Pregenerated sensors for FCGR1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000015947Ensembl transcript IDs: ENSMUST00000029748.8, ENSMUST00000200420.2
Found 85 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GCAGGCCGTCCCTGGGGAGGCCTTTCCCTGAACCCATCCACCCTGTaGGGGGATGGCACAGCTGTCCCTTCTGGGCAGGAATCTCACCCC | + |
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Preference number: 1 (lower is better) Translates to: AGRPWGGLSLNPSTL*GDGTAVPSGQESHP Trigger: GGGGTGAGATTCCTGCCCAGAAGGGACAGCTGTGCCATCCCCTCACAGGGTGGATGGGTTCAGGGAAAGGCCTCCCCAGGGACGGCCTGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029748.8 |
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| 3UTR GCA 90 bp | CTAATGTTCACATCCAGGGAGGCTCAGGCTATGCCACACCCACTCTaGAGACTGGGACCTCTAGCACGGCAGACCCTAGAGTTCCAGGGA | + |
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Preference number: 1 (lower is better) Translates to: LMFTSREAQAMPHPL*RLGPLARQTLEFQG Trigger: TCCCTGGAACTCTAGGGTCTGCCGTGCTAGAGGTCCCAGTCTGCAGAGTGGGTGTGGCATAGCCTGAGCCTCCCTGGATGTGAACATTAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029748.8 |
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| 3UTR GCA 90 bp | GCCACTATGTCCTTTGAGGGTCGTGGGCAGCAAATCTGGGGAGGGTaGATGAAGAGAGACGGTAGGAAGGAGAGCACAAATTCCGATGCT | + |
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Preference number: 1 (lower is better) Translates to: ATMSFEGRGQQIWGG*MKRDGRKESTNSDA Trigger: AGCATCGGAATTTGTGCTCTCCTTCCTACCGTCTCTCTTCATGCACCCTCCCCAGATTTGCTGCCCACGACCCTCAAAGGACATAGTGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029748.8 |
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| 3UTR CCA 90 bp | TTAGCTGCCGCCACTATGTCCTTTGAGGGTCGTGGGCAGCAAATCTaGGGAGGGTGCATGAAGAGAGACGGTAGGAAGGAGAGCACAAAT | + |
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Preference number: 1 (lower is better) Translates to: LAAATMSFEGRGQQI*GGCMKRDGRKESTN Trigger: ATTTGTGCTCTCCTTCCTACCGTCTCTCTTCATGCACCCTCCCCAGATTTGCTGCCCACGACCCTCAAAGGACATAGTGGCGGCAGCTAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029748.8 |
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| 3UTR TCA 90 bp | CTATGTCCTTTGAGGGTCGTGGGCAGCAAATCTGGGGAGGGTGCATaGAGAGAGACGGTAGGAAGGAGAGCACAAATTCCGATGCTCTCA | + |
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Preference number: 1 (lower is better) Translates to: LCPLRVVGSKSGEGA*RETVGRRAQIPMLS Trigger: TGAGAGCATCGGAATTTGTGCTCTCCTTCCTACCGTCTCTCTTCATGCACCCTCCCCAGATTTGCTGCCCACGACCCTCAAAGGACATAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029748.8 |
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| 3UTR GCA 90 bp | GGAGAAAGCTCTCACCACCCAATGAGAGCACCTGAGGGTGCTGTCTaGTTGTCAGATAATGATAGAGCTAAAAGCCTTTGTACCATAGCT | + |
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Preference number: 1 (lower is better) Translates to: GESSHHPMRAPEGAV*LSDNDRAKSLCTIA Trigger: AGCTATGGTACAAAGGCTTTTAGCTCTATCATTATCTGACAAGCAGACAGCACCCTCAGGTGCTCTCATTGGGTGGTGAGAGCTTTCTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029748.8 |
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| 3UTR GCA 90 bp | ACCCCTGATCATCTCTCCAGCTCCCACACTGTTTTTGACAGTTTCTaGATGCATTGTACAACAGAGTGTATCTCCTCCTGTGACTGTGGT | + |
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Preference number: 1 (lower is better) Translates to: TPDHLSSSHTVFDSF*MHCTTECISSCDCG Trigger: ACCACAGTCACAGGAGGAGATACACTCTGTTGTACAATGCATGCAGAAACTGTCAAAAACAGTGTGGGAGCTGGAGAGATGATCAGGGGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029748.8 |
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| 3UTR TCA 90 bp | CTTGTTCATATGTCTGTGTCTGCATGCCCTGCACATGTGGGTGCTTaGAAGAGATCAGAAGACGACATCTGGACTTACAAGCAGTTACAA | + |
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Preference number: 1 (lower is better) Translates to: LVHMSVSACPAHVGA*KRSEDDIWTYKQLQ Trigger: TTGTAACTGCTTGTAAGTCCAGATGTCGTCTTCTGATCTCTTTCAAGCACCCACATGTGCAGGGCATGCAGACACAGACATATGAACAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029748.8 |
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| 3UTR GCA 90 bp | TGTTCTTGTTCATATGTCTGTGTCTGCATGCCCTGCACATGTGGGTaGTTGAAAGAGATCAGAAGACGACATCTGGACTTACAAGCAGTT | + |
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Preference number: 1 (lower is better) Translates to: CSCSYVCVCMPCTCG*LKEIRRRHLDLQAV Trigger: AACTGCTTGTAAGTCCAGATGTCGTCTTCTGATCTCTTTCAAGCACCCACATGTGCAGGGCATGCAGACACAGACATATGAACAAGAACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029748.8 |
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| 3UTR-3UTR TCA 90 bp | TCACATCCAGGGAGGCTCAGGCTATGCCACACCCACTCTGCAGACTGGGACCTCGGGGAGGCCTTTCCCTaGACCCATCCACCCTGTGAG | + |
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Preference number: 2 (lower is better) Translates to: SHPGRLRLCHTHSADWDLGEAFP*THPPCE Trigger: CTCACAGGGTGGATGGGTTCAGGGAAAGGCCTCCCC...GAGGTCCCAGTCTGCAGAGTGGGTGTGGCATAGCCTGAGCCTCCCTGGATGTGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029748.8 |
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| 3UTR-3UTR TCA 90 bp | CCTCCGTGGCTACCTCACACCAGTAGAATCCAGCATCTTCTCTTTCCGCCCTTGGTGTCTTCCCGTGCCTaGGCAGTGGTAGATGCCGCT | + |
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Preference number: 2 (lower is better) Translates to: PPWLPHTSRIQHLLFPPLVSSRA*AVVDAA Trigger: AGCGGCATCTACCACTGCTCAGGCACGGGAAGACAC...CAAGGGCGGAAAGAGAAGATGCTGGATTCTACTGGTGTGAGGTAGCCACGGAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200420.2 |
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| 3UTR-3UTR TCA 90 bp | GCCAGCTTTAGCCCAGGCTATGGAGCTGTCTGTATCAGCGTCTGCTCCCCTGACCTCCTTTCAAATGTCTaGTTACCCAGCTTGTCTCAG | + |
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Preference number: 2 (lower is better) Translates to: ASFSPGYGAVCISVCSPDLLSNV*LPSLSQ Trigger: CTGAGACAAGCTGGGTAATCAGACATTTGAAAGGAG...GTCAGGGGAGCAGACGCTGATACAGACAGCTCCATAGCCTGGGCTAAAGCTGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029748.8 |
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| 3UTR-3UTR GCA 90 bp | CCATTATCCCGGTCCCTCTCATGCCTATTGGTCCCTGGTTATAAAGGTCCCAATACACCACATGCAGGCTaGCTGAAAAGGCCCCTAGAG | + |
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Preference number: 2 (lower is better) Translates to: PLSRSLSCLLVPGYKGPNTPHAG*LKRPLE Trigger: CTCTAGGGGCCTTTTCAGGCAGCCTGCATGTGGTGT...ATTGGGACCTTTATAACCAGGGACCAATAGGCATGAGAGGGACCGGGATAATGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029748.8 |
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| 3UTR-3UTR CCA 90 bp | GTAAGTGGAGACATGATCTACTCCTTGTTTCTAGAATTCGGTCTTCCTGCGTGGGTGGGAGTTTGGGGGTaGGGGTATCTGGACCTGAGG | + |
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Preference number: 2 (lower is better) Translates to: VSGDMIYSLFLEFGLPAWVGVWG*GYLDLR Trigger: CCTCAGGTCCAGATACCCCCACCCCCAAACTCCCAC...CCACGCAGGAAGACCGAATTCTAGAAACAAGGAGTAGATCATGTCTCCACTTAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029748.8 |
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| 3UTR-3UTR CCA 90 bp | CCTGAGGGTGCTGTCTGCTTGTCAGATAATGATAGAGCTAAAAGCCTTTGTACCCACAGCTGTCCCTTCTaGGCAGGAATCTCACCCCTG | + |
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Preference number: 2 (lower is better) Translates to: PEGAVCLSDNDRAKSLCTHSCPF*AGISPL Trigger: CAGGGGTGAGATTCCTGCCCAGAAGGGACAGCTGTG...GGTACAAAGGCTTTTAGCTCTATCATTATCTGACAAGCAGACAGCACCCTCAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029748.8 |
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| 3UTR-3UTR TCA 90 bp | ACCCCTGATCATCTCTCCAGCTCCCACACTGTTTTTGACAGTTTCTGCATGCATGTGTATCTCCTCCTGTaGCTGTGGTCCATTATCCCG | + |
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Preference number: 2 (lower is better) Translates to: TPDHLSSSHTVFDSFCMHVYLLL*LWSIIP Trigger: CGGGATAATGGACCACAGTCACAGGAGGAGATACAC...ATGCATGCAGAAACTGTCAAAAACAGTGTGGGAGCTGGAGAGATGATCAGGGGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029748.8 |
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| 3UTR-3UTR TCA 90 bp | CTTAAGGACACTGCTGTCCTCCGTGGCTACCTCACACCAGTAGAATCCAGCATCGGCGACCTCCGAATCTaGAGAAAACTGAAAGGATTT | + |
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Preference number: 2 (lower is better) Translates to: LKDTAVLRGYLTPVESSIGDLRI*RKLKGF Trigger: AAATCCTTTCAGTTTTCTTCAGATTCGGAGGTCGCC...GATGCTGGATTCTACTGGTGTGAGGTAGCCACGGAGGACAGCAGTGTCCTTAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200420.2 |
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| 3UTR-3UTR TCA 90 bp | TGGCTACCTCACACCAGTAGAATCCAGCATCTTCTCTTTCCGCCCTTGCTATATACAGCTCTTTCACCGTaGTGGACACTCCTGCAGATG | + |
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Preference number: 2 (lower is better) Translates to: WLPHTSRIQHLLFPPLLYTALSP*WTLLQM Trigger: CATCTGCAGGAGTGTCCATCACGGTGAAAGAGCTGT...ATATAGCAAGGGCGGAAAGAGAAGATGCTGGATTCTACTGGTGTGAGGTAGCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200420.2 |
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| 3UTR-3UTR CCA 90 bp | GTAAGTGGAGACATGATCTACTCCTTGTTTCTAGAATTCGGTCTTCCTGCGTGGATCTCACCCCTGCTCTaGTTCCGCAAGTCTCAGACT | + |
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Preference number: 2 (lower is better) Translates to: VSGDMIYSLFLEFGLPAWISPLL*FRKSQT Trigger: AGTCTGAGACTTGCGGAACCAGAGCAGGGGTGAGAT...CCACGCAGGAAGACCGAATTCTAGAAACAAGGAGTAGATCATGTCTCCACTTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029748.8 |
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| 3UTR-3UTR CCA 90 bp | TTTTTGACAGTTTCTGCATGCATTGTACAACAGAGTGTATCTCCTCCTGTGACTCACCCTGTGAGGGGATaGCACAGCTGTCCCTTCTGG | + |
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Preference number: 2 (lower is better) Translates to: FLTVSACIVQQSVSPPVTHPVRG*HSCPFW Trigger: CCAGAAGGGACAGCTGTGCCATCCCCTCACAGGGTG...AGTCACAGGAGGAGATACACTCTGTTGTACAATGCATGCAGAAACTGTCAAAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029748.8 |
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| 3UTR-3UTR CCA 90 bp | ATCTACTCCTTGTTTCTAGAATTCGGTCTTCCTGCGTGGTCTAAGGGCATTTGTACAGGTGGTACAGGCTaGAGAAAGCTCTCACCACCC | + |
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Preference number: 2 (lower is better) Translates to: IYSLFLEFGLPAWSKGICTGGTG*RKLSPP Trigger: GGGTGGTGAGAGCTTTCTCCAGCCTGTACCACCTGT...ACAAATGCCCTTAGACCACGCAGGAAGACCGAATTCTAGAAACAAGGAGTAGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029748.8 |
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| 3UTR CAA 90 bp | TCTTGTTCATATGTCTGTGTCTGCATGCCCTGCACATGTGGGTGCTaGAAAGAGATCAGAAGACGACATCTGGACTTACAAGCAGTTACA | + |
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Preference number: 2 (lower is better) Translates to: SCSYVCVCMPCTCGC*KEIRRRHLDLQAVT Trigger: TGTAACTGCTTGTAAGTCCAGATGTCGTCTTCTGATCTCTTTCAAGCACCCACATGTGCAGGGCATGCAGACACAGACATATGAACAAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029748.8 |
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| 3UTR-3UTR GCA 90 bp | GTAAGTGGAGACATGATCTACTCCTTGTTTCTAGAATTCGGTCTTCCTGCGTGGCACTTCCTGTTTCCCTaGTCCATAAGGTCAAACATT | + |
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Preference number: 2 (lower is better) Translates to: VSGDMIYSLFLEFGLPAWHFLFP*SIRSNI Trigger: AATGTTTGACCTTATGGAGCAGGGAAACAGGAAGTG...CCACGCAGGAAGACCGAATTCTAGAAACAAGGAGTAGATCATGTCTCCACTTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029748.8 |
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| 3UTR-3UTR CCA 90 bp | ACACTGTTTTTGACAGTTTCTGCATGCATTGTACAACAGAGTGTATCTCCTCCTACTCCAGCTTACAGGTaGTACAGGCTGGAGAAAGCT | + |
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Preference number: 2 (lower is better) Translates to: TLFLTVSACIVQQSVSPPTPAYR*YRLEKA Trigger: AGCTTTCTCCAGCCTGTACCACCTGTAAGCTGGAGT...AGGAGGAGATACACTCTGTTGTACAATGCATGCAGAAACTGTCAAAAACAGTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029748.8 |
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| 3UTR-3UTR CCA 90 bp | CCTGAGGGTGCTGTCTGCTTGTCAGATAATGATAGAGCTAAAAGCCTTTGTACCGTTGCAAGATCCCTTTaGTATAGGTCTCCTTTCAAA | + |
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Preference number: 2 (lower is better) Translates to: PEGAVCLSDNDRAKSLCTVARSL*YRSPFK Trigger: TTTGAAAGGAGACCTATACCAAAGGGATCTTGCAAC...GGTACAAAGGCTTTTAGCTCTATCATTATCTGACAAGCAGACAGCACCCTCAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029748.8 |
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| 3UTR-3UTR CCA 90 bp | CACACTGTTTTTGACAGTTTCTGCATGCATTGTACAACAGAGTGTATCTCCTCCAGGAGTGACAGTAAGTaGAGACATGATCTACTCCTT | + |
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Preference number: 2 (lower is better) Translates to: HTVFDSFCMHCTTECISSRSDSK*RHDLLL Trigger: AAGGAGTAGATCATGTCTCCACTTACTGTCACTCCT...GGAGGAGATACACTCTGTTGTACAATGCATGCAGAAACTGTCAAAAACAGTGTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029748.8 |
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| 3UTR-3UTR GCA 90 bp | ACACTGTTTTTGACAGTTTCTGCATGCATTGTACAACAGAGTGTATCTCCTCCTTATTTAAGAGTTGCATaGCATGGTCCCACAGTTTCA | + |
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Preference number: 2 (lower is better) Translates to: TLFLTVSACIVQQSVSPPYLRVA*HGPTVS Trigger: TGAAACTGTGGGACCATGGCATGCAACTCTTAAATA...AGGAGGAGATACACTCTGTTGTACAATGCATGCAGAAACTGTCAAAAACAGTGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029748.8 |
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| 3UTR TCA 72 bp | CCTGACACGCAGGCCGTCCCTGGGGAGGCCTTTCCCTaGACCCATCCACCCTGTGAGGGGATGGCACAGCTG | + |
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Preference number: 3 (lower is better) Translates to: PDTQAVPGEAFP*THPPCEGMAQL Trigger: CAGCTGTGCCATCCCCTCACAGGGTGGATGGGTTCAGGGAAAGGCCTCCCCAGGGACGGCCTGCGTGTCAGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029748.8 |
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| 3UTR TCA 72 bp | CCCTGGGGAGGCCTTTCCCTGAACCCATCCACCCTGTaGGGGGATGGCACAGCTGTCCCTTCTGGGCAGGAA | + |
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Preference number: 3 (lower is better) Translates to: PWGGLSLNPSTL*GDGTAVPSGQE Trigger: TTCCTGCCCAGAAGGGACAGCTGTGCCATCCCCTCACAGGGTGGATGGGTTCAGGGAAAGGCCTCCCCAGGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029748.8 |
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| 3UTR GCA 72 bp | ACATCCAGGGAGGCTCAGGCTATGCCACACCCACTCTaGAGACTGGGACCTCTAGCACGGCAGACCCTAGAG | + |
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Preference number: 3 (lower is better) Translates to: TSREAQAMPHPL*RLGPLARQTLE Trigger: CTCTAGGGTCTGCCGTGCTAGAGGTCCCAGTCTGCAGAGTGGGTGTGGCATAGCCTGAGCCTCCCTGGATGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029748.8 |
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| 3UTR CCA 72 bp | ATCCACCCTGTGAGGGGATGGCACAGCTGTCCCTTCTaGGCAGGAATCTCACCCCTGCTCTGGTTCCGCAAG | + |
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Preference number: 3 (lower is better) Translates to: IHPVRGWHSCPF*AGISPLLWFRK Trigger: CTTGCGGAACCAGAGCAGGGGTGAGATTCCTGCCCAGAAGGGACAGCTGTGCCATCCCCTCACAGGGTGGAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029748.8 |
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| 3UTR CCA 72 bp | AGGCCTTTCCCTGAACCCATCCACCCTGTGAGGGGATaGCACAGCTGTCCCTTCTGGGCAGGAATCTCACCC | + |
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Preference number: 3 (lower is better) Translates to: RPFPEPIHPVRG*HSCPFWAGISP Trigger: GGGTGAGATTCCTGCCCAGAAGGGACAGCTGTGCCATCCCCTCACAGGGTGGATGGGTTCAGGGAAAGGCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029748.8 |
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| 3UTR GCA 72 bp | GGCACAGCTGTCCCTTCTGGGCAGGAATCTCACCCCTaGTCTGGTTCCGCAAGTCTCAGACTGGAGTCTTCC | + |
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Preference number: 3 (lower is better) Translates to: GTAVPSGQESHP*SGSASLRLESS Trigger: GGAAGACTCCAGTCTGAGACTTGCGGAACCAGAGCAGGGGTGAGATTCCTGCCCAGAAGGGACAGCTGTGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029748.8 |
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| 3UTR TCA 72 bp | GTCTCTGCAGGAGCAAATTCGTCTCACAGTTCAGGGTaGCCAGACTCCCCTCCGGGAAGGGAGATGACACGG | + |
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Preference number: 3 (lower is better) Translates to: VSAGANSSHSSG*PDSPPGREMTR Trigger: CCGTGTCATCTCCCTTCCCGGAGGGGAGTCTGGTCACCCTGAACTGTGAGACGAATTTGCTCCTGCAGAGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200420.2 |
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| 3UTR CCA 72 bp | GCCACTATGTCCTTTGAGGGTCGTGGGCAGCAAATCTaGGGAGGGTGCATGAAGAGAGACGGTAGGAAGGAG | + |
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Preference number: 3 (lower is better) Translates to: ATMSFEGRGQQI*GGCMKRDGRKE Trigger: CTCCTTCCTACCGTCTCTCTTCATGCACCCTCCCCAGATTTGCTGCCCACGACCCTCAAAGGACATAGTGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029748.8 |
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| 3UTR TCA 72 bp | GACACTTCACTCTTTAGCTGCCGCCACTATGTCCTTTaGGGGTCGTGGGCAGCAAATCTGGGGAGGGTGCAT | + |
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Preference number: 3 (lower is better) Translates to: DTSLFSCRHYVL*GSWAANLGRVH Trigger: ATGCACCCTCCCCAGATTTGCTGCCCACGACCCTCAAAGGACATAGTGGCGGCAGCTAAAGAGTGAAGTGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029748.8 |
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| 3UTR TCA 72 bp | AGGTGGTACAGGCTGGAGAAAGCTCTCACCACCCAATaGGAGCACCTGAGGGTGCTGTCTGCTTGTCAGATA | + |
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Preference number: 3 (lower is better) Translates to: RWYRLEKALTTQ*EHLRVLSACQI Trigger: TATCTGACAAGCAGACAGCACCCTCAGGTGCTCTCATTGGGTGGTGAGAGCTTTCTCCAGCCTGTACCACCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029748.8 |
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| 3UTR GCA 72 bp | TCCTTTGAGGGTCGTGGGCAGCAAATCTGGGGAGGGTaGATGAAGAGAGACGGTAGGAAGGAGAGCACAAAT | + |
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Preference number: 3 (lower is better) Translates to: SFEGRGQQIWGG*MKRDGRKESTN Trigger: ATTTGTGCTCTCCTTCCTACCGTCTCTCTTCATGCACCCTCCCCAGATTTGCTGCCCACGACCCTCAAAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029748.8 |
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| 3UTR GCA 72 bp | TTGTACCATAGCTCTGCTAAGACACCACATGCAGGCTaGCTGAAAAGGCCCCTAGAGTGTGGGAGTTTGGGG | + |
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Preference number: 3 (lower is better) Translates to: LYHSSAKTPHAG*LKRPLECGSLG Trigger: CCCCAAACTCCCACACTCTAGGGGCCTTTTCAGGCAGCCTGCATGTGGTGTCTTAGCAGAGCTATGGTACAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029748.8 |
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| 3UTR GCA 72 bp | TCCTGTGACTGTGGTCCATTATCCCGGTCCCTCTCATaGCTATTGGTCCCTGGTTATAAAGGTCCCAATATA | + |
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Preference number: 3 (lower is better) Translates to: SCDCGPLSRSLS*LLVPGYKGPNI Trigger: TATATTGGGACCTTTATAACCAGGGACCAATAGGCATGAGAGGGACCGGGATAATGGACCACAGTCACAGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029748.8 |
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| 3UTR CCA 72 bp | ACTGTGGTCCATTATCCCGGTCCCTCTCATGCCTATTaGTCCCTGGTTATAAAGGTCCCAATATACCTTGCT | + |
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Preference number: 3 (lower is better) Translates to: TVVHYPGPSHAY*SLVIKVPIYLA Trigger: AGCAAGGTATATTGGGACCTTTATAACCAGGGACCAATAGGCATGAGAGGGACCGGGATAATGGACCACAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029748.8 |
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| 3UTR TCA 72 bp | CAAGATCCCTTTGGTATAGGTCTCCTTTCAAATGTCTaGTTACCCAGCTTGTCTCAGCCGGATCCAGTCTGT | + |
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Preference number: 3 (lower is better) Translates to: QDPFGIGLLSNV*LPSLSQPDPVC Trigger: ACAGACTGGATCCGGCTGAGACAAGCTGGGTAATCAGACATTTGAAAGGAGACCTATACCAAAGGGATCTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029748.8 |
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| 3UTR GCA 72 bp | TCATATGTCTGTGTCTGCATGCCCTGCACATGTGGGTaGTTGAAAGAGATCAGAAGACGACATCTGGACTTA | + |
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Preference number: 3 (lower is better) Translates to: SYVCVCMPCTCG*LKEIRRRHLDL Trigger: TAAGTCCAGATGTCGTCTTCTGATCTCTTTCAAGCACCCACATGTGCAGGGCATGCAGACACAGACATATGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029748.8 |
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| 3UTR CCA 72 bp | CGCTGTGACCTGACTCCATGTGTTGCAAGATCCCTTTaGTATAGGTCTCCTTTCAAATGTCTGATTACCCAG | + |
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Preference number: 3 (lower is better) Translates to: RCDLTPCVARSL*YRSPFKCLITQ Trigger: CTGGGTAATCAGACATTTGAAAGGAGACCTATACCAAAGGGATCTTGCAACACATGGAGTCAGGTCACAGCG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029748.8 |
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| 3UTR CCA 72 bp | ATCTACTCCTTGTTTCTAGAATTCGGTCTTCCTGCGTaGTCTAAGGGCATTTGTGACACCCATGTAAGCCGT | + |
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Preference number: 3 (lower is better) Translates to: IYSLFLEFGLPA*SKGICDTHVSR Trigger: ACGGCTTACATGGGTGTCACAAATGCCCTTAGACCACGCAGGAAGACCGAATTCTAGAAACAAGGAGTAGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029748.8 |
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| 3UTR CCA 72 bp | TTGTTCATATGTCTGTGTCTGCATGCCCTGCACATGTaGGTGCTTGAAAGAGATCAGAAGACGACATCTGGA | + |
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Preference number: 3 (lower is better) Translates to: LFICLCLHALHM*VLERDQKTTSG Trigger: TCCAGATGTCGTCTTCTGATCTCTTTCAAGCACCCACATGTGCAGGGCATGCAGACACAGACATATGAACAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029748.8 |
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| 3UTR GCA 72 bp | CATCTCTCCAGCTCCCACACTGTTTTTGACAGTTTCTaGATGCATTGTACAACAGAGTGTATCTCCTCCTGT | + |
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Preference number: 3 (lower is better) Translates to: HLSSSHTVFDSF*MHCTTECISSC Trigger: ACAGGAGGAGATACACTCTGTTGTACAATGCATGCAGAAACTGTCAAAAACAGTGTGGGAGCTGGAGAGATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029748.8 |
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| 3UTR CCA 72 bp | CAAGACCTTCAGGGGATCCTTAGGAGTGACAGTAAGTaGAGACATGATCTACTCCTTGTTTCTAGAATTCGG | + |
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Preference number: 3 (lower is better) Translates to: QDLQGILRSDSK*RHDLLLVSRIR Trigger: CCGAATTCTAGAAACAAGGAGTAGATCATGTCTCCACTTACTGTCACTCCTAAGGATCCCCTGAAGGTCTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029748.8 |
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| 3UTR GCA 72 bp | AATTGTTCTTGTTCATATGTCTGTGTCTGCATGCCCTaGACATGTGGGTGCTTGAAAGAGATCAGAAGACGA | + |
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Preference number: 3 (lower is better) Translates to: NCSCSYVCVCMP*TCGCLKEIRRR Trigger: TCGTCTTCTGATCTCTTTCAAGCACCCACATGTGCAGGGCATGCAGACACAGACATATGAACAAGAACAATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029748.8 |
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| CDS-3UTR CCA 90 bp | TCACATCCAGGGAGGCTCAGGCTATGCCACACCCACTCTGCAGACTGGGACCTCCACTGCTGTCCTCCGTaGCTACCTCACACCAGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: SHPGRLRLCHTHSADWDLHCCPP*LPHTSR Trigger: TCTACTGGTGTGAGGTAGCCACGGAGGACAGCAGTG...GAGGTCCCAGTCTGCAGAGTGGGTGTGGCATAGCCTGAGCCTCCCTGGATGTGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029748.8 |
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| CDS-3UTR CCA 90 bp | GCCAGCTTTAGCCCAGGCTATGGAGCTGTCTGTATCAGCGTCTGCTCCCCTGACGCGCTTCTTTTGGTGTaGTCTGGCTCGCAGTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: ASFSPGYGAVCISVCSPDALLLV*SGSQWL Trigger: CAGCCACTGCGAGCCAGACCACACCAAAAGAAGCGC...GTCAGGGGAGCAGACGCTGATACAGACAGCTCCATAGCCTGGGCTAAAGCTGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029748.8 |
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| CDS-3UTR TCA 90 bp | GCTGTCCCTTCTGGGCAGGAATCTCACCCCTGCTCTGGTTCCGCAAGTCTCAGACTAGGCGTGGAGATCTaGACGGCTGTTCCGTTGATA | + |
|
Preference number: 4 (lower is better) Translates to: AVPSGQESHPCSGSASLRLGVEI*TAVPLI Trigger: TATCAACGGAACAGCCGTTCAGATCTCCACGCCTAG...TCTGAGACTTGCGGAACCAGAGCAGGGGTGAGATTCCTGCCCAGAAGGGACAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029748.8 |
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| CDS-3UTR GCA 90 bp | TCACATCCAGGGAGGCTCAGGCTATGCCACACCCACTCTGCAGACTGGGACCTCACTTTGGGAAGTTTGTaGCCCAGTACTGTCACTGGG | + |
|
Preference number: 4 (lower is better) Translates to: SHPGRLRLCHTHSADWDLTLGSL*PSTVTG Trigger: CCCAGTGACAGTACTGGGGCACAAACTTCCCAAAGT...GAGGTCCCAGTCTGCAGAGTGGGTGTGGCATAGCCTGAGCCTCCCTGGATGTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029748.8 |
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| CDS-3UTR CCA 90 bp | CGTGGTAAACAGCTCTTTCACCGTGATGGACACTCCTGCAGATGTGTAGCGGTGACTCTGCGGGAGGCCTaGAGTAGCAGCCAATCCATG | + |
|
Preference number: 4 (lower is better) Translates to: RGKQLFHRDGHSCRCVAVTLREA*SSSQSM Trigger: CATGGATTGGCTGCTACTCCAGGCCTCCCGCAGAGT...CACCGCTACACATCTGCAGGAGTGTCCATCACGGTGAAAGAGCTGTTTACCACG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200420.2 |
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| CDS-3UTR CCA 90 bp | CGTGGTAAACAGCTCTTTCACCGTGATGGACACTCCTGCAGATGTGTAGCGGTGGTAGCAGCCAATCCATaGAGGCTGCAAGGTGATCAC | + |
|
Preference number: 4 (lower is better) Translates to: RGKQLFHRDGHSCRCVAVVAANP*RLQGDH Trigger: GTGATCACCTTGCAGCCTCCATGGATTGGCTGCTAC...CACCGCTACACATCTGCAGGAGTGTCCATCACGGTGAAAGAGCTGTTTACCACG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200420.2 |
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| CDS-3UTR TCA 90 bp | TCACATCCAGGGAGGCTCAGGCTATGCCACACCCACTCTGCAGACTGGGACCTCCCTCACACCATAAAGTaGCATTTTCCTTCTGGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: SHPGRLRLCHTHSADWDLPHTIK*HFPSGK Trigger: TTTTCCAGAAGGAAAATGTCACTTTATGGTGTGAGG...GAGGTCCCAGTCTGCAGAGTGGGTGTGGCATAGCCTGAGCCTCCCTGGATGTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029748.8 |
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| CDS-3UTR CCA 90 bp | TCTTTAGCTGCCGCCACTATGTCCTTTGAGGGTCGTGGGCAGCAAATCTGGGGACACTGTCCTGAAAACTaGCCTCTGGGATGCTATAAC | + |
|
Preference number: 4 (lower is better) Translates to: SLAAATMSFEGRGQQIWGHCPEN*PLGCYN Trigger: GTTATAGCATCCCAGAGGCCAGTTTTCAGGACAGTG...TCCCCAGATTTGCTGCCCACGACCCTCAAAGGACATAGTGGCGGCAGCTAAAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029748.8 |
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| CDS-3UTR TCA 90 bp | GTAAGTGGAGACATGATCTACTCCTTGTTTCTAGAATTCGGTCTTCCTGCGTGGCTGTCTCCAGGCAGGTaGGGCCCCTCACACCATAAA | + |
|
Preference number: 4 (lower is better) Translates to: VSGDMIYSLFLEFGLPAWLSPGR*GPSHHK Trigger: TTTATGGTGTGAGGGGCCTCACCTGCCTGGAGACAG...CCACGCAGGAAGACCGAATTCTAGAAACAAGGAGTAGATCATGTCTCCACTTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029748.8 |
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| CDS-3UTR TCA 90 bp | GCTTGTCTCAGCCGGATCCAGTCTGTATATTTGCTTTATTTAAGAGTTGCATGCGTGTCTTCCCGTGCCTaGGCAGTGGTAGATGCCGCT | + |
|
Preference number: 4 (lower is better) Translates to: ACLSRIQSVYLLYLRVACVSSRA*AVVDAA Trigger: AGCGGCATCTACCACTGCTCAGGCACGGGAAGACAC...GCATGCAACTCTTAAATAAAGCAAATATACAGACTGGATCCGGCTGAGACAAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029748.8 |
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| CDS-3UTR CCA 90 bp | GCTGGAGAAAGCTCTCACCACCCAATGAGAGCACCTGAGGGTGCTGTCTGCTTGGTGACATTTTCCTTCTaGAAAATACTGACCCATGGA | + |
|
Preference number: 4 (lower is better) Translates to: AGESSHHPMRAPEGAVCLVTFSF*KILTHG Trigger: TCCATGGGTCAGTATTTTCCAGAAGGAAAATGTCAC...CAAGCAGACAGCACCCTCAGGTGCTCTCATTGGGTGGTGAGAGCTTTCTCCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029748.8 |
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| 3UTR CAA 72 bp | GACTGTGGTCCATTATCCCGGTCCCTCTCATGCCTATaGGTCCCTGGTTATAAAGGTCCCAATATACCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: DCGPLSRSLSCL*VPGYKGPNIPC Trigger: GCAAGGTATATTGGGACCTTTATAACCAGGGACCAATAGGCATGAGAGGGACCGGGATAATGGACCACAGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029748.8 |
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| CDS-3UTR TCA 90 bp | GTAAGTGGAGACATGATCTACTCCTTGTTTCTAGAATTCGGTCTTCCTGCGTGGACAGCTCTTTCACCGTaGTGGACACTCCTGCAGATG | + |
|
Preference number: 4 (lower is better) Translates to: VSGDMIYSLFLEFGLPAWTALSP*WTLLQM Trigger: CATCTGCAGGAGTGTCCATCACGGTGAAAGAGCTGT...CCACGCAGGAAGACCGAATTCTAGAAACAAGGAGTAGATCATGTCTCCACTTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029748.8 |
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| 3UTR CAA 72 bp | CACCACCCAATGAGAGCACCTGAGGGTGCTGTCTGCTaGTCAGATAATGATAGAGCTAAAAGCCTTTGTACC | + |
|
Preference number: 4 (lower is better) Translates to: HHPMRAPEGAVC*SDNDRAKSLCT Trigger: GGTACAAAGGCTTTTAGCTCTATCATTATCTGACAAGCAGACAGCACCCTCAGGTGCTCTCATTGGGTGGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029748.8 |
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| CDS-3UTR GCA 90 bp | CTGCATGCCCTGCACATGTGGGTGCTTGAAAGAGATCAGAAGACGACATCTGGATTTGCTTTCTTTCCCTaGTCAGAAACCAAAGGGACT | + |
|
Preference number: 4 (lower is better) Translates to: LHALHMWVLERDQKTTSGFAFFP*SETKGT Trigger: AGTCCCTTTGGTTTCTGAGCAGGGAAAGAAAGCAAA...TCCAGATGTCGTCTTCTGATCTCTTTCAAGCACCCACATGTGCAGGGCATGCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029748.8 |
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| CDS-3UTR CCA 90 bp | CTGTTTTTGACAGTTTCTGCATGCATTGTACAACAGAGTGTATCTCCTCCTGTGACAGGAGCTGATGACTaGGGACCAAGCACTTGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: LFLTVSACIVQQSVSPPVTGADD*GPSTWS Trigger: GCTCCAAGTGCTTGGTCCCCAGTCATCAGCTCCTGT...CACAGGAGGAGATACACTCTGTTGTACAATGCATGCAGAAACTGTCAAAAACAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029748.8 |
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| CDS-3UTR CCA 90 bp | GTAAGTGGAGACATGATCTACTCCTTGTTTCTAGAATTCGGTCTTCCTGCGTGGAGCAGCCAATCATTGTaGATTTGCAACTGCACAGGG | + |
|
Preference number: 4 (lower is better) Translates to: VSGDMIYSLFLEFGLPAWSSQSL*ICNCTG Trigger: CCCTGTGCAGTTGCAAATCCACAATGATTGGCTGCT...CCACGCAGGAAGACCGAATTCTAGAAACAAGGAGTAGATCATGTCTCCACTTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029748.8 |
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| 3UTR CAA 72 bp | TATGTCTGTGTCTGCATGCCCTGCACATGTGGGTGCTaGAAAGAGATCAGAAGACGACATCTGGACTTACAA | + |
|
Preference number: 4 (lower is better) Translates to: YVCVCMPCTCGC*KEIRRRHLDLQ Trigger: TTGTAAGTCCAGATGTCGTCTTCTGATCTCTTTCAAGCACCCACATGTGCAGGGCATGCAGACACAGACATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029748.8 |
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| CDS-3UTR GCA 90 bp | ACCCCTGATCATCTCTCCAGCTCCCACACTGTTTTTGACAGTTTCTGCATGCATCAATCATTGTGGATTTaGAACTGCACAGGGTCACTT | + |
|
Preference number: 4 (lower is better) Translates to: TPDHLSSSHTVFDSFCMHQSLWI*NCTGSL Trigger: AAGTGACCCTGTGCAGTTGCAAATCCACAATGATTG...ATGCATGCAGAAACTGTCAAAAACAGTGTGGGAGCTGGAGAGATGATCAGGGGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029748.8 |
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| 3UTR CAA 72 bp | TACCCAGCTTGTCTCAGCCGGATCCAGTCTGTATATTaGCTTTATTTAAGAGTTGCATGCCATGGTCCCACA | + |
|
Preference number: 4 (lower is better) Translates to: YPACLSRIQSVY*LYLRVACHGPT Trigger: TGTGGGACCATGGCATGCAACTCTTAAATAAAGCAAATATACAGACTGGATCCGGCTGAGACAAGCTGGGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029748.8 |
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| CDS-3UTR TCA 90 bp | CAGCCGGATCCAGTCTGTATATTTGCTTTATTTAAGAGTTGCATGCCATGGTCCGGCGACCTCCGAATCTaGAGAAAACTGAAAGGATTT | + |
|
Preference number: 4 (lower is better) Translates to: QPDPVCIFALFKSCMPWSGDLRI*RKLKGF Trigger: AAATCCTTTCAGTTTTCTTCAGATTCGGAGGTCGCC...GGACCATGGCATGCAACTCTTAAATAAAGCAAATATACAGACTGGATCCGGCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029748.8 |
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| CDS-3UTR TCA 90 bp | ACACTGTTTTTGACAGTTTCTGCATGCATTGTACAACAGAGTGTATCTCCTCCTTCGCTTCTAACTTGCTaGAAGGAATTTGCTTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: TLFLTVSACIVQQSVSPPSLLTC*KEFAFF Trigger: AAAGAAAGCAAATTCCTTTCAGCAAGTTAGAAGCGA...AGGAGGAGATACACTCTGTTGTACAATGCATGCAGAAACTGTCAAAAACAGTGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029748.8 |
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| CDS-3UTR CAA 90 bp | TGGCACAGCTGTCCCTTCTGGGCAGGAATCTCACCCCTGCTCTGGTTCCGCAAGAGTAGCAGCCAATCATaGTGGATTTGCAACTGCACA | + |
|
Preference number: 5 (lower is better) Translates to: WHSCPFWAGISPLLWFRKSSSQS*WICNCT Trigger: TGTGCAGTTGCAAATCCACAATGATTGGCTGCTACT...CTTGCGGAACCAGAGCAGGGGTGAGATTCCTGCCCAGAAGGGACAGCTGTGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029748.8 |
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| CDS-3UTR CAA 90 bp | TCTTTAGCTGCCGCCACTATGTCCTTTGAGGGTCGTGGGCAGCAAATCTGGGGAAAGGTGATCACAGCCTaGGTGGCATTAACCACTTCC | + |
|
Preference number: 5 (lower is better) Translates to: SLAAATMSFEGRGQQIWGKVITA*VALTTS Trigger: GGAAGTGGTTAATGCCACCAAGGCTGTGATCACCTT...TCCCCAGATTTGCTGCCCACGACCCTCAAAGGACATAGTGGCGGCAGCTAAAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029748.8 |
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| CDS-3UTR CAA 90 bp | CTTAAGGACACTGCTGTCCTCCGTGGCTACCTCACACCAGTAGAATCCAGCATCAAGGTGATCACAGCCTaGGTGGCATTAACCACTTCC | + |
|
Preference number: 5 (lower is better) Translates to: LKDTAVLRGYLTPVESSIKVITA*VALTTS Trigger: GGAAGTGGTTAATGCCACCAAGGCTGTGATCACCTT...GATGCTGGATTCTACTGGTGTGAGGTAGCCACGGAGGACAGCAGTGTCCTTAAG 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200420.2 |
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| CDS-3UTR CAA 90 bp | ATGTCCTTTGAGGGTCGTGGGCAGCAAATCTGGGGAGGGTGCATGAAGAGAGACCTTGCTGAAAGGAATTaGCTTTCTTTCCCTGCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: MSFEGRGQQIWGGCMKRDLAERN*LSFPAQ Trigger: CTGAGCAGGGAAAGAAAGCAAATTCCTTTCAGCAAG...GTCTCTCTTCATGCACCCTCCCCAGATTTGCTGCCCACGACCCTCAAAGGACAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029748.8 |
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| CDS-3UTR CAA 90 bp | GTCTGTGTCTGCATGCCCTGCACATGTGGGTGCTTGAAAGAGATCAGAAGACGACCCAAAGTAGCAGAGTaGTTAGAAGCCACATGTCAT | + |
|
Preference number: 5 (lower is better) Translates to: VCVCMPCTCGCLKEIRRRPKVAE*LEATCH Trigger: ATGACATGTGGCTTCTAACAACTCTGCTACTTTGGG...TCGTCTTCTGATCTCTTTCAAGCACCCACATGTGCAGGGCATGCAGACACAGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029748.8 |
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| CDS-3UTR CAA 90 bp | ATGTCCTTTGAGGGTCGTGGGCAGCAAATCTGGGGAGGGTGCATGAAGAGAGACAAAGGGACTTCTAAGTaGTATTTCTTCTCTCTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: MSFEGRGQQIWGGCMKRDKGTSK*YFFSLC Trigger: GCAGAGAGAGAAGAAATACAACTTAGAAGTCCCTTT...GTCTCTCTTCATGCACCCTCCCCAGATTTGCTGCCCACGACCCTCAAAGGACAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029748.8 |
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| CDS-3UTR CAA 90 bp | CTGCATGCCCTGCACATGTGGGTGCTTGAAAGAGATCAGAAGACGACATCTGGAGCCATCGCTTCTAACTaGCTGAAAGGAATTTGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: LHALHMWVLERDQKTTSGAIASN*LKGICF Trigger: AAAGCAAATTCCTTTCAGCAAGTTAGAAGCGATGGC...TCCAGATGTCGTCTTCTGATCTCTTTCAAGCACCCACATGTGCAGGGCATGCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029748.8 |
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| CDS-3UTR CAA 90 bp | TTTTTGACAGTTTCTGCATGCATTGTACAACAGAGTGTATCTCCTCCTGTGACTCCAATCATTGTGGATTaGCAACTGCACAGGGTCACT | + |
|
Preference number: 5 (lower is better) Translates to: FLTVSACIVQQSVSPPVTPIIVD*QLHRVT Trigger: AGTGACCCTGTGCAGTTGCAAATCCACAATGATTGG...AGTCACAGGAGGAGATACACTCTGTTGTACAATGCATGCAGAAACTGTCAAAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029748.8 |
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| CDS CAA 72 bp | CGTGGAGATCTGAACGGCTGTTCCGTTGATAAACCATaGTGTGGAACTGTCTCCAGGCAGGTGAGGCCCCTC | + |
|
Preference number: 6 (lower is better) Translates to: RGDLNGCSVDKP*CGTVSRQVRPL Trigger: GAGGGGCCTCACCTGCCTGGAGACAGTTCCACACAATGGTTTATCAACGGAACAGCCGTTCAGATCTCCACG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029748.8 |
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| CDS CCA 72 bp | CTGAGCTTCGAGGTCCATCGGGCGCTTCTTTTGGTGTaGTCTGGCTCGCAGTGGCTGTTACTTCTTCATACA | + |
|
Preference number: 6 (lower is better) Translates to: LSFEVHRALLLV*SGSQWLLLLHT Trigger: TGTATGAAGAAGTAACAGCCACTGCGAGCCAGACCACACCAAAAGAAGCGCCCGATGGACCTCGAAGCTCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029748.8 |
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| CDS CAA 90 bp | GCTCGCAGTGGCTGTTACTTCTTCATACACGCCATCGCTTCTAACTaGCTGAAAGGAATTTGCTTTCTTTCCCTGCTCAGAAACCAAAGG | + |
|
Preference number: 6 (lower is better) Translates to: ARSGCYFFIHAIASN*LKGICFLSLLRNQR Trigger: CCTTTGGTTTCTGAGCAGGGAAAGAAAGCAAATTCCTTTCAGCAAGTTAGAAGCGATGGCGTGTATGAAGAAGTAACAGCCACTGCGAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029748.8 |
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| CDS TCA 72 bp | TTGATAAACCATTGTGTGGAACTGTCTCCAGGCAGGTaGGGCCCCTCACACCATAAAGTGACATTTTCCTTC | + |
|
Preference number: 6 (lower is better) Translates to: LINHCVELSPGR*GPSHHKVTFSF Trigger: GAAGGAAAATGTCACTTTATGGTGTGAGGGGCCTCACCTGCCTGGAGACAGTTCCACACAATGGTTTATCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029748.8 |
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| CDS CAA 72 bp | GGCTGTTACTTCTTCATACACGCCATCGCTTCTAACTaGCTGAAAGGAATTTGCTTTCTTTCCCTGCTCAGA | + |
|
Preference number: 6 (lower is better) Translates to: GCYFFIHAIASN*LKGICFLSLLR Trigger: TCTGAGCAGGGAAAGAAAGCAAATTCCTTTCAGCAAGTTAGAAGCGATGGCGTGTATGAAGAAGTAACAGCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029748.8 |
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| CDS TCA 72 bp | GTTACTTCTTCATACACGCCATCGCTTCTAACTTGCTaGAAGGAATTTGCTTTCTTTCCCTGCTCAGAAACC | + |
|
Preference number: 6 (lower is better) Translates to: VTSSYTPSLLTC*KEFAFFPCSET Trigger: GGTTTCTGAGCAGGGAAAGAAAGCAAATTCCTTTCAGCAAGTTAGAAGCGATGGCGTGTATGAAGAAGTAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029748.8 |
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