACGCTAAGATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027966.14 ENSMUST00000081103.12 |
||
| CDS-3UTR CCA 90 bp | GGACTCACAGAAGTGACTCTGGATGTTTTCTTTAATATCTACAGCATCCCTTGGCTGGTAAAGACCTGCTaGACTTGGGCCCTTGGACAG | + |
|
Preference number: 4 (lower is better) Translates to: GLTEVTLDVFFNIYSIPWLVKTC*TWALGQ Trigger: CTGTCCAAGGGCCCAAGTCCAGCAGGTCTTTACCAG...CCAAGGGATGCTGTAGATATTAAAGAAAACATCCAGAGTCACTTCTGTGAGTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027966.14 ENSMUST00000081103.12 ENSMUST00000159969.8 |
||
| CDS-3UTR CCA 90 bp | TGTCTGTTGGTTTCAGGACTCACAGAAGTGACTCTGGATGTTTTCTTTAATATCCTGGACTTGGGCCCTTaGACAGTGATGGTGACAGGC | + |
|
Preference number: 4 (lower is better) Translates to: CLLVSGLTEVTLDVFFNILDLGP*TVMVTG Trigger: GCCTGTCACCATCACTGTCCAAGGGCCCAAGTCCAG...GATATTAAAGAAAACATCCAGAGTCACTTCTGTGAGTCCTGAAACCAACAGACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027966.14 ENSMUST00000081103.12 ENSMUST00000159969.8 |
||
| CDS-3UTR GCA 90 bp | CTCACAGAAGTGACTCTGGATGTTTTCTTTAATATCTACAGCATCCCTTGGACCCATGGACAGTCCAGTTaGTCTCCATGGGGATCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: LTEVTLDVFFNIYSIPWTHGQSS*SPWGSV Trigger: TACTGATCCCCATGGAGAGCAACTGGACTGTCCATG...GGTCCAAGGGATGCTGTAGATATTAAAGAAAACATCCAGAGTCACTTCTGTGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027966.14 ENSMUST00000081103.12 ENSMUST00000159969.8 |
||
| CDS-3UTR CCA 90 bp | AACCCCAGAGAGCTCAGCCTATATTCCAATCATTGCAGCCTTGAAAAAGTAAATGTCCGTGAGAACACATaGACAGTCCAGTTGCTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: NPRELSLYSNHCSLEKVNVRENT*TVQLLS Trigger: GGAGAGCAACTGGACTGTCCATGTGTTCTCACGGAC...ATTTACTTTTTCAAGGCTGCAATGATTGGAATATAGGCTGAGCTCTCTGGGGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027966.14 |
||
| CDS-3UTR CCA 90 bp | TATCTTAGCGTGAATTATAAGCAGTTCCCACGTTGCTGCAGTCTCTTAACGGCAGTCCACAGTAGCATATaGCACAAAGTCCGTGAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: YLSVNYKQFPRCCSLLTAVHSSI*HKVREN Trigger: GTTCTCACGGACTTTGTGCCATATGCTACTGTGGAC...TGCCGTTAAGAGACTGCAGCAACGTGGGAACTGCTTATAATTCACGCTAAGATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027966.14 ENSMUST00000081103.12 |
||
| CDS-3UTR CCA 90 bp | CTCACAGAAGTGACTCTGGATGTTTTCTTTAATATCTACAGCATCCCTTGGACCATGGACCTCCCATTGTaGAACCACTGGGTAGAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: LTEVTLDVFFNIYSIPWTMDLPL*NHWVEE Trigger: CTCTTCTACCCAGTGGTTCCACAATGGGAGGTCCAT...GGTCCAAGGGATGCTGTAGATATTAAAGAAAACATCCAGAGTCACTTCTGTGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027966.14 ENSMUST00000081103.12 ENSMUST00000159969.8 |
||
| CDS-3UTR CCA 90 bp | TGTCTGTTGGTTTCAGGACTCACAGAAGTGACTCTGGATGTTTTCTTTAATATCCTGGTAAAGACCTGCTaGACTTGGGCCCTTGGACAG | + |
|
Preference number: 4 (lower is better) Translates to: CLLVSGLTEVTLDVFFNILVKTC*TWALGQ Trigger: CTGTCCAAGGGCCCAAGTCCAGCAGGTCTTTACCAG...GATATTAAAGAAAACATCCAGAGTCACTTCTGTGAGTCCTGAAACCAACAGACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027966.14 ENSMUST00000081103.12 ENSMUST00000159969.8 |
||
| CDS-3UTR TCA 90 bp | GGACTCACAGAAGTGACTCTGGATGTTTTCTTTAATATCTACAGCATCCCTTGGGCCTTTGGAAGATCATaGGTCCCAGCAGCAAGATTT | + |
|
Preference number: 4 (lower is better) Translates to: GLTEVTLDVFFNIYSIPWAFGRS*VPAARF Trigger: AAATCTTGCTGCTGGGACTCATGATCTTCCAAAGGC...CCAAGGGATGCTGTAGATATTAAAGAAAACATCCAGAGTCACTTCTGTGAGTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027966.14 ENSMUST00000081103.12 ENSMUST00000159969.8 |
||
| CDS-3UTR CCA 90 bp | GTTTCAGGACTCACAGAAGTGACTCTGGATGTTTTCTTTAATATCTACAGCATCGTCCGTGAGAACACATaGACAGTCCAGTTGCTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: VSGLTEVTLDVFFNIYSIVRENT*TVQLLS Trigger: GGAGAGCAACTGGACTGTCCATGTGTTCTCACGGAC...GATGCTGTAGATATTAAAGAAAACATCCAGAGTCACTTCTGTGAGTCCTGAAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027966.14 ENSMUST00000081103.12 ENSMUST00000159969.8 |
||
| CDS-3UTR CCA 90 bp | GTTTCAGGACTCACAGAAGTGACTCTGGATGTTTTCTTTAATATCTACAGCATCCCATTGTGGAACCACTaGGTAGAAGAGTTCCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: VSGLTEVTLDVFFNIYSIPLWNH*VEEFPG Trigger: CCCTGGGAACTCTTCTACCCAGTGGTTCCACAATGG...GATGCTGTAGATATTAAAGAAAACATCCAGAGTCACTTCTGTGAGTCCTGAAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027966.14 ENSMUST00000081103.12 ENSMUST00000159969.8 |
||
| CDS-3UTR CCA 90 bp | GTTTCAGGACTCACAGAAGTGACTCTGGATGTTTTCTTTAATATCTACAGCATCGTGATCAGGGTTTCCTaGGAGAGCTGGAACCTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: VSGLTEVTLDVFFNIYSIVIRVS*ESWNLL Trigger: AAGCAGGTTCCAGCTCTCCCAGGAAACCCTGATCAC...GATGCTGTAGATATTAAAGAAAACATCCAGAGTCACTTCTGTGAGTCCTGAAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027966.14 ENSMUST00000159969.8 |
||
| CDS-3UTR CCA 90 bp | GAAGTGACTCTGGATGTTTTCTTTAATATCTACAGCATCCCTTGGACCAGGAGACTCACCTACTTCCTCTaGAAGGGTTTCTCCCATTTC | + |
|
Preference number: 4 (lower is better) Translates to: EVTLDVFFNIYSIPWTRRLTYFL*KGFSHF Trigger: GAAATGGGAGAAACCCTTCCAGAGGAAGTAGGTGAG...TCTCCTGGTCCAAGGGATGCTGTAGATATTAAAGAAAACATCCAGAGTCACTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027966.14 ENSMUST00000159969.8 |
||
| CDS-3UTR GCA 90 bp | GTTTCAGGACTCACAGAAGTGACTCTGGATGTTTTCTTTAATATCTACAGCATCCATGGACAGTCCAGTTaGTCTCCATGGGGATCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: VSGLTEVTLDVFFNIYSIHGQSS*SPWGSV Trigger: TACTGATCCCCATGGAGAGCAACTGGACTGTCCATG...GATGCTGTAGATATTAAAGAAAACATCCAGAGTCACTTCTGTGAGTCCTGAAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027966.14 ENSMUST00000081103.12 ENSMUST00000159969.8 |
||
| CDS-3UTR CCA 90 bp | AACCCCAGAGAGCTCAGCCTATATTCCAATCATTGCAGCCTTGAAAAAGTAAATTCTCAGCCTCAGTTTTaGCAGCTTCTTCCAGATCAG | + |
|
Preference number: 4 (lower is better) Translates to: NPRELSLYSNHCSLEKVNSQPQF*QLLPDQ Trigger: CTGATCTGGAAGAAGCTGCCAAAACTGAGGCTGAGA...ATTTACTTTTTCAAGGCTGCAATGATTGGAATATAGGCTGAGCTCTCTGGGGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000027966.14 |
||
| CDS-3UTR TCA 90 bp | GTTTCAGGACTCACAGAAGTGACTCTGGATGTTTTCTTTAATATCTACAGCATCGCCTTTGGAAGATCATaGGTCCCAGCAGCAAGATTT | + |
|
Preference number: 4 (lower is better) Translates to: VSGLTEVTLDVFFNIYSIAFGRS*VPAARF Trigger: AAATCTTGCTGCTGGGACTCATGATCTTCCAAAGGC...GATGCTGTAGATATTAAAGAAAACATCCAGAGTCACTTCTGTGAGTCCTGAAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027966.14 ENSMUST00000081103.12 ENSMUST00000159969.8 |
||
| CDS-3UTR CCA 90 bp | AACATTAATTGTTCTCCTTATCTTAGCGTGAATTATAAGCAGTTCCCACGTTGCATGGACCTCCCATTGTaGAACCACTGGGTAGAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: NINCSPYLSVNYKQFPRCMDLPL*NHWVEE Trigger: CTCTTCTACCCAGTGGTTCCACAATGGGAGGTCCAT...GCAACGTGGGAACTGCTTATAATTCACGCTAAGATAAGGAGAACAATTAATGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027966.14 ENSMUST00000081103.12 |
||
| CDS-3UTR CCA 90 bp | TGTCTGTTGGTTTCAGGACTCACAGAAGTGACTCTGGATGTTTTCTTTAATATCCTCACCTACTTCCTCTaGAAGGGTTTCTCCCATTTC | + |
|
Preference number: 4 (lower is better) Translates to: CLLVSGLTEVTLDVFFNILTYFL*KGFSHF Trigger: GAAATGGGAGAAACCCTTCCAGAGGAAGTAGGTGAG...GATATTAAAGAAAACATCCAGAGTCACTTCTGTGAGTCCTGAAACCAACAGACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027966.14 ENSMUST00000159969.8 |
||
| CDS-3UTR CCA 90 bp | GGACTCACAGAAGTGACTCTGGATGTTTTCTTTAATATCTACAGCATCCCTTGGATCAGGAGGATTGTCTaGAACCTGCTTTTTCTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: GLTEVTLDVFFNIYSIPWIRRIV*NLLFLE Trigger: CTCAAGAAAAAGCAGGTTCCAGACAATCCTCCTGAT...CCAAGGGATGCTGTAGATATTAAAGAAAACATCCAGAGTCACTTCTGTGAGTCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000081103.12 |
||
| CDS-3UTR CCA 90 bp | GGACTCACAGAAGTGACTCTGGATGTTTTCTTTAATATCTACAGCATCCCTTGGACTGTGGTTGGCTTTTaGGATAGAGAAATTACTACT | + |
|
Preference number: 4 (lower is better) Translates to: GLTEVTLDVFFNIYSIPWTVVGF*DREITT Trigger: AGTAGTAATTTCTCTATCCCAAAAGCCAACCACAGT...CCAAGGGATGCTGTAGATATTAAAGAAAACATCCAGAGTCACTTCTGTGAGTCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027966.14 ENSMUST00000081103.12 ENSMUST00000159969.8 |
||
| CDS-3UTR CCA 90 bp | GTTTCAGGACTCACAGAAGTGACTCTGGATGTTTTCTTTAATATCTACAGCATCACTGTGGTTGGCTTTTaGGATAGAGAAATTACTACT | + |
|
Preference number: 4 (lower is better) Translates to: VSGLTEVTLDVFFNIYSITVVGF*DREITT Trigger: AGTAGTAATTTCTCTATCCCAAAAGCCAACCACAGT...GATGCTGTAGATATTAAAGAAAACATCCAGAGTCACTTCTGTGAGTCCTGAAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027966.14 ENSMUST00000081103.12 ENSMUST00000159969.8 |
||
| CDS-3UTR CCA 90 bp | AACATTAATTGTTCTCCTTATCTTAGCGTGAATTATAAGCAGTTCCCACGTTGCACTGTGGTTGGCTTTTaGGATAGAGAAATTACTACT | + |
|
Preference number: 4 (lower is better) Translates to: NINCSPYLSVNYKQFPRCTVVGF*DREITT Trigger: AGTAGTAATTTCTCTATCCCAAAAGCCAACCACAGT...GCAACGTGGGAACTGCTTATAATTCACGCTAAGATAAGGAGAACAATTAATGTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027966.14 ENSMUST00000081103.12 |
||
| CDS-3UTR CAA 90 bp | GTCTGTCCTCTCCTCTACCTCCTATCTACTGCTACCAGGCCAGGTGTGGTGGTGAAACGTGTAGCTGGCTaGGACCTGGCTCCGGATGGA | + |
|
Preference number: 5 (lower is better) Translates to: VCPLLYLLSTATRPGVVVKRVAG*DLAPDG Trigger: TCCATCCGGAGCCAGGTCCAAGCCAGCTACACGTTT...CACCACCACACCTGGCCTGGTAGCAGTAGATAGGAGGTAGAGGAGAGGACAGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027966.14 |
||
| CDS CCA 90 bp | CTCAGCCTCAGTTTTGGCAGCTTCTTCCAGATCAGGAGGATTGTATaGGCTGCTGCTTGTTGGCTCCAGTCCAGATGGAGGCCCTGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: LSLSFGSFFQIRRIV*AAACWLQSRWRPWA Trigger: AGCCCAGGGCCTCCATCTGGACTGGAGCCAACAAGCAGCAGCCCATACAATCCTCCTGATCTGGAAGAAGCTGCCAAAACTGAGGCTGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027966.14 ENSMUST00000159969.8 |
||
| CDS-3UTR CAA 90 bp | GCATCCCTTGGACCAGGAGACACTAGATCCTGGCCTTTCTGGCTTGCTTTTCCCGAAGAGTTCCCAGGGTaGTGGGTCCCTTCGCATGTC | + |
|
Preference number: 5 (lower is better) Translates to: ASLGPGDTRSWPFWLAFPEEFPG*WVPSHV Trigger: GACATGCGAAGGGACCCACAACCCTGGGAACTCTTC...GGGAAAAGCAAGCCAGAAAGGCCAGGATCTAGTGTCTCCTGGTCCAAGGGATGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027966.14 ENSMUST00000081103.12 ENSMUST00000159969.8 |
||
| CDS-3UTR CAA 90 bp | GTCTGTCCTCTCCTCTACCTCCTATCTACTGCTACCAGGCCAGGTGTGGTGGTGGTGATGGTGACAGGCTaGGACTGGTGCAGTGTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: VCPLLYLLSTATRPGVVVVMVTG*DWCSVL Trigger: AAGGACACTGCACCAGTCCAAGCCTGTCACCATCAC...CACCACCACACCTGGCCTGGTAGCAGTAGATAGGAGGTAGAGGAGAGGACAGAC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027966.14 |
||
| CDS-3UTR CAA 90 bp | CCATCTCCCCAAGAGTCTTCTCGCAGAAGACCAACAAACCCCAGAGAGCTCAGCAAAGACCTGCTGGACTaGGGCCCTTGGACAGTGATG | + |
|
Preference number: 5 (lower is better) Translates to: PSPQESSRRRPTNPRELSKDLLD*GPWTVM Trigger: CATCACTGTCCAAGGGCCCAAGTCCAGCAGGTCTTT...GCTGAGCTCTCTGGGGTTTGTTGGTCTTCTGCGAGAAGACTCTTGGGGAGATGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027966.14 |
||
| CDS-3UTR CAA 90 bp | GCATCCCTTGGACCAGGAGACACTAGATCCTGGCCTTTCTGGCTTGCTTTTCCCAAAGACCTGCTGGACTaGGGCCCTTGGACAGTGATG | + |
|
Preference number: 5 (lower is better) Translates to: ASLGPGDTRSWPFWLAFPKDLLD*GPWTVM Trigger: CATCACTGTCCAAGGGCCCAAGTCCAGCAGGTCTTT...GGGAAAAGCAAGCCAGAAAGGCCAGGATCTAGTGTCTCCTGGTCCAAGGGATGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027966.14 ENSMUST00000081103.12 ENSMUST00000159969.8 |
||
| CDS-3UTR CAA 90 bp | TCTACAGCATCCCTTGGACCAGGAGACACTAGATCCTGGCCTTTCTGGCTTGCTATGGGCTGCTGCTTGTaGGCTCCAGTCCAGATGGAG | + |
|
Preference number: 5 (lower is better) Translates to: STASLGPGDTRSWPFWLAMGCCL*APVQME Trigger: CTCCATCTGGACTGGAGCCAACAAGCAGCAGCCCAT...AGCAAGCCAGAAAGGCCAGGATCTAGTGTCTCCTGGTCCAAGGGATGCTGTAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027966.14 ENSMUST00000159969.8 |
||
| CDS CCA 90 bp | ACGGCTGTCCACAGTAGCATATGGCACAAAGTCCGTGAGAACACATaGACAGTCCAGTTGCTCTCCATGGGGATCAGTAGGAACGGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: TAVHSSIWHKVRENT*TVQLLSMGISRNGR Trigger: CCTGCCGTTCCTACTGATCCCCATGGAGAGCAACTGGACTGTCCATGTGTTCTCACGGACTTTGTGCCATATGCTACTGTGGACAGCCGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027966.14 ENSMUST00000081103.12 ENSMUST00000159688.2 ENSMUST00000159969.8 |
||
| CDS-3UTR CAA 90 bp | ACAGCATCCCTTGGACCAGGAGACACTAGATCCTGGCCTTTCTGGCTTGCTTTTGAAGAGTTCCCAGGGTaGTGGGTCCCTTCGCATGTC | + |
|
Preference number: 5 (lower is better) Translates to: TASLGPGDTRSWPFWLAFEEFPG*WVPSHV Trigger: GACATGCGAAGGGACCCACAACCCTGGGAACTCTTC...AAAAGCAAGCCAGAAAGGCCAGGATCTAGTGTCTCCTGGTCCAAGGGATGCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027966.14 ENSMUST00000081103.12 ENSMUST00000159969.8 |
||
| CDS-3UTR CAA 90 bp | GCATCCCTTGGACCAGGAGACACTAGATCCTGGCCTTTCTGGCTTGCTTTTCCCGCGGGTCTGCTCCATTaGACACCGATATTCTCCACT | + |
|
Preference number: 5 (lower is better) Translates to: ASLGPGDTRSWPFWLAFPAGLLH*TPIFST Trigger: AGTGGAGAATATCGGTGTCAAATGGAGCAGACCCGC...GGGAAAAGCAAGCCAGAAAGGCCAGGATCTAGTGTCTCCTGGTCCAAGGGATGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027966.14 ENSMUST00000081103.12 ENSMUST00000159969.8 |
||
| CDS-3UTR CAA 90 bp | TCTACAGCATCCCTTGGACCAGGAGACACTAGATCCTGGCCTTTCTGGCTTGCTGTGATGGTGACAGGCTaGGACTGGTGCAGTGTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: STASLGPGDTRSWPFWLAVMVTG*DWCSVL Trigger: AAGGACACTGCACCAGTCCAAGCCTGTCACCATCAC...AGCAAGCCAGAAAGGCCAGGATCTAGTGTCTCCTGGTCCAAGGGATGCTGTAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027966.14 ENSMUST00000081103.12 ENSMUST00000159969.8 |
||
| CDS-3UTR CAA 90 bp | CTTGGACCAGGAGACACTAGATCCTGGCCTTTCTGGCTTGCTTTTCCCAATGCCGTGATGGTGACAGGCTaGGACTGGTGCAGTGTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: LGPGDTRSWPFWLAFPNAVMVTG*DWCSVL Trigger: AAGGACACTGCACCAGTCCAAGCCTGTCACCATCAC...GGCATTGGGAAAAGCAAGCCAGAAAGGCCAGGATCTAGTGTCTCCTGGTCCAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027966.14 ENSMUST00000081103.12 ENSMUST00000159969.8 |
||
| CDS-3UTR CAA 90 bp | TCTACAGCATCCCTTGGACCAGGAGACACTAGATCCTGGCCTTTCTGGCTTGCTTGTATGGGCTGCTGCTaGTTGGCTCCAGTCCAGATG | + |
|
Preference number: 5 (lower is better) Translates to: STASLGPGDTRSWPFWLACMGCC*LAPVQM Trigger: CATCTGGACTGGAGCCAACAAGCAGCAGCCCATACA...AGCAAGCCAGAAAGGCCAGGATCTAGTGTCTCCTGGTCCAAGGGATGCTGTAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027966.14 ENSMUST00000159969.8 |
||
| CDS-3UTR CAA 90 bp | CAGGAGACACTAGATCCTGGCCTTTCTGGCTTGCTTTTCCCAATGCCAAGGGAGTGTATGGGCTGCTGCTaGTTGGCTCCAGTCCAGATG | + |
|
Preference number: 5 (lower is better) Translates to: QETLDPGLSGLLFPMPRECMGCC*LAPVQM Trigger: CATCTGGACTGGAGCCAACAAGCAGCAGCCCATACA...CTCCCTTGGCATTGGGAAAAGCAAGCCAGAAAGGCCAGGATCTAGTGTCTCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027966.14 ENSMUST00000159969.8 |
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| CDS-3UTR CAA 90 bp | TCTACAGCATCCCTTGGACCAGGAGACACTAGATCCTGGCCTTTCTGGCTTGCTGCGGGTCTGCTCCATTaGACACCGATATTCTCCACT | + |
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Preference number: 5 (lower is better) Translates to: STASLGPGDTRSWPFWLAAGLLH*TPIFST Trigger: AGTGGAGAATATCGGTGTCAAATGGAGCAGACCCGC...AGCAAGCCAGAAAGGCCAGGATCTAGTGTCTCCTGGTCCAAGGGATGCTGTAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027966.14 ENSMUST00000081103.12 ENSMUST00000159969.8 |
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| CDS-3UTR CAA 90 bp | GCATCCCTTGGACCAGGAGACACTAGATCCTGGCCTTTCTGGCTTGCTTTTCCCTATTCTCCACTGTCATaGACTGTGGCCTTAAACGTG | + |
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Preference number: 5 (lower is better) Translates to: ASLGPGDTRSWPFWLAFPYSPLS*TVALNV Trigger: CACGTTTAAGGCCACAGTCAATGACAGTGGAGAATA...GGGAAAAGCAAGCCAGAAAGGCCAGGATCTAGTGTCTCCTGGTCCAAGGGATGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027966.14 ENSMUST00000081103.12 ENSMUST00000159969.8 |
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| CDS-3UTR CAA 90 bp | CATCCCTTGGACCAGGAGACACTAGATCCTGGCCTTTCTGGCTTGCTTTTCCCATTCTCAGCCTCAGTTTaGGCAGCTTCTTCCAGATCA | + |
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Preference number: 5 (lower is better) Translates to: HPLDQETLDPGLSGLLFPFSASV*AASSRS Trigger: TGATCTGGAAGAAGCTGCCAAAACTGAGGCTGAGAA...TGGGAAAAGCAAGCCAGAAAGGCCAGGATCTAGTGTCTCCTGGTCCAAGGGATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027966.14 ENSMUST00000081103.12 ENSMUST00000159969.8 |
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| CDS-3UTR CAA 90 bp | CAGGAGACACTAGATCCTGGCCTTTCTGGCTTGCTTTTCCCAATGCCAAGGGAGTTCTCAGCCTCAGTTTaGGCAGCTTCTTCCAGATCA | + |
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Preference number: 5 (lower is better) Translates to: QETLDPGLSGLLFPMPREFSASV*AASSRS Trigger: TGATCTGGAAGAAGCTGCCAAAACTGAGGCTGAGAA...CTCCCTTGGCATTGGGAAAAGCAAGCCAGAAAGGCCAGGATCTAGTGTCTCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027966.14 ENSMUST00000081103.12 ENSMUST00000159969.8 |
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| CDS-3UTR CAA 90 bp | TATCTTAGCGTGAATTATAAGCAGTTCCCACGTTGCTGCAGTCTCTTAACGGCAATGGGCTGCTGCTTGTaGGCTCCAGTCCAGATGGAG | + |
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Preference number: 5 (lower is better) Translates to: YLSVNYKQFPRCCSLLTAMGCCL*APVQME Trigger: CTCCATCTGGACTGGAGCCAACAAGCAGCAGCCCAT...TGCCGTTAAGAGACTGCAGCAACGTGGGAACTGCTTATAATTCACGCTAAGATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027966.14 |
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| CDS-3UTR CAA 90 bp | GAAGTGACTCTGGATGTTTTCTTTAATATCTACAGCATCCCTTGGACCAGGAGAAAACGTGTAGCTGGCTaGGACCTGGCTCCGGATGGA | + |
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Preference number: 5 (lower is better) Translates to: EVTLDVFFNIYSIPWTRRKRVAG*DLAPDG Trigger: TCCATCCGGAGCCAGGTCCAAGCCAGCTACACGTTT...TCTCCTGGTCCAAGGGATGCTGTAGATATTAAAGAAAACATCCAGAGTCACTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027966.14 ENSMUST00000081103.12 ENSMUST00000159969.8 |
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| CDS-3UTR CAA 90 bp | GGACTCACAGAAGTGACTCTGGATGTTTTCTTTAATATCTACAGCATCCCTTGGCGGATGGACCTCCCATaGTGGAACCACTGGGTAGAA | + |
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Preference number: 5 (lower is better) Translates to: GLTEVTLDVFFNIYSIPWRMDLP*WNHWVE Trigger: TTCTACCCAGTGGTTCCACAATGGGAGGTCCATCCG...CCAAGGGATGCTGTAGATATTAAAGAAAACATCCAGAGTCACTTCTGTGAGTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027966.14 ENSMUST00000081103.12 ENSMUST00000159969.8 |
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| CDS-3UTR CAA 90 bp | AACCCCAGAGAGCTCAGCCTATATTCCAATCATTGCAGCCTTGAAAAAGTAAATCGGATGGACCTCCCATaGTGGAACCACTGGGTAGAA | + |
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Preference number: 5 (lower is better) Translates to: NPRELSLYSNHCSLEKVNRMDLP*WNHWVE Trigger: TTCTACCCAGTGGTTCCACAATGGGAGGTCCATCCG...ATTTACTTTTTCAAGGCTGCAATGATTGGAATATAGGCTGAGCTCTCTGGGGTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027966.14 |
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| CDS-3UTR CAA 90 bp | TGTCTGTTGGTTTCAGGACTCACAGAAGTGACTCTGGATGTTTTCTTTAATATCAAACGTGTAGCTGGCTaGGACCTGGCTCCGGATGGA | + |
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Preference number: 5 (lower is better) Translates to: CLLVSGLTEVTLDVFFNIKRVAG*DLAPDG Trigger: TCCATCCGGAGCCAGGTCCAAGCCAGCTACACGTTT...GATATTAAAGAAAACATCCAGAGTCACTTCTGTGAGTCCTGAAACCAACAGACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027966.14 ENSMUST00000081103.12 ENSMUST00000159969.8 |
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| CDS-3UTR CAA 90 bp | GTTTCAGGACTCACAGAAGTGACTCTGGATGTTTTCTTTAATATCTACAGCATCCGGATGGACCTCCCATaGTGGAACCACTGGGTAGAA | + |
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Preference number: 5 (lower is better) Translates to: VSGLTEVTLDVFFNIYSIRMDLP*WNHWVE Trigger: TTCTACCCAGTGGTTCCACAATGGGAGGTCCATCCG...GATGCTGTAGATATTAAAGAAAACATCCAGAGTCACTTCTGTGAGTCCTGAAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027966.14 ENSMUST00000081103.12 ENSMUST00000159969.8 |
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| CDS-3UTR CAA 90 bp | TGTCTGTTGGTTTCAGGACTCACAGAAGTGACTCTGGATGTTTTCTTTAATATCGCGGGTCTGCTCCATTaGACACCGATATTCTCCACT | + |
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Preference number: 5 (lower is better) Translates to: CLLVSGLTEVTLDVFFNIAGLLH*TPIFST Trigger: AGTGGAGAATATCGGTGTCAAATGGAGCAGACCCGC...GATATTAAAGAAAACATCCAGAGTCACTTCTGTGAGTCCTGAAACCAACAGACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027966.14 ENSMUST00000081103.12 ENSMUST00000159969.8 |
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| CDS-3UTR CAA 90 bp | AACATTAATTGTTCTCCTTATCTTAGCGTGAATTATAAGCAGTTCCCACGTTGCAAAGACCTGCTGGACTaGGGCCCTTGGACAGTGATG | + |
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Preference number: 5 (lower is better) Translates to: NINCSPYLSVNYKQFPRCKDLLD*GPWTVM Trigger: CATCACTGTCCAAGGGCCCAAGTCCAGCAGGTCTTT...GCAACGTGGGAACTGCTTATAATTCACGCTAAGATAAGGAGAACAATTAATGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027966.14 ENSMUST00000081103.12 |
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| CDS-3UTR CAA 90 bp | CTCACAGAAGTGACTCTGGATGTTTTCTTTAATATCTACAGCATCCCTTGGACCTTCTCAGCCTCAGTTTaGGCAGCTTCTTCCAGATCA | + |
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Preference number: 5 (lower is better) Translates to: LTEVTLDVFFNIYSIPWTFSASV*AASSRS Trigger: TGATCTGGAAGAAGCTGCCAAAACTGAGGCTGAGAA...GGTCCAAGGGATGCTGTAGATATTAAAGAAAACATCCAGAGTCACTTCTGTGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027966.14 ENSMUST00000081103.12 ENSMUST00000159969.8 |
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| CDS-3UTR CAA 90 bp | GAAGTGACTCTGGATGTTTTCTTTAATATCTACAGCATCCCTTGGACCAGGAGATCCAGATCAGGAGGATaGTCTGGAACCTGCTTTTTC | + |
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Preference number: 5 (lower is better) Translates to: EVTLDVFFNIYSIPWTRRSRSGG*SGTCFF Trigger: GAAAAAGCAGGTTCCAGACAATCCTCCTGATCTGGA...TCTCCTGGTCCAAGGGATGCTGTAGATATTAAAGAAAACATCCAGAGTCACTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000081103.12 |
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| CDS-3UTR CAA 90 bp | CTCACAGAAGTGACTCTGGATGTTTTCTTTAATATCTACAGCATCCCTTGGACCTATTCTCCACTGTCATaGACTGTGGCCTTAAACGTG | + |
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Preference number: 5 (lower is better) Translates to: LTEVTLDVFFNIYSIPWTYSPLS*TVALNV Trigger: CACGTTTAAGGCCACAGTCAATGACAGTGGAGAATA...GGTCCAAGGGATGCTGTAGATATTAAAGAAAACATCCAGAGTCACTTCTGTGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027966.14 ENSMUST00000081103.12 ENSMUST00000159969.8 |
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| CDS-3UTR CAA 90 bp | TGTCTGTTGGTTTCAGGACTCACAGAAGTGACTCTGGATGTTTTCTTTAATATCTATTCTCCACTGTCATaGACTGTGGCCTTAAACGTG | + |
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Preference number: 5 (lower is better) Translates to: CLLVSGLTEVTLDVFFNIYSPLS*TVALNV Trigger: CACGTTTAAGGCCACAGTCAATGACAGTGGAGAATA...GATATTAAAGAAAACATCCAGAGTCACTTCTGTGAGTCCTGAAACCAACAGACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027966.14 ENSMUST00000081103.12 ENSMUST00000159969.8 |
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| CDS CCA 72 bp | ACCTGGCTCCGGATGGACCTCCCATTGTGGAACCACTaGGTAGAAGAGTTCCCAGGGTTGTGGGTCCCTTCG | + |
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Preference number: 6 (lower is better) Translates to: TWLRMDLPLWNH*VEEFPGLWVPS Trigger: CGAAGGGACCCACAACCCTGGGAACTCTTCTACCCAGTGGTTCCACAATGGGAGGTCCATCCGGAGCCAGGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027966.14 ENSMUST00000081103.12 ENSMUST00000159688.2 ENSMUST00000159969.8 |
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| CDS CCA 72 bp | CTGGCTTGGACCTGGCTCCGGATGGACCTCCCATTGTaGAACCACTGGGTAGAAGAGTTCCCAGGGTTGTGG | + |
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Preference number: 6 (lower is better) Translates to: LAWTWLRMDLPL*NHWVEEFPGLW Trigger: CCACAACCCTGGGAACTCTTCTACCCAGTGGTTCCACAATGGGAGGTCCATCCGGAGCCAGGTCCAAGCCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027966.14 ENSMUST00000081103.12 ENSMUST00000159688.2 ENSMUST00000159969.8 |
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| CDS CCA 72 bp | TTCCAGATCAGGAGGATTGTATGGGCTGCTGCTTGTTaGCTCCAGTCCAGATGGAGGCCCTGGGCTGACAGG | + |
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Preference number: 6 (lower is better) Translates to: FQIRRIVWAAAC*LQSRWRPWADR Trigger: CCTGTCAGCCCAGGGCCTCCATCTGGACTGGAGCCAACAAGCAGCAGCCCATACAATCCTCCTGATCTGGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027966.14 ENSMUST00000159969.8 |
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| CDS GCA 72 bp | GGCACAAAGTCCGTGAGAACACATGGACAGTCCAGTTaGTCTCCATGGGGATCAGTAGGAACGGCAGGATTC | + |
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Preference number: 6 (lower is better) Translates to: GTKSVRTHGQSS*SPWGSVGTAGF Trigger: GAATCCTGCCGTTCCTACTGATCCCCATGGAGAGCAACTGGACTGTCCATGTGTTCTCACGGACTTTGTGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027966.14 ENSMUST00000081103.12 ENSMUST00000159688.2 ENSMUST00000159969.8 |
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| CDS CAA 90 bp | GTATTCTCAGCCTCAGTTTTGGCAGCTTCTTCCAGATCAGGAGGATaGTATGGGCTGCTGCTTGTTGGCTCCAGTCCAGATGGAGGCCCT | + |
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Preference number: 6 (lower is better) Translates to: VFSASVLAASSRSGG*YGLLLVGSSPDGGP Trigger: AGGGCCTCCATCTGGACTGGAGCCAACAAGCAGCAGCCCATACAATCCTCCTGATCTGGAAGAAGCTGCCAAAACTGAGGCTGAGAATAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027966.14 ENSMUST00000159969.8 |
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| CDS TCA 72 bp | TCAGTAGTTTGTTCCTCCAGCTATGGCACCTTAGCGTaGTGGTTTCCCCTTCCAGAAACACCAGCTGAGGGG | + |
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Preference number: 6 (lower is better) Translates to: SVVCSSSYGTLA*WFPLPETPAEG Trigger: CCCCTCAGCTGGTGTTTCTGGAAGGGGAAACCATCACGCTAAGGTGCCATAGCTGGAGGAACAAACTACTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027966.14 ENSMUST00000081103.12 ENSMUST00000159688.2 ENSMUST00000159969.8 |
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| CDS CCA 72 bp | AGTTTTGGCAGCTTCTTCCAGATCAGGAGGATTGTATaGGCTGCTGCTTGTTGGCTCCAGTCCAGATGGAGG | + |
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Preference number: 6 (lower is better) Translates to: SFGSFFQIRRIV*AAACWLQSRWR Trigger: CCTCCATCTGGACTGGAGCCAACAAGCAGCAGCCCATACAATCCTCCTGATCTGGAAGAAGCTGCCAAAACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027966.14 ENSMUST00000159969.8 |
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| CDS CAA 72 bp | TGGCACAAAGTCCGTGAGAACACATGGACAGTCCAGTaGCTCTCCATGGGGATCAGTAGGAACGGCAGGATT | + |
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Preference number: 6 (lower is better) Translates to: WHKVRENTWTVQ*LSMGISRNGRI Trigger: AATCCTGCCGTTCCTACTGATCCCCATGGAGAGCAACTGGACTGTCCATGTGTTCTCACGGACTTTGTGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027966.14 ENSMUST00000081103.12 ENSMUST00000159688.2 ENSMUST00000159969.8 |
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| CDS CAA 72 bp | GCCTCAGTTTTGGCAGCTTCTTCCAGATCAGGAGGATaGTATGGGCTGCTGCTTGTTGGCTCCAGTCCAGAT | + |
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Preference number: 6 (lower is better) Translates to: ASVLAASSRSGG*YGLLLVGSSPD Trigger: ATCTGGACTGGAGCCAACAAGCAGCAGCCCATACAATCCTCCTGATCTGGAAGAAGCTGCCAAAACTGAGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027966.14 ENSMUST00000159969.8 |
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| CDS CCA 72 bp | GCAGCAAGATTTAGCACGGCTGTCCACAGTAGCATATaGCACAAAGTCCGTGAGAACACATGGACAGTCCAG | + |
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Preference number: 6 (lower is better) Translates to: AARFSTAVHSSI*HKVRENTWTVQ Trigger: CTGGACTGTCCATGTGTTCTCACGGACTTTGTGCCATATGCTACTGTGGACAGCCGTGCTAAATCTTGCTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027966.14 ENSMUST00000081103.12 ENSMUST00000159688.2 ENSMUST00000159969.8 |
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| CDS CAA 72 bp | GCCTCAGTTTTGGCAGCTTCTTCCAGATCAGGAGGATaGTCTACTTCCTCTGGAAGGGTTTCTCCCATTTCC | + |
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Preference number: 6 (lower is better) Translates to: ASVLAASSRSGG*STSSGRVSPIS Trigger: GGAAATGGGAGAAACCCTTCCAGAGGAAGTAGACAATCCTCCTGATCTGGAAGAAGCTGCCAAAACTGAGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159688.2 |
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| CDS CCA 72 bp | AGTTTTGGCAGCTTCTTCCAGATCAGGAGGATTGTCTaGAACCTGCTTTTTCTTGAGATAGACCAAGGATAC | + |
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Preference number: 6 (lower is better) Translates to: SFGSFFQIRRIV*NLLFLEIDQGY Trigger: GTATCCTTGGTCTATCTCAAGAAAAAGCAGGTTCCAGACAATCCTCCTGATCTGGAAGAAGCTGCCAAAACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000081103.12 |
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