RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FCGBP (Mus musculus)

Ensembl gene IDs: ENSMUSG00000047730

Ensembl transcript IDs: ENSMUST00000076648.8, ENSMUST00000138392.8

Found 558 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 72 bp GGGACACACAGGGCATCTTCCAATCACTGTAACTTCTaGGAGGGAGCAGGTCTTGATGCCTTCAGTGCCAGT +
Preference number: 3 (lower is better)
Translates to: GTHRASSNHCNF*EGAGLDAFSAS
Trigger: ACTGGCACTGAAGGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTGTGTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR TCA 90 bp GGGAAGGGACACACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGCCCCTTCCTGGCAGGTaGCCTGGCCATCAGGCCCGC +
Preference number: 4 (lower is better)
Translates to: GKGHTGHLPITVTSGREQPLPGR*PGHQAR
Trigger: GCGGGCCTGATGGCCAGGTCACCTGCCAGGAAGGGG...CTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTGTGTCCCTTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR TCA 90 bp GGGAAGGGACACACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGGTCAGGACGCCTCCTaGGGGCTCGCACACCTGTCC +
Preference number: 4 (lower is better)
Translates to: GKGHTGHLPITVTSGREQGQDAS*GLAHLS
Trigger: GGACAGGTGTGCGAGCCCTCAGGAGGCGTCCTGACC...CTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTGTGTCCCTTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR GCA 90 bp CACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCTTCAGTGCCAGTGGTGACAGCCCACAGGAGGGTTaGTCCGGCCCACAGGGCCCA +
Preference number: 4 (lower is better)
Translates to: HCNFWEGAGLDAFSASGDSPQEG*SGPQGP
Trigger: TGGGCCCTGTGGGCCGGAGCAACCCTCCTGTGGGCT...GTCACCACTGGCACTGAAGGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR GCA 90 bp CACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCTTCAGTGCCAGTGGTGACTGGGGCTGTGTGTCGTaGAGGGGGTGGGCAGCTGGC +
Preference number: 4 (lower is better)
Translates to: HCNFWEGAGLDAFSASGDWGCVS*RGWAAG
Trigger: GCCAGCTGCCCACCCCCTGCACGACACACAGCCCCA...GTCACCACTGGCACTGAAGGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CCA 90 bp GGGAAGGGACACACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGGCAGCGCAGCGTTCTaGCCGCATGAGCCCACCAGC +
Preference number: 4 (lower is better)
Translates to: GKGHTGHLPITVTSGREQGSAAF*PHEPTS
Trigger: GCTGGTGGGCTCATGCGGCCAGAACGCTGCGCTGCC...CTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTGTGTCCCTTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CCA 90 bp CACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCTTCAGTGCCAGTGGTGACTGTGCAGGGAGGCACTaGTGCGCAGGGGGAGTCGGG +
Preference number: 4 (lower is better)
Translates to: HCNFWEGAGLDAFSASGDCAGRH*CAGGVG
Trigger: CCCGACTCCCCCTGCGCACCAGTGCCTCCCTGCACA...GTCACCACTGGCACTGAAGGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR TCA 90 bp GGGACACACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGGTCAGGACGCCTCCTaGGGGCTCGCACACCTGTCC +
Preference number: 4 (lower is better)
Translates to: GTHRASSNHCNFWEGAGLGQDAS*GLAHLS
Trigger: GGACAGGTGTGCGAGCCCTCAGGAGGCGTCCTGACC...AAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTGTGTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR TCA 90 bp GGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCTTCACCCCTTCCTGGCAGGTaGCCTGGCCATCAGGCCCGC +
Preference number: 4 (lower is better)
Translates to: GHLPITVTSGREQVLMPSPLPGR*PGHQAR
Trigger: GCGGGCCTGATGGCCAGGTCACCTGCCAGGAAGGGG...TGAAGGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR GCA 90 bp CACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCTTCAGTGCCAGTGGTGACTGGCTCCATCACAGGTaGAGCGGCGGCGGCATCGGT +
Preference number: 4 (lower is better)
Translates to: HCNFWEGAGLDAFSASGDWLHHR*SGGGIG
Trigger: ACCGATGCCGCCGCCGCTGCACCTGTGATGGAGCCA...GTCACCACTGGCACTGAAGGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR GCA 90 bp CACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCTTCAGTGCCAGTGGTGACTCCAGGGATGCACAGTaGCCCCGGCAGCCTGGCATG +
Preference number: 4 (lower is better)
Translates to: HCNFWEGAGLDAFSASGDSRDAQ*PRQPGM
Trigger: CATGCCAGGCTGCCGGGGGCACTGTGCATCCCTGGA...GTCACCACTGGCACTGAAGGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR GCA 90 bp GGGAAGGGACACACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGTCCAGGGATGCACAGTaGCCCCGGCAGCCTGGCATG +
Preference number: 4 (lower is better)
Translates to: GKGHTGHLPITVTSGREQSRDAQ*PRQPGM
Trigger: CATGCCAGGCTGCCGGGGGCACTGTGCATCCCTGGA...CTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTGTGTCCCTTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR GCA 90 bp GGGACACACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTTCGCTCCTCCAGGGATaGACAGTGCCCCCGGCAGCC +
Preference number: 4 (lower is better)
Translates to: GTHRASSNHCNFWEGAGLSLLQG*TVPPAA
Trigger: GGCTGCCGGGGGCACTGTGCATCCCTGGAGGAGCGA...AAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTGTGTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR GCA 90 bp CACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCTGGGGCTGTGTGTCGTaGAGGGGGTGGGCAGCTGGC +
Preference number: 4 (lower is better)
Translates to: HRASSNHCNFWEGAGLDAWGCVS*RGWAAG
Trigger: GCCAGCTGCCCACCCCCTGCACGACACACAGCCCCA...GGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR GCA 90 bp CACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCTTCAGTGCCAGTGGTGACCCAGGGCTTCACTGCTaGCCCAGCTGCCTGACAGGC +
Preference number: 4 (lower is better)
Translates to: HCNFWEGAGLDAFSASGDPGLHC*PSCLTG
Trigger: GCCTGTCAGGCAGCTGGGGCAGCAGTGAAGCCCTGG...GTCACCACTGGCACTGAAGGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CCA 90 bp CACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCGGCAGCGCAGCGTTCTaGCCGCATGAGCCCACCAGC +
Preference number: 4 (lower is better)
Translates to: HRASSNHCNFWEGAGLDAGSAAF*PHEPTS
Trigger: GCTGGTGGGCTCATGCGGCCAGAACGCTGCGCTGCC...GGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CCA 90 bp CACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCTTCAGTGCCAGTGGTGACCACACTGGGCAGCCTTaGGGCCCGCAGCCTTCACCA +
Preference number: 4 (lower is better)
Translates to: HCNFWEGAGLDAFSASGDHTGQP*GPQPSP
Trigger: TGGTGAAGGCTGCGGGCCCCAAGGCTGCCCAGTGTG...GTCACCACTGGCACTGAAGGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CCA 90 bp GGGAAGGGACACACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGCAGCACAGGAGCCCTaGCAGGAGCGGGTGCAGATG +
Preference number: 4 (lower is better)
Translates to: GKGHTGHLPITVTSGREQAAQEP*QERVQM
Trigger: CATCTGCACCCGCTCCTGCCAGGGCTCCTGTGCTGC...CTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTGTGTCCCTTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR TCA 90 bp GGGACACACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGGGTGGTGCAGCCAGTaGGGCCAGAGAGAGCAGCAC +
Preference number: 4 (lower is better)
Translates to: GTHRASSNHCNFWEGAGLGWCSQ*GQREQH
Trigger: GTGCTGCTCTCTCTGGCCTCACTGGCTGCACCACCC...AAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTGTGTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR GCA 90 bp ACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCTAGCCCACAGGAGGGTTaGTCCGGCCCACAGGGCCCA +
Preference number: 4 (lower is better)
Translates to: TGHLPITVTSGREQVLMPSPQEG*SGPQGP
Trigger: TGGGCCCTGTGGGCCGGAGCAACCCTCCTGTGGGCT...AGGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR GCA 90 bp GGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCTTCATCGCTCCTCCAGGGATaGACAGTGCCCCCGGCAGCC +
Preference number: 4 (lower is better)
Translates to: GHLPITVTSGREQVLMPSSLLQG*TVPPAA
Trigger: GGCTGCCGGGGGCACTGTGCATCCCTGGAGGAGCGA...TGAAGGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR GCA 90 bp CACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCTTCAGTGCCAGTGGTGACCCTCCAGGGCTTCACTaGTGCCCCAGCTGCCTGACA +
Preference number: 4 (lower is better)
Translates to: HCNFWEGAGLDAFSASGDPPGLH*CPSCLT
Trigger: TGTCAGGCAGCTGGGGCAGCAGTGAAGCCCTGGAGG...GTCACCACTGGCACTGAAGGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CCA 90 bp GGGAAGGGACACACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGCAGGATGCCTCTGCTaGGGTGAGCAGAGCCCACAG +
Preference number: 4 (lower is better)
Translates to: GKGHTGHLPITVTSGREQAGCLC*GEQSPQ
Trigger: CTGTGGGCTCTGCTCACCCCAGCAGAGGCATCCTGC...CTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTGTGTCCCTTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CCA 90 bp ACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCTTGTGCAGGGAGGCACTaGTGCGCAGGGGGAGTCGGG +
Preference number: 4 (lower is better)
Translates to: TGHLPITVTSGREQVLMPCAGRH*CAGGVG
Trigger: CCCGACTCCCCCTGCGCACCAGTGCCTCCCTGCACA...AGGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CCA 90 bp GGGAAGGGACACACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGTCCTGGCAGGTGACCTaGCCATCAGGCCCGCACTCA +
Preference number: 4 (lower is better)
Translates to: GKGHTGHLPITVTSGREQSWQVT*PSGPHS
Trigger: TGAGTGCGGGCCTGATGGCCAGGTCACCTGCCAGGA...CTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTGTGTCCCTTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CCA 90 bp GGGAAGGGACACACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGCTGTCACACTCACGTaGCCTGTGGCCACAGGCAGG +
Preference number: 4 (lower is better)
Translates to: GKGHTGHLPITVTSGREQAVTLT*PVATGR
Trigger: CCTGCCTGTGGCCACAGGCCACGTGAGTGTGACAGC...CTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTGTGTCCCTTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CCA 90 bp CACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCGCAGCACAGGAGCCCTaGCAGGAGCGGGTGCAGATG +
Preference number: 4 (lower is better)
Translates to: HRASSNHCNFWEGAGLDAAAQEP*QERVQM
Trigger: CATCTGCACCCGCTCCTGCCAGGGCTCCTGTGCTGC...GGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR TCA 90 bp GGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCTTCAGCCCTCTCGGCATTCTaGGCCACAGCCTCCCTGCAC +
Preference number: 4 (lower is better)
Translates to: GHLPITVTSGREQVLMPSALSAF*ATASLH
Trigger: GTGCAGGGAGGCTGTGGCTCAGAATGCCGAGAGGGC...TGAAGGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR TCA 90 bp CACACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGGCCCTCTCGGCATTCTaGGCCACAGCCTCCCTGCAC +
Preference number: 4 (lower is better)
Translates to: HTGHLPITVTSGREQVLMALSAF*ATASLH
Trigger: GTGCAGGGAGGCTGTGGCTCAGAATGCCGAGAGGGC...CATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR TCA 90 bp CACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCTTCAGTGCCAGTGGTGACGGCGGCCGTCAAAGGTaGCGTAATGAGGGTCTCCTG +
Preference number: 4 (lower is better)
Translates to: HCNFWEGAGLDAFSASGDGGRQR*RNEGLL
Trigger: CAGGAGACCCTCATTACGTCACCTTTGACGGCCGCC...GTCACCACTGGCACTGAAGGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR TCA 90 bp CACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCTTCAGTGCCAGTGGTGACGGGCATGGCAGCTGGTaGAAGGACTCCCTGTACCAG +
Preference number: 4 (lower is better)
Translates to: HCNFWEGAGLDAFSASGDGHGSW*KDSLYQ
Trigger: CTGGTACAGGGAGTCCTTTCACCAGCTGCCATGCCC...GTCACCACTGGCACTGAAGGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR TCA 90 bp GGGAAGGGACACACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGGGCATGGCAGCTGGTaGAAGGACTCCCTGTACCAG +
Preference number: 4 (lower is better)
Translates to: GKGHTGHLPITVTSGREQGHGSW*KDSLYQ
Trigger: CTGGTACAGGGAGTCCTTTCACCAGCTGCCATGCCC...CTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTGTGTCCCTTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR TCA 90 bp GGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCTTCAGGGTGGTGCAGCCAGTaGGGCCAGAGAGAGCAGCAC +
Preference number: 4 (lower is better)
Translates to: GHLPITVTSGREQVLMPSGWCSQ*GQREQH
Trigger: GTGCTGCTCTCTCTGGCCTCACTGGCTGCACCACCC...TGAAGGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR TCA 90 bp GGGAAGGGACACACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGTTCCAAGCCACACCGTaGCCCCAGCCTTCTGGTGGA +
Preference number: 4 (lower is better)
Translates to: GKGHTGHLPITVTSGREQFQATP*PQPSGG
Trigger: TCCACCAGAAGGCTGGGGTCACGGTGTGGCTTGGAA...CTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTGTGTCCCTTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR GCA 90 bp GGGAAGGGACACACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGTTGGCAGGATGCCTCTaGTGGGGTGAGCAGAGCCCA +
Preference number: 4 (lower is better)
Translates to: GKGHTGHLPITVTSGREQLAGCL*WGEQSP
Trigger: TGGGCTCTGCTCACCCCAGCAGAGGCATCCTGCCAA...CTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTGTGTCCCTTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR GCA 90 bp GGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCTTCATGGCTCCATCACAGGTaGAGCGGCGGCGGCATCGGT +
Preference number: 4 (lower is better)
Translates to: GHLPITVTSGREQVLMPSWLHHR*SGGGIG
Trigger: ACCGATGCCGCCGCCGCTGCACCTGTGATGGAGCCA...TGAAGGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR GCA 90 bp GGGACACACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTCCCGGCAGCCTGGCATaGAGCAGCATAGGCTGCCAA +
Preference number: 4 (lower is better)
Translates to: GTHRASSNHCNFWEGAGLPGSLA*SSIGCQ
Trigger: TTGGCAGCCTATGCTGCTGCATGCCAGGCTGCCGGG...AAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTGTGTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR GCA 90 bp GGGACACACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTACAGGCCACAGAGGGTaGCAGCATAGGCAGCGGGCA +
Preference number: 4 (lower is better)
Translates to: GTHRASSNHCNFWEGAGLTGHRG*QHRQRA
Trigger: TGCCCGCTGCCTATGCTGGCACCCTCTGTGGCCTGT...AAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTGTGTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR GCA 90 bp GGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCTTCACCAGGGCTTCACTGCTaGCCCAGCTGCCTGACAGGC +
Preference number: 4 (lower is better)
Translates to: GHLPITVTSGREQVLMPSPGLHC*PSCLTG
Trigger: GCCTGTCAGGCAGCTGGGGCAGCAGTGAAGCCCTGG...TGAAGGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR GCA 90 bp CACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCTTCAGTGCCAGTGGTGACCCTGGCAGGAGCGGGTaGAGATGGAGTAGTGGCTGT +
Preference number: 4 (lower is better)
Translates to: HCNFWEGAGLDAFSASGDPGRSG*RWSSGC
Trigger: ACAGCCACTACTCCATCTGCACCCGCTCCTGCCAGG...GTCACCACTGGCACTGAAGGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CCA 90 bp CACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCTTCAGTGCCAGTGGTGACCACAGCCCGCACACTTaGTCTTGGAAGCGCTTGGGC +
Preference number: 4 (lower is better)
Translates to: HCNFWEGAGLDAFSASGDHSPHT*SWKRLG
Trigger: GCCCAAGCGCTTCCAAGACCAAGTGTGCGGGCTGTG...GTCACCACTGGCACTGAAGGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CCA 90 bp GGGAAGGGACACACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTGTTGGGTCTGCCCTaGGGTGCAGGAGGGACAAGA +
Preference number: 4 (lower is better)
Translates to: GKGHTGHLPITVTSGREQVLGLP*GAGGTR
Trigger: TCTTGTCCCTCCTGCACCCCAGGGCAGACCCAACAC...CTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTGTGTCCCTTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CCA 90 bp CACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCACTGGCCACGAAGCCTaGAAGGCACACGCAGCCCTC +
Preference number: 4 (lower is better)
Translates to: HRASSNHCNFWEGAGLDATGHEA*KAHAAL
Trigger: GAGGGCTGCGTGTGCCTTCCAGGCTTCGTGGCCAGT...GGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CCA 90 bp CACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCGGGTCTAGCAGCTTGTaGCAGGCAGCCAGTGGCCCT +
Preference number: 4 (lower is better)
Translates to: HRASSNHCNFWEGAGLDAGSSSL*QAASGP
Trigger: AGGGCCACTGGCTGCCTGCCACAAGCTGCTAGACCC...GGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CCA 90 bp CACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCCTGTGGGCAGGGCACTaGAGGGGACAGAAGTCTGGC +
Preference number: 4 (lower is better)
Translates to: HRASSNHCNFWEGAGLDALWAGH*RGQKSG
Trigger: GCCAGACTTCTGTCCCCTCCAGTGCCCTGCCCACAG...GGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CCA 90 bp GGGAAGGGACACACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGCAGTCTGCCCCTTCCTaGCAGGTGACCTGGCCATCA +
Preference number: 4 (lower is better)
Translates to: GKGHTGHLPITVTSGREQQSAPS*QVTWPS
Trigger: TGATGGCCAGGTCACCTGCCAGGAAGGGGCAGACTG...CTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTGTGTCCCTTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CCA 90 bp CACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCGCTGTCACACTCACGTaGCCTGTGGCCACAGGCAGG +
Preference number: 4 (lower is better)
Translates to: HRASSNHCNFWEGAGLDAAVTLT*PVATGR
Trigger: CCTGCCTGTGGCCACAGGCCACGTGAGTGTGACAGC...GGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CCA 90 bp GGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCTTCACACACTGGGCAGCCTTaGGGCCCGCAGCCTTCACCA +
Preference number: 4 (lower is better)
Translates to: GHLPITVTSGREQVLMPSHTGQP*GPQPSP
Trigger: TGGTGAAGGCTGCGGGCCCCAAGGCTGCCCAGTGTG...TGAAGGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CCA 90 bp ACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCTCTCTGCCAAGCACACTaGGCAGCCTTGGGGCCCGCA +
Preference number: 4 (lower is better)
Translates to: TGHLPITVTSGREQVLMPLCQAH*AALGPA
Trigger: TGCGGGCCCCAAGGCTGCCCAGTGTGCTTGGCAGAG...AGGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CCA 90 bp CACACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCTCTGCCAAGCACACTaGGCAGCCTTGGGGCCCGCA +
Preference number: 4 (lower is better)
Translates to: HTGHLPITVTSGREQVLMLCQAH*AALGPA
Trigger: TGCGGGCCCCAAGGCTGCCCAGTGTGCTTGGCAGAG...CATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CCA 90 bp GGGAAGGGACACACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGAGGAGCGGGTGCAGATaGAGTAGTGGCTGTGGGCAG +
Preference number: 4 (lower is better)
Translates to: GKGHTGHLPITVTSGREQRSGCR*SSGCGQ
Trigger: CTGCCCACAGCCACTACTCCATCTGCACCCGCTCCT...CTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTGTGTCCCTTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CCA 90 bp CACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCTTCAGTGCCAGTGGTGACACCCCAGCCTTCTGGTaGACAAGCATGGAGCCGTCG +
Preference number: 4 (lower is better)
Translates to: HCNFWEGAGLDAFSASGDTPAFW*TSMEPS
Trigger: CGACGGCTCCATGCTTGTCCACCAGAAGGCTGGGGT...GTCACCACTGGCACTGAAGGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR TCA 90 bp ACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCTGGTCGGCACAGCTTCTaGGTTGCAGGAAGGCGGGCA +
Preference number: 4 (lower is better)
Translates to: TGHLPITVTSGREQVLMPGRHSF*VAGRRA
Trigger: TGCCCGCCTTCCTGCAACTCAGAAGCTGTGCCGACC...AGGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR TCA 90 bp GGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCTTCAGGTCGGCACAGCTTCTaGGTTGCAGGAAGGCGGGCA +
Preference number: 4 (lower is better)
Translates to: GHLPITVTSGREQVLMPSGRHSF*VAGRRA
Trigger: TGCCCGCCTTCCTGCAACTCAGAAGCTGTGCCGACC...TGAAGGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR GCA 90 bp CACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCTTCAGTGCCAGTGGTGACGCAGCGCTGCCCAGATaGACACTGAATGCCTTGGCA +
Preference number: 4 (lower is better)
Translates to: HCNFWEGAGLDAFSASGDAALPR*TLNALA
Trigger: TGCCAAGGCATTCAGTGTGCATCTGGGCAGCGCTGC...GTCACCACTGGCACTGAAGGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR GCA 90 bp GGGAAGGGACACACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGCAGCGCTGCCCAGATaGACACTGAATGCCTTGGCA +
Preference number: 4 (lower is better)
Translates to: GKGHTGHLPITVTSGREQAALPR*TLNALA
Trigger: TGCCAAGGCATTCAGTGTGCATCTGGGCAGCGCTGC...CTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTGTGTCCCTTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR GCA 90 bp GGGACACACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGGGTCTGCCCTGGGGTaGAGGAGGGACAAGAGTTGT +
Preference number: 4 (lower is better)
Translates to: GTHRASSNHCNFWEGAGLGSALG*RRDKSC
Trigger: ACAACTCTTGTCCCTCCTGCACCCCAGGGCAGACCC...AAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTGTGTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR GCA 90 bp GGGAAGGGACACACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGGCGACCCTGGTAGATaGACCCACAGGATGAGACAG +
Preference number: 4 (lower is better)
Translates to: GKGHTGHLPITVTSGREQGDPGR*THRMRQ
Trigger: CTGTCTCATCCTGTGGGTGCATCTACCAGGGTCGCC...CTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTGTGTCCCTTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR GCA 90 bp CACACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCCGGCAGCCTGGCATaGAGCAGCATAGGCTGCCAA +
Preference number: 4 (lower is better)
Translates to: HTGHLPITVTSGREQVLMPGSLA*SSIGCQ
Trigger: TTGGCAGCCTATGCTGCTGCATGCCAGGCTGCCGGG...CATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR GCA 90 bp CACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCTTCAGTGCCAGTGGTGACCACCCTTCTGGGCACTaGTGGGGTGTATTCAGAGCC +
Preference number: 4 (lower is better)
Translates to: HCNFWEGAGLDAFSASGDHPSGH*WGVFRA
Trigger: GGCTCTGAATACACCCCAGCAGTGCCCAGAAGGGTG...GTCACCACTGGCACTGAAGGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR GCA 90 bp CACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCTTCAGTGCCAGTGGTGACCACAGCTGGCAGGCTTaGAGACCAAGGAGTCACCTC +
Preference number: 4 (lower is better)
Translates to: HCNFWEGAGLDAFSASGDHSWQA*RPRSHL
Trigger: GAGGTGACTCCTTGGTCTGCAAGCCTGCCAGCTGTG...GTCACCACTGGCACTGAAGGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR GCA 90 bp GGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCTTCAACAGGCCACAGAGGGTaGCAGCATAGGCAGCGGGCA +
Preference number: 4 (lower is better)
Translates to: GHLPITVTSGREQVLMPSTGHRG*QHRQRA
Trigger: TGCCCGCTGCCTATGCTGGCACCCTCTGTGGCCTGT...TGAAGGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR GCA 90 bp GGGAAGGGACACACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGAGGTTTCCCGCCCACTaGAGTCAGGTCATCGTTGGG +
Preference number: 4 (lower is better)
Translates to: GKGHTGHLPITVTSGREQRFPAH*SQVIVG
Trigger: CCCAACGATGACCTGACTGCAGTGGGCGGGAAACCT...CTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTGTGTCCCTTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR GCA 90 bp CACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCTTCAGTGCCAGTGGTGACAGGTTTCCCGCCCACTaGAGTCAGGTCATCGTTGGG +
Preference number: 4 (lower is better)
Translates to: HCNFWEGAGLDAFSASGDRFPAH*SQVIVG
Trigger: CCCAACGATGACCTGACTGCAGTGGGCGGGAAACCT...GTCACCACTGGCACTGAAGGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR GCA 90 bp GGGAAGGGACACACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGCAAGCCTCGAAGTACTaGGTGGGTGGCACAAGGCTG +
Preference number: 4 (lower is better)
Translates to: GKGHTGHLPITVTSGREQQASKY*VGGTRL
Trigger: CAGCCTTGTGCCACCCACGCAGTACTTCGAGGCTTG...CTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTGTGTCCCTTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR GCA 90 bp CACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCTTCAGTGCCAGTGGTGACCAAGCCTCGAAGTACTaGGTGGGTGGCACAAGGCTG +
Preference number: 4 (lower is better)
Translates to: HCNFWEGAGLDAFSASGDQASKY*VGGTRL
Trigger: CAGCCTTGTGCCACCCACGCAGTACTTCGAGGCTTG...GTCACCACTGGCACTGAAGGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR GCA 90 bp GGGAAGGGACACACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGATAGGGCTCACAGTCTaGCCCTTCCTGGCAGGTGAC +
Preference number: 4 (lower is better)
Translates to: GKGHTGHLPITVTSGREQIGLTV*PFLAGD
Trigger: GTCACCTGCCAGGAAGGGGCAGACTGTGAGCCCTAT...CTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTGTGTCCCTTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR GCA 90 bp GGGAAGGGACACACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGTGCTTGTGTCTCCTCTaGCAAGCACACTGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: GKGHTGHLPITVTSGREQCLCLL*QAHWAA
Trigger: GGCTGCCCAGTGTGCTTGGCAGAGGAGACACAAGCA...CTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTGTGTCCCTTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR GCA 90 bp GGGAAGGGACACACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGCACTGCTGCCCCAGCTaGCTGACAGGCTGCAGTATA +
Preference number: 4 (lower is better)
Translates to: GKGHTGHLPITVTSGREQHCCPS*LTGCSI
Trigger: TATACTGCAGCCTGTCAGGCAGCTGGGGCAGCAGTG...CTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTGTGTCCCTTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR GCA 90 bp CACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCCCTGGCAGGAGCGGGTaGAGATGGAGTAGTGGCTGT +
Preference number: 4 (lower is better)
Translates to: HRASSNHCNFWEGAGLDAPGRSG*RWSSGC
Trigger: ACAGCCACTACTCCATCTGCACCCGCTCCTGCCAGG...GGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CCA 90 bp CACACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGGCAGGATGCCTCTGCTaGGGTGAGCAGAGCCCACAG +
Preference number: 4 (lower is better)
Translates to: HTGHLPITVTSGREQVLMAGCLC*GEQSPQ
Trigger: CTGTGGGCTCTGCTCACCCCAGCAGAGGCATCCTGC...CATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CCA 90 bp GGGAAGGGACACACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGGGTCTCCTGATGCCTaGCAGGTAGTAGTGCCCACA +
Preference number: 4 (lower is better)
Translates to: GKGHTGHLPITVTSGREQGSPDA*QVVVPT
Trigger: TGTGGGCACTACTACCTGCCAGGCATCAGGAGACCC...CTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTGTGTCCCTTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CCA 90 bp CACACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGGGGTCTAGCAGCTTGTaGCAGGCAGCCAGTGGCCCT +
Preference number: 4 (lower is better)
Translates to: HTGHLPITVTSGREQVLMGSSSL*QAASGP
Trigger: AGGGCCACTGGCTGCCTGCCACAAGCTGCTAGACCC...CATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CCA 90 bp ACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCTCTGTGGGCAGGGCACTaGAGGGGACAGAAGTCTGGC +
Preference number: 4 (lower is better)
Translates to: TGHLPITVTSGREQVLMPLWAGH*RGQKSG
Trigger: GCCAGACTTCTGTCCCCTCCAGTGCCCTGCCCACAG...AGGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CCA 90 bp GGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCTTCATCCTGGCAGGTGACCTaGCCATCAGGCCCGCACTCA +
Preference number: 4 (lower is better)
Translates to: GHLPITVTSGREQVLMPSSWQVT*PSGPHS
Trigger: TGAGTGCGGGCCTGATGGCCAGGTCACCTGCCAGGA...TGAAGGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CCA 90 bp CACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCAGTGGCCACAGCCAGTaGGATGACAGGCCTGAACGC +
Preference number: 4 (lower is better)
Translates to: HRASSNHCNFWEGAGLDASGHSQ*DDRPER
Trigger: GCGTTCAGGCCTGTCATCCCACTGGCTGTGGCCACT...GGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CCA 90 bp GGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCTTCACACTCACGTGGCCTGTaGCCACAGGCAGGGTCACGA +
Preference number: 4 (lower is better)
Translates to: GHLPITVTSGREQVLMPSHSRGL*PQAGSR
Trigger: TCGTGACCCTGCCTGTGGCCACAGGCCACGTGAGTG...TGAAGGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CCA 90 bp CACACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCACTCACGTGGCCTGTaGCCACAGGCAGGGTCACGA +
Preference number: 4 (lower is better)
Translates to: HTGHLPITVTSGREQVLMHSRGL*PQAGSR
Trigger: TCGTGACCCTGCCTGTGGCCACAGGCCACGTGAGTG...CATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CCA 90 bp CACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCAGGAGCGGGTGCAGATaGAGTAGTGGCTGTGGGCAG +
Preference number: 4 (lower is better)
Translates to: HRASSNHCNFWEGAGLDARSGCR*SSGCGQ
Trigger: CTGCCCACAGCCACTACTCCATCTGCACCCGCTCCT...GGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CCA 90 bp CACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCTTCAGTGCCAGTGGTGACCCATGCACCCTTGCTTaGGATCACAGTCACCAGGCC +
Preference number: 4 (lower is better)
Translates to: HCNFWEGAGLDAFSASGDPCTLA*DHSHQA
Trigger: GGCCTGGTGACTGTGATCCCAAGCAAGGGTGCATGG...GTCACCACTGGCACTGAAGGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR TCA 90 bp CACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCTTCAGTGCCAGTGGTGACCATCCCAGTCATAGGTaGCCACCAGCCCAAAGTCCA +
Preference number: 4 (lower is better)
Translates to: HCNFWEGAGLDAFSASGDHPSHR*PPAQSP
Trigger: TGGACTTTGGGCTGGTGGTCACCTATGACTGGGATG...GTCACCACTGGCACTGAAGGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR TCA 90 bp CACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCTTCAGTGCCAGTGGTGACGATGCACCCACAGGATaGGACAGGCACACAATCACC +
Preference number: 4 (lower is better)
Translates to: HCNFWEGAGLDAFSASGDDAPTG*DRHTIT
Trigger: GGTGATTGTGTGCCTGTCTCATCCTGTGGGTGCATC...GTCACCACTGGCACTGAAGGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR TCA 90 bp GGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCTTCAAGCGTTCTGGCCGCATaGGCCCACCAGCAGGTATGT +
Preference number: 4 (lower is better)
Translates to: GHLPITVTSGREQVLMPSSVLAA*AHQQVC
Trigger: ACATACCTGCTGGTGGGCTCATGCGGCCAGAACGCT...TGAAGGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR TCA 90 bp CACACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGAGCGTTCTGGCCGCATaGGCCCACCAGCAGGTATGT +
Preference number: 4 (lower is better)
Translates to: HTGHLPITVTSGREQVLMSVLAA*AHQQVC
Trigger: ACATACCTGCTGGTGGGCTCATGCGGCCAGAACGCT...CATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR TCA 90 bp CACACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGGGCGGCCGTCAAAGGTaGCGTAATGAGGGTCTCCTG +
Preference number: 4 (lower is better)
Translates to: HTGHLPITVTSGREQVLMGGRQR*RNEGLL
Trigger: CAGGAGACCCTCATTACGTCACCTTTGACGGCCGCC...CATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR TCA 90 bp GGGACACACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTTCTCCTGCAGGACAGTaGACTGGTGTAGACCAGGCC +
Preference number: 4 (lower is better)
Translates to: GTHRASSNHCNFWEGAGLSPAGQ*TGVDQA
Trigger: GGCCTGGTCTACACCAGTTCACTGTCCTGCAGGAGA...AAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTGTGTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR TCA 90 bp CACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCTTCAGTGCCAGTGGTGACCCACACCGTTCACCTTaGCCTTCCACTGACTCTGCT +
Preference number: 4 (lower is better)
Translates to: HCNFWEGAGLDAFSASGDPHRSP*PSTDSA
Trigger: AGCAGAGTCAGTGGAAGGTCAAGGTGAACGGTGTGG...GTCACCACTGGCACTGAAGGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR TCA 90 bp GGGAAGGGACACACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGCCCGTCCATCAAGAGTaGCATAATGGAGGCCTCCGT +
Preference number: 4 (lower is better)
Translates to: GKGHTGHLPITVTSGREQPVHQE*HNGGLR
Trigger: ACGGAGGCCTCCATTATGTCACTCTTGATGGACGGG...CTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTGTGTCCCTTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR TCA 90 bp CACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCGCGCTCGCTGCAGTCTaGGGACATCAGGGAAGAGTT +
Preference number: 4 (lower is better)
Translates to: HRASSNHCNFWEGAGLDAALAAV*GHQGRV
Trigger: AACTCTTCCCTGATGTCCTCAGACTGCAGCGAGCGC...GGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR GCA 90 bp ACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCTTTGGCAGGATGCCTCTaGTGGGGTGAGCAGAGCCCA +
Preference number: 4 (lower is better)
Translates to: TGHLPITVTSGREQVLMPLAGCL*WGEQSP
Trigger: TGGGCTCTGCTCACCCCAGCAGAGGCATCCTGCCAA...AGGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR GCA 90 bp GGGACACACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTAATGCCTTGGCAGGATaGCTCTGCTGGGGTGAGCAG +
Preference number: 4 (lower is better)
Translates to: GTHRASSNHCNFWEGAGLNALAG*LCWGEQ
Trigger: CTGCTCACCCCAGCAGAGGCATCCTGCCAAGGCATT...AAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTGTGTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR GCA 90 bp GGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCTTCAGGGTCTGCCCTGGGGTaGAGGAGGGACAAGAGTTGT +
Preference number: 4 (lower is better)
Translates to: GHLPITVTSGREQVLMPSGSALG*RRDKSC
Trigger: ACAACTCTTGTCCCTCCTGCACCCCAGGGCAGACCC...TGAAGGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR GCA 90 bp ACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCTGCACAGCTTCTGAGTTaGAGGAAGGCGGGCAGGCAG +
Preference number: 4 (lower is better)
Translates to: TGHLPITVTSGREQVLMPAQLLS*RKAGRQ
Trigger: CTGCCTGCCCGCCTTCCTGCAACTCAGAAGCTGTGC...AGGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR GCA 90 bp CACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCGGCGACCCTGGTAGATaGACCCACAGGATGAGACAG +
Preference number: 4 (lower is better)
Translates to: HRASSNHCNFWEGAGLDAGDPGR*THRMRQ
Trigger: CTGTCTCATCCTGTGGGTGCATCTACCAGGGTCGCC...GGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR GCA 90 bp CACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCTTCAGTGCCAGTGGTGACCTGAATCTTCCCACCTaGAGCCTGGAAGGGCAGGTA +
Preference number: 4 (lower is better)
Translates to: HCNFWEGAGLDAFSASGDLNLPT*SLEGQV
Trigger: TACCTGCCCTTCCAGGCTGCAGGTGGGAAGATTCAG...GTCACCACTGGCACTGAAGGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR GCA 90 bp GGGAAGGGACACACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGGGAGACTCGGATCTTaGCTCCATCCAGCATCACAG +
Preference number: 4 (lower is better)
Translates to: GKGHTGHLPITVTSGREQGRLGS*LHPASQ
Trigger: CTGTGATGCTGGATGGAGGCAAGATCCGAGTCTCCC...CTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTGTGTCCCTTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR GCA 90 bp CACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCTTCAGTGCCAGTGGTGACGGGAGACTCGGATCTTaGCTCCATCCAGCATCACAG +
Preference number: 4 (lower is better)
Translates to: HCNFWEGAGLDAFSASGDGRLGS*LHPASQ
Trigger: CTGTGATGCTGGATGGAGGCAAGATCCGAGTCTCCC...GTCACCACTGGCACTGAAGGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR GCA 90 bp CACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCTTCAGTGCCAGTGGTGACAGGACAGAGCGTTCCTaGCAGCAGGTAGTTGCAGGT +
Preference number: 4 (lower is better)
Translates to: HCNFWEGAGLDAFSASGDRTERS*QQVVAG
Trigger: ACCTGCAACTACCTGCTGGCAGGAACGCTCTGTCCT...GTCACCACTGGCACTGAAGGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR GCA 90 bp CACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCGGCACAGTATGTCTTTaGTGCCCCCACCCAGGCAGA +
Preference number: 4 (lower is better)
Translates to: HRASSNHCNFWEGAGLDAGTVCL*CPHPGR
Trigger: TCTGCCTGGGTGGGGGCAGCAAAGACATACTGTGCC...GGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR GCA 90 bp CACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCCACAGCTGGCAGGCTTaGAGACCAAGGAGTCACCTC +
Preference number: 4 (lower is better)
Translates to: HRASSNHCNFWEGAGLDAHSWQA*RPRSHL
Trigger: GAGGTGACTCCTTGGTCTGCAAGCCTGCCAGCTGTG...GGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR GCA 90 bp CACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCTGCTTGTGTCTCCTCTaGCAAGCACACTGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: HRASSNHCNFWEGAGLDACLCLL*QAHWAA
Trigger: GGCTGCCCAGTGTGCTTGGCAGAGGAGACACAAGCA...GGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR GCA 90 bp CACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCAGTCCTGGGCAGGAATaGACACACCGTGGGAGAGCA +
Preference number: 4 (lower is better)
Translates to: HRASSNHCNFWEGAGLDASPGQE*THRGRA
Trigger: TGCTCTCCCACGGTGTGTGCATTCCTGCCCAGGACT...GGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CCA 90 bp ACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCTGTGTTGGGTCTGCCCTaGGGTGCAGGAGGGACAAGA +
Preference number: 4 (lower is better)
Translates to: TGHLPITVTSGREQVLMPVLGLP*GAGGTR
Trigger: TCTTGTCCCTCCTGCACCCCAGGGCAGACCCAACAC...AGGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CCA 90 bp CACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCTTCAGTGCCAGTGGTGACCAGAGAAGGGGCCTGTaGACAGAGTTAGCATGCCAC +
Preference number: 4 (lower is better)
Translates to: HCNFWEGAGLDAFSASGDQRRGL*TELACH
Trigger: GTGGCATGCTAACTCTGTCCACAGGCCCCTTCTCTG...GTCACCACTGGCACTGAAGGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CCA 90 bp CACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCTTCAGTGCCAGTGGTGACAGACACAGTCACGTATaGCACCCTGGGGGTTCAGCA +
Preference number: 4 (lower is better)
Translates to: HCNFWEGAGLDAFSASGDRHSHV*HPGGSA
Trigger: TGCTGAACCCCCAGGGTGCCATACGTGACTGTGTCT...GTCACCACTGGCACTGAAGGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CCA 90 bp GGGAAGGGACACACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGTCTGGAAGTCGTCCTTaGGGTCCCCGTTGTAATCCC +
Preference number: 4 (lower is better)
Translates to: GKGHTGHLPITVTSGREQSGSRP*GPRCNP
Trigger: GGGATTACAACGGGGACCCCAAGGACGACTTCCAGA...CTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTGTGTCCCTTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CCA 90 bp CACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCTTCAGTGCCAGTGGTGACTCTTGTAAGGGACCCTaGGGGTCTAGCAGCTTGTGG +
Preference number: 4 (lower is better)
Translates to: HCNFWEGAGLDAFSASGDSCKGP*GSSSLW
Trigger: CCACAAGCTGCTAGACCCCCAGGGTCCCTTACAAGA...GTCACCACTGGCACTGAAGGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CCA 90 bp CACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCTTCAGTGCCAGTGGTGACCTCAGCACACCCTTCTaGGCACTGCTGGGGTGTATT +
Preference number: 4 (lower is better)
Translates to: HCNFWEGAGLDAFSASGDLSTPF*ALLGCI
Trigger: AATACACCCCAGCAGTGCCCAGAAGGGTGTGCTGAG...GTCACCACTGGCACTGAAGGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CCA 90 bp CACACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGAAGAGGGTCCCACCCTaGAACTTGCCAGCTGCCACC +
Preference number: 4 (lower is better)
Translates to: HTGHLPITVTSGREQVLMKRVPP*NLPAAT
Trigger: GGTGGCAGCTGGCAAGTTCCAGGGTGGGACCCTCTT...CATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CCA 90 bp GGGAAGGGACACACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGGTCCTCTGGGCATGTaGGACAGGACCCTTGACATT +
Preference number: 4 (lower is better)
Translates to: GKGHTGHLPITVTSGREQGPLGM*DRTLDI
Trigger: AATGTCAAGGGTCCTGTCCCACATGCCCAGAGGACC...CTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTGTGTCCCTTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CCA 90 bp GGGACACACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGGAGGCACATGGGCATaGCAGCTGGTGAAAGGACTC +
Preference number: 4 (lower is better)
Translates to: GTHRASSNHCNFWEGAGLGGTWA*QLVKGL
Trigger: GAGTCCTTTCACCAGCTGCCATGCCCATGTGCCTCC...AAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTGTGTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CCA 90 bp GGGAAGGGACACACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGAGTATTCAGTCCCTGTaGGTGGCTCATGGCAGGGTG +
Preference number: 4 (lower is better)
Translates to: GKGHTGHLPITVTSGREQSIQSL*VAHGRV
Trigger: CACCCTGCCATGAGCCACCCACAGGGACTGAATACT...CTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTGTGTCCCTTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CCA 90 bp ACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCTAGTGGCCACAGCCAGTaGGATGACAGGCCTGAACGC +
Preference number: 4 (lower is better)
Translates to: TGHLPITVTSGREQVLMPSGHSQ*DDRPER
Trigger: GCGTTCAGGCCTGTCATCCCACTGGCTGTGGCCACT...AGGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CCA 90 bp GGGACACACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTTTGGGTGACAGACGCTaGCCAGGACATAGGAGCAGG +
Preference number: 4 (lower is better)
Translates to: GTHRASSNHCNFWEGAGLLGDRR*PGHRSR
Trigger: CCTGCTCCTATGTCCTGGCCAGCGTCTGTCACCCAA...AAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTGTGTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CCA 90 bp CACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCTTGGGTGACAGACGCTaGCCAGGACATAGGAGCAGG +
Preference number: 4 (lower is better)
Translates to: HRASSNHCNFWEGAGLDALGDRR*PGHRSR
Trigger: CCTGCTCCTATGTCCTGGCCAGCGTCTGTCACCCAA...GGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CCA 90 bp GGGAAGGGACACACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGACAGACATGGCCAGATaGGCAGCCAGCTTCATGGCA +
Preference number: 4 (lower is better)
Translates to: GKGHTGHLPITVTSGREQTDMAR*AASFMA
Trigger: TGCCATGAAGCTGGCTGCCCATCTGGCCATGTCTGT...CTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTGTGTCCCTTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR TCA 90 bp CACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCCATCCCAGTCATAGGTaGCCACCAGCCCAAAGTCCA +
Preference number: 4 (lower is better)
Translates to: HRASSNHCNFWEGAGLDAHPSHR*PPAQSP
Trigger: TGGACTTTGGGCTGGTGGTCACCTATGACTGGGATG...GGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR TCA 90 bp CACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCTGGAAGGGCAGGTACTaGAGGACGCCATCTATCAGC +
Preference number: 4 (lower is better)
Translates to: HRASSNHCNFWEGAGLDAWKGRY*RTPSIS
Trigger: GCTGATAGATGGCGTCCTTCAGTACCTGCCCTTCCA...GGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076648.8
CDS-3UTR TCA 90 bp GGGAAGGGACACACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTAATGAGGGTCTCCTaGTGCCTGGCAGGTAGTAGT +
Preference number: 4 (lower is better)
Translates to: GKGHTGHLPITVTSGREQVMRVS*CLAGSS
Trigger: ACTACTACCTGCCAGGCATCAGGAGACCCTCATTAC...CTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTGTGTCCCTTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR TCA 90 bp CACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCTTCAGTGCCAGTGGTGACGTAATGAGGGTCTCCTaGTGCCTGGCAGGTAGTAGT +
Preference number: 4 (lower is better)
Translates to: HCNFWEGAGLDAFSASGDVMRVS*CLAGSS
Trigger: ACTACTACCTGCCAGGCATCAGGAGACCCTCATTAC...GTCACCACTGGCACTGAAGGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR TCA 90 bp GGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCTTCATCTCCTGCAGGACAGTaGACTGGTGTAGACCAGGCC +
Preference number: 4 (lower is better)
Translates to: GHLPITVTSGREQVLMPSSPAGQ*TGVDQA
Trigger: GGCCTGGTCTACACCAGTTCACTGTCCTGCAGGAGA...TGAAGGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR TCA 90 bp GGGAAGGGACACACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGACACCCTCACCACCTTaGACTTTGCAGGTCTCCTGT +
Preference number: 4 (lower is better)
Translates to: GKGHTGHLPITVTSGREQTPSPP*TLQVSC
Trigger: ACAGGAGACCTGCAAAGTTCAAGGTGGTGAGGGTGT...CTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTGTGTCCCTTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR TCA 90 bp CACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCACACAGGCAAGGCCATaGGAACTCCATTCACCCGGA +
Preference number: 4 (lower is better)
Translates to: HRASSNHCNFWEGAGLDATQARP*ELHSPG
Trigger: TCCGGGTGAATGGAGTTCTCATGGCCTTGCCTGTGT...GGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR TCA 90 bp GGGACACACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTAACTCGGGATGGACATaGGGATGTGGGCATCGCCAT +
Preference number: 4 (lower is better)
Translates to: GTHRASSNHCNFWEGAGLNSGWT*GCGHRH
Trigger: ATGGCGATGCCCACATCCTCATGTCCATCCCGAGTT...AAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTGTGTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR GCA 90 bp GGGAAGGGACACACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGCGTGTTCCACTTTTGTaGACACGTAGGCGACCCTCA +
Preference number: 4 (lower is better)
Translates to: GKGHTGHLPITVTSGREQRVPLL*TRRRPS
Trigger: TGAGGGTCGCCTACGTGTGCACAAAAGTGGAACACG...CTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTGTGTCCCTTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR GCA 90 bp ACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCTCACCCTTCTGGGCACTaGTGGGGTGTATTCAGAGCC +
Preference number: 4 (lower is better)
Translates to: TGHLPITVTSGREQVLMPHPSGH*WGVFRA
Trigger: GGCTCTGAATACACCCCAGCAGTGCCCAGAAGGGTG...AGGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR GCA 90 bp ACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCTGGCACAGTATGTCTTTaGTGCCCCCACCCAGGCAGA +
Preference number: 4 (lower is better)
Translates to: TGHLPITVTSGREQVLMPGTVCL*CPHPGR
Trigger: TCTGCCTGGGTGGGGGCAGCAAAGACATACTGTGCC...AGGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR GCA 90 bp CACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCTTCAGTGCCAGTGGTGACCTTGTTCCTCAGGTGTaGAGGGTTTTGGGCAAGGCT +
Preference number: 4 (lower is better)
Translates to: HCNFWEGAGLDAFSASGDLVPQV*RVLGKA
Trigger: AGCCTTGCCCAAAACCCTGCACACCTGAGGAACAAG...GTCACCACTGGCACTGAAGGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR GCA 90 bp GGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCTTCAATAGGGCTCACAGTCTaGCCCTTCCTGGCAGGTGAC +
Preference number: 4 (lower is better)
Translates to: GHLPITVTSGREQVLMPSIGLTV*PFLAGD
Trigger: GTCACCTGCCAGGAAGGGGCAGACTGTGAGCCCTAT...TGAAGGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR GCA 90 bp ACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCTCACTGCTGCCCCAGCTaGCTGACAGGCTGCAGTATA +
Preference number: 4 (lower is better)
Translates to: TGHLPITVTSGREQVLMPHCCPS*LTGCSI
Trigger: TATACTGCAGCCTGTCAGGCAGCTGGGGCAGCAGTG...AGGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR GCA 90 bp ACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCTAGTCCTGGGCAGGAATaGACACACCGTGGGAGAGCA +
Preference number: 4 (lower is better)
Translates to: TGHLPITVTSGREQVLMPSPGQE*THRGRA
Trigger: TGCTCTCCCACGGTGTGTGCATTCCTGCCCAGGACT...AGGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR GCA 90 bp CACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCAGAAACAGCGCTCGCTaGAGTCTGAGGACATCAGGG +
Preference number: 4 (lower is better)
Translates to: HRASSNHCNFWEGAGLDARNSAR*SLRTSG
Trigger: CCCTGATGTCCTCAGACTGCAGCGAGCGCTGTTTCT...GGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CCA 90 bp CACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCACTCTGCCACACACCTaGCCTTCCCACTCACCATCT +
Preference number: 4 (lower is better)
Translates to: HRASSNHCNFWEGAGLDATLPHT*PSHSPS
Trigger: AGATGGTGAGTGGGAAGGCCAGGTGTGTGGCAGAGT...GGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CCA 90 bp CACACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGGGGTCCAGGAATTCATaGCAGGCAGAGAAGGGGCCT +
Preference number: 4 (lower is better)
Translates to: HTGHLPITVTSGREQVLMGSRNS*QAEKGP
Trigger: AGGCCCCTTCTCTGCCTGCCATGAATTCCTGGACCC...CATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CCA 90 bp GGGAAGGGACACACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGAGGACATGGGGCAGCTaGCTGGTAATCTCCAGTTCT +
Preference number: 4 (lower is better)
Translates to: GKGHTGHLPITVTSGREQRTWGS*LVISSS
Trigger: AGAACTGGAGATTACCAGCCAGCTGCCCCATGTCCT...CTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTGTGTCCCTTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CCA 90 bp CACACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGTGGCTGGACAGGACATaGGGCAGCTGGCTGGTAATC +
Preference number: 4 (lower is better)
Translates to: HTGHLPITVTSGREQVLMWLDRT*GSWLVI
Trigger: GATTACCAGCCAGCTGCCCCATGTCCTGTCCAGCCA...CATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CCA 90 bp GGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCTTCATGGCTGGACAGGACATaGGGCAGCTGGCTGGTAATC +
Preference number: 4 (lower is better)
Translates to: GHLPITVTSGREQVLMPSWLDRT*GSWLVI
Trigger: GATTACCAGCCAGCTGCCCCATGTCCTGTCCAGCCA...TGAAGGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CCA 90 bp GGGACACACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTATAGCAGCTGTTGGCTaGACAGGACATGGGGCAGCT +
Preference number: 4 (lower is better)
Translates to: GTHRASSNHCNFWEGAGLIAAVG*TGHGAA
Trigger: AGCTGCCCCATGTCCTGTCCAGCCAACAGCTGCTAT...AAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTGTGTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CCA 90 bp GGGACACACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATCATAGCAGCTGTTaGCTGGACAGGACATGGGGC +
Preference number: 4 (lower is better)
Translates to: GTHRASSNHCNFWEGAGLDHSSC*LDRTWG
Trigger: GCCCCATGTCCTGTCCAGCCAACAGCTGCTATGATC...AAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTGTGTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CCA 90 bp CACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCTTCAGTGCCAGTGGTGACAGCCAGGTCGTCATCTaGGTTCCCATTGAAGTTCCC +
Preference number: 4 (lower is better)
Translates to: HCNFWEGAGLDAFSASGDSQVVI*VPIEVP
Trigger: GGGAACTTCAATGGGAACCCAGATGACGACCTGGCT...GTCACCACTGGCACTGAAGGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CCA 90 bp CACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCTTCAGTGCCAGTGGTGACATAGTGGCTGTTAGGTaGGCAGGTCAGTGGGCAAAG +
Preference number: 4 (lower is better)
Translates to: HCNFWEGAGLDAFSASGDIVAVR*AGQWAK
Trigger: CTTTGCCCACTGACCTGCCCACCTAACAGCCACTAT...GTCACCACTGGCACTGAAGGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CCA 90 bp GGGAAGGGACACACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTCCACAGGACAGTaGGCATCCGTAGGAACATTG +
Preference number: 4 (lower is better)
Translates to: GKGHTGHLPITVTSGREQVSTGQ*ASVGTL
Trigger: CAATGTTCCTACGGATGCCCACTGTCCTGTGGAGAC...CTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTGTGTCCCTTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CCA 90 bp GGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCTTCAGGGTCTCCTGATGCCTaGCAGGTAGTAGTGCCCACA +
Preference number: 4 (lower is better)
Translates to: GHLPITVTSGREQVLMPSGSPDA*QVVVPT
Trigger: TGTGGGCACTACTACCTGCCAGGCATCAGGAGACCC...TGAAGGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CCA 90 bp CACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCCTCAGCACACCCTTCTaGGCACTGCTGGGGTGTATT +
Preference number: 4 (lower is better)
Translates to: HRASSNHCNFWEGAGLDALSTPF*ALLGCI
Trigger: AATACACCCCAGCAGTGCCCAGAAGGGTGTGCTGAG...GGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CCA 90 bp CACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCTTCAGTGCCAGTGGTGACGGTGATACCATGGCATaGGTCTTTGGTGACGCAGGT +
Preference number: 4 (lower is better)
Translates to: HCNFWEGAGLDAFSASGDGDTMA*VFGDAG
Trigger: ACCTGCGTCACCAAAGACCCATGCCATGGTATCACC...GTCACCACTGGCACTGAAGGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CCA 90 bp CACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCTTCAGTGCCAGTGGTGACTTTGCAGGTCTCCTGTaGTCGGCAGGTGATACCATG +
Preference number: 4 (lower is better)
Translates to: HCNFWEGAGLDAFSASGDFAGLL*SAGDTM
Trigger: CATGGTATCACCTGCCGACCACAGGAGACCTGCAAA...GTCACCACTGGCACTGAAGGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CCA 90 bp CACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCGGTCCTCTGGGCATGTaGGACAGGACCCTTGACATT +
Preference number: 4 (lower is better)
Translates to: HRASSNHCNFWEGAGLDAGPLGM*DRTLDI
Trigger: AATGTCAAGGGTCCTGTCCCACATGCCCAGAGGACC...GGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CCA 90 bp GGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCTTCAGGAGGCACATGGGCATaGCAGCTGGTGAAAGGACTC +
Preference number: 4 (lower is better)
Translates to: GHLPITVTSGREQVLMPSGGTWA*QLVKGL
Trigger: GAGTCCTTTCACCAGCTGCCATGCCCATGTGCCTCC...TGAAGGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CCA 90 bp GGGAAGGGACACACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGAGTTTCTGGTCCAGATaGAAGGGCAGAGCCACGAAC +
Preference number: 4 (lower is better)
Translates to: GKGHTGHLPITVTSGREQSFWSR*KGRATN
Trigger: GTTCGTGGCTCTGCCCTTCCATCTGGACCAGAAACT...CTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTGTGTCCCTTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CCA 90 bp GGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCTTCAGCATTGGTCACAGCCTaGAGCTCCGCCCACTTTCCA +
Preference number: 4 (lower is better)
Translates to: GHLPITVTSGREQVLMPSALVTA*SSAHFP
Trigger: TGGAAAGTGGGCGGAGCTCCAGGCTGTGACCAATGC...TGAAGGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CCA 90 bp ACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCTGCATTGGTCACAGCCTaGAGCTCCGCCCACTTTCCA +
Preference number: 4 (lower is better)
Translates to: TGHLPITVTSGREQVLMPALVTA*SSAHFP
Trigger: TGGAAAGTGGGCGGAGCTCCAGGCTGTGACCAATGC...AGGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CCA 90 bp GGGACACACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTCTCATCTCCAGGTTTTaGGTGACAGACGCTGGCCAG +
Preference number: 4 (lower is better)
Translates to: GTHRASSNHCNFWEGAGLLISRF*VTDAGQ
Trigger: CTGGCCAGCGTCTGTCACCCAAAACCTGGAGATGAG...AAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTGTGTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CCA 90 bp CACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCCTCATCTCCAGGTTTTaGGTGACAGACGCTGGCCAG +
Preference number: 4 (lower is better)
Translates to: HRASSNHCNFWEGAGLDALISRF*VTDAGQ
Trigger: CTGGCCAGCGTCTGTCACCCAAAACCTGGAGATGAG...GGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CCA 90 bp GGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCTTCAGTCACCACCACACGCTaGGGATCTCCAGCTGAGTTC +
Preference number: 4 (lower is better)
Translates to: GHLPITVTSGREQVLMPSVTTTR*GSPAEF
Trigger: GAACTCAGCTGGAGATCCCCAGCGTGTGGTGGTGAC...TGAAGGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CCA 90 bp CACACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGGTCACCACCACACGCTaGGGATCTCCAGCTGAGTTC +
Preference number: 4 (lower is better)
Translates to: HTGHLPITVTSGREQVLMVTTTR*GSPAEF
Trigger: GAACTCAGCTGGAGATCCCCAGCGTGTGGTGGTGAC...CATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CCA 90 bp CACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCTGGGAGAGCAGGAAGTaGTCATCGCACTCACACCCT +
Preference number: 4 (lower is better)
Translates to: HRASSNHCNFWEGAGLDAWESRK*SSHSHP
Trigger: AGGGTGTGAGTGCGATGACCACTTCCTGCTCTCCCA...GGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CCA 90 bp GGGAAGGGACACACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGTGTCAGACCGTTGTTTaGGGAGCAGAAACAGCGCTC +
Preference number: 4 (lower is better)
Translates to: GKGHTGHLPITVTSGREQCQTVV*GAETAL
Trigger: GAGCGCTGTTTCTGCTCCCCAAACAACGGTCTGACA...CTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTGTGTCCCTTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CCA 90 bp CACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCACAGACATGGCCAGATaGGCAGCCAGCTTCATGGCA +
Preference number: 4 (lower is better)
Translates to: HRASSNHCNFWEGAGLDATDMAR*AASFMA
Trigger: TGCCATGAAGCTGGCTGCCCATCTGGCCATGTCTGT...GGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR TCA 90 bp GGGACACACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTTGGCAGGGTCTCATCTaGTCCACACAGTTCAGCCAT +
Preference number: 4 (lower is better)
Translates to: GTHRASSNHCNFWEGAGLWQGLI*STQFSH
Trigger: ATGGCTGAACTGTGTGGATCAGATGAGACCCTGCCA...AAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTGTGTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR TCA 90 bp CACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCTGGCAGGGTCTCATCTaGTCCACACAGTTCAGCCAT +
Preference number: 4 (lower is better)
Translates to: HRASSNHCNFWEGAGLDAWQGLI*STQFSH
Trigger: ATGGCTGAACTGTGTGGATCAGATGAGACCCTGCCA...GGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR TCA 90 bp GGGACACACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTTTTTGGCTTCCACACTaGAGGCTGGCAGGGTCTCAT +
Preference number: 4 (lower is better)
Translates to: GTHRASSNHCNFWEGAGLFWLPH*RLAGSH
Trigger: ATGAGACCCTGCCAGCCTTCAGTGTGGAAGCCAAAA...AAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTGTGTCCC
53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR TCA 90 bp CACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCTTCAGTGCCAGTGGTGACTGTAGGCATAGACTGTaGCCAAGCCCACATAGGAGA +
Preference number: 4 (lower is better)
Translates to: HCNFWEGAGLDAFSASGDCRHRL*PSPHRR
Trigger: TCTCCTATGTGGGCTTGGTCACAGTCTATGCCTACA...GTCACCACTGGCACTGAAGGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR TCA 90 bp GGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCTTCAGATGCACCCACAGGATaGGACAGGCACACAATCACC +
Preference number: 4 (lower is better)
Translates to: GHLPITVTSGREQVLMPSDAPTG*DRHTIT
Trigger: GGTGATTGTGTGCCTGTCTCATCCTGTGGGTGCATC...TGAAGGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR TCA 90 bp GGGACACACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTCAGAACTGCTCCCCATaGTATTTGTCCTGCAGCTCG +
Preference number: 4 (lower is better)
Translates to: GTHRASSNHCNFWEGAGLQNCSP*YLSCSS
Trigger: CGAGCTGCAGGACAAATATCATGGGGAGCAGTTCTG...AAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTGTGTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR TCA 90 bp CACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCTTCAGTGCCAGTGGTGACGCTGGCAGTTTTCAATaGGAACTGACTCCTCTGGCT +
Preference number: 4 (lower is better)
Translates to: HCNFWEGAGLDAFSASGDAGSFQ*ELTPLA
Trigger: AGCCAGAGGAGTCAGTTCTCATTGAAAACTGCCAGC...GTCACCACTGGCACTGAAGGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR TCA 90 bp GGGACACACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTACACCCTCACCACCTTaGACTTTGCAGGTCTCCTGT +
Preference number: 4 (lower is better)
Translates to: GTHRASSNHCNFWEGAGLTPSPP*TLQVSC
Trigger: ACAGGAGACCTGCAAAGTTCAAGGTGGTGAGGGTGT...AAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTGTGTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR TCA 90 bp ACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCTACACAGGCAAGGCCATaGGAACTCCATTCACCCGGA +
Preference number: 4 (lower is better)
Translates to: TGHLPITVTSGREQVLMPTQARP*ELHSPG
Trigger: TCCGGGTGAATGGAGTTCTCATGGCCTTGCCTGTGT...AGGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR TCA 90 bp ACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCTCCTCCAGGTCCACAATaGCACCTCTTAGAGCAGGTG +
Preference number: 4 (lower is better)
Translates to: TGHLPITVTSGREQVLMPPPGPQ*HLLEQV
Trigger: CACCTGCTCTAAGAGGTGTCATTGTGGACCTGGAGG...AGGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR TCA 90 bp CACACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCTCCAGGTCCACAATaGCACCTCTTAGAGCAGGTG +
Preference number: 4 (lower is better)
Translates to: HTGHLPITVTSGREQVLMPPGPQ*HLLEQV
Trigger: CACCTGCTCTAAGAGGTGTCATTGTGGACCTGGAGG...CATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR TCA 90 bp GGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCTTCACCCGTCCATCAAGAGTaGCATAATGGAGGCCTCCGT +
Preference number: 4 (lower is better)
Translates to: GHLPITVTSGREQVLMPSPVHQE*HNGGLR
Trigger: ACGGAGGCCTCCATTATGTCACTCTTGATGGACGGG...TGAAGGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR TCA 90 bp GGGAAGGGACACACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGCTGGGGATCTCCAGCTaGGTTCTTTTCGAGCACAAT +
Preference number: 4 (lower is better)
Translates to: GKGHTGHLPITVTSGREQLGISS*VLFEHN
Trigger: ATTGTGCTCGAAAAGAACTCAGCTGGAGATCCCCAG...CTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTGTGTCCCTTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR TCA 90 bp ACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCTAACTCGGGATGGACATaGGGATGTGGGCATCGCCAT +
Preference number: 4 (lower is better)
Translates to: TGHLPITVTSGREQVLMPNSGWT*GCGHRH
Trigger: ATGGCGATGCCCACATCCTCATGTCCATCCCGAGTT...AGGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR TCA 90 bp ACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCTTGGAAGGGCAGGTACTaGAGGACGCCATTTACCAGC +
Preference number: 4 (lower is better)
Translates to: TGHLPITVTSGREQVLMPWKGRY*RTPFTS
Trigger: GCTGGTAAATGGCGTCCTTCAGTACCTGCCCTTCCA...AGGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000138392.8
CDS-3UTR GCA 90 bp GGGACACACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTCAGATGCACACTGAATaGCTTGGCAGGATGCCTCTG +
Preference number: 4 (lower is better)
Translates to: GTHRASSNHCNFWEGAGLQMHTE*LGRMPL
Trigger: CAGAGGCATCCTGCCAAGGCATTCAGTGTGCATCTG...AAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTGTGTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR GCA 90 bp GGGACACACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGGTCTCCATTATAGTTaGCGCACAGCCCGCACACTT +
Preference number: 4 (lower is better)
Translates to: GTHRASSNHCNFWEGAGLGLHYS*RTARTL
Trigger: AAGTGTGCGGGCTGTGCGGCAACTATAATGGAGACC...AAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTGTGTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR GCA 90 bp CACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCTGGACAGAGTTAGCATaGCACAGAGACGGTCTCCCT +
Preference number: 4 (lower is better)
Translates to: HRASSNHCNFWEGAGLDAWTELA*HRDGLP
Trigger: AGGGAGACCGTCTCTGTGGCATGCTAACTCTGTCCA...GGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR GCA 90 bp GGGACACACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTATCCTGTTGTGTCCCTaGAGGTCACCTTCTGAGTGG +
Preference number: 4 (lower is better)
Translates to: GTHRASSNHCNFWEGAGLILLCP*RSPSEW
Trigger: CCACTCAGAAGGTGACCTGCAGGGACACAACAGGAT...AAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTGTGTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR GCA 90 bp GGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCTTCACTGAATCTTCCCACCTaGAGCCTGGAAGGGCAGGTA +
Preference number: 4 (lower is better)
Translates to: GHLPITVTSGREQVLMPSLNLPT*SLEGQV
Trigger: TACCTGCCCTTCCAGGCTGCAGGTGGGAAGATTCAG...TGAAGGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR GCA 90 bp GGGAAGGGACACACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGCGGTTTCCACAGGTTTaGGCTAGCACATACACACAG +
Preference number: 4 (lower is better)
Translates to: GKGHTGHLPITVTSGREQRFPQV*ASTYTQ
Trigger: CTGTGTGTATGTGCTAGCGCAAACCTGTGGAAACCG...CTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTGTGTCCCTTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR GCA 90 bp GGGACACACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTCAGGCCTCATTCTCCTaGAGGACAGTGAACTGGTGT +
Preference number: 4 (lower is better)
Translates to: GTHRASSNHCNFWEGAGLQASFS*RTVNWC
Trigger: ACACCAGTTCACTGTCCTGCAGGAGAATGAGGCCTG...AAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTGTGTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR GCA 90 bp GGGAAGGGACACACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGACACCTGTCCTGGTTTaGAGCTATGATCCTGGCACA +
Preference number: 4 (lower is better)
Translates to: GKGHTGHLPITVTSGREQTPVLV*SYDPGT
Trigger: TGTGCCAGGATCATAGCTGCAAACCAGGACAGGTGT...CTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTGTGTCCCTTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR GCA 90 bp ACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCTGCAGGTAGTTGCAGGTaGCCTGGAAGTCAAAGCTCC +
Preference number: 4 (lower is better)
Translates to: TGHLPITVTSGREQVLMPAGSCR*PGSQSS
Trigger: GGAGCTTTGACTTCCAGGGCACCTGCAACTACCTGC...AGGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR GCA 90 bp CACACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGAGGACAGAGCGTTCCTaGCAGCAGGTAGTTGCAGGT +
Preference number: 4 (lower is better)
Translates to: HTGHLPITVTSGREQVLMRTERS*QQVVAG
Trigger: ACCTGCAACTACCTGCTGGCAGGAACGCTCTGTCCT...CATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR GCA 90 bp GGGACACACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATTCTTGTTGTAGTTaGCGCACAGGCCACAGAGGG +
Preference number: 4 (lower is better)
Translates to: GTHRASSNHCNFWEGAGLDSCCS*RTGHRG
Trigger: CCCTCTGTGGCCTGTGCGGCAACTACAACAAGAATC...AAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTGTGTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CCA 90 bp CACACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGACTCTGCCACACACCTaGCCTTCCCACTCACCATCT +
Preference number: 4 (lower is better)
Translates to: HTGHLPITVTSGREQVLMTLPHT*PSHSPS
Trigger: AGATGGTGAGTGGGAAGGCCAGGTGTGTGGCAGAGT...CATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CCA 90 bp CACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCGAGGGACAAGAGTTGTaGCAGCCATCATCACACAGG +
Preference number: 4 (lower is better)
Translates to: HRASSNHCNFWEGAGLDAEGQEL*QPSSHR
Trigger: CCTGTGTGATGATGGCTGCCACAACTCTTGTCCCTC...GGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CCA 90 bp GGGACACACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGAGGGACAAGAGTTGTaGCAGCCATCATCACACAGG +
Preference number: 4 (lower is better)
Translates to: GTHRASSNHCNFWEGAGLEGQEL*QPSSHR
Trigger: CCTGTGTGATGATGGCTGCCACAACTCTTGTCCCTC...AAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTGTGTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CCA 90 bp CACACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCAGAGAAGGGGCCTGTaGACAGAGTTAGCATGCCAC +
Preference number: 4 (lower is better)
Translates to: HTGHLPITVTSGREQVLMQRRGL*TELACH
Trigger: GTGGCATGCTAACTCTGTCCACAGGCCCCTTCTCTG...CATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CCA 90 bp CACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCTTCAGTGCCAGTGGTGACCATCTAGGAAAGGCTTaGGGTCCAGGAATTCATGGC +
Preference number: 4 (lower is better)
Translates to: HCNFWEGAGLDAFSASGDHLGKA*GPGIHG
Trigger: GCCATGAATTCCTGGACCCCAAGCCTTTCCTAGATG...GTCACCACTGGCACTGAAGGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CCA 90 bp ACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCTATAGCAGCTGTTGGCTaGACAGGACATGGGGCAGCT +
Preference number: 4 (lower is better)
Translates to: TGHLPITVTSGREQVLMPIAAVG*TGHGAA
Trigger: AGCTGCCCCATGTCCTGTCCAGCCAACAGCTGCTAT...AGGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CCA 90 bp GGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCTTCAGATCATAGCAGCTGTTaGCTGGACAGGACATGGGGC +
Preference number: 4 (lower is better)
Translates to: GHLPITVTSGREQVLMPSDHSSC*LDRTWG
Trigger: GCCCCATGTCCTGTCCAGCCAACAGCTGCTATGATC...TGAAGGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CCA 90 bp CACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCAGCCAGGTCGTCATCTaGGTTCCCATTGAAGTTCCC +
Preference number: 4 (lower is better)
Translates to: HRASSNHCNFWEGAGLDASQVVI*VPIEVP
Trigger: GGGAACTTCAATGGGAACCCAGATGACGACCTGGCT...GGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CCA 90 bp GGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCTTCAAGACACAGTCACGTATaGCACCCTGGGGGTTCAGCA +
Preference number: 4 (lower is better)
Translates to: GHLPITVTSGREQVLMPSRHSHV*HPGGSA
Trigger: TGCTGAACCCCCAGGGTGCCATACGTGACTGTGTCT...TGAAGGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CCA 90 bp CACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCGTCTCCACAGGACAGTaGGCATCCGTAGGAACATTG +
Preference number: 4 (lower is better)
Translates to: HRASSNHCNFWEGAGLDAVSTGQ*ASVGTL
Trigger: CAATGTTCCTACGGATGCCCACTGTCCTGTGGAGAC...GGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CCA 90 bp CACACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGTCTGGAAGTCGTCCTTaGGGTCCCCGTTGTAATCCC +
Preference number: 4 (lower is better)
Translates to: HTGHLPITVTSGREQVLMSGSRP*GPRCNP
Trigger: GGGATTACAACGGGGACCCCAAGGACGACTTCCAGA...CATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CCA 90 bp CACACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGTCTTGTAAGGGACCCTaGGGGTCTAGCAGCTTGTGG +
Preference number: 4 (lower is better)
Translates to: HTGHLPITVTSGREQVLMSCKGP*GSSSLW
Trigger: CCACAAGCTGCTAGACCCCCAGGGTCCCTTACAAGA...CATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CCA 90 bp GGGAAGGGACACACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGCATCATGCCTTTGCCTaGTTGGCACACACAATGCTG +
Preference number: 4 (lower is better)
Translates to: GKGHTGHLPITVTSGREQHHAFA*LAHTML
Trigger: CAGCATTGTGTGTGCCAACCAGGCAAAGGCATGATG...CTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTGTGTCCCTTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CCA 90 bp GGGACACACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGGTGATACCATGGCATaGGTCTTTGGTGACGCAGGT +
Preference number: 4 (lower is better)
Translates to: GTHRASSNHCNFWEGAGLGDTMA*VFGDAG
Trigger: ACCTGCGTCACCAAAGACCCATGCCATGGTATCACC...AAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTGTGTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CCA 90 bp CACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCAGTTTCTGGTCCAGATaGAAGGGCAGAGCCACGAAC +
Preference number: 4 (lower is better)
Translates to: HRASSNHCNFWEGAGLDASFWSR*KGRATN
Trigger: GTTCGTGGCTCTGCCCTTCCATCTGGACCAGAAACT...GGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CCA 90 bp ACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCTTGGGAGAGCAGGAAGTaGTCATCGCACTCACACCCT +
Preference number: 4 (lower is better)
Translates to: TGHLPITVTSGREQVLMPWESRK*SSHSHP
Trigger: AGGGTGTGAGTGCGATGACCACTTCCTGCTCTCCCA...AGGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CCA 90 bp CACACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGTCTCGGACTCCAGCCTaGATCTCACAGACATGGCCA +
Preference number: 4 (lower is better)
Translates to: HTGHLPITVTSGREQVLMSRTPA*ISQTWP
Trigger: TGGCCATGTCTGTGAGATCCAGGCTGGAGTCCGAGA...CATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CCA 90 bp ACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCTTCTCGGACTCCAGCCTaGATCTCACAGACATGGCCA +
Preference number: 4 (lower is better)
Translates to: TGHLPITVTSGREQVLMPSRTPA*ISQTWP
Trigger: TGGCCATGTCTGTGAGATCCAGGCTGGAGTCCGAGA...AGGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CCA 90 bp ACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCTAGGCCCCACACAGCATaGCTGCAAGGTCATCACCAA +
Preference number: 4 (lower is better)
Translates to: TGHLPITVTSGREQVLMPRPHTA*LQGHHQ
Trigger: TTGGTGATGACCTTGCAGCCATGCTGTGTGGGGCCT...AGGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CCA 90 bp GGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCTTCAAGGCCCCACACAGCATaGCTGCAAGGTCATCACCAA +
Preference number: 4 (lower is better)
Translates to: GHLPITVTSGREQVLMPSRPHTA*LQGHHQ
Trigger: TTGGTGATGACCTTGCAGCCATGCTGTGTGGGGCCT...TGAAGGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR TCA 90 bp GGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCTTCATTTTGGCTTCCACACTaGAGGCTGGCAGGGTCTCAT +
Preference number: 4 (lower is better)
Translates to: GHLPITVTSGREQVLMPSFWLPH*RLAGSH
Trigger: ATGAGACCCTGCCAGCCTTCAGTGTGGAAGCCAAAA...TGAAGGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR TCA 90 bp ACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCTCAGAACTGCTCCCCATaGTATTTGTCCTGCAGCTCG +
Preference number: 4 (lower is better)
Translates to: TGHLPITVTSGREQVLMPQNCSP*YLSCSS
Trigger: CGAGCTGCAGGACAAATATCATGGGGAGCAGTTCTG...AGGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR TCA 90 bp CACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCGCTGGCAGTTTTCAATaGGAACTGACTCCTCTGGCT +
Preference number: 4 (lower is better)
Translates to: HRASSNHCNFWEGAGLDAAGSFQ*ELTPLA
Trigger: AGCCAGAGGAGTCAGTTCTCATTGAAAACTGCCAGC...GGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR TCA 90 bp CACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCGTGGGACAGGACCCTTaGCATTCATGCCAACAAAGA +
Preference number: 4 (lower is better)
Translates to: HRASSNHCNFWEGAGLDAVGQDP*HSCQQR
Trigger: TCTTTGTTGGCATGAATGTCAAGGGTCCTGTCCCAC...GGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR TCA 90 bp CACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCCTGGGGATCTCCAGCTaGGTTCTTTTCGAGCACAAT +
Preference number: 4 (lower is better)
Translates to: HRASSNHCNFWEGAGLDALGISS*VLFEHN
Trigger: ATTGTGCTCGAAAAGAACTCAGCTGGAGATCCCCAG...GGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR GCA 90 bp CACACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCAGATGCACACTGAATaGCTTGGCAGGATGCCTCTG +
Preference number: 4 (lower is better)
Translates to: HTGHLPITVTSGREQVLMQMHTE*LGRMPL
Trigger: CAGAGGCATCCTGCCAAGGCATTCAGTGTGCATCTG...CATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR GCA 90 bp GGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCTTCACGTGTTCCACTTTTGTaGACACGTAGGCGACCCTCA +
Preference number: 4 (lower is better)
Translates to: GHLPITVTSGREQVLMPSRVPLL*TRRRPS
Trigger: TGAGGGTCGCCTACGTGTGCACAAAAGTGGAACACG...TGAAGGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR GCA 90 bp GGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCTTCAGGTCTCCATTATAGTTaGCGCACAGCCCGCACACTT +
Preference number: 4 (lower is better)
Translates to: GHLPITVTSGREQVLMPSGLHYS*RTARTL
Trigger: AAGTGTGCGGGCTGTGCGGCAACTATAATGGAGACC...TGAAGGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR GCA 90 bp CACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCTTCAGTGCCAGTGGTGACCAGCTTCCAGCTATTTaGAAATTCCAAGGCATCGGG +
Preference number: 4 (lower is better)
Translates to: HCNFWEGAGLDAFSASGDQLPAI*KFQGIG
Trigger: CCCGATGCCTTGGAATTTGCAAATAGCTGGAAGCTG...GTCACCACTGGCACTGAAGGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR GCA 90 bp GGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCTTCATGGACAGAGTTAGCATaGCACAGAGACGGTCTCCCT +
Preference number: 4 (lower is better)
Translates to: GHLPITVTSGREQVLMPSWTELA*HRDGLP
Trigger: AGGGAGACCGTCTCTGTGGCATGCTAACTCTGTCCA...TGAAGGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR GCA 90 bp CACACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGATCCTGTTGTGTCCCTaGAGGTCACCTTCTGAGTGG +
Preference number: 4 (lower is better)
Translates to: HTGHLPITVTSGREQVLMILLCP*RSPSEW
Trigger: CCACTCAGAAGGTGACCTGCAGGGACACAACAGGAT...CATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR GCA 90 bp CACACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGTGCAGCAGCATAGGCTaGCAATGCATCACACAGTGG +
Preference number: 4 (lower is better)
Translates to: HTGHLPITVTSGREQVLMCSSIG*QCITQW
Trigger: CCACTGTGTGATGCATTGGCAGCCTATGCTGCTGCA...CATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR GCA 90 bp GGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCTTCATGCAGCAGCATAGGCTaGCAATGCATCACACAGTGG +
Preference number: 4 (lower is better)
Translates to: GHLPITVTSGREQVLMPSCSSIG*QCITQW
Trigger: CCACTGTGTGATGCATTGGCAGCCTATGCTGCTGCA...TGAAGGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR GCA 90 bp GGGACACACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTCGGTTTCCACAGGTTTaGGCTAGCACATACACACAG +
Preference number: 4 (lower is better)
Translates to: GTHRASSNHCNFWEGAGLRFPQV*ASTYTQ
Trigger: CTGTGTGTATGTGCTAGCGCAAACCTGTGGAAACCG...AAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTGTGTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR GCA 90 bp ACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCTCAGGCCTCATTCTCCTaGAGGACAGTGAACTGGTGT +
Preference number: 4 (lower is better)
Translates to: TGHLPITVTSGREQVLMPQASFS*RTVNWC
Trigger: ACACCAGTTCACTGTCCTGCAGGAGAATGAGGCCTG...AGGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR GCA 90 bp GGGAAGGGACACACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGGTTGGCACACACAATaGTGCTGGCAGTTTTCAATG +
Preference number: 4 (lower is better)
Translates to: GKGHTGHLPITVTSGREQGWHTQ*CWQFSM
Trigger: CATTGAAAACTGCCAGCAGCATTGTGTGTGCCAACC...CTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTGTGTCCCTTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR GCA 90 bp CACACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGGATTCTTGTTGTAGTTaGCGCACAGGCCACAGAGGG +
Preference number: 4 (lower is better)
Translates to: HTGHLPITVTSGREQVLMDSCCS*RTGHRG
Trigger: CCCTCTGTGGCCTGTGCGGCAACTACAACAAGAATC...CATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR GCA 90 bp CACACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCCACACAGCATGGCTaGAAGGTCATCACCAACCAT +
Preference number: 4 (lower is better)
Translates to: HTGHLPITVTSGREQVLMPTQHG*KVITNH
Trigger: ATGGTTGGTGATGACCTTGCAGCCATGCTGTGTGGG...CATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CCA 90 bp ACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCTATAGTGGCTGTTAGGTaGGCAGGTCAGTGGGCAAAG +
Preference number: 4 (lower is better)
Translates to: TGHLPITVTSGREQVLMPIVAVR*AGQWAK
Trigger: CTTTGCCCACTGACCTGCCCACCTAACAGCCACTAT...AGGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CCA 90 bp GGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCTTCATTTGCAGGTCTCCTGTaGTCGGCAGGTGATACCATG +
Preference number: 4 (lower is better)
Translates to: GHLPITVTSGREQVLMPSFAGLL*SAGDTM
Trigger: CATGGTATCACCTGCCGACCACAGGAGACCTGCAAA...TGAAGGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CCA 90 bp GGGAAGGGACACACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGACGTGGAATTATAGTTaGGCACACACACACCCTCAC +
Preference number: 4 (lower is better)
Translates to: GKGHTGHLPITVTSGREQTWNYS*AHTHPH
Trigger: GTGAGGGTGTGTGTGTGCCCAACTATAATTCCACGT...CTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTGTGTCCCTTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CCA 90 bp CACACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCTTTCAGGAGGCACATaGGCATGGCAGCTGGTGAAA +
Preference number: 4 (lower is better)
Translates to: HTGHLPITVTSGREQVLMLSGGT*AWQLVK
Trigger: TTTCACCAGCTGCCATGCCCATGTGCCTCCTGAAAG...CATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CCA 90 bp CACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCGAGGGGACAGAAGTCTaGCTTTCTCCATTCTCCAAG +
Preference number: 4 (lower is better)
Translates to: HRASSNHCNFWEGAGLDAEGTEV*LSPFSK
Trigger: CTTGGAGAATGGAGAAAGCCAGACTTCTGTCCCCTC...GGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CCA 90 bp CACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCATGGACATGAGGATGTaGGCATCGCCATCGAAGAGA +
Preference number: 4 (lower is better)
Translates to: HRASSNHCNFWEGAGLDAMDMRM*ASPSKR
Trigger: TCTCTTCGATGGCGATGCCCACATCCTCATGTCCAT...GGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CCA 90 bp CACACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGTGTCAGACCGTTGTTTaGGGAGCAGAAACAGCGCTC +
Preference number: 4 (lower is better)
Translates to: HTGHLPITVTSGREQVLMCQTVV*GAETAL
Trigger: GAGCGCTGTTTCTGCTCCCCAAACAACGGTCTGACA...CATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CCA 90 bp CACACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGGGGCAGCCAGCTTCATaGCATGTCAGACCGTTGTTT +
Preference number: 4 (lower is better)
Translates to: HTGHLPITVTSGREQVLMGQPAS*HVRPLF
Trigger: AAACAACGGTCTGACATGCCATGAAGCTGGCTGCCC...CATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CCA 90 bp GGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCTTCAGGGCAGCCAGCTTCATaGCATGTCAGACCGTTGTTT +
Preference number: 4 (lower is better)
Translates to: GHLPITVTSGREQVLMPSGQPAS*HVRPLF
Trigger: AAACAACGGTCTGACATGCCATGAAGCTGGCTGCCC...TGAAGGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CCA 90 bp CACACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGTTGTTGTGGCAAGGCTaGACATCAGCAAGCACTCGG +
Preference number: 4 (lower is better)
Translates to: HTGHLPITVTSGREQVLMLLWQG*TSASTR
Trigger: CCGAGTGCTTGCTGATGTCCAGCCTTGCCACAACAA...CATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CCA 90 bp GGGAAGGGACACACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGTCCTGGAAGAAGATGTaGACCTTGCTCACGATCTTG +
Preference number: 4 (lower is better)
Translates to: GKGHTGHLPITVTSGREQSWKKM*TLLTIL
Trigger: CAAGATCGTGAGCAAGGTCCACATCTTCTTCCAGGA...CTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTGTGTCCCTTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CCA 90 bp GGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCTTCAGTCACCAGGCCATCCTaGAAGAAGATGTGGACCTTG +
Preference number: 4 (lower is better)
Translates to: GHLPITVTSGREQVLMPSVTRPS*KKMWTL
Trigger: CAAGGTCCACATCTTCTTCCAGGATGGCCTGGTGAC...TGAAGGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR TCA 90 bp CACACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGGTGGGACAGGACCCTTaGCATTCATGCCAACAAAGA +
Preference number: 4 (lower is better)
Translates to: HTGHLPITVTSGREQVLMVGQDP*HSCQQR
Trigger: TCTTTGTTGGCATGAATGTCAAGGGTCCTGTCCCAC...CATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR GCA 90 bp CACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCCAGCTTCCAGCTATTTaGAAATTCCAAGGCATCGGG +
Preference number: 4 (lower is better)
Translates to: HRASSNHCNFWEGAGLDAQLPAI*KFQGIG
Trigger: CCCGATGCCTTGGAATTTGCAAATAGCTGGAAGCTG...GGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR GCA 90 bp CACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCGTCACCAGGTTCAGTTaGTCCACACCCAGGTATTAT +
Preference number: 4 (lower is better)
Translates to: HRASSNHCNFWEGAGLDAVTRFS*STPRYY
Trigger: ATAATACCTGGGTGTGGAGCAACTGAACCTGGTGAC...GGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR GCA 90 bp CACACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGACACCTGTCCTGGTTTaGAGCTATGATCCTGGCACA +
Preference number: 4 (lower is better)
Translates to: HTGHLPITVTSGREQVLMTPVLV*SYDPGT
Trigger: TGTGCCAGGATCATAGCTGCAAACCAGGACAGGTGT...CATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CCA 90 bp ACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCTCATCTAGGAAAGGCTTaGGGTCCAGGAATTCATGGC +
Preference number: 4 (lower is better)
Translates to: TGHLPITVTSGREQVLMPHLGKA*GPGIHG
Trigger: GCCATGAATTCCTGGACCCCAAGCCTTTCCTAGATG...AGGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CCA 90 bp GGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCTTCAAATACATTGGAAGCTTaGCCTCCACCCTTCAGAGCC +
Preference number: 4 (lower is better)
Translates to: GHLPITVTSGREQVLMPSNTLEA*PPPFRA
Trigger: GGCTCTGAAGGGTGGAGGCCAAGCTTCCAATGTATT...TGAAGGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CCA 90 bp GGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCTTCACCACCTTCCTCACAGTaGCAAAGAGAATCGCATCCA +
Preference number: 4 (lower is better)
Translates to: GHLPITVTSGREQVLMPSPPSSQ*QRESHP
Trigger: TGGATGCGATTCTCTTTGCCACTGTGAGGAAGGTGG...TGAAGGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CCA 90 bp ACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCTCCACCTTCCTCACAGTaGCAAAGAGAATCGCATCCA +
Preference number: 4 (lower is better)
Translates to: TGHLPITVTSGREQVLMPPPSSQ*QRESHP
Trigger: TGGATGCGATTCTCTTTGCCACTGTGAGGAAGGTGG...AGGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CCA 90 bp ACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCTCATCATGCCTTTGCCTaGTTGGCACACACAATGCTG +
Preference number: 4 (lower is better)
Translates to: TGHLPITVTSGREQVLMPHHAFA*LAHTML
Trigger: CAGCATTGTGTGTGCCAACCAGGCAAAGGCATGATG...AGGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CCA 90 bp ACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCTATGGACATGAGGATGTaGGCATCGCCATCGAAGAGA +
Preference number: 4 (lower is better)
Translates to: TGHLPITVTSGREQVLMPMDMRM*ASPSKR
Trigger: TCTCTTCGATGGCGATGCCCACATCCTCATGTCCAT...AGGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CCA 90 bp GGGAAGGGACACACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGATCTTGTCATTGTTGTaGCAAGGCTGGACATCAGCA +
Preference number: 4 (lower is better)
Translates to: GKGHTGHLPITVTSGREQILSLL*QGWTSA
Trigger: TGCTGATGTCCAGCCTTGCCACAACAATGACAAGAT...CTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTGTGTCCCTTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CCA 90 bp GGGACACACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTTCCTGGAAGAAGATGTaGACCTTGCTCACGATCTTG +
Preference number: 4 (lower is better)
Translates to: GTHRASSNHCNFWEGAGLSWKKM*TLLTIL
Trigger: CAAGATCGTGAGCAAGGTCCACATCTTCTTCCAGGA...AAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTGTGTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR TCA 90 bp GGGACACACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTCACTCCTTTTTGTCTTaGATTTGCTGGGTCACAAGG +
Preference number: 4 (lower is better)
Translates to: GTHRASSNHCNFWEGAGLHSFLS*ICWVTR
Trigger: CCTTGTGACCCAGCAAATTCAAGACAAAAAGGAGTG...AAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTGTGTCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR TCA 90 bp GGGAAGGGACACACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTTTTCAATGAGAACTaGCTCCTCTGGCTCATAGTA +
Preference number: 4 (lower is better)
Translates to: GKGHTGHLPITVTSGREQVFNEN*LLWLIV
Trigger: TACTATGAGCCAGAGGAGTCAGTTCTCATTGAAAAC...CTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTGTGTCCCTTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR GCA 90 bp ACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCTGTCACCAGGTTCAGTTaGTCCACACCCAGGTATTAT +
Preference number: 4 (lower is better)
Translates to: TGHLPITVTSGREQVLMPVTRFS*STPRYY
Trigger: ATAATACCTGGGTGTGGAGCAACTGAACCTGGTGAC...AGGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR GCA 90 bp CACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCTGGCACACACAATGCTaGTGGCAGTTTTCAATGAGA +
Preference number: 4 (lower is better)
Translates to: HRASSNHCNFWEGAGLDAWHTQC*WQFSMR
Trigger: TCTCATTGAAAACTGCCAGCAGCATTGTGTGTGCCA...GGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR GCA 90 bp CACACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGGGTTGGCACACACAATaGTGCTGGCAGTTTTCAATG +
Preference number: 4 (lower is better)
Translates to: HTGHLPITVTSGREQVLMGWHTQ*CWQFSM
Trigger: CATTGAAAACTGCCAGCAGCATTGTGTGTGCCAACC...CATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CCA 90 bp GGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCTTCACAAAGTCCAATACATTaGAAGCTTGGCCTCCACCCT +
Preference number: 4 (lower is better)
Translates to: GHLPITVTSGREQVLMPSQSPIH*KLGLHP
Trigger: AGGGTGGAGGCCAAGCTTCCAATGTATTGGACTTTG...TGAAGGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CCA 90 bp GGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCTTCAACGTGGAATTATAGTTaGGCACACACACACCCTCAC +
Preference number: 4 (lower is better)
Translates to: GHLPITVTSGREQVLMPSTWNYS*AHTHPH
Trigger: GTGAGGGTGTGTGTGTGCCCAACTATAATTCCACGT...TGAAGGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CCA 90 bp GGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCTTCAGGATCACCCCAGGCTTaGCATTCAGTTATGCTTGTA +
Preference number: 4 (lower is better)
Translates to: GHLPITVTSGREQVLMPSGSPQA*HSVMLV
Trigger: TACAAGCATAACTGAATGCCAAGCCTGGGGTGATCC...TGAAGGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CCA 90 bp CACACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGGGATCACCCCAGGCTTaGCATTCAGTTATGCTTGTA +
Preference number: 4 (lower is better)
Translates to: HTGHLPITVTSGREQVLMGSPQA*HSVMLV
Trigger: TACAAGCATAACTGAATGCCAAGCCTGGGGTGATCC...CATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CCA 90 bp CACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCATCTTGTCATTGTTGTaGCAAGGCTGGACATCAGCA +
Preference number: 4 (lower is better)
Translates to: HRASSNHCNFWEGAGLDAILSLL*QGWTSA
Trigger: TGCTGATGTCCAGCCTTGCCACAACAATGACAAGAT...GGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CCA 90 bp CACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCTATGCGTCGTTGGTTTaGTCCCCATCAAAGTTTCCA +
Preference number: 4 (lower is better)
Translates to: HRASSNHCNFWEGAGLDAYASLV*SPSKFP
Trigger: TGGAAACTTTGATGGGGACCAAACCAACGACGCATA...GGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CCA 90 bp CACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCAACCATATGCGTCGTTaGTTTGGTCCCCATCAAAGT +
Preference number: 4 (lower is better)
Translates to: HRASSNHCNFWEGAGLDANHMRR*FGPHQS
Trigger: ACTTTGATGGGGACCAAACCAACGACGCATATGGTT...GGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR TCA 90 bp ACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCTCACTCCTTTTTGTCTTaGATTTGCTGGGTCACAAGG +
Preference number: 4 (lower is better)
Translates to: TGHLPITVTSGREQVLMPHSFLS*ICWVTR
Trigger: CCTTGTGACCCAGCAAATTCAAGACAAAAAGGAGTG...AGGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR GCA 90 bp ACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCTGGTATTATCTCTTCTTaGCAGCTGTTCCCAAAGTCC +
Preference number: 4 (lower is better)
Translates to: TGHLPITVTSGREQVLMPGIISS*QLFPKS
Trigger: GGACTTTGGGAACAGCTGGCAAGAAGAGATAATACC...AGGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR GCA 90 bp GGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCTTCAGGTATTATCTCTTCTTaGCAGCTGTTCCCAAAGTCC +
Preference number: 4 (lower is better)
Translates to: GHLPITVTSGREQVLMPSGIISS*QLFPKS
Trigger: GGACTTTGGGAACAGCTGGCAAGAAGAGATAATACC...TGAAGGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR GCA 90 bp GGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCTTCATGGCACACACAATGCTaGTGGCAGTTTTCAATGAGA +
Preference number: 4 (lower is better)
Translates to: GHLPITVTSGREQVLMPSWHTQC*WQFSMR
Trigger: TCTCATTGAAAACTGCCAGCAGCATTGTGTGTGCCA...TGAAGGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR GCA 90 bp CACACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCAAAACTCGGTGCCTaGTTCATAGTATGTGCCATT +
Preference number: 4 (lower is better)
Translates to: HTGHLPITVTSGREQVLMPKLGA*FIVCAI
Trigger: AATGGCACATACTATGAAGCAGGCACCGAGTTTTGG...CATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR GCA 90 bp ACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCTCCAAAACTCGGTGCCTaGTTCATAGTATGTGCCATT +
Preference number: 4 (lower is better)
Translates to: TGHLPITVTSGREQVLMPPKLGA*FIVCAI
Trigger: AATGGCACATACTATGAAGCAGGCACCGAGTTTTGG...AGGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR GCA 90 bp CACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCTTCAGTGCCAGTGGTGACATTCCCTTGTTTGTCTaGAGAACTATGTTTCTGCCT +
Preference number: 4 (lower is better)
Translates to: HCNFWEGAGLDAFSASGDIPLFV*RTMFLP
Trigger: AGGCAGAAACATAGTTCTGCAGACAAACAAGGGAAT...GTCACCACTGGCACTGAAGGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CCA 90 bp GGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCTTCAGCTTTGTCACCCTTATaGGCACACATGTCATACACA +
Preference number: 4 (lower is better)
Translates to: GHLPITVTSGREQVLMPSALSPL*AHMSYT
Trigger: TGTGTATGACATGTGTGCCCATAAGGGTGACAAAGC...TGAAGGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CCA 90 bp CACACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGGCTTTGTCACCCTTATaGGCACACATGTCATACACA +
Preference number: 4 (lower is better)
Translates to: HTGHLPITVTSGREQVLMALSPL*AHMSYT
Trigger: TGTGTATGACATGTGTGCCCATAAGGGTGACAAAGC...CATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CCA 90 bp ACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCTTATGCGTCGTTGGTTTaGTCCCCATCAAAGTTTCCA +
Preference number: 4 (lower is better)
Translates to: TGHLPITVTSGREQVLMPYASLV*SPSKFP
Trigger: TGGAAACTTTGATGGGGACCAAACCAACGACGCATA...AGGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR TCA 90 bp CACACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGGTTTTCAATGAGAACTaGCTCCTCTGGCTCATAGTA +
Preference number: 4 (lower is better)
Translates to: HTGHLPITVTSGREQVLMVFNEN*LLWLIV
Trigger: TACTATGAGCCAGAGGAGTCAGTTCTCATTGAAAAC...CATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR GCA 90 bp GGGAAGGGACACACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGATCATTTTTCTCATATaGTTGTGTCTCCTCTGCCAA +
Preference number: 4 (lower is better)
Translates to: GKGHTGHLPITVTSGREQIIFLI*LCLLCQ
Trigger: TTGGCAGAGGAGACACAAGCATATGAGAAAAATGAT...CTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTGTGTCCCTTCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CCA 90 bp ACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCTCACACACAATGCTGCTaGCAGTTTTCAATGAGAACT +
Preference number: 4 (lower is better)
Translates to: TGHLPITVTSGREQVLMPHTQCC*QFSMRT
Trigger: AGTTCTCATTGAAAACTGCCAGCAGCATTGTGTGTG...AGGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR GCA 90 bp ACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCTATTCCCTTGTTTGTCTaGAGAACTATGTTTCTGCCT +
Preference number: 4 (lower is better)
Translates to: TGHLPITVTSGREQVLMPIPLFV*RTMFLP
Trigger: AGGCAGAAACATAGTTCTGCAGACAAACAAGGGAAT...AGGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR GCA 90 bp CACACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGATCATTTTTCTCATATaGTTGTGTCTCCTCTGCCAA +
Preference number: 4 (lower is better)
Translates to: HTGHLPITVTSGREQVLMIIFLI*LCLLCQ
Trigger: TTGGCAGAGGAGACACAAGCATATGAGAAAAATGAT...CATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS GCA 90 bp CCCGCAGCCTTCACCACAGCCCAAGGAGGAGCCGGGAGCTCGCCATaGGGTTCCAAAGGCCTCCACGTTGGGGGCCACTGCTCCACTAGG +
Preference number: 5 (lower is better)
Translates to: PAAFTTAQGGAGSSP*GSKGLHVGGHCSTR
Trigger: CCTAGTGGAGCAGTGGCCCCCAACGTGGAGGCCTTTGGAACCGCATGGCGAGCTCCCGGCTCCTCCTTGGGCTGTGGTGAAGGCTGCGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS CCA 90 bp CTGGAAGGCACACGCAGCCCTCCACGCAAGGGCGAGAAGAGCAGTTaGTCGGCACAGCTTCTGAGTTGCAGGAAGGCGGGCAGGCAGGGC +
Preference number: 5 (lower is better)
Translates to: LEGTRSPPRKGEKSS*SAQLLSCRKAGRQG
Trigger: GCCCTGCCTGCCCGCCTTCCTGCAACTCAGAAGCTGTGCCGACCAACTGCTCTTCTCGCCCTTGCGTGGAGGGCTGCGTGTGCCTTCCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS CCA 90 bp TCACCATCCACAGTCACCTGTGGCCCTCGAGCCAGGCCCACAACCTaGCCTGCCACGGTCACCACCACACGCTGGGGATCTCCAGCTGAG +
Preference number: 5 (lower is better)
Translates to: SPSTVTCGPRARPTT*PATVTTTRWGSPAE
Trigger: CTCAGCTGGAGATCCCCAGCGTGTGGTGGTGACCGTGGCAGGCCAGGTTGTGGGCCTGGCTCGAGGGCCACAGGTGACTGTGGATGGTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS GCA 90 bp CACAGTGCCCCCGGCAGCCTGGCATGCAGCAGCATAGGCTGCCAATaGATCACACAGTGGCCCAGACTGACCAGGCAGCAGGCAGAGGTC +
Preference number: 5 (lower is better)
Translates to: HSAPGSLACSSIGCQ*ITQWPRLTRQQAEV
Trigger: GACCTCTGCCTGCTGCCTGGTCAGTCTGGGCCACTGTGTGATGCATTGGCAGCCTATGCTGCTGCATGCCAGGCTGCCGGGGGCACTGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS GCA 90 bp GGGATGCACAGTGCCCCCGGCAGCCTGGCATGCAGCAGCATAGGCTaGCAATGCATCACACAGTGGCCCAGACTGACCAGGCAGCAGGCA +
Preference number: 5 (lower is better)
Translates to: GMHSAPGSLACSSIG*QCITQWPRLTRQQA
Trigger: TGCCTGCTGCCTGGTCAGTCTGGGCCACTGTGTGATGCATTGGCAGCCTATGCTGCTGCATGCCAGGCTGCCGGGGGCACTGTGCATCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS TCA 90 bp CTGACCCGGGGCCAGCAGGCGACCCTGGTAGATGCACCCACAGGATaGGACAGGCACACAATCACCACCACTGGCCACGAAGCCTGGAAG +
Preference number: 5 (lower is better)
Translates to: LTRGQQATLVDAPTG*DRHTITTTGHEAWK
Trigger: CTTCCAGGCTTCGTGGCCAGTGGTGGTGATTGTGTGCCTGTCTCATCCTGTGGGTGCATCTACCAGGGTCGCCTGCTGGCCCCGGGTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS GCA 90 bp TGCCGCAGGCGTCGGGACCGCGGAAGGGTTCTTGTTCCTCAGGTGTaGAGGGTTTTGGGCAAGGCTCAGGCTCGCATTGGTCACAGCCTG +
Preference number: 5 (lower is better)
Translates to: CRRRRDRGRVLVPQV*RVLGKAQARIGHSL
Trigger: CAGGCTGTGACCAATGCGAGCCTGAGCCTTGCCCAAAACCCTGCACACCTGAGGAACAAGAACCCTTCCGCGGTCCCGACGCCTGCGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS TCA 90 bp GCCCTCCACGCAAGGGCGAGAAGAGCAGTTGGTCGGCACAGCTTCTaGGTTGCAGGAAGGCGGGCAGGCAGGGCTGCAAGGATCATAGCA +
Preference number: 5 (lower is better)
Translates to: ALHARARRAVGRHSF*VAGRRAGRAARIIA
Trigger: TGCTATGATCCTTGCAGCCCTGCCTGCCCGCCTTCCTGCAACTCAGAAGCTGTGCCGACCAACTGCTCTTCTCGCCCTTGCGTGGAGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS TCA 90 bp CGCTCACCACTAGGGCATCCTGTTGTGTCCCTGCAGGTCACCTTCTaGGTGGCTCCATCACAGGTGCAGCGGCGGCGGCATCGGTCATCA +
Preference number: 5 (lower is better)
Translates to: RSPLGHPVVSLQVTF*VAPSQVQRRRHRSS
Trigger: TGATGACCGATGCCGCCGCCGCTGCACCTGTGATGGAGCCACTCAGAAGGTGACCTGCAGGGACACAACAGGATGCCCTAGTGGTGAGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS GCA 90 bp AGGACACTGGAGAGGGCAGACGCTGTCTGTCCTCCAGGGCTTCACTaGTGCCCCAGCTGCCTGACAGGCTGCAGTATAAGCAGCCAGGCT +
Preference number: 5 (lower is better)
Translates to: RTLERADAVCPPGLH*CPSCLTGCSISSQA
Trigger: AGCCTGGCTGCTTATACTGCAGCCTGTCAGGCAGCTGGGGCAGCAGTGAAGCCCTGGAGGACAGACAGCGTCTGCCCTCTCCAGTGTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS CCA 90 bp GGTAGATGCACCCACAGGATGAGACAGGCACACAATCACCACCACTaGCCACGAAGCCTGGAAGGCACACGCAGCCCTCCACGCAAGGGC +
Preference number: 5 (lower is better)
Translates to: GRCTHRMRQAHNHHH*PRSLEGTRSPPRKG
Trigger: GCCCTTGCGTGGAGGGCTGCGTGTGCCTTCCAGGCTTCGTGGCCAGTGGTGGTGATTGTGTGCCTGTCTCATCCTGTGGGTGCATCTACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS CCA 90 bp GTAGTAGTGCCCACAGCCACACACCCCAGGACTCCATTGGATGGTTaGCAGGCCTCCTGTGGGCCGCAAGATGAGGGCTCGCAGGAAACC +
Preference number: 5 (lower is better)
Translates to: VVVPTATHPRTPLDG*QASCGPQDEGSQET
Trigger: GGTTTCCTGCGAGCCCTCATCTTGCGGCCCACAGGAGGCCTGCCAACCATCCAATGGAGTCCTGGGGTGTGTGGCTGTGGGCACTACTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS CCA 90 bp TTCTCATATGCTTGTGTCTCCTCTGCCAAGCACACTGGGCAGCCTTaGGGCCCGCAGCCTTCACCACAGCCCAAGGAGGAGCCGGGAGCT +
Preference number: 5 (lower is better)
Translates to: FSYACVSSAKHTGQP*GPQPSPQPKEEPGA
Trigger: AGCTCCCGGCTCCTCCTTGGGCTGTGGTGAAGGCTGCGGGCCCCAAGGCTGCCCAGTGTGCTTGGCAGAGGAGACACAAGCATATGAGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS CCA 90 bp CCGCAGTCCTGGGCAGGAATGCACACACCGTGGGAGAGCAGGAAGTaGTCATCGCACTCACACCCTTCAAAGCAGCGGGTGGTGCAGCCA +
Preference number: 5 (lower is better)
Translates to: PQSWAGMHTPWESRK*SSHSHPSKQRVVQP
Trigger: TGGCTGCACCACCCGCTGCTTTGAAGGGTGTGAGTGCGATGACCACTTCCTGCTCTCCCACGGTGTGTGCATTCCTGCCCAGGACTGCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS CCA 90 bp ATGGAGCAGAGGCCACGGGCAGCCTGGCACTCTCGGACTCCAGCCTaGATCTCACAGACATGGCCAGATGGGCAGCCAGCTTCATGGCAT +
Preference number: 5 (lower is better)
Translates to: MEQRPRAAWHSRTPA*ISQTWPDGQPASWH
Trigger: ATGCCATGAAGCTGGCTGCCCATCTGGCCATGTCTGTGAGATCCAGGCTGGAGTCCGAGAGTGCCAGGCTGCCCGTGGCCTCTGCTCCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CAA 90 bp CACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCTTCAGTGCCAGTGGTGACGCACACTGGGCAGCCTaGGGGCCCGCAGCCTTCACC +
Preference number: 5 (lower is better)
Translates to: HCNFWEGAGLDAFSASGDAHWAA*GPAAFT
Trigger: GGTGAAGGCTGCGGGCCCCAAGGCTGCCCAGTGTGC...GTCACCACTGGCACTGAAGGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS TCA 90 bp ACACGTAGGCGACCCTCACTCAGAGAGGCAGGGAGGCGGGAGCGCTaGTTGTCGATCCGAACGAAGCCAATTTCCCCACGAACCAGCGAC +
Preference number: 5 (lower is better)
Translates to: TRRRPSLREAGRRER*LSIRTKPISPRTSD
Trigger: GTCGCTGGTTCGTGGGGAAATTGGCTTCGTTCGGATCGACAATCAGCGCTCCCGCCTCCCTGCCTCTCTGAGTGAGGGTCGCCTACGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS TCA 90 bp CAGGACTCCATTGGATGGTTGGCAGGCCTCCTGTGGGCCGCAAGATaGGGGCTCGCAGGAAACCAGGCCACCTTCCTCACAGTGGCAAAG +
Preference number: 5 (lower is better)
Translates to: QDSIGWLAGLLWAAR*GLAGNQATFLTVAK
Trigger: CTTTGCCACTGTGAGGAAGGTGGCCTGGTTTCCTGCGAGCCCTCATCTTGCGGCCCACAGGAGGCCTGCCAACCATCCAATGGAGTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS GCA 90 bp CCACGCAAGGGCGAGAAGAGCAGTTGGTCGGCACAGCTTCTGAGTTaGAGGAAGGCGGGCAGGCAGGGCTGCAAGGATCATAGCAGCTGT +
Preference number: 5 (lower is better)
Translates to: PRKGEKSSWSAQLLS*RKAGRQGCKDHSSC
Trigger: ACAGCTGCTATGATCCTTGCAGCCCTGCCTGCCCGCCTTCCTGCAACTCAGAAGCTGTGCCGACCAACTGCTCTTCTCGCCCTTGCGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS GCA 90 bp CATCGTTGGGATTCTTGTTGTAGTTGCCGCACAGGCCACAGAGGGTaGCAGCATAGGCAGCGGGCACGCGCAGGCGCACGAAACTGTCTC +
Preference number: 5 (lower is better)
Translates to: HRWDSCCSCRTGHRG*QHRQRARAGARNCL
Trigger: GAGACAGTTTCGTGCGCCTGCGCGTGCCCGCTGCCTATGCTGGCACCCTCTGTGGCCTGTGCGGCAACTACAACAAGAATCCCAACGATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS GCA 90 bp CTGAACGCCATTCTCTATCCGGCACTCCTCATAGGGCTCACAGTCTaGCCCTTCCTGGCAGGTGACCTGGCCATCAGGCCCGCACTCACA +
Preference number: 5 (lower is better)
Translates to: LNAILYPALLIGLTV*PFLAGDLAIRPALT
Trigger: TGTGAGTGCGGGCCTGATGGCCAGGTCACCTGCCAGGAAGGGGCAGACTGTGAGCCCTATGAGGAGTGCCGGATAGAGAATGGCGTTCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS GCA 90 bp AGGGCAGACGCTGTCTGTCCTCCAGGGCTTCACTGCTGCCCCAGCTaGCTGACAGGCTGCAGTATAAGCAGCCAGGCTACGGCAGAGATA +
Preference number: 5 (lower is better)
Translates to: RADAVCPPGLHCCPS*LTGCSISSQATAEI
Trigger: TATCTCTGCCGTAGCCTGGCTGCTTATACTGCAGCCTGTCAGGCAGCTGGGGCAGCAGTGAAGCCCTGGAGGACAGACAGCGTCTGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS CCA 90 bp CGAGCCAGGCCCACAACCTGGCCTGCCACGGTCACCACCACACGCTaGGGATCTCCAGCTGAGTTCTTTTCGAGCACAATGGAGAACTCC +
Preference number: 5 (lower is better)
Translates to: RARPTTWPATVTTTR*GSPAEFFSSTMENS
Trigger: GGAGTTCTCCATTGTGCTCGAAAAGAACTCAGCTGGAGATCCCCAGCGTGTGGTGGTGACCGTGGCAGGCCAGGTTGTGGGCCTGGCTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS GCA 90 bp GGGAGCTCGCCATGCGGTTCCAAAGGCCTCCACGTTGGGGGCCACTaGTCCACTAGGCAGCACAAAGTCGTCACTCCAGTTCCCATTGAA +
Preference number: 5 (lower is better)
Translates to: GSSPCGSKGLHVGGH*STRQHKVVTPVPIE
Trigger: TTCAATGGGAACTGGAGTGACGACTTTGTGCTGCCTAGTGGAGCAGTGGCCCCCAACGTGGAGGCCTTTGGAACCGCATGGCGAGCTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS CCA 90 bp TGTTCCTCAGGTGTGCAGGGTTTTGGGCAAGGCTCAGGCTCGCATTaGTCACAGCCTGGAGCTCCGCCCACTTTCCAGCCCTCAGGTTTC +
Preference number: 5 (lower is better)
Translates to: CSSGVQGFGQGSGSH*SQPGAPPTFQPSGF
Trigger: GAAACCTGAGGGCTGGAAAGTGGGCGGAGCTCCAGGCTGTGACCAATGCGAGCCTGAGCCTTGCCCAAAACCCTGCACACCTGAGGAACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS CCA 90 bp CGGGCAGCCTGGCACTCTCGGACTCCAGCCTGGATCTCACAGACATaGCCAGATGGGCAGCCAGCTTCATGGCATGTCAGACCGTTGTTT +
Preference number: 5 (lower is better)
Translates to: RAAWHSRTPAWISQT*PDGQPASWHVRPLF
Trigger: AAACAACGGTCTGACATGCCATGAAGCTGGCTGCCCATCTGGCCATGTCTGTGAGATCCAGGCTGGAGTCCGAGAGTGCCAGGCTGCCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS TCA 90 bp CACCAACCATCACATCCAGAAGCCCATCTTTTCCAAGCCACACCGTaGCCCCAGCCTTCTGGTGGACAAGCATGGAGCCGTCGGGCATCC +
Preference number: 5 (lower is better)
Translates to: HQPSHPEAHLFQATP*PQPSGGQAWSRRAS
Trigger: GGATGCCCGACGGCTCCATGCTTGTCCACCAGAAGGCTGGGGTCACGGTGTGGCTTGGAAAAGATGGGCTTCTGGATGTGATGGTTGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS GCA 90 bp GATTTTGATGCCAGCAGCTTGACAGGCAGCAGCATAGGCAGCCAGTaGCTGGCACAGTATGTCTTTGCTGCCCCCACCCAGGCAGACGTC +
Preference number: 5 (lower is better)
Translates to: DFDASSLTGSSIGSQ*LAQYVFAAPTQADV
Trigger: GACGTCTGCCTGGGTGGGGGCAGCAAAGACATACTGTGCCAGGCACTGGCTGCCTATGCTGCTGCCTGTCAAGCTGCTGGCATCAAAATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS CCA 90 bp CACATAGTGCGGGTCTCCAGATGCCTGGCAGCTGGCGAAATTGTCTaGGTAGCAACCCAGGAGGCCATTCTGCACATTGCAGCGCTCACC +
Preference number: 5 (lower is better)
Translates to: HIVRVSRCLAAGEIV*VATQEAILHIAALT
Trigger: GGTGAGCGCTGCAATGTGCAGAATGGCCTCCTGGGTTGCTACCCAGACAATTTCGCCAGCTGCCAGGCATCTGGAGACCCGCACTATGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS CCA 90 bp CCGTTATGGACACAGCCGCAGTCCTGGGCAGGAATGCACACACCGTaGGAGAGCAGGAAGTGGTCATCGCACTCACACCCTTCAAAGCAG +
Preference number: 5 (lower is better)
Translates to: PLWTQPQSWAGMHTP*ESRKWSSHSHPSKQ
Trigger: CTGCTTTGAAGGGTGTGAGTGCGATGACCACTTCCTGCTCTCCCACGGTGTGTGCATTCCTGCCCAGGACTGCGGCTGTGTCCATAACGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS CCA 90 bp CCAGCCTGGATCTCACAGACATGGCCAGATGGGCAGCCAGCTTCATaGCATGTCAGACCGTTGTTTGGGGAGCAGAAACAGCGCTCGCTG +
Preference number: 5 (lower is better)
Translates to: PAWISQTWPDGQPAS*HVRPLFGEQKQRSL
Trigger: CAGCGAGCGCTGTTTCTGCTCCCCAAACAACGGTCTGACATGCCATGAAGCTGGCTGCCCATCTGGCCATGTCTGTGAGATCCAGGCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS CCA 90 bp CTGGCACTCTCGGACTCCAGCCTGGATCTCACAGACATGGCCAGATaGGCAGCCAGCTTCATGGCATGTCAGACCGTTGTTTGGGGAGCA +
Preference number: 5 (lower is better)
Translates to: LALSDSSLDLTDMAR*AASFMACQTVVWGA
Trigger: TGCTCCCCAAACAACGGTCTGACATGCCATGAAGCTGGCTGCCCATCTGGCCATGTCTGTGAGATCCAGGCTGGAGTCCGAGAGTGCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS CCA 90 bp TCCAGAAGCCCATCTTTTCCAAGCCACACCGTGACCCCAGCCTTCTaGTGGACAAGCATGGAGCCGTCGGGCATCCTCCTCACAGACACA +
Preference number: 5 (lower is better)
Translates to: SRSPSFPSHTVTPAF*WTSMEPSGILLTDT
Trigger: TGTGTCTGTGAGGAGGATGCCCGACGGCTCCATGCTTGTCCACCAGAAGGCTGGGGTCACGGTGTGGCTTGGAAAAGATGGGCTTCTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS TCA 90 bp TTCCACCAGCACCTTAAAGGCAGGCAGCGCAGCGTTCTGGCCGCATaGGCCCACCAGCAGGTATGTGCAGGTACCCATAAAGTCAAAGCG +
Preference number: 5 (lower is better)
Translates to: FHQHLKGRQRSVLAA*AHQQVCAGTHKVKA
Trigger: CGCTTTGACTTTATGGGTACCTGCACATACCTGCTGGTGGGCTCATGCGGCCAGAACGCTGCGCTGCCTGCCTTTAAGGTGCTGGTGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS GCA 90 bp ACCAGCCCAAAGTCCATCTCTATCACACCTCGTGTTCCACTTTTGTaGACACGTAGGCGACCCTCACTCAGAGAGGCAGGGAGGCGGGAG +
Preference number: 5 (lower is better)
Translates to: TSPKSISITPRVPLL*TRRRPSLREAGRRE
Trigger: CTCCCGCCTCCCTGCCTCTCTGAGTGAGGGTCGCCTACGTGTGCACAAAAGTGGAACACGAGGTGTGATAGAGATGGACTTTGGGCTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS GCA 90 bp TGCCACAGAGACGGTCTCCCTTGTAGTGTTGGGTCTGCCCTGGGGTaGAGGAGGGACAAGAGTTGTGGCAGCCATCATCACACAGGTAGT +
Preference number: 5 (lower is better)
Translates to: CHRDGLPCSVGSALG*RRDKSCGSHHHTGS
Trigger: ACTACCTGTGTGATGATGGCTGCCACAACTCTTGTCCCTCCTGCACCCCAGGGCAGACCCAACACTACAAGGGAGACCGTCTCTGTGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS GCA 90 bp GTCAAAGCGCTTTCCATCGAAGCTCACATAGTGCGGGTCTCCAGATaGCTGGCAGCTGGCGAAATTGTCTGGGTAGCAACCCAGGAGGCC +
Preference number: 5 (lower is better)
Translates to: VKALSIEAHIVRVSR*LAAGEIVWVATQEA
Trigger: GGCCTCCTGGGTTGCTACCCAGACAATTTCGCCAGCTGCCAGGCATCTGGAGACCCGCACTATGTGAGCTTCGATGGAAAGCGCTTTGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS GCA 90 bp GCATATATTGGCCGTTATGGACACAGCCGCAGTCCTGGGCAGGAATaGACACACCGTGGGAGAGCAGGAAGTGGTCATCGCACTCACACC +
Preference number: 5 (lower is better)
Translates to: AYIGRYGHSRSPGQE*THRGRAGSGHRTHT
Trigger: GGTGTGAGTGCGATGACCACTTCCTGCTCTCCCACGGTGTGTGCATTCCTGCCCAGGACTGCGGCTGTGTCCATAACGGCCAATATATGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS CCA 90 bp GCAGAACTATGTTTCTGCCTTCGGCTGTCACACTCACGTGGCCTGTaGCCACAGGCAGGGTCACGACTTCACCATCCACAGTCACCTGTG +
Preference number: 5 (lower is better)
Translates to: AELCFCLRLSHSRGL*PQAGSRLHHPQSPV
Trigger: CACAGGTGACTGTGGATGGTGAAGTCGTGACCCTGCCTGTGGCCACAGGCCACGTGAGTGTGACAGCCGAAGGCAGAAACATAGTTCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS CCA 90 bp AGAAGCCCATCTTTTCCAAGCCACACCGTGACCCCAGCCTTCTGGTaGACAAGCATGGAGCCGTCGGGCATCCTCCTCACAGACACAGAT +
Preference number: 5 (lower is better)
Translates to: RSPSFPSHTVTPAFW*TSMEPSGILLTDTD
Trigger: ATCTGTGTCTGTGAGGAGGATGCCCGACGGCTCCATGCTTGTCCACCAGAAGGCTGGGGTCACGGTGTGGCTTGGAAAAGATGGGCTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CAA 90 bp CACACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGTGGGGGTCTAGCAGCTaGTGGCAGGCAGCCAGTGGC +
Preference number: 5 (lower is better)
Translates to: HTGHLPITVTSGREQVLMWGSSS*WQAASG
Trigger: GCCACTGGCTGCCTGCCACAAGCTGCTAGACCCCCA...CATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CAA 90 bp GGGACACACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGTCAGGCCCTCGGCATaGACCCCAGGACAGAGCGTT +
Preference number: 5 (lower is better)
Translates to: GTHRASSNHCNFWEGAGLVRPSA*TPGQSV
Trigger: AACGCTCTGTCCTGGGGTCAATGCCGAGGGCCTGAC...AAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTGTGTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CAA 90 bp ACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCTGTCCCACCCTGGAACTaGCCAGCTGCCACCCCAGGT +
Preference number: 5 (lower is better)
Translates to: TGHLPITVTSGREQVLMPVPPWN*PAATPG
Trigger: ACCTGGGGTGGCAGCTGGCAAGTTCCAGGGTGGGAC...AGGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CAA 90 bp CACACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGGTCCCACCCTGGAACTaGCCAGCTGCCACCCCAGGT +
Preference number: 5 (lower is better)
Translates to: HTGHLPITVTSGREQVLMVPPWN*PAATPG
Trigger: ACCTGGGGTGGCAGCTGGCAAGTTCCAGGGTGGGAC...CATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CAA 90 bp CACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCAGGCTCAGGCTCGCATaGGTCACAGCCTGGAGCTCC +
Preference number: 5 (lower is better)
Translates to: HRASSNHCNFWEGAGLDARLRLA*VTAWSS
Trigger: GGAGCTCCAGGCTGTGACCAATGCGAGCCTGAGCCT...GGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS TCA 90 bp CGTGTACACAGCCGCAGGAGGCCAAAGGCACACAAGACTCACCACTaGGGGCAAAGCCCTCATTACAAACACAGCCCTCTCGGCATTCTG +
Preference number: 5 (lower is better)
Translates to: RVHSRRRPKAHKTHH*GQSPHYKHSPLGIL
Trigger: CAGAATGCCGAGAGGGCTGTGTTTGTAATGAGGGCTTTGCCCTCAGTGGTGAGTCTTGTGTGCCTTTGGCCTCCTGCGGCTGTGTACACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS TCA 90 bp TCATACTCCTCCACTCGGTCCTCTGGGCATGTGGGACAGGACCCTTaGCATTCATGCCAACAAAGAGGGTCCCACCCTGGAACTTGCCAG +
Preference number: 5 (lower is better)
Translates to: SYSSTRSSGHVGQDP*HSCQQRGSHPGTCQ
Trigger: CTGGCAAGTTCCAGGGTGGGACCCTCTTTGTTGGCATGAATGTCAAGGGTCCTGTCCCACATGCCCAGAGGACCGAGTGGAGGAGTATGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS GCA 90 bp CACGATAGCATCATTGCCCTGGCGGTACACCTGAATCTTCCCACCTaGAGCCTGGAAGGGCAGGTACTGAAGGACGCCATCTATCAGCAC +
Preference number: 5 (lower is better)
Translates to: HDSIIALAVHLNLPT*SLEGQVLKDAIYQH
Trigger: GTGCTGATAGATGGCGTCCTTCAGTACCTGCCCTTCCAGGCTGCAGGTGGGAAGATTCAGGTGTACCGCCAGGGCAATGATGCTATCGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076648.8
CDS GCA 90 bp CACGATAGCATCATTGCCCTGGCGGTACACCTGAATCTTCCCACCTaGAGCCTGGAAGGGCAGGTACTGAAGGACGCCATTTACCAGCAC +
Preference number: 5 (lower is better)
Translates to: HDSIIALAVHLNLPT*SLEGQVLKDAIYQH
Trigger: GTGCTGGTAAATGGCGTCCTTCAGTACCTGCCCTTCCAGGCTGCAGGTGGGAAGATTCAGGTGTACCGCCAGGGCAATGATGCTATCGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000138392.8
CDS CCA 90 bp TCTGAGGACATCAGGGAAGAGTTCACCGGCATATATTGGCCGTTATaGACACAGCCGCAGTCCTGGGCAGGAATGCACACACCGTGGGAG +
Preference number: 5 (lower is better)
Translates to: SEDIREEFTGIYWPL*TQPQSWAGMHTPWE
Trigger: CTCCCACGGTGTGTGCATTCCTGCCCAGGACTGCGGCTGTGTCCATAACGGCCAATATATGCCGGTGAACTCTTCCCTGATGTCCTCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CAA 90 bp CACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCTTCAGTGCCAGTGGTGACTGCACACTGAATGCCTaGGCAGGATGCCTCTGCTGG +
Preference number: 5 (lower is better)
Translates to: HCNFWEGAGLDAFSASGDCTLNA*AGCLCW
Trigger: CCAGCAGAGGCATCCTGCCAAGGCATTCAGTGTGCA...GTCACCACTGGCACTGAAGGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CAA 90 bp GGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCTTCAGCCCACATAGGAGACTaGGCGGCTGCCCCGATGTTC +
Preference number: 5 (lower is better)
Translates to: GHLPITVTSGREQVLMPSAHIGD*AAAPMF
Trigger: GAACATCGGGGCAGCCGCCAAGTCTCCTATGTGGGC...TGAAGGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CAA 90 bp GGGAAGGGACACACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGCAGGCTCAGGGTCAGTaGGCCATCCCAGTCATAGGT +
Preference number: 5 (lower is better)
Translates to: GKGHTGHLPITVTSGREQQAQGQ*AIPVIG
Trigger: ACCTATGACTGGGATGGCCAACTGACCCTGAGCCTG...CTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTGTGTCCCTTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CAA 90 bp GGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCTTCAGCACAGCCCGCACACTaGGTCTTGGAAGCGCTTGGG +
Preference number: 5 (lower is better)
Translates to: GHLPITVTSGREQVLMPSAQPAH*VLEALG
Trigger: CCCAAGCGCTTCCAAGACCAAGTGTGCGGGCTGTGC...TGAAGGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CAA 90 bp ACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCTGCACAGCCCGCACACTaGGTCTTGGAAGCGCTTGGG +
Preference number: 5 (lower is better)
Translates to: TGHLPITVTSGREQVLMPAQPAH*VLEALG
Trigger: CCCAAGCGCTTCCAAGACCAAGTGTGCGGGCTGTGC...AGGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CAA 90 bp GGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCTTCAGGCACAGCTTCTGAGTaGCAGGAAGGCGGGCAGGCA +
Preference number: 5 (lower is better)
Translates to: GHLPITVTSGREQVLMPSGTASE*QEGGQA
Trigger: TGCCTGCCCGCCTTCCTGCAACTCAGAAGCTGTGCC...TGAAGGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CAA 90 bp CACACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGGGCACAGCTTCTGAGTaGCAGGAAGGCGGGCAGGCA +
Preference number: 5 (lower is better)
Translates to: HTGHLPITVTSGREQVLMGTASE*QEGGQA
Trigger: TGCCTGCCCGCCTTCCTGCAACTCAGAAGCTGTGCC...CATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CAA 90 bp CACACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCACCCCAGGACTCCATaGGATGGTTGGCAGGCCTCC +
Preference number: 5 (lower is better)
Translates to: HTGHLPITVTSGREQVLMHPRTP*DGWQAS
Trigger: GGAGGCCTGCCAACCATCCAATGGAGTCCTGGGGTG...CATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CAA 90 bp GGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCTTCAGTCAGGCCCTCGGCATaGACCCCAGGACAGAGCGTT +
Preference number: 5 (lower is better)
Translates to: GHLPITVTSGREQVLMPSVRPSA*TPGQSV
Trigger: AACGCTCTGTCCTGGGGTCAATGCCGAGGGCCTGAC...TGAAGGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CAA 90 bp ACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCTAGGCTCAGGCTCGCATaGGTCACAGCCTGGAGCTCC +
Preference number: 5 (lower is better)
Translates to: TGHLPITVTSGREQVLMPRLRLA*VTAWSS
Trigger: GGAGCTCCAGGCTGTGACCAATGCGAGCCTGAGCCT...AGGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CAA 90 bp CACACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCAGGTGTGCAGGGTTTaGGGCAAGGCTCAGGCTCGC +
Preference number: 5 (lower is better)
Translates to: HTGHLPITVTSGREQVLMQVCRV*GKAQAR
Trigger: GCGAGCCTGAGCCTTGCCCAAAACCCTGCACACCTG...CATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS TCA 90 bp CATAGGAGCAGGAGCCATGAAGATCATACACCCGTCCATCAAGAGTaGCATAATGGAGGCCTCCGTTGGCCAGACAGTGGCCACAGCCAG +
Preference number: 5 (lower is better)
Translates to: HRSRSHEDHTPVHQE*HNGGLRWPDSGHSQ
Trigger: CTGGCTGTGGCCACTGTCTGGCCAACGGAGGCCTCCATTATGTCACTCTTGATGGACGGGTGTATGATCTTCATGGCTCCTGCTCCTATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS TCA 90 bp AACCTGGCCTGCCACGGTCACCACCACACGCTGGGGATCTCCAGCTaGGTTCTTTTCGAGCACAATGGAGAACTCCTCATCTCCAGGTTT +
Preference number: 5 (lower is better)
Translates to: NLACHGHHHTLGISS*VLFEHNGELLISRF
Trigger: AAACCTGGAGATGAGGAGTTCTCCATTGTGCTCGAAAAGAACTCAGCTGGAGATCCCCAGCGTGTGGTGGTGACCGTGGCAGGCCAGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS GCA 90 bp GATCTTCCCACAGGCATCATTTTTCTCATATGCTTGTGTCTCCTCTaGCAAGCACACTGGGCAGCCTTGGGGCCCGCAGCCTTCACCACA +
Preference number: 5 (lower is better)
Translates to: DLPTGIIFLICLCLL*QAHWAALGPAAFTT
Trigger: TGTGGTGAAGGCTGCGGGCCCCAAGGCTGCCCAGTGTGCTTGGCAGAGGAGACACAAGCATATGAGAAAAATGATGCCTGTGGGAAGATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS CCA 90 bp TGTTCATTTTCCACCAGCACCTTAAAGGCAGGCAGCGCAGCGTTCTaGCCGCATGAGCCCACCAGCAGGTATGTGCAGGTACCCATAAAG +
Preference number: 5 (lower is better)
Translates to: CSFSTSTLKAGSAAF*PHEPTSRYVQVPIK
Trigger: CTTTATGGGTACCTGCACATACCTGCTGGTGGGCTCATGCGGCCAGAACGCTGCGCTGCCTGCCTTTAAGGTGCTGGTGGAAAATGAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS CCA 90 bp TTTGTCTGCAGAACTATGTTTCTGCCTTCGGCTGTCACACTCACGTaGCCTGTGGCCACAGGCAGGGTCACGACTTCACCATCCACAGTC +
Preference number: 5 (lower is better)
Translates to: FVCRTMFLPSAVTLT*PVATGRVTTSPSTV
Trigger: GACTGTGGATGGTGAAGTCGTGACCCTGCCTGTGGCCACAGGCCACGTGAGTGTGACAGCCGAAGGCAGAAACATAGTTCTGCAGACAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS CCA 90 bp TCGCTGCAGTCTGAGGACATCAGGGAAGAGTTCACCGGCATATATTaGCCGTTATGGACACAGCCGCAGTCCTGGGCAGGAATGCACACA +
Preference number: 5 (lower is better)
Translates to: SLQSEDIREEFTGIY*PLWTQPQSWAGMHT
Trigger: TGTGTGCATTCCTGCCCAGGACTGCGGCTGTGTCCATAACGGCCAATATATGCCGGTGAACTCTTCCCTGATGTCCTCAGACTGCAGCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CAA 90 bp GGGACACACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTCAGGCTCAGGGTCAGTaGGCCATCCCAGTCATAGGT +
Preference number: 5 (lower is better)
Translates to: GTHRASSNHCNFWEGAGLQAQGQ*AIPVIG
Trigger: ACCTATGACTGGGATGGCCAACTGACCCTGAGCCTG...AAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTGTGTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CAA 90 bp GGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCTTCATGGTCTTGGAAGCGCTaGGGCAGGCTCAGGGTCAGT +
Preference number: 5 (lower is better)
Translates to: GHLPITVTSGREQVLMPSWSWKR*GRLRVS
Trigger: ACTGACCCTGAGCCTGCCCAAGCGCTTCCAAGACCA...TGAAGGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CAA 90 bp GGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCTTCAGTCTCCCTTGTAGTGTaGGGTCTGCCCTGGGGTGCA +
Preference number: 5 (lower is better)
Translates to: GHLPITVTSGREQVLMPSVSLVV*GLPWGA
Trigger: TGCACCCCAGGGCAGACCCAACACTACAAGGGAGAC...TGAAGGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CAA 90 bp CACACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGAGTCACTGGGGTCTGTaGTCTGAGAGCCGTCGGGCT +
Preference number: 5 (lower is better)
Translates to: HTGHLPITVTSGREQVLMSHWGL*SESRRA
Trigger: AGCCCGACGGCTCTCAGACAACAGACCCCAGTGACT...CATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CAA 90 bp GGGAAGGGACACACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGTCCAGCACACAGCCCTaGAAGAAGCTTTCAGGAGGC +
Preference number: 5 (lower is better)
Translates to: GKGHTGHLPITVTSGREQSSTQP*KKLSGG
Trigger: GCCTCCTGAAAGCTTCTTCAAGGGCTGTGTGCTGGA...CTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTGTGTCCCTTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CAA 90 bp CACACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGTGGCACAGTATGTCTTaGCTGCCCCCACCCAGGCAG +
Preference number: 5 (lower is better)
Translates to: HTGHLPITVTSGREQVLMWHSMS*LPPPRQ
Trigger: CTGCCTGGGTGGGGGCAGCAAAGACATACTGTGCCA...CATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CAA 90 bp GGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCTTCATGGCACAGTATGTCTTaGCTGCCCCCACCCAGGCAG +
Preference number: 5 (lower is better)
Translates to: GHLPITVTSGREQVLMPSWHSMS*LPPPRQ
Trigger: CTGCCTGGGTGGGGGCAGCAAAGACATACTGTGCCA...TGAAGGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CAA 90 bp CACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCCCTCATCTCCAGGTTTaGGGTGACAGACGCTGGCCA +
Preference number: 5 (lower is better)
Translates to: HRASSNHCNFWEGAGLDAPHLQV*GDRRWP
Trigger: TGGCCAGCGTCTGTCACCCAAAACCTGGAGATGAGG...GGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS TCA 90 bp TATTTGCAAATTCCAAGGCATCGGGAGCCTGGTCCAAGTCAGGCGTaGGGAAGTCATCGGCAGGGTCTCCATTATAGTTGCCGCACAGCC +
Preference number: 5 (lower is better)
Translates to: YLQIPRHREPGPSQA*GSHRQGLHYSCRTA
Trigger: GGCTGTGCGGCAACTATAATGGAGACCCTGCCGATGACTTCCTCACGCCTGACTTGGACCAGGCTCCCGATGCCTTGGAATTTGCAAATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS GCA 90 bp GCCATCATCACACAGGTAGTCCCCATCATCCAGCTTCCAGCTATTTaGAAATTCCAAGGCATCGGGAGCCTGGTCCAAGTCAGGCGTGAG +
Preference number: 5 (lower is better)
Translates to: AIITQVVPIIQLPAI*KFQGIGSLVQVRRE
Trigger: CTCACGCCTGACTTGGACCAGGCTCCCGATGCCTTGGAATTTGCAAATAGCTGGAAGCTGGATGATGGGGACTACCTGTGTGATGATGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS GCA 90 bp CATGGCATGTCAGACCGTTGTTTGGGGAGCAGAAACAGCGCTCGCTaGAGTCTGAGGACATCAGGGAAGAGTTCACCGGCATATATTGGC +
Preference number: 5 (lower is better)
Translates to: HGMSDRCLGSRNSAR*SLRTSGKSSPAYIG
Trigger: GCCAATATATGCCGGTGAACTCTTCCCTGATGTCCTCAGACTGCAGCGAGCGCTGTTTCTGCTCCCCAAACAACGGTCTGACATGCCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS CCA 90 bp ACGTATGGCACCCTGGGGGTTCAGCAACTTGTGACACTCCCGGAATaGACCCTCGGGATCAGCAAGGATTCCACACTCCTTTTTGTCTTG +
Preference number: 5 (lower is better)
Translates to: TYGTLGVQQLVTLPE*TLGISKDSTLLFVL
Trigger: CAAGACAAAAAGGAGTGTGGAATCCTTGCTGATCCCGAGGGTCCATTCCGGGAGTGTCACAAGTTGCTGAACCCCCAGGGTGCCATACGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS CCA 90 bp GCACAATGGAGAACTCCTCATCTCCAGGTTTTGGGTGACAGACGCTaGCCAGGACATAGGAGCAGGAGCCATGAAGATCATACACCCGTC +
Preference number: 5 (lower is better)
Translates to: AQWRTPHLQVLGDRR*PGHRSRSHEDHTPV
Trigger: GACGGGTGTATGATCTTCATGGCTCCTGCTCCTATGTCCTGGCCAGCGTCTGTCACCCAAAACCTGGAGATGAGGAGTTCTCCATTGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS CCA 90 bp CCACAGAGACGTCCACGGAAGGAACTCGGGATGGACATGAGGATGTaGGCATCGCCATCGAAGAGAACCTTCATTCCCTTGTTTGTCTGC +
Preference number: 5 (lower is better)
Translates to: PQRRPRKELGMDMRM*ASPSKRTFIPLFVC
Trigger: GCAGACAAACAAGGGAATGAAGGTTCTCTTCGATGGCGATGCCCACATCCTCATGTCCATCCCGAGTTCCTTCCGTGGACGTCTCTGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CAA 90 bp GGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCTTCATGCACACTGAATGCCTaGGCAGGATGCCTCTGCTGG +
Preference number: 5 (lower is better)
Translates to: GHLPITVTSGREQVLMPSCTLNA*AGCLCW
Trigger: CCAGCAGAGGCATCCTGCCAAGGCATTCAGTGTGCA...TGAAGGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CAA 90 bp CACACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGAGGCCATTCTGCACATaGCAGCGCTCACCACTAGGG +
Preference number: 5 (lower is better)
Translates to: HTGHLPITVTSGREQVLMRPFCT*QRSPLG
Trigger: CCCTAGTGGTGAGCGCTGCAATGTGCAGAATGGCCT...CATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CAA 90 bp GGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCTTCAAGGCCATTCTGCACATaGCAGCGCTCACCACTAGGG +
Preference number: 5 (lower is better)
Translates to: GHLPITVTSGREQVLMPSRPFCT*QRSPLG
Trigger: CCCTAGTGGTGAGCGCTGCAATGTGCAGAATGGCCT...TGAAGGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CAA 90 bp CACACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCACACGCACAGCTCTaGTGTAGCTCACGGTCTGAC +
Preference number: 5 (lower is better)
Translates to: HTGHLPITVTSGREQVLMPHAQL*CSSRSD
Trigger: GTCAGACCGTGAGCTACACAAGAGCTGTGCGTGTGG...CATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CAA 90 bp GGGAAGGGACACACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGCCAAAGTCCAATACATaGGAAGCTTGGCCTCCACCC +
Preference number: 5 (lower is better)
Translates to: GKGHTGHLPITVTSGREQPKSNT*EAWPPP
Trigger: GGGTGGAGGCCAAGCTTCCAATGTATTGGACTTTGG...CTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTGTGTCCCTTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CAA 90 bp GGGAAGGGACACACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGTGGCACATCATGCCTTaGCCTGGTTGGCACACACAA +
Preference number: 5 (lower is better)
Translates to: GKGHTGHLPITVTSGREQWHIMP*PGWHTQ
Trigger: TTGTGTGTGCCAACCAGGCAAAGGCATGATGTGCCA...CTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTGTGTCCCTTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CAA 90 bp GGGACACACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTCACACCCTCACCACCTaGAACTTTGCAGGTCTCCTG +
Preference number: 5 (lower is better)
Translates to: GTHRASSNHCNFWEGAGLHTLTT*NFAGLL
Trigger: CAGGAGACCTGCAAAGTTCAAGGTGGTGAGGGTGTG...AAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTGTGTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CAA 90 bp ACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCTCCTCATCTCCAGGTTTaGGGTGACAGACGCTGGCCA +
Preference number: 5 (lower is better)
Translates to: TGHLPITVTSGREQVLMPPHLQV*GDRRWP
Trigger: TGGCCAGCGTCTGTCACCCAAAACCTGGAGATGAGG...AGGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CAA 90 bp CACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCTTCACCCATGCACCCTaGCTTGGGATCACAGTCACC +
Preference number: 5 (lower is better)
Translates to: HRASSNHCNFWEGAGLDAFTHAP*LGITVT
Trigger: GGTGACTGTGATCCCAAGCAAGGGTGCATGGGTGAA...GGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS GCA 90 bp GCTCGCACACCTGTCCTGGTTTGCAGCTATGATCCTGGCACATCATaGCTTTGCCTGGTTGGCACACACAATGCTGCTGGCAGTTTTCAA +
Preference number: 5 (lower is better)
Translates to: ARTPVLVCSYDPGTS*LCLVGTHNAAGSFQ
Trigger: TTGAAAACTGCCAGCAGCATTGTGTGTGCCAACCAGGCAAAGGCATGATGTGCCAGGATCATAGCTGCAAACCAGGACAGGTGTGCGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS CCA 90 bp TCATCCAGCTTCCAGCTATTTGCAAATTCCAAGGCATCGGGAGCCTaGTCCAAGTCAGGCGTGAGGAAGTCATCGGCAGGGTCTCCATTA +
Preference number: 5 (lower is better)
Translates to: SSSFQLFANSKASGA*SKSGVRKSSAGSPL
Trigger: TAATGGAGACCCTGCCGATGACTTCCTCACGCCTGACTTGGACCAGGCTCCCGATGCCTTGGAATTTGCAAATAGCTGGAAGCTGGATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS CCA 90 bp CCCTTGCTTGGGATCACAGTCACCAGGCCATCCTGGAAGAAGATGTaGACCTTGCTCACGATCTTGTCATTGTTGTGGCAAGGCTGGACA +
Preference number: 5 (lower is better)
Translates to: PLLGITVTRPSWKKM*TLLTILSLLWQGWT
Trigger: TGTCCAGCCTTGCCACAACAATGACAAGATCGTGAGCAAGGTCCACATCTTCTTCCAGGATGGCCTGGTGACTGTGATCCCAAGCAAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS CCA 90 bp CGTTGGTTTGGTCCCCATCAAAGTTTCCACAGGCCCCACACAGCATaGCTGCAAGGTCATCACCAACCATCACATCCAGAAGCCCATCTT +
Preference number: 5 (lower is better)
Translates to: RWFGPHQSFHRPHTA*LQGHHQPSHPEAHL
Trigger: AAGATGGGCTTCTGGATGTGATGGTTGGTGATGACCTTGCAGCCATGCTGTGTGGGGCCTGTGGAAACTTTGATGGGGACCAAACCAACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CAA 90 bp CACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCTTCAGTGCCAGTGGTGACCCCCGATGTTCATTTTaGGCTTCCACACTGAAGGCT +
Preference number: 5 (lower is better)
Translates to: HCNFWEGAGLDAFSASGDPRCSF*ASTLKA
Trigger: AGCCTTCAGTGTGGAAGCCAAAAATGAACATCGGGG...GTCACCACTGGCACTGAAGGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CAA 90 bp GGGACACACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTCAATACATTGGAAGCTaGGCCTCCACCCTTCAGAGC +
Preference number: 5 (lower is better)
Translates to: GTHRASSNHCNFWEGAGLQYIGS*ASTLQS
Trigger: GCTCTGAAGGGTGGAGGCCAAGCTTCCAATGTATTG...AAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTGTGTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CAA 90 bp GGGACACACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTCCAAAGTCCAATACATaGGAAGCTTGGCCTCCACCC +
Preference number: 5 (lower is better)
Translates to: GTHRASSNHCNFWEGAGLPKSNT*EAWPPP
Trigger: GGGTGGAGGCCAAGCTTCCAATGTATTGGACTTTGG...AAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTGTGTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CAA 90 bp CACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCTTCAGTGCCAGTGGTGACAGTCACCAGGTTCAGTaGCTCCACACCCAGGTATTA +
Preference number: 5 (lower is better)
Translates to: HCNFWEGAGLDAFSASGDSHQVQ*LHTQVL
Trigger: TAATACCTGGGTGTGGAGCAACTGAACCTGGTGACT...GTCACCACTGGCACTGAAGGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CAA 90 bp CACACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCACAAGGGAGTCCAATaGGGGACAGTCACCAGGTTC +
Preference number: 5 (lower is better)
Translates to: HTGHLPITVTSGREQVLMHKGVQ*GTVTRF
Trigger: GAACCTGGTGACTGTCCCCAATTGGACTCCCTTGTG...CATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CAA 90 bp ACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCTCACAAGGGAGTCCAATaGGGGACAGTCACCAGGTTC +
Preference number: 5 (lower is better)
Translates to: TGHLPITVTSGREQVLMPHKGVQ*GTVTRF
Trigger: GAACCTGGTGACTGTCCCCAATTGGACTCCCTTGTG...AGGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CAA 90 bp CACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCTTCAGTGCCAGTGGTGACGCATCCGTAGGAACATaGCTCATAGTGGCTGTTAGG +
Preference number: 5 (lower is better)
Translates to: HCNFWEGAGLDAFSASGDASVGT*LIVAVR
Trigger: CCTAACAGCCACTATGAGCAATGTTCCTACGGATGC...GTCACCACTGGCACTGAAGGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CAA 90 bp GGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCTTCACATGCCTTTGCCTGGTaGGCACACACAATGCTGCTG +
Preference number: 5 (lower is better)
Translates to: GHLPITVTSGREQVLMPSHAFAW*AHTMLL
Trigger: CAGCAGCATTGTGTGTGCCAACCAGGCAAAGGCATG...TGAAGGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CAA 90 bp CACACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCATGCCTTTGCCTGGTaGGCACACACAATGCTGCTG +
Preference number: 5 (lower is better)
Translates to: HTGHLPITVTSGREQVLMHAFAW*AHTMLL
Trigger: CAGCAGCATTGTGTGTGCCAACCAGGCAAAGGCATG...CATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CAA 90 bp GGGACACACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTTGGCACATCATGCCTTaGCCTGGTTGGCACACACAA +
Preference number: 5 (lower is better)
Translates to: GTHRASSNHCNFWEGAGLWHIMP*PGWHTQ
Trigger: TTGTGTGTGCCAACCAGGCAAAGGCATGATGTGCCA...AAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTGTGTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CAA 90 bp CACACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCACACCCTCACCACCTaGAACTTTGCAGGTCTCCTG +
Preference number: 5 (lower is better)
Translates to: HTGHLPITVTSGREQVLMHTLTT*NFAGLL
Trigger: CAGGAGACCTGCAAAGTTCAAGGTGGTGAGGGTGTG...CATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CAA 90 bp GGGACACACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTCCCCGGTTCTCATTCTaGGTTGTGACAGTGAAGGGA +
Preference number: 5 (lower is better)
Translates to: GTHRASSNHCNFWEGAGLPRFSF*VVTVKG
Trigger: TCCCTTCACTGTCACAACCAAGAATGAGAACCGGGG...AAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTGTGTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CAA 90 bp GGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCTTCATCCAGCACACAGCCCTaGAAGAAGCTTTCAGGAGGC +
Preference number: 5 (lower is better)
Translates to: GHLPITVTSGREQVLMPSSSTQP*KKLSGG
Trigger: GCCTCCTGAAAGCTTCTTCAAGGGCTGTGTGCTGGA...TGAAGGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CAA 90 bp ACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCTTTTGATGCCAGCAGCTaGACAGGCAGCAGCATAGGC +
Preference number: 5 (lower is better)
Translates to: TGHLPITVTSGREQVLMPFDASS*TGSSIG
Trigger: GCCTATGCTGCTGCCTGTCAAGCTGCTGGCATCAAA...AGGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CAA 90 bp GGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCTTCATTTGATGCCAGCAGCTaGACAGGCAGCAGCATAGGC +
Preference number: 5 (lower is better)
Translates to: GHLPITVTSGREQVLMPSFDASS*TGSSIG
Trigger: GCCTATGCTGCTGCCTGTCAAGCTGCTGGCATCAAA...TGAAGGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CAA 90 bp CACACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGTCTCCATTCTCCAAGTaGGGCCCCAGCAGCTTGACA +
Preference number: 5 (lower is better)
Translates to: HTGHLPITVTSGREQVLMSPFSK*GPSSLT
Trigger: TGTCAAGCTGCTGGGGCCCAACTTGGAGAATGGAGA...CATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CAA 90 bp ACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCTTTCACCCATGCACCCTaGCTTGGGATCACAGTCACC +
Preference number: 5 (lower is better)
Translates to: TGHLPITVTSGREQVLMPFTHAP*LGITVT
Trigger: GGTGACTGTGATCCCAAGCAAGGGTGCATGGGTGAA...AGGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS CCA 90 bp ATCTCTTCTTGCCAGCTGTTCCCAAAGTCCAATACATTGGAAGCTTaGCCTCCACCCTTCAGAGCCAGGTCGTCATCTGGGTTCCCATTG +
Preference number: 5 (lower is better)
Translates to: ISSCQLFPKSNTLEA*PPPFRARSSSGFPL
Trigger: CAATGGGAACCCAGATGACGACCTGGCTCTGAAGGGTGGAGGCCAAGCTTCCAATGTATTGGACTTTGGGAACAGCTGGCAAGAAGAGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS CCA 90 bp TTCACCCATGCACCCTTGCTTGGGATCACAGTCACCAGGCCATCCTaGAAGAAGATGTGGACCTTGCTCACGATCTTGTCATTGTTGTGG +
Preference number: 5 (lower is better)
Translates to: FTHAPLLGITVTRPS*KKMWTLLTILSLLW
Trigger: CCACAACAATGACAAGATCGTGAGCAAGGTCCACATCTTCTTCCAGGATGGCCTGGTGACTGTGATCCCAAGCAAGGGTGCATGGGTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CAA 90 bp GGGACACACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTCCAGCTTCCAGCTATTaGCAAATTCCAAGGCATCGG +
Preference number: 5 (lower is better)
Translates to: GTHRASSNHCNFWEGAGLPASSY*QIPRHR
Trigger: CCGATGCCTTGGAATTTGCAAATAGCTGGAAGCTGG...AAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTGTGTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CAA 90 bp GGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCTTCACCCCGGTTCTCATTCTaGGTTGTGACAGTGAAGGGA +
Preference number: 5 (lower is better)
Translates to: GHLPITVTSGREQVLMPSPRFSF*VVTVKG
Trigger: TCCCTTCACTGTCACAACCAAGAATGAGAACCGGGG...TGAAGGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CAA 90 bp CACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCTTCAGTGCCAGTGGTGACATGGAAATGTTGGTGTaGAGAGTGGTCACAGTGACC +
Preference number: 5 (lower is better)
Translates to: HCNFWEGAGLDAFSASGDMEMLV*RVVTVT
Trigger: GGTCACTGTGACCACTCTCAACACCAACATTTCCAT...GTCACCACTGGCACTGAAGGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CAA 90 bp GGGAAGGGACACACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGTTAGCCACGGTGACATaGAAGTATTCAGTCCCTGTG +
Preference number: 5 (lower is better)
Translates to: GKGHTGHLPITVTSGREQLATVT*KYSVPV
Trigger: CACAGGGACTGAATACTTCAATGTCACCGTGGCTAA...CTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTGTGTCCCTTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CAA 90 bp CACACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGTGGCATGTCAGACCGTaGTTTGGGGAGCAGAAACAG +
Preference number: 5 (lower is better)
Translates to: HTGHLPITVTSGREQVLMWHVRP*FGEQKQ
Trigger: CTGTTTCTGCTCCCCAAACAACGGTCTGACATGCCA...CATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS GCA 90 bp ATGTGGGCATCGCCATCGAAGAGAACCTTCATTCCCTTGTTTGTCTaGAGAACTATGTTTCTGCCTTCGGCTGTCACACTCACGTGGCCT +
Preference number: 5 (lower is better)
Translates to: MWASPSKRTFIPLFV*RTMFLPSAVTLTWP
Trigger: AGGCCACGTGAGTGTGACAGCCGAAGGCAGAAACATAGTTCTGCAGACAAACAAGGGAATGAAGGTTCTCTTCGATGGCGATGCCCACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CAA 90 bp CACACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCCCGATGTTCATTTTaGGCTTCCACACTGAAGGCT +
Preference number: 5 (lower is better)
Translates to: HTGHLPITVTSGREQVLMPRCSF*ASTLKA
Trigger: AGCCTTCAGTGTGGAAGCCAAAAATGAACATCGGGG...CATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CAA 90 bp CACACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCAGCTTCCAGCTATTaGCAAATTCCAAGGCATCGG +
Preference number: 5 (lower is better)
Translates to: HTGHLPITVTSGREQVLMPASSY*QIPRHR
Trigger: CCGATGCCTTGGAATTTGCAAATAGCTGGAAGCTGG...CATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CAA 90 bp GGGAAGGGACACACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGAGGTATTATCTCTTCTaGCCAGCTGTTCCCAAAGTC +
Preference number: 5 (lower is better)
Translates to: GKGHTGHLPITVTSGREQRYYLF*PAVPKV
Trigger: GACTTTGGGAACAGCTGGCAAGAAGAGATAATACCT...CTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTGTGTCCCTTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CAA 90 bp ACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCTAGTCACCAGGTTCAGTaGCTCCACACCCAGGTATTA +
Preference number: 5 (lower is better)
Translates to: TGHLPITVTSGREQVLMPSHQVQ*LHTQVL
Trigger: TAATACCTGGGTGTGGAGCAACTGAACCTGGTGACT...AGGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CAA 90 bp CACACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGGCATCCGTAGGAACATaGCTCATAGTGGCTGTTAGG +
Preference number: 5 (lower is better)
Translates to: HTGHLPITVTSGREQVLMASVGT*LIVAVR
Trigger: CCTAACAGCCACTATGAGCAATGTTCCTACGGATGC...CATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CAA 90 bp ACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCTACCTTGCTCACGATCTaGTCATTGTTGTGGCAAGGC +
Preference number: 5 (lower is better)
Translates to: TGHLPITVTSGREQVLMPTLLTI*SLLWQG
Trigger: GCCTTGCCACAACAATGACAAGATCGTGAGCAAGGT...AGGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CAA 90 bp GGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCTTCAACCTTGCTCACGATCTaGTCATTGTTGTGGCAAGGC +
Preference number: 5 (lower is better)
Translates to: GHLPITVTSGREQVLMPSTLLTI*SLLWQG
Trigger: GCCTTGCCACAACAATGACAAGATCGTGAGCAAGGT...TGAAGGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CAA 90 bp CACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCATATGCGTCGTTGGTTaGGTCCCCATCAAAGTTTCC +
Preference number: 5 (lower is better)
Translates to: HRASSNHCNFWEGAGLDAICVVG*VPIKVS
Trigger: GGAAACTTTGATGGGGACCAAACCAACGACGCATAT...GGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS TCA 90 bp AATGGACCCTCGGGATCAGCAAGGATTCCACACTCCTTTTTGTCTTaGATTTGCTGGGTCACAAGGGAGTCCAATTGGGGACAGTCACCA +
Preference number: 5 (lower is better)
Translates to: NGPSGSARIPHSFLS*ICWVTRESNWGQSP
Trigger: TGGTGACTGTCCCCAATTGGACTCCCTTGTGACCCAGCAAATTCAAGACAAAAAGGAGTGTGGAATCCTTGCTGATCCCGAGGGTCCATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS GCA 90 bp GTCAAAAGCCAGGGAGACCCCCGAAGCAGTGTTCACTACTACATCTaGTCCACTTATGTAAACACTGAGTTTCTGGTCCAGATGGAAGGG +
Preference number: 5 (lower is better)
Translates to: VKSQGDPRSSVHYYI*STYVNTEFLVQMEG
Trigger: CCCTTCCATCTGGACCAGAAACTCAGTGTTTACATAAGTGGAGCAGATGTAGTAGTGAACACTGCTTCGGGGGTCTCCCTGGCTTTTGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS CCA 90 bp AAGATGTGGACCTTGCTCACGATCTTGTCATTGTTGTGGCAAGGCTaGACATCAGCAAGCACTCGGTACCAGGGCACATTCTTTTGGAGT +
Preference number: 5 (lower is better)
Translates to: KMWTLLTILSLLWQG*TSASTRYQGTFFWS
Trigger: ACTCCAAAAGAATGTGCCCTGGTACCGAGTGCTTGCTGATGTCCAGCCTTGCCACAACAATGACAAGATCGTGAGCAAGGTCCACATCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CAA 90 bp GGGACACACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTAGGTATTATCTCTTCTaGCCAGCTGTTCCCAAAGTC +
Preference number: 5 (lower is better)
Translates to: GTHRASSNHCNFWEGAGLRYYLF*PAVPKV
Trigger: GACTTTGGGAACAGCTGGCAAGAAGAGATAATACCT...AAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTGTGTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CAA 90 bp CACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCCTTTTTGTCTTGAATTaGCTGGGTCACAAGGGAGTC +
Preference number: 5 (lower is better)
Translates to: HRASSNHCNFWEGAGLDALFVLN*LGHKGV
Trigger: GACTCCCTTGTGACCCAGCAAATTCAAGACAAAAAG...GGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CAA 90 bp ACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCTATGGAAATGTTGGTGTaGAGAGTGGTCACAGTGACC +
Preference number: 5 (lower is better)
Translates to: TGHLPITVTSGREQVLMPMEMLV*RVVTVT
Trigger: GGTCACTGTGACCACTCTCAACACCAACATTTCCAT...AGGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CAA 90 bp CACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCTTGTGGATGGAAATGTaGGTGTTGAGAGTGGTCACA +
Preference number: 5 (lower is better)
Translates to: HRASSNHCNFWEGAGLDALWMEM*VLRVVT
Trigger: TGTGACCACTCTCAACACCAACATTTCCATCCACAA...GGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CAA 90 bp CACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCTTCAGTGCCAGTGGTGACAGAACCTTCATTCCCTaGTTTGTCTGCAGAACTATG +
Preference number: 5 (lower is better)
Translates to: HCNFWEGAGLDAFSASGDRTFIP*FVCRTM
Trigger: CATAGTTCTGCAGACAAACAAGGGAATGAAGGTTCT...GTCACCACTGGCACTGAAGGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CAA 90 bp CACACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGATATGCGTCGTTGGTTaGGTCCCCATCAAAGTTTCC +
Preference number: 5 (lower is better)
Translates to: HTGHLPITVTSGREQVLMICVVG*VPIKVS
Trigger: GGAAACTTTGATGGGGACCAAACCAACGACGCATAT...CATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CAA 90 bp GGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCTTCACTTTTTGTCTTGAATTaGCTGGGTCACAAGGGAGTC +
Preference number: 5 (lower is better)
Translates to: GHLPITVTSGREQVLMPSLFVLN*LGHKGV
Trigger: GACTCCCTTGTGACCCAGCAAATTCAAGACAAAAAG...TGAAGGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CAA 90 bp GGGACACACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTACACTCCTTTTTGTCTaGAATTTGCTGGGTCACAAG +
Preference number: 5 (lower is better)
Translates to: GTHRASSNHCNFWEGAGLTLLFV*NLLGHK
Trigger: CTTGTGACCCAGCAAATTCAAGACAAAAAGGAGTGT...AAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTGTGTCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CAA 90 bp ACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCTTTGTGGATGGAAATGTaGGTGTTGAGAGTGGTCACA +
Preference number: 5 (lower is better)
Translates to: TGHLPITVTSGREQVLMPLWMEM*VLRVVT
Trigger: TGTGACCACTCTCAACACCAACATTTCCATCCACAA...AGGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CAA 90 bp GGGACACACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTCCTTCATTCCCTTGTTaGTCTGCAGAACTATGTTTC +
Preference number: 5 (lower is better)
Translates to: GTHRASSNHCNFWEGAGLPSFPC*SAELCF
Trigger: GAAACATAGTTCTGCAGACAAACAAGGGAATGAAGG...AAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTGTGTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CAA 90 bp GGGACACACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTAGAACCTTCATTCCCTaGTTTGTCTGCAGAACTATG +
Preference number: 5 (lower is better)
Translates to: GTHRASSNHCNFWEGAGLRTFIP*FVCRTM
Trigger: CATAGTTCTGCAGACAAACAAGGGAATGAAGGTTCT...AAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTGTGTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CAA 90 bp CACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCATTTTTCTCATATGCTaGTGTCTCCTCTGCCAAGCA +
Preference number: 5 (lower is better)
Translates to: HRASSNHCNFWEGAGLDAIFLIC*CLLCQA
Trigger: TGCTTGGCAGAGGAGACACAAGCATATGAGAAAAAT...GGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CAA 90 bp CACACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGACACTCCTTTTTGTCTaGAATTTGCTGGGTCACAAG +
Preference number: 5 (lower is better)
Translates to: HTGHLPITVTSGREQVLMTLLFV*NLLGHK
Trigger: CTTGTGACCCAGCAAATTCAAGACAAAAAGGAGTGT...CATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CAA 90 bp CACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCTTCAGTGCCAGTGGTGACGAAGACTTGGTCATTTaGATGGTTTTTGTCCATGTT +
Preference number: 5 (lower is better)
Translates to: HCNFWEGAGLDAFSASGDEDLVI*MVFVHV
Trigger: AACATGGACAAAAACCATCAAAATGACCAAGTCTTC...GTCACCACTGGCACTGAAGGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CAA 90 bp GGGACACACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGCCATTAGGGAAGACTaGGTCATTTTGATGGTTTTT +
Preference number: 5 (lower is better)
Translates to: GTHRASSNHCNFWEGAGLAIRED*VILMVF
Trigger: AAAAACCATCAAAATGACCAAGTCTTCCCTAATGGC...AAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTGTGTCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CAA 90 bp ACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCTCCTTCATTCCCTTGTTaGTCTGCAGAACTATGTTTC +
Preference number: 5 (lower is better)
Translates to: TGHLPITVTSGREQVLMPPSFPC*SAELCF
Trigger: GAAACATAGTTCTGCAGACAAACAAGGGAATGAAGG...AGGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CAA 90 bp ACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGCCTATTTTTCTCATATGCTaGTGTCTCCTCTGCCAAGCA +
Preference number: 5 (lower is better)
Translates to: TGHLPITVTSGREQVLMPIFLIC*CLLCQA
Trigger: TGCTTGGCAGAGGAGACACAAGCATATGAGAAAAAT...AGGCATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CAA 90 bp GGGACACACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGAAGACTTGGTCATTTaGATGGTTTTTGTCCATGTT +
Preference number: 5 (lower is better)
Translates to: GTHRASSNHCNFWEGAGLEDLVI*MVFVHV
Trigger: AACATGGACAAAAACCATCAAAATGACCAAGTCTTC...AAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTGTGTCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS-3UTR CAA 90 bp CACACAGGGCATCTTCCAATCACTGTAACTTCTGGGAGGGAGCAGGTCTTGATGGCCATTAGGGAAGACTaGGTCATTTTGATGGTTTTT +
Preference number: 5 (lower is better)
Translates to: HTGHLPITVTSGREQVLMAIRED*VILMVF
Trigger: AAAAACCATCAAAATGACCAAGTCTTCCCTAATGGC...CATCAAGACCTGCTCCCTCCCAGAAGTTACAGTGATTGGAAGATGCCCTGTGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS GCA 72 bp CACCTGTGGCCCTCGAGCCAGGCCCACAACCTGGCCTaGCACGGTCACCACCACACGCTGGGGATCTCCAGC +
Preference number: 6 (lower is better)
Translates to: HLWPSSQAHNLA*HGHHHTLGISS
Trigger: GCTGGAGATCCCCAGCGTGTGGTGGTGACCGTGGCAGGCCAGGTTGTGGGCCTGGCTCGAGGGCCACAGGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS GCA 72 bp TTCACCACAGCCCAAGGAGGAGCCGGGAGCTCGCCATaGGGTTCCAAAGGCCTCCACGTTGGGGGCCACTGC +
Preference number: 6 (lower is better)
Translates to: FTTAQGGAGSSP*GSKGLHVGGHC
Trigger: GCAGTGGCCCCCAACGTGGAGGCCTTTGGAACCGCATGGCGAGCTCCCGGCTCCTCCTTGGGCTGTGGTGAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS CAA 90 bp CCTGGAAGGCACACGCAGCCCTCCACGCAAGGGCGAGAAGAGCAGTaGGTCGGCACAGCTTCTGAGTTGCAGGAAGGCGGGCAGGCAGGG +
Preference number: 6 (lower is better)
Translates to: PGRHTQPSTQGREEQ*VGTASELQEGGQAG
Trigger: CCCTGCCTGCCCGCCTTCCTGCAACTCAGAAGCTGTGCCGACCAACTGCTCTTCTCGCCCTTGCGTGGAGGGCTGCGTGTGCCTTCCAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS CCA 72 bp CCCACAGCCACACACCCCAGGACTCCATTGGATGGTTaGCAGGCCTCCTGTGGGCCGCAAGATGAGGGCTCG +
Preference number: 6 (lower is better)
Translates to: PTATHPRTPLDG*QASCGPQDEGS
Trigger: CGAGCCCTCATCTTGCGGCCCACAGGAGGCCTGCCAACCATCCAATGGAGTCCTGGGGTGTGTGGCTGTGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS CCA 72 bp CTCGGTGTCACAGTCATCTCCTGTGCAGGGAGGCACTaGTGCGCAGGGGGAGTCGGGCACAGCTTCCTCCCA +
Preference number: 6 (lower is better)
Translates to: LGVTVISCAGRH*CAGGVGHSFLP
Trigger: TGGGAGGAAGCTGTGCCCGACTCCCCCTGCGCACCAGTGCCTCCCTGCACAGGAGATGACTGTGACACCGAG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS CCA 72 bp AGGCAGGGTCACGACTTCACCATCCACAGTCACCTGTaGCCCTCGAGCCAGGCCCACAACCTGGCCTGCCAC +
Preference number: 6 (lower is better)
Translates to: RQGHDFTIHSHL*PSSQAHNLACH
Trigger: GTGGCAGGCCAGGTTGTGGGCCTGGCTCGAGGGCCACAGGTGACTGTGGATGGTGAAGTCGTGACCCTGCCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS CCA 72 bp GCTTGTGTCTCCTCTGCCAAGCACACTGGGCAGCCTTaGGGCCCGCAGCCTTCACCACAGCCCAAGGAGGAG +
Preference number: 6 (lower is better)
Translates to: ACVSSAKHTGQP*GPQPSPQPKEE
Trigger: CTCCTCCTTGGGCTGTGGTGAAGGCTGCGGGCCCCAAGGCTGCCCAGTGTGCTTGGCAGAGGAGACACAAGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS CCA 72 bp AGGCCACGGGCAGCCTGGCACTCTCGGACTCCAGCCTaGATCTCACAGACATGGCCAGATGGGCAGCCAGCT +
Preference number: 6 (lower is better)
Translates to: RPRAAWHSRTPA*ISQTWPDGQPA
Trigger: AGCTGGCTGCCCATCTGGCCATGTCTGTGAGATCCAGGCTGGAGTCCGAGAGTGCCAGGCTGCCCGTGGCCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS TCA 72 bp GCAAGGGCGAGAAGAGCAGTTGGTCGGCACAGCTTCTaGGTTGCAGGAAGGCGGGCAGGCAGGGCTGCAAGG +
Preference number: 6 (lower is better)
Translates to: ARARRAVGRHSF*VAGRRAGRAAR
Trigger: CCTTGCAGCCCTGCCTGCCCGCCTTCCTGCAACTCAGAAGCTGTGCCGACCAACTGCTCTTCTCGCCCTTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS GCA 72 bp CCTCCAGGGATGCACAGTGCCCCCGGCAGCCTGGCATaGAGCAGCATAGGCTGCCAATGCATCACACAGTGG +
Preference number: 6 (lower is better)
Translates to: PPGMHSAPGSLA*SSIGCQCITQW
Trigger: CCACTGTGTGATGCATTGGCAGCCTATGCTGCTGCATGCCAGGCTGCCGGGGGCACTGTGCATCCCTGGAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS GCA 72 bp GATTCTTGTTGTAGTTGCCGCACAGGCCACAGAGGGTaGCAGCATAGGCAGCGGGCACGCGCAGGCGCACGA +
Preference number: 6 (lower is better)
Translates to: DSCCSCRTGHRG*QHRQRARAGAR
Trigger: TCGTGCGCCTGCGCGTGCCCGCTGCCTATGCTGGCACCCTCTGTGGCCTGTGCGGCAACTACAACAAGAATC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS CCA 72 bp ACACGCAGCCCTCCACGCAAGGGCGAGAAGAGCAGTTaGTCGGCACAGCTTCTGAGTTGCAGGAAGGCGGGC +
Preference number: 6 (lower is better)
Translates to: TRSPPRKGEKSS*SAQLLSCRKAG
Trigger: GCCCGCCTTCCTGCAACTCAGAAGCTGTGCCGACCAACTGCTCTTCTCGCCCTTGCGTGGAGGGCTGCGTGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS CCA 72 bp GGCATCCTGTTGTGTCCCTGCAGGTCACCTTCTGAGTaGCTCCATCACAGGTGCAGCGGCGGCGGCATCGGT +
Preference number: 6 (lower is better)
Translates to: GILLCPCRSPSE*LHHRCSGGGIG
Trigger: ACCGATGCCGCCGCCGCTGCACCTGTGATGGAGCCACTCAGAAGGTGACCTGCAGGGACACAACAGGATGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS CCA 72 bp GGAGGCCTCCGTTGGCCAGACAGTGGCCACAGCCAGTaGGATGACAGGCCTGAACGCCATTCTCTATCCGGC +
Preference number: 6 (lower is better)
Translates to: GGLRWPDSGHSQ*DDRPERHSLSG
Trigger: GCCGGATAGAGAATGGCGTTCAGGCCTGTCATCCCACTGGCTGTGGCCACTGTCTGGCCAACGGAGGCCTCC
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS CAA 72 bp CACACGCAGCCCTCCACGCAAGGGCGAGAAGAGCAGTaGGTCGGCACAGCTTCTGAGTTGCAGGAAGGCGGG +
Preference number: 6 (lower is better)
Translates to: HTQPSTQGREEQ*VGTASELQEGG
Trigger: CCCGCCTTCCTGCAACTCAGAAGCTGTGCCGACCAACTGCTCTTCTCGCCCTTGCGTGGAGGGCTGCGTGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS CAA 72 bp TGCTTGTGTCTCCTCTGCCAAGCACACTGGGCAGCCTaGGGGCCCGCAGCCTTCACCACAGCCCAAGGAGGA +
Preference number: 6 (lower is better)
Translates to: CLCLLCQAHWAA*GPAAFTTAQGG
Trigger: TCCTCCTTGGGCTGTGGTGAAGGCTGCGGGCCCCAAGGCTGCCCAGTGTGCTTGGCAGAGGAGACACAAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS CAA 90 bp AAGGAGGAGCCGGGAGCTCGCCATGCGGTTCCAAAGGCCTCCACGTaGGGGGCCACTGCTCCACTAGGCAGCACAAAGTCGTCACTCCAG +
Preference number: 6 (lower is better)
Translates to: KEEPGARHAVPKAST*GATAPLGSTKSSLQ
Trigger: CTGGAGTGACGACTTTGTGCTGCCTAGTGGAGCAGTGGCCCCCAACGTGGAGGCCTTTGGAACCGCATGGCGAGCTCCCGGCTCCTCCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS CAA 90 bp TTTCTCATATGCTTGTGTCTCCTCTGCCAAGCACACTGGGCAGCCTaGGGGCCCGCAGCCTTCACCACAGCCCAAGGAGGAGCCGGGAGC +
Preference number: 6 (lower is better)
Translates to: FLICLCLLCQAHWAA*GPAAFTTAQGGAGS
Trigger: GCTCCCGGCTCCTCCTTGGGCTGTGGTGAAGGCTGCGGGCCCCAAGGCTGCCCAGTGTGCTTGGCAGAGGAGACACAAGCATATGAGAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS TCA 72 bp CTAGGGCATCCTGTTGTGTCCCTGCAGGTCACCTTCTaGGTGGCTCCATCACAGGTGCAGCGGCGGCGGCAT +
Preference number: 6 (lower is better)
Translates to: LGHPVVSLQVTF*VAPSQVQRRRH
Trigger: ATGCCGCCGCCGCTGCACCTGTGATGGAGCCACTCAGAAGGTGACCTGCAGGGACACAACAGGATGCCCTAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS GCA 72 bp GGCCTTCCCACTCACCATCTGGCAGCGCTGCCCAGATaGACACTGAATGCCTTGGCAGGATGCCTCTGCTGG +
Preference number: 6 (lower is better)
Translates to: GLPTHHLAALPR*TLNALAGCLCW
Trigger: CCAGCAGAGGCATCCTGCCAAGGCATTCAGTGTGCATCTGGGCAGCGCTGCCAGATGGTGAGTGGGAAGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS GCA 72 bp CTTCCTGACCCGGGGCCAGCAGGCGACCCTGGTAGATaGACCCACAGGATGAGACAGGCACACAATCACCAC +
Preference number: 6 (lower is better)
Translates to: LPDPGPAGDPGR*THRMRQAHNHH
Trigger: GTGGTGATTGTGTGCCTGTCTCATCCTGTGGGTGCATCTACCAGGGTCGCCTGCTGGCCCCGGGTCAGGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS GCA 72 bp GGCCGTTATGGACACAGCCGCAGTCCTGGGCAGGAATaGACACACCGTGGGAGAGCAGGAAGTGGTCATCGC +
Preference number: 6 (lower is better)
Translates to: GRYGHSRSPGQE*THRGRAGSGHR
Trigger: GCGATGACCACTTCCTGCTCTCCCACGGTGTGTGCATTCCTGCCCAGGACTGCGGCTGTGTCCATAACGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS CCA 72 bp GCTCCAACAGAGATGGAGCAGAGGCCACGGGCAGCCTaGCACTCTCGGACTCCAGCCTGGATCTCACAGACA +
Preference number: 6 (lower is better)
Translates to: APTEMEQRPRAA*HSRTPAWISQT
Trigger: TGTCTGTGAGATCCAGGCTGGAGTCCGAGAGTGCCAGGCTGCCCGTGGCCTCTGCTCCATCTCTGTTGGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS CAA 72 bp GGGCGAGAAGAGCAGTTGGTCGGCACAGCTTCTGAGTaGCAGGAAGGCGGGCAGGCAGGGCTGCAAGGATCA +
Preference number: 6 (lower is better)
Translates to: GREEQLVGTASE*QEGGQAGLQGS
Trigger: TGATCCTTGCAGCCCTGCCTGCCCGCCTTCCTGCAACTCAGAAGCTGTGCCGACCAACTGCTCTTCTCGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS CAA 72 bp TCCTGTGGTCGGCAGGTGATACCATGGCATGGGTCTTaGGTGACGCAGGTCAGGACGCCTCCTGAGGGCTCG +
Preference number: 6 (lower is better)
Translates to: SCGRQVIPWHGS*VTQVRTPPEGS
Trigger: CGAGCCCTCAGGAGGCGTCCTGACCTGCGTCACCAAAGACCCATGCCATGGTATCACCTGCCGACCACAGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS TCA 72 bp GGCCAGCAGGCGACCCTGGTAGATGCACCCACAGGATaGGACAGGCACACAATCACCACCACTGGCCACGAA +
Preference number: 6 (lower is better)
Translates to: GQQATLVDAPTG*DRHTITTTGHE
Trigger: TTCGTGGCCAGTGGTGGTGATTGTGTGCCTGTCTCATCCTGTGGGTGCATCTACCAGGGTCGCCTGCTGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS TCA 72 bp ATTGGATGGTTGGCAGGCCTCCTGTGGGCCGCAAGATaGGGGCTCGCAGGAAACCAGGCCACCTTCCTCACA +
Preference number: 6 (lower is better)
Translates to: IGWLAGLLWAAR*GLAGNQATFLT
Trigger: TGTGAGGAAGGTGGCCTGGTTTCCTGCGAGCCCTCATCTTGCGGCCCACAGGAGGCCTGCCAACCATCCAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS GCA 72 bp GGCGAGAAGAGCAGTTGGTCGGCACAGCTTCTGAGTTaGAGGAAGGCGGGCAGGCAGGGCTGCAAGGATCAT +
Preference number: 6 (lower is better)
Translates to: GEKSSWSAQLLS*RKAGRQGCKDH
Trigger: ATGATCCTTGCAGCCCTGCCTGCCCGCCTTCCTGCAACTCAGAAGCTGTGCCGACCAACTGCTCTTCTCGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS GCA 72 bp TCACGACGTCGGACCCGTGCTGGGAGACTCGGATCTTaGCTCCATCCAGCATCACAGGCAGCTTCGTGTCCA +
Preference number: 6 (lower is better)
Translates to: SRRRTRAGRLGS*LHPASQAASCP
Trigger: TGGACACGAAGCTGCCTGTGATGCTGGATGGAGGCAAGATCCGAGTCTCCCAGCACGGGTCCGACGTCGTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS GCA 72 bp CGTCGGGACCGCGGAAGGGTTCTTGTTCCTCAGGTGTaGAGGGTTTTGGGCAAGGCTCAGGCTCGCATTGGT +
Preference number: 6 (lower is better)
Translates to: RRDRGRVLVPQV*RVLGKAQARIG
Trigger: ACCAATGCGAGCCTGAGCCTTGCCCAAAACCCTGCACACCTGAGGAACAAGAACCCTTCCGCGGTCCCGACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS GCA 72 bp ATTCTCTATCCGGCACTCCTCATAGGGCTCACAGTCTaGCCCTTCCTGGCAGGTGACCTGGCCATCAGGCCC +
Preference number: 6 (lower is better)
Translates to: ILYPALLIGLTV*PFLAGDLAIRP
Trigger: GGGCCTGATGGCCAGGTCACCTGCCAGGAAGGGGCAGACTGTGAGCCCTATGAGGAGTGCCGGATAGAGAAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS CCA 72 bp ACCCACAGGATGAGACAGGCACACAATCACCACCACTaGCCACGAAGCCTGGAAGGCACACGCAGCCCTCCA +
Preference number: 6 (lower is better)
Translates to: THRMRQAHNHHH*PRSLEGTRSPP
Trigger: TGGAGGGCTGCGTGTGCCTTCCAGGCTTCGTGGCCAGTGGTGGTGATTGTGTGCCTGTCTCATCCTGTGGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS CCA 72 bp TCCACCAGCACCTTAAAGGCAGGCAGCGCAGCGTTCTaGCCGCATGAGCCCACCAGCAGGTATGTGCAGGTA +
Preference number: 6 (lower is better)
Translates to: STSTLKAGSAAF*PHEPTSRYVQV
Trigger: TACCTGCACATACCTGCTGGTGGGCTCATGCGGCCAGAACGCTGCGCTGCCTGCCTTTAAGGTGCTGGTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS CCA 72 bp TTTTGGGCAAGGCTCAGGCTCGCATTGGTCACAGCCTaGAGCTCCGCCCACTTTCCAGCCCTCAGGTTTCCC +
Preference number: 6 (lower is better)
Translates to: FWARLRLALVTA*SSAHFPALRFP
Trigger: GGGAAACCTGAGGGCTGGAAAGTGGGCGGAGCTCCAGGCTGTGACCAATGCGAGCCTGAGCCTTGCCCAAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS CCA 72 bp ACACAGCCGCAGTCCTGGGCAGGAATGCACACACCGTaGGAGAGCAGGAAGTGGTCATCGCACTCACACCCT +
Preference number: 6 (lower is better)
Translates to: TQPQSWAGMHTP*ESRKWSSHSHP
Trigger: AGGGTGTGAGTGCGATGACCACTTCCTGCTCTCCCACGGTGTGTGCATTCCTGCCCAGGACTGCGGCTGTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS CAA 90 bp CCCGCACACTTGGTCTTGGAAGCGCTTGGGCAGGCTCAGGGTCAGTaGGCCATCCCAGTCATAGGTGACCACCAGCCCAAAGTCCATCTC +
Preference number: 6 (lower is better)
Translates to: PAHLVLEALGQAQGQ*AIPVIGDHQPKVHL
Trigger: GAGATGGACTTTGGGCTGGTGGTCACCTATGACTGGGATGGCCAACTGACCCTGAGCCTGCCCAAGCGCTTCCAAGACCAAGTGTGCGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS TCA 72 bp CAGTCACGTATGGCACCCTGGGGGTTCAGCAACTTGTaGCACTCCCGGAATGGACCCTCGGGATCAGCAAGG +
Preference number: 6 (lower is better)
Translates to: QSRMAPWGFSNL*HSRNGPSGSAR
Trigger: CCTTGCTGATCCCGAGGGTCCATTCCGGGAGTGTCACAAGTTGCTGAACCCCCAGGGTGCCATACGTGACTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS GCA 72 bp GACGGTCTCCCTTGTAGTGTTGGGTCTGCCCTGGGGTaGAGGAGGGACAAGAGTTGTGGCAGCCATCATCAC +
Preference number: 6 (lower is better)
Translates to: DGLPCSVGSALG*RRDKSCGSHHH
Trigger: GTGATGATGGCTGCCACAACTCTTGTCCCTCCTGCACCCCAGGGCAGACCCAACACTACAAGGGAGACCGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS GCA 72 bp CCATGCGGTTCCAAAGGCCTCCACGTTGGGGGCCACTaGTCCACTAGGCAGCACAAAGTCGTCACTCCAGTT +
Preference number: 6 (lower is better)
Translates to: PCGSKGLHVGGH*STRQHKVVTPV
Trigger: AACTGGAGTGACGACTTTGTGCTGCCTAGTGGAGCAGTGGCCCCCAACGTGGAGGCCTTTGGAACCGCATGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS CCA 72 bp ACAGAGACGGTCTCCCTTGTAGTGTTGGGTCTGCCCTaGGGTGCAGGAGGGACAAGAGTTGTGGCAGCCATC +
Preference number: 6 (lower is better)
Translates to: TETVSLVVLGLP*GAGGTRVVAAI
Trigger: GATGGCTGCCACAACTCTTGTCCCTCCTGCACCCCAGGGCAGACCCAACACTACAAGGGAGACCGTCTCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS CCA 72 bp CCCACAACCTGGCCTGCCACGGTCACCACCACACGCTaGGGATCTCCAGCTGAGTTCTTTTCGAGCACAATG +
Preference number: 6 (lower is better)
Translates to: PTTWPATVTTTR*GSPAEFFSSTM
Trigger: CATTGTGCTCGAAAAGAACTCAGCTGGAGATCCCCAGCGTGTGGTGGTGACCGTGGCAGGCCAGGTTGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS CCA 72 bp TGGGCAGGAATGCACACACCGTGGGAGAGCAGGAAGTaGTCATCGCACTCACACCCTTCAAAGCAGCGGGTG +
Preference number: 6 (lower is better)
Translates to: WAGMHTPWESRK*SSHSHPSKQRV
Trigger: CACCCGCTGCTTTGAAGGGTGTGAGTGCGATGACCACTTCCTGCTCTCCCACGGTGTGTGCATTCCTGCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS CCA 72 bp TCTTTTCCAAGCCACACCGTGACCCCAGCCTTCTGGTaGACAAGCATGGAGCCGTCGGGCATCCTCCTCACA +
Preference number: 6 (lower is better)
Translates to: SFPSHTVTPAFW*TSMEPSGILLT
Trigger: TGTGAGGAGGATGCCCGACGGCTCCATGCTTGTCCACCAGAAGGCTGGGGTCACGGTGTGGCTTGGAAAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS CAA 72 bp TCCATTATAGTTGCCGCACAGCCCGCACACTTGGTCTaGGAAGCGCTTGGGCAGGCTCAGGGTCAGTTGGCC +
Preference number: 6 (lower is better)
Translates to: SIIVAAQPAHLV*EALGQAQGQLA
Trigger: GGCCAACTGACCCTGAGCCTGCCCAAGCGCTTCCAAGACCAAGTGTGCGGGCTGTGCGGCAACTATAATGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS CAA 72 bp AGGGTCTCCATTATAGTTGCCGCACAGCCCGCACACTaGGTCTTGGAAGCGCTTGGGCAGGCTCAGGGTCAG +
Preference number: 6 (lower is better)
Translates to: RVSIIVAAQPAH*VLEALGQAQGQ
Trigger: CTGACCCTGAGCCTGCCCAAGCGCTTCCAAGACCAAGTGTGCGGGCTGTGCGGCAACTATAATGGAGACCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS CAA 72 bp CGCGGAAGGGTTCTTGTTCCTCAGGTGTGCAGGGTTTaGGGCAAGGCTCAGGCTCGCATTGGTCACAGCCTG +
Preference number: 6 (lower is better)
Translates to: RGRVLVPQVCRV*GKAQARIGHSL
Trigger: CAGGCTGTGACCAATGCGAGCCTGAGCCTTGCCCAAAACCCTGCACACCTGAGGAACAAGAACCCTTCCGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS CAA 90 bp TTGTTCCTCAGGTGTGCAGGGTTTTGGGCAAGGCTCAGGCTCGCATaGGTCACAGCCTGGAGCTCCGCCCACTTTCCAGCCCTCAGGTTT +
Preference number: 6 (lower is better)
Translates to: LFLRCAGFWARLRLA*VTAWSSAHFPALRF
Trigger: AAACCTGAGGGCTGGAAAGTGGGCGGAGCTCCAGGCTGTGACCAATGCGAGCCTGAGCCTTGCCCAAAACCCTGCACACCTGAGGAACAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS CAA 90 bp CATGGCCAGATGGGCAGCCAGCTTCATGGCATGTCAGACCGTTGTTaGGGGAGCAGAAACAGCGCTCGCTGCAGTCTGAGGACATCAGGG +
Preference number: 6 (lower is better)
Translates to: HGQMGSQLHGMSDRC*GSRNSARCSLRTSG
Trigger: CCCTGATGTCCTCAGACTGCAGCGAGCGCTGTTTCTGCTCCCCAAACAACGGTCTGACATGCCATGAAGCTGGCTGCCCATCTGGCCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS CAA 90 bp ACCACCAGCCCAAAGTCCATCTCTATCACACCTCGTGTTCCACTTTaGTGCACACGTAGGCGACCCTCACTCAGAGAGGCAGGGAGGCGG +
Preference number: 6 (lower is better)
Translates to: TTSPKSISITPRVPL*CTRRRPSLREAGRR
Trigger: CCGCCTCCCTGCCTCTCTGAGTGAGGGTCGCCTACGTGTGCACAAAAGTGGAACACGAGGTGTGATAGAGATGGACTTTGGGCTGGTGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS CAA 90 bp CAGACATGGCCAGATGGGCAGCCAGCTTCATGGCATGTCAGACCGTaGTTTGGGGAGCAGAAACAGCGCTCGCTGCAGTCTGAGGACATC +
Preference number: 6 (lower is better)
Translates to: QTWPDGQPASWHVRP*FGEQKQRSLQSEDI
Trigger: GATGTCCTCAGACTGCAGCGAGCGCTGTTTCTGCTCCCCAAACAACGGTCTGACATGCCATGAAGCTGGCTGCCCATCTGGCCATGTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS TCA 72 bp CACCTTAAAGGCAGGCAGCGCAGCGTTCTGGCCGCATaGGCCCACCAGCAGGTATGTGCAGGTACCCATAAA +
Preference number: 6 (lower is better)
Translates to: HLKGRQRSVLAA*AHQQVCAGTHK
Trigger: TTTATGGGTACCTGCACATACCTGCTGGTGGGCTCATGCGGCCAGAACGCTGCGCTGCCTGCCTTTAAGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS TCA 72 bp CCTGAGGGCTCGCACACCTGTCCTGGTTTGCAGCTATaGTCCTGGCACATCATGCCTTTGCCTGGTTGGCAC +
Preference number: 6 (lower is better)
Translates to: PEGSHTCPGLQL*SWHIMPLPGWH
Trigger: GTGCCAACCAGGCAAAGGCATGATGTGCCAGGATCATAGCTGCAAACCAGGACAGGTGTGCGAGCCCTCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS TCA 72 bp AGAAGCTTTCAGGAGGCACATGGGCATGGCAGCTGGTaGAAGGACTCCCTGTACCAGGAGCCAGAGGTCCAC +
Preference number: 6 (lower is better)
Translates to: RSFQEAHGHGSW*KDSLYQEPEVH
Trigger: GTGGACCTCTGGCTCCTGGTACAGGGAGTCCTTTCACCAGCTGCCATGCCCATGTGCCTCCTGAAAGCTTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS GCA 72 bp ATCATTGCCCTGGCGGTACACCTGAATCTTCCCACCTaGAGCCTGGAAGGGCAGGTACTGAAGGACGCCATC +
Preference number: 6 (lower is better)
Translates to: IIALAVHLNLPT*SLEGQVLKDAI
Trigger: GATGGCGTCCTTCAGTACCTGCCCTTCCAGGCTGCAGGTGGGAAGATTCAGGTGTACCGCCAGGGCAATGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076648.8
CDS GCA 72 bp AGGCCAAAGTCGGTTTCAATCACGACGTCGGACCCGTaGTGGGAGACTCGGATCTTGCCTCCATCCAGCATC +
Preference number: 6 (lower is better)
Translates to: RPKSVSITTSDP*WETRILPPSSI
Trigger: GATGCTGGATGGAGGCAAGATCCGAGTCTCCCAGCACGGGTCCGACGTCGTGATTGAAACCGACTTTGGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS GCA 72 bp CATTCATGCCAACAAAGAGGGTCCCACCCTGGAACTTaGCAGCTGCCACCCCAGGTAGGTATTGAGGGTGCC +
Preference number: 6 (lower is better)
Translates to: HSCQQRGSHPGT*QLPPQVGIEGA
Trigger: GGCACCCTCAATACCTACCTGGGGTGGCAGCTGGCAAGTTCCAGGGTGGGACCCTCTTTGTTGGCATGAATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS CCA 72 bp CAGGCAGCAGGCAGAGGTCATAGACACAGTCACGTATaGCACCCTGGGGGTTCAGCAACTTGTGACACTCCC +
Preference number: 6 (lower is better)
Translates to: QAAGRGHRHSHV*HPGGSATCDTP
Trigger: GGGAGTGTCACAAGTTGCTGAACCCCCAGGGTGCCATACGTGACTGTGTCTATGACCTCTGCCTGCTGCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS CCA 72 bp GGCATATATTGGCCGTTATGGACACAGCCGCAGTCCTaGGCAGGAATGCACACACCGTGGGAGAGCAGGAAG +
Preference number: 6 (lower is better)
Translates to: GIYWPLWTQPQS*AGMHTPWESRK
Trigger: CTTCCTGCTCTCCCACGGTGTGTGCATTCCTGCCCAGGACTGCGGCTGTGTCCATAACGGCCAATATATGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS CCA 72 bp TGGCACTCTCGGACTCCAGCCTGGATCTCACAGACATaGCCAGATGGGCAGCCAGCTTCATGGCATGTCAGA +
Preference number: 6 (lower is better)
Translates to: WHSRTPAWISQT*PDGQPASWHVR
Trigger: TCTGACATGCCATGAAGCTGGCTGCCCATCTGGCCATGTCTGTGAGATCCAGGCTGGAGTCCGAGAGTGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS CAA 72 bp TTGGTCTTGGAAGCGCTTGGGCAGGCTCAGGGTCAGTaGGCCATCCCAGTCATAGGTGACCACCAGCCCAAA +
Preference number: 6 (lower is better)
Translates to: LVLEALGQAQGQ*AIPVIGDHQPK
Trigger: TTTGGGCTGGTGGTCACCTATGACTGGGATGGCCAACTGACCCTGAGCCTGCCCAAGCGCTTCCAAGACCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS CAA 72 bp CCACTTCTACCCCATGGGCCACCACACGCACAGCTCTaGTGTAGCTCACGGTCTGACTGCCTCGGTGTTCAT +
Preference number: 6 (lower is better)
Translates to: PLLPHGPPHAQL*CSSRSDCLGVH
Trigger: ATGAACACCGAGGCAGTCAGACCGTGAGCTACACAAGAGCTGTGCGTGTGGTGGCCCATGGGGTAGAAGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS CAA 72 bp ATGGGCAGCCAGCTTCATGGCATGTCAGACCGTTGTTaGGGGAGCAGAAACAGCGCTCGCTGCAGTCTGAGG +
Preference number: 6 (lower is better)
Translates to: MGSQLHGMSDRC*GSRNSARCSLR
Trigger: CCTCAGACTGCAGCGAGCGCTGTTTCTGCTCCCCAAACAACGGTCTGACATGCCATGAAGCTGGCTGCCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS CAA 72 bp CCAGATGGGCAGCCAGCTTCATGGCATGTCAGACCGTaGTTTGGGGAGCAGAAACAGCGCTCGCTGCAGTCT +
Preference number: 6 (lower is better)
Translates to: PDGQPASWHVRP*FGEQKQRSLQS
Trigger: AGACTGCAGCGAGCGCTGTTTCTGCTCCCCAAACAACGGTCTGACATGCCATGAAGCTGGCTGCCCATCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS CAA 90 bp TTCGCACAGCCACTTCTACCCCATGGGCCACCACACGCACAGCTCTaGTGTAGCTCACGGTCTGACTGCCTCGGTGTTCATTTTCCACCA +
Preference number: 6 (lower is better)
Translates to: FAQPLLPHGPPHAQL*CSSRSDCLGVHFPP
Trigger: TGGTGGAAAATGAACACCGAGGCAGTCAGACCGTGAGCTACACAAGAGCTGTGCGTGTGGTGGCCCATGGGGTAGAAGTGGCTGTGCGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS CAA 90 bp CTGCACTGGCAGGTCTCCACAGGACAGTGGGCATCCGTAGGAACATaGCTCATAGTGGCTGTTAGGTGGGCAGGTCAGTGGGCAAAGTTC +
Preference number: 6 (lower is better)
Translates to: LHWQVSTGQWASVGT*LIVAVRWAGQWAKF
Trigger: GAACTTTGCCCACTGACCTGCCCACCTAACAGCCACTATGAGCAATGTTCCTACGGATGCCCACTGTCCTGTGGAGACCTGCCAGTGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS CAA 90 bp CTCATACTCCTCCACTCGGTCCTCTGGGCATGTGGGACAGGACCCTaGACATTCATGCCAACAAAGAGGGTCCCACCCTGGAACTTGCCA +
Preference number: 6 (lower is better)
Translates to: LILLHSVLWACGTGP*TFMPTKRVPPWNLP
Trigger: TGGCAAGTTCCAGGGTGGGACCCTCTTTGTTGGCATGAATGTCAAGGGTCCTGTCCCACATGCCCAGAGGACCGAGTGGAGGAGTATGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS TCA 72 bp GCAGGCTCAGGGTCAGTTGGCCATCCCAGTCATAGGTaGCCACCAGCCCAAAGTCCATCTCTATCACACCTC +
Preference number: 6 (lower is better)
Translates to: AGSGSVGHPSHR*PPAQSPSLSHL
Trigger: GAGGTGTGATAGAGATGGACTTTGGGCTGGTGGTCACCTATGACTGGGATGGCCAACTGACCCTGAGCCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS TCA 72 bp TCTCACAACCGGCCTGAGTCCTCCAGTCCTCGATTTTaGTGCCAGCAGCTTGACAGGCAGCAGCATAGGCAG +
Preference number: 6 (lower is better)
Translates to: SHNRPESSSPRF*CQQLDRQQHRQ
Trigger: CTGCCTATGCTGCTGCCTGTCAAGCTGCTGGCATCAAAATCGAGGACTGGAGGACTCAGGCCGGTTGTGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS TCA 72 bp TGGCTGTTGTCAGGGCAGGTGATCTCACAACCGGCCTaGGTCCTCCAGTCCTCGATTTTGATGCCAGCAGCT +
Preference number: 6 (lower is better)
Translates to: WLLSGQVISQPA*VLQSSILMPAA
Trigger: AGCTGCTGGCATCAAAATCGAGGACTGGAGGACTCAGGCCGGTTGTGAGATCACCTGCCCTGACAACAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS GCA 72 bp ACAGGCATCATTTTTCTCATATGCTTGTGTCTCCTCTaGCAAGCACACTGGGCAGCCTTGGGGCCCGCAGCC +
Preference number: 6 (lower is better)
Translates to: TGIIFLICLCLL*QAHWAALGPAA
Trigger: GGCTGCGGGCCCCAAGGCTGCCCAGTGTGCTTGGCAGAGGAGACACAAGCATATGAGAAAAATGATGCCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS GCA 72 bp TCAGACCGTTGTTTGGGGAGCAGAAACAGCGCTCGCTaGAGTCTGAGGACATCAGGGAAGAGTTCACCGGCA +
Preference number: 6 (lower is better)
Translates to: SDRCLGSRNSAR*SLRTSGKSSPA
Trigger: TGCCGGTGAACTCTTCCCTGATGTCCTCAGACTGCAGCGAGCGCTGTTTCTGCTCCCCAAACAACGGTCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS GCA 72 bp ATCATTGCCCTGGCGGTACACCTGAATCTTCCCACCTaGAGCCTGGAAGGGCAGGTACTGAAGGACGCCATT +
Preference number: 6 (lower is better)
Translates to: IIALAVHLNLPT*SLEGQVLKDAI
Trigger: AATGGCGTCCTTCAGTACCTGCCCTTCCAGGCTGCAGGTGGGAAGATTCAGGTGTACCGCCAGGGCAATGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000138392.8
CDS CCA 72 bp ACCCTGGGGGTTCAGCAACTTGTGACACTCCCGGAATaGACCCTCGGGATCAGCAAGGATTCCACACTCCTT +
Preference number: 6 (lower is better)
Translates to: TLGVQQLVTLPE*TLGISKDSTLL
Trigger: AAGGAGTGTGGAATCCTTGCTGATCCCGAGGGTCCATTCCGGGAGTGTCACAAGTTGCTGAACCCCCAGGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS CCA 72 bp AGAACTATGTTTCTGCCTTCGGCTGTCACACTCACGTaGCCTGTGGCCACAGGCAGGGTCACGACTTCACCA +
Preference number: 6 (lower is better)
Translates to: RTMFLPSAVTLT*PVATGRVTTSP
Trigger: TGGTGAAGTCGTGACCCTGCCTGTGGCCACAGGCCACGTGAGTGTGACAGCCGAAGGCAGAAACATAGTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS CCA 72 bp TCGGACTCCAGCCTGGATCTCACAGACATGGCCAGATaGGCAGCCAGCTTCATGGCATGTCAGACCGTTGTT +
Preference number: 6 (lower is better)
Translates to: SDSSLDLTDMAR*AASFMACQTVV
Trigger: AACAACGGTCTGACATGCCATGAAGCTGGCTGCCCATCTGGCCATGTCTGTGAGATCCAGGCTGGAGTCCGA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS CAA 90 bp GTAATGGGGATCACCCCAGGCTTGGCATTCAGTTATGCTTGTAGGTaGGCAGCCGATCTCTCCAGAGGGCAACAAGGCACACTCCTCACC +
Preference number: 6 (lower is better)
Translates to: VMGITPGLAFSYACR*AADLSRGQQGTLLT
Trigger: GGTGAGGAGTGTGCCTTGTTGCCCTCTGGAGAGATCGGCTGCCAACCTACAAGCATAACTGAATGCCAAGCCTGGGGTGATCCCCATTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS CAA 90 bp GCAAGGCTGGACATCAGCAAGCACTCGGTACCAGGGCACATTCTTTaGGAGTCCCGGGCATCGAGAAGAAAGCTCATAGACACCAGGGGA +
Preference number: 6 (lower is better)
Translates to: ARLDISKHSVPGHIL*ESRASRRKLIDTRG
Trigger: TCCCCTGGTGTCTATGAGCTTTCTTCTCGATGCCCGGGACTCCAAAAGAATGTGCCCTGGTACCGAGTGCTTGCTGATGTCCAGCCTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS TCA 72 bp GGCGGCTGCCCCGATGTTCATTTTTGGCTTCCACACTaGAGGCTGGCAGGGTCTCATCTGATCCACACAGTT +
Preference number: 6 (lower is better)
Translates to: GGCPDVHFWLPH*RLAGSHLIHTV
Trigger: AACTGTGTGGATCAGATGAGACCCTGCCAGCCTTCAGTGTGGAAGCCAAAAATGAACATCGGGGCAGCCGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS TCA 72 bp TGCCACGGTCACCACCACACGCTGGGGATCTCCAGCTaGGTTCTTTTCGAGCACAATGGAGAACTCCTCATC +
Preference number: 6 (lower is better)
Translates to: CHGHHHTLGISS*VLFEHNGELLI
Trigger: GATGAGGAGTTCTCCATTGTGCTCGAAAAGAACTCAGCTGGAGATCCCCAGCGTGTGGTGGTGACCGTGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS CCA 72 bp TTCCAGCTATTTGCAAATTCCAAGGCATCGGGAGCCTaGTCCAAGTCAGGCGTGAGGAAGTCATCGGCAGGG +
Preference number: 6 (lower is better)
Translates to: FQLFANSKASGA*SKSGVRKSSAG
Trigger: CCCTGCCGATGACTTCCTCACGCCTGACTTGGACCAGGCTCCCGATGCCTTGGAATTTGCAAATAGCTGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS CCA 72 bp TGCAAGGATCATAGCAGCTGTTGGCTGGACAGGACATaGGGCAGCTGGCTGGTAATCTCCAGTTCTCAAGGG +
Preference number: 6 (lower is better)
Translates to: CKDHSSCWLDRT*GSWLVISSSQG
Trigger: CCCTTGAGAACTGGAGATTACCAGCCAGCTGCCCCATGTCCTGTCCAGCCAACAGCTGCTATGATCCTTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS CCA 72 bp TGCCAGCTGTTCCCAAAGTCCAATACATTGGAAGCTTaGCCTCCACCCTTCAGAGCCAGGTCGTCATCTGGG +
Preference number: 6 (lower is better)
Translates to: CQLFPKSNTLEA*PPPFRARSSSG
Trigger: CCCAGATGACGACCTGGCTCTGAAGGGTGGAGGCCAAGCTTCCAATGTATTGGACTTTGGGAACAGCTGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS CCA 72 bp GCATCCGTAGGAACATTGCTCATAGTGGCTGTTAGGTaGGCAGGTCAGTGGGCAAAGTTCCTCGCTCCTCCA +
Preference number: 6 (lower is better)
Translates to: ASVGTLLIVAVR*AGQWAKFLAPP
Trigger: TGGAGGAGCGAGGAACTTTGCCCACTGACCTGCCCACCTAACAGCCACTATGAGCAATGTTCCTACGGATGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS CCA 72 bp CACACCCTCACCACCTTGAACTTTGCAGGTCTCCTGTaGTCGGCAGGTGATACCATGGCATGGGTCTTTGGT +
Preference number: 6 (lower is better)
Translates to: HTLTTLNFAGLL*SAGDTMAWVFG
Trigger: ACCAAAGACCCATGCCATGGTATCACCTGCCGACCACAGGAGACCTGCAAAGTTCAAGGTGGTGAGGGTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS CCA 72 bp CGTCCACGGAAGGAACTCGGGATGGACATGAGGATGTaGGCATCGCCATCGAAGAGAACCTTCATTCCCTTG +
Preference number: 6 (lower is better)
Translates to: RPRKELGMDMRM*ASPSKRTFIPL
Trigger: CAAGGGAATGAAGGTTCTCTTCGATGGCGATGCCCACATCCTCATGTCCATCCCGAGTTCCTTCCGTGGACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS TCA 72 bp AGGAGCCATGAAGATCATACACCCGTCCATCAAGAGTaGCATAATGGAGGCCTCCGTTGGCCAGACAGTGGC +
Preference number: 6 (lower is better)
Translates to: RSHEDHTPVHQE*HNGGLRWPDSG
Trigger: GCCACTGTCTGGCCAACGGAGGCCTCCATTATGTCACTCTTGATGGACGGGTGTATGATCTTCATGGCTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS GCA 72 bp AAGTCCATCTCTATCACACCTCGTGTTCCACTTTTGTaGACACGTAGGCGACCCTCACTCAGAGAGGCAGGG +
Preference number: 6 (lower is better)
Translates to: KSISITPRVPLL*TRRRPSLREAG
Trigger: CCCTGCCTCTCTGAGTGAGGGTCGCCTACGTGTGCACAAAAGTGGAACACGAGGTGTGATAGAGATGGACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS GCA 72 bp GTCCCGGATCTTCCCACAGGCATCATTTTTCTCATATaGTTGTGTCTCCTCTGCCAAGCACACTGGGCAGCC +
Preference number: 6 (lower is better)
Translates to: VPDLPTGIIFLI*LCLLCQAHWAA
Trigger: GGCTGCCCAGTGTGCTTGGCAGAGGAGACACAAGCATATGAGAAAAATGATGCCTGTGGGAAGATCCGGGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS CCA 72 bp TTCGAGCACAATGGAGAACTCCTCATCTCCAGGTTTTaGGTGACAGACGCTGGCCAGGACATAGGAGCAGGA +
Preference number: 6 (lower is better)
Translates to: FEHNGELLISRF*VTDAGQDIGAG
Trigger: TCCTGCTCCTATGTCCTGGCCAGCGTCTGTCACCCAAAACCTGGAGATGAGGAGTTCTCCATTGTGCTCGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS CCA 72 bp ATCAGGGAAGAGTTCACCGGCATATATTGGCCGTTATaGACACAGCCGCAGTCCTGGGCAGGAATGCACACA +
Preference number: 6 (lower is better)
Translates to: IREEFTGIYWPL*TQPQSWAGMHT
Trigger: TGTGTGCATTCCTGCCCAGGACTGCGGCTGTGTCCATAACGGCCAATATATGCCGGTGAACTCTTCCCTGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS CCA 72 bp ATCTCACAGACATGGCCAGATGGGCAGCCAGCTTCATaGCATGTCAGACCGTTGTTTGGGGAGCAGAAACAG +
Preference number: 6 (lower is better)
Translates to: ISQTWPDGQPAS*HVRPLFGEQKQ
Trigger: CTGTTTCTGCTCCCCAAACAACGGTCTGACATGCCATGAAGCTGGCTGCCCATCTGGCCATGTCTGTGAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS CCA 72 bp GCACCCTTGCTTGGGATCACAGTCACCAGGCCATCCTaGAAGAAGATGTGGACCTTGCTCACGATCTTGTCA +
Preference number: 6 (lower is better)
Translates to: APLLGITVTRPS*KKMWTLLTILS
Trigger: TGACAAGATCGTGAGCAAGGTCCACATCTTCTTCCAGGATGGCCTGGTGACTGTGATCCCAAGCAAGGGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS CCA 72 bp GGTCCCCATCAAAGTTTCCACAGGCCCCACACAGCATaGCTGCAAGGTCATCACCAACCATCACATCCAGAA +
Preference number: 6 (lower is better)
Translates to: GPHQSFHRPHTA*LQGHHQPSHPE
Trigger: TTCTGGATGTGATGGTTGGTGATGACCTTGCAGCCATGCTGTGTGGGGCCTGTGGAAACTTTGATGGGGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS CAA 72 bp GTAGGCATAGACTGTGACCAAGCCCACATAGGAGACTaGGCGGCTGCCCCGATGTTCATTTTTGGCTTCCAC +
Preference number: 6 (lower is better)
Translates to: VGIDCDQAHIGD*AAAPMFIFGFH
Trigger: GTGGAAGCCAAAAATGAACATCGGGGCAGCCGCCAAGTCTCCTATGTGGGCTTGGTCACAGTCTATGCCTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS CAA 72 bp ATCACCCCAGGCTTGGCATTCAGTTATGCTTGTAGGTaGGCAGCCGATCTCTCCAGAGGGCAACAAGGCACA +
Preference number: 6 (lower is better)
Translates to: ITPGLAFSYACR*AADLSRGQQGT
Trigger: TGTGCCTTGTTGCCCTCTGGAGAGATCGGCTGCCAACCTACAAGCATAACTGAATGCCAAGCCTGGGGTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS CAA 72 bp TTTCGAGCACAATGGAGAACTCCTCATCTCCAGGTTTaGGGTGACAGACGCTGGCCAGGACATAGGAGCAGG +
Preference number: 6 (lower is better)
Translates to: FRAQWRTPHLQV*GDRRWPGHRSR
Trigger: CCTGCTCCTATGTCCTGGCCAGCGTCTGTCACCCAAAACCTGGAGATGAGGAGTTCTCCATTGTGCTCGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS CAA 90 bp GCTGGGTCACAAGGGAGTCCAATTGGGGACAGTCACCAGGTTCAGTaGCTCCACACCCAGGTATTATCTCTTCTTGCCAGCTGTTCCCAA +
Preference number: 6 (lower is better)
Translates to: AGSQGSPIGDSHQVQ*LHTQVLSLLASCSQ
Trigger: TTGGGAACAGCTGGCAAGAAGAGATAATACCTGGGTGTGGAGCAACTGAACCTGGTGACTGTCCCCAATTGGACTCCCTTGTGACCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS CAA 90 bp CCATCCTGGAAGAAGATGTGGACCTTGCTCACGATCTTGTCATTGTaGTGGCAAGGCTGGACATCAGCAAGCACTCGGTACCAGGGCACA +
Preference number: 6 (lower is better)
Translates to: PSWKKMWTLLTILSL*WQGWTSASTRYQGT
Trigger: TGTGCCCTGGTACCGAGTGCTTGCTGATGTCCAGCCTTGCCACAACAATGACAAGATCGTGAGCAAGGTCCACATCTTCTTCCAGGATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS TCA 72 bp TCCTGTGCTCTCCACTTCTCTATCGGTGTCTTCCCCTaGGAACCATATGCGTCGTTGGTTTGGTCCCCATCA +
Preference number: 6 (lower is better)
Translates to: SCALHFSIGVFP*EPYASLVWSPS
Trigger: TGATGGGGACCAAACCAACGACGCATATGGTTCTCAGGGGAAGACACCGATAGAGAAGTGGAGAGCACAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS GCA 72 bp ACACAGGTAGTCCCCATCATCCAGCTTCCAGCTATTTaGAAATTCCAAGGCATCGGGAGCCTGGTCCAAGTC +
Preference number: 6 (lower is better)
Translates to: TQVVPIIQLPAI*KFQGIGSLVQV
Trigger: GACTTGGACCAGGCTCCCGATGCCTTGGAATTTGCAAATAGCTGGAAGCTGGATGATGGGGACTACCTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS GCA 72 bp CAGTCACCAGGCCATCCTGGAAGAAGATGTGGACCTTaGTCACGATCTTGTCATTGTTGTGGCAAGGCTGGA +
Preference number: 6 (lower is better)
Translates to: QSPGHPGRRCGP*SRSCHCCGKAG
Trigger: TCCAGCCTTGCCACAACAATGACAAGATCGTGAGCAAGGTCCACATCTTCTTCCAGGATGGCCTGGTGACTG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS CCA 72 bp CACACAGGTCAAACACACAATCATCTAGGAAAGGCTTaGGGTCCAGGAATTCATGGCAGGCAGAGAAGGGGC +
Preference number: 6 (lower is better)
Translates to: HTGQTHNHLGKA*GPGIHGRQRRG
Trigger: GCCCCTTCTCTGCCTGCCATGAATTCCTGGACCCCAAGCCTTTCCTAGATGATTGTGTGTTTGACCTGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS CCA 72 bp AGAACTCCTCATCTCCAGGTTTTGGGTGACAGACGCTaGCCAGGACATAGGAGCAGGAGCCATGAAGATCAT +
Preference number: 6 (lower is better)
Translates to: RTPHLQVLGDRR*PGHRSRSHEDH
Trigger: ATGATCTTCATGGCTCCTGCTCCTATGTCCTGGCCAGCGTCTGTCACCCAAAACCTGGAGATGAGGAGTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS CCA 72 bp ACCTTGCTCACGATCTTGTCATTGTTGTGGCAAGGCTaGACATCAGCAAGCACTCGGTACCAGGGCACATTC +
Preference number: 6 (lower is better)
Translates to: TLLTILSLLWQG*TSASTRYQGTF
Trigger: GAATGTGCCCTGGTACCGAGTGCTTGCTGATGTCCAGCCTTGCCACAACAATGACAAGATCGTGAGCAAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS CAA 72 bp CCAAAGTCCATCTCTATCACACCTCGTGTTCCACTTTaGTGCACACGTAGGCGACCCTCACTCAGAGAGGCA +
Preference number: 6 (lower is better)
Translates to: PKSISITPRVPL*CTRRRPSLREA
Trigger: TGCCTCTCTGAGTGAGGGTCGCCTACGTGTGCACAAAAGTGGAACACGAGGTGTGATAGAGATGGACTTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS CAA 72 bp CACACAGGTAGTCCCCATCATCCAGCTTCCAGCTATTaGCAAATTCCAAGGCATCGGGAGCCTGGTCCAAGT +
Preference number: 6 (lower is better)
Translates to: HTGSPHHPASSY*QIPRHREPGPS
Trigger: ACTTGGACCAGGCTCCCGATGCCTTGGAATTTGCAAATAGCTGGAAGCTGGATGATGGGGACTACCTGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS CAA 72 bp ATCTCTTCTTGCCAGCTGTTCCCAAAGTCCAATACATaGGAAGCTTGGCCTCCACCCTTCAGAGCCAGGTCG +
Preference number: 6 (lower is better)
Translates to: ISSCQLFPKSNT*EAWPPPFRARS
Trigger: CGACCTGGCTCTGAAGGGTGGAGGCCAAGCTTCCAATGTATTGGACTTTGGGAACAGCTGGCAAGAAGAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS CAA 72 bp CCGGATCTTCCCACAGGCATCATTTTTCTCATATGCTaGTGTCTCCTCTGCCAAGCACACTGGGCAGCCTTG +
Preference number: 6 (lower is better)
Translates to: PDLPTGIIFLIC*CLLCQAHWAAL
Trigger: CAAGGCTGCCCAGTGTGCTTGGCAGAGGAGACACAAGCATATGAGAAAAATGATGCCTGTGGGAAGATCCGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS CAA 72 bp GACATCAGCAAGCACTCGGTACCAGGGCACATTCTTTaGGAGTCCCGGGCATCGAGAAGAAAGCTCATAGAC +
Preference number: 6 (lower is better)
Translates to: DISKHSVPGHIL*ESRASRRKLID
Trigger: GTCTATGAGCTTTCTTCTCGATGCCCGGGACTCCAAAAGAATGTGCCCTGGTACCGAGTGCTTGCTGATGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS CAA 72 bp ACAGTCACCAGGCCATCCTGGAAGAAGATGTGGACCTaGCTCACGATCTTGTCATTGTTGTGGCAAGGCTGG +
Preference number: 6 (lower is better)
Translates to: TVTRPSWKKMWT*LTILSLLWQGW
Trigger: CCAGCCTTGCCACAACAATGACAAGATCGTGAGCAAGGTCCACATCTTCTTCCAGGATGGCCTGGTGACTGT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS CAA 90 bp CCAGGTATTATCTCTTCTTGCCAGCTGTTCCCAAAGTCCAATACATaGGAAGCTTGGCCTCCACCCTTCAGAGCCAGGTCGTCATCTGGG +
Preference number: 6 (lower is better)
Translates to: PGIISSCQLFPKSNT*EAWPPPFRARSSSG
Trigger: CCCAGATGACGACCTGGCTCTGAAGGGTGGAGGCCAAGCTTCCAATGTATTGGACTTTGGGAACAGCTGGCAAGAAGAGATAATACCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS CAA 90 bp CTGAGTTCTTTTCGAGCACAATGGAGAACTCCTCATCTCCAGGTTTaGGGTGACAGACGCTGGCCAGGACATAGGAGCAGGAGCCATGAA +
Preference number: 6 (lower is better)
Translates to: LSSFRAQWRTPHLQV*GDRRWPGHRSRSHE
Trigger: TTCATGGCTCCTGCTCCTATGTCCTGGCCAGCGTCTGTCACCCAAAACCTGGAGATGAGGAGTTCTCCATTGTGCTCGAAAAGAACTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS CAA 90 bp TATCTCTTCTTGCCAGCTGTTCCCAAAGTCCAATACATTGGAAGCTaGGCCTCCACCCTTCAGAGCCAGGTCGTCATCTGGGTTCCCATT +
Preference number: 6 (lower is better)
Translates to: YLFLPAVPKVQYIGS*ASTLQSQVVIWVPI
Trigger: AATGGGAACCCAGATGACGACCTGGCTCTGAAGGGTGGAGGCCAAGCTTCCAATGTATTGGACTTTGGGAACAGCTGGCAAGAAGAGATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS CAA 90 bp ACCCTCGGGATCAGCAAGGATTCCACACTCCTTTTTGTCTTGAATTaGCTGGGTCACAAGGGAGTCCAATTGGGGACAGTCACCAGGTTC +
Preference number: 6 (lower is better)
Translates to: TLGISKDSTLLFVLN*LGHKGVQLGTVTRF
Trigger: GAACCTGGTGACTGTCCCCAATTGGACTCCCTTGTGACCCAGCAAATTCAAGACAAAAAGGAGTGTGGAATCCTTGCTGATCCCGAGGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS CAA 90 bp GAATGGACCCTCGGGATCAGCAAGGATTCCACACTCCTTTTTGTCTaGAATTTGCTGGGTCACAAGGGAGTCCAATTGGGGACAGTCACC +
Preference number: 6 (lower is better)
Translates to: EWTLGISKDSTLLFV*NLLGHKGVQLGTVT
Trigger: GGTGACTGTCCCCAATTGGACTCCCTTGTGACCCAGCAAATTCAAGACAAAAAGGAGTGTGGAATCCTTGCTGATCCCGAGGGTCCATTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS GCA 72 bp CACATCATGCCTTTGCCTGGTTGGCACACACAATGCTaGTGGCAGTTTTCAATGAGAACTGACTCCTCTGGC +
Preference number: 6 (lower is better)
Translates to: HIMPLPGWHTQC*WQFSMRTDSSG
Trigger: GCCAGAGGAGTCAGTTCTCATTGAAAACTGCCAGCAGCATTGTGTGTGCCAACCAGGCAAAGGCATGATGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS GCA 72 bp CTGGTTTGCAGCTATGATCCTGGCACATCATGCCTTTaGCTGGTTGGCACACACAATGCTGCTGGCAGTTTT +
Preference number: 6 (lower is better)
Translates to: LVCSYDPGTSCL*LVGTHNAAGSF
Trigger: AAAACTGCCAGCAGCATTGTGTGTGCCAACCAGGCAAAGGCATGATGTGCCAGGATCATAGCTGCAAACCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS CCA 72 bp AAGATGTGGACCTTGCTCACGATCTTGTCATTGTTGTaGCAAGGCTGGACATCAGCAAGCACTCGGTACCAG +
Preference number: 6 (lower is better)
Translates to: KMWTLLTILSLL*QGWTSASTRYQ
Trigger: CTGGTACCGAGTGCTTGCTGATGTCCAGCCTTGCCACAACAATGACAAGATCGTGAGCAAGGTCCACATCTT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS CCA 72 bp GGGATCACAGTCACCAGGCCATCCTGGAAGAAGATGTaGACCTTGCTCACGATCTTGTCATTGTTGTGGCAA +
Preference number: 6 (lower is better)
Translates to: GITVTRPSWKKM*TLLTILSLLWQ
Trigger: TTGCCACAACAATGACAAGATCGTGAGCAAGGTCCACATCTTCTTCCAGGATGGCCTGGTGACTGTGATCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS CAA 72 bp TTTGTCTTGAATTTGCTGGGTCACAAGGGAGTCCAATaGGGGACAGTCACCAGGTTCAGTTGCTCCACACCC +
Preference number: 6 (lower is better)
Translates to: FVLNLLGHKGVQ*GTVTRFSCSTP
Trigger: GGGTGTGGAGCAACTGAACCTGGTGACTGTCCCCAATTGGACTCCCTTGTGACCCAGCAAATTCAAGACAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS CAA 72 bp GCAGCTATGATCCTGGCACATCATGCCTTTGCCTGGTaGGCACACACAATGCTGCTGGCAGTTTTCAATGAG +
Preference number: 6 (lower is better)
Translates to: AAMILAHHAFAW*AHTMLLAVFNE
Trigger: CTCATTGAAAACTGCCAGCAGCATTGTGTGTGCCAACCAGGCAAAGGCATGATGTGCCAGGATCATAGCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS CAA 72 bp TGGAAGAAGATGTGGACCTTGCTCACGATCTTGTCATaGTTGTGGCAAGGCTGGACATCAGCAAGCACTCGG +
Preference number: 6 (lower is better)
Translates to: WKKMWTLLTILS*LWQGWTSASTR
Trigger: CCGAGTGCTTGCTGATGTCCAGCCTTGCCACAACAATGACAAGATCGTGAGCAAGGTCCACATCTTCTTCCA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS CAA 90 bp ACAGTCACCAGGTTCAGTTGCTCCACACCCAGGTATTATCTCTTCTaGCCAGCTGTTCCCAAAGTCCAATACATTGGAAGCTTGGCCTCC +
Preference number: 6 (lower is better)
Translates to: TVTRFSCSTPRYYLF*PAVPKVQYIGSLAS
Trigger: GGAGGCCAAGCTTCCAATGTATTGGACTTTGGGAACAGCTGGCAAGAAGAGATAATACCTGGGTGTGGAGCAACTGAACCTGGTGACTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS CAA 90 bp GACATGAGGATGTGGGCATCGCCATCGAAGAGAACCTTCATTCCCTaGTTTGTCTGCAGAACTATGTTTCTGCCTTCGGCTGTCACACTC +
Preference number: 6 (lower is better)
Translates to: DMRMWASPSKRTFIP*FVCRTMFLPSAVTL
Trigger: GAGTGTGACAGCCGAAGGCAGAAACATAGTTCTGCAGACAAACAAGGGAATGAAGGTTCTCTTCGATGGCGATGCCCACATCCTCATGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS GCA 72 bp TGGCACATCATGCCTTTGCCTGGTTGGCACACACAATaGTGCTGGCAGTTTTCAATGAGAACTGACTCCTCT +
Preference number: 6 (lower is better)
Translates to: WHIMPLPGWHTQ*CWQFSMRTDSS
Trigger: AGAGGAGTCAGTTCTCATTGAAAACTGCCAGCAGCATTGTGTGTGCCAACCAGGCAAAGGCATGATGTGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS GCA 72 bp CCACTTCTCTATCGGTGTCTTCCCCTGAGAACCATATaGGTCGTTGGTTTGGTCCCCATCAAAGTTTCCACA +
Preference number: 6 (lower is better)
Translates to: PLLYRCLPLRTI*VVGLVPIKVST
Trigger: TGTGGAAACTTTGATGGGGACCAAACCAACGACGCATATGGTTCTCAGGGGAAGACACCGATAGAGAAGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS CCA 72 bp ATCATGCCTTTGCCTGGTTGGCACACACAATGCTGCTaGCAGTTTTCAATGAGAACTGACTCCTCTGGCTCA +
Preference number: 6 (lower is better)
Translates to: IMPLPGWHTQCC*QFSMRTDSSGS
Trigger: TGAGCCAGAGGAGTCAGTTCTCATTGAAAACTGCCAGCAGCATTGTGTGTGCCAACCAGGCAAAGGCATGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS CCA 72 bp TTGTCACCCTTATGGGCACACATGTCATACACACATTaGCGGAAGTATTCCAAGGGGCTCAGAACCTTGTGG +
Preference number: 6 (lower is better)
Translates to: LSPLWAHMSYTH*RKYSKGLRTLW
Trigger: CCACAAGGTTCTGAGCCCCTTGGAATACTTCCGCCAATGTGTGTATGACATGTGTGCCCATAAGGGTGACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS CAA 72 bp CTCGGGATCAGCAAGGATTCCACACTCCTTTTTGTCTaGAATTTGCTGGGTCACAAGGGAGTCCAATTGGGG +
Preference number: 6 (lower is better)
Translates to: LGISKDSTLLFV*NLLGHKGVQLG
Trigger: CCCCAATTGGACTCCCTTGTGACCCAGCAAATTCAAGACAAAAAGGAGTGTGGAATCCTTGCTGATCCCGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS CAA 72 bp GGGCATCGCCATCGAAGAGAACCTTCATTCCCTTGTTaGTCTGCAGAACTATGTTTCTGCCTTCGGCTGTCA +
Preference number: 6 (lower is better)
Translates to: GHRHRREPSFPC*SAELCFCLRLS
Trigger: TGACAGCCGAAGGCAGAAACATAGTTCTGCAGACAAACAAGGGAATGAAGGTTCTCTTCGATGGCGATGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS TCA 72 bp TCGGGATCAGCAAGGATTCCACACTCCTTTTTGTCTTaGATTTGCTGGGTCACAAGGGAGTCCAATTGGGGA +
Preference number: 6 (lower is better)
Translates to: SGSARIPHSFLS*ICWVTRESNWG
Trigger: TCCCCAATTGGACTCCCTTGTGACCCAGCAAATTCAAGACAAAAAGGAGTGTGGAATCCTTGCTGATCCCGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS CCA 72 bp TTTGCAGCTATGATCCTGGCACATCATGCCTTTGCCTaGTTGGCACACACAATGCTGCTGGCAGTTTTCAAT +
Preference number: 6 (lower is better)
Translates to: FAAMILAHHAFA*LAHTMLLAVFN
Trigger: ATTGAAAACTGCCAGCAGCATTGTGTGTGCCAACCAGGCAAAGGCATGATGTGCCAGGATCATAGCTGCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS CAA 72 bp ATGTGGGCATCGCCATCGAAGAGAACCTTCATTCCCTaGTTTGTCTGCAGAACTATGTTTCTGCCTTCGGCT +
Preference number: 6 (lower is better)
Translates to: MWASPSKRTFIP*FVCRTMFLPSA
Trigger: AGCCGAAGGCAGAAACATAGTTCTGCAGACAAACAAGGGAATGAAGGTTCTCTTCGATGGCGATGCCCACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS CAA 90 bp ACACTCCTTTTTGTCTTGAATTTGCTGGGTCACAAGGGAGTCCAATaGGGGACAGTCACCAGGTTCAGTTGCTCCACACCCAGGTATTAT +
Preference number: 6 (lower is better)
Translates to: TLLFVLNLLGHKGVQ*GTVTRFSCSTPRYY
Trigger: ATAATACCTGGGTGTGGAGCAACTGAACCTGGTGACTGTCCCCAATTGGACTCCCTTGTGACCCAGCAAATTCAAGACAAAAAGGAGTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS TCA 72 bp TGTTCACTACTACATCTGCTCCACTTATGTAAACACTaGGTTTCTGGTCCAGATGGAAGGGCAGAGCCACGA +
Preference number: 6 (lower is better)
Translates to: CSLLHLLHLCKH*VSGPDGRAEPR
Trigger: TCGTGGCTCTGCCCTTCCATCTGGACCAGAAACTCAGTGTTTACATAAGTGGAGCAGATGTAGTAGTGAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8
CDS CAA 72 bp AGGTTCAGTTGCTCCACACCCAGGTATTATCTCTTCTaGCCAGCTGTTCCCAAAGTCCAATACATTGGAAGC +
Preference number: 6 (lower is better)
Translates to: RFSCSTPRYYLF*PAVPKVQYIGS
Trigger: GCTTCCAATGTATTGGACTTTGGGAACAGCTGGCAAGAAGAGATAATACCTGGGTGTGGAGCAACTGAACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076648.8
ENSMUST00000138392.8