Pregenerated sensors for FCER2A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000005540Ensembl transcript IDs: ENSMUST00000005678.6, ENSMUST00000207463.2, ENSMUST00000207635.2, ENSMUST00000208145.2, ENSMUST00000208438.2, ENSMUST00000208492.2, ENSMUST00000208603.2
Found 110 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGAGAGAAGGGCCAGGCCTACCAGACAGAGCCAGGCTCGCCTTGCTaGAGCTGTTTAGAGTTCCTTCAATACCTCCCGCACCAGGAGCAC | + |
|
Preference number: 1 (lower is better) Translates to: GEKGQAYQTEPGSPC*SCLEFLQYLPHQEH Trigger: GTGCTCCTGGTGCGGGAGGTATTGAAGGAACTCTAAACAGCTCCAGCAAGGCGAGCCTGGCTCTGTCTGGTAGGCCTGGCCCTTCTCTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005678.6 |
||
| 3UTR TCA 90 bp | CAGCCTCCAAGGAGGGTCGGAGTGCTGGGACCACTGATGCAAACTTaGTGGGAGGACTCATCCCAGATCCTGGGGAAAGGGAACCCCTGT | + |
|
Preference number: 1 (lower is better) Translates to: QPPRRVGVLGPLMQT*WEDSSQILGKGNPC Trigger: ACAGGGGTTCCCTTTCCCCAGGATCTGGGATGAGTCCTCCCATCAAGTTTGCATCAGTGGTCCCAGCACTCCGACCCTCCTTGGAGGCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005678.6 |
||
| 3UTR TCA 90 bp | CACACCTGGTGCAGCCTCCAAGGAGGGTCGGAGTGCTGGGACCACTaGTGCAAACTTGATGGGAGGACTCATCCCAGATCCTGGGGAAAG | + |
|
Preference number: 1 (lower is better) Translates to: HTWCSLQGGSECWDH*CKLDGRTHPRSWGK Trigger: CTTTCCCCAGGATCTGGGATGAGTCCTCCCATCAAGTTTGCATCAGTGGTCCCAGCACTCCGACCCTCCTTGGAGGCTGCACCAGGTGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005678.6 |
||
| 3UTR GCA 90 bp | CTTTGTAGACCAGGCTGGCCTCGAACTCAGAAATTCGCTTGTCTCTaGCTCCCAAGTGCTGGGACTAAAGGCCTGCACCACTACGCCTGG | + |
|
Preference number: 1 (lower is better) Translates to: LCRPGWPRTQKFACL*LPSAGTKGLHHYAW Trigger: CCAGGCGTAGTGGTGCAGGCCTTTAGTCCCAGCACTTGGGAGGCAGAGACAAGCGAATTTCTGAGTTCGAGGCCAGCCTGGTCTACAAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005678.6 |
||
| 3UTR CCA 90 bp | TATGGGTGGGAACATAATCAAAGCCTTCGGTCACAGAGAGGGCCCTaGGCCCTGATAGGGGTATCCTCAGGGCCCAGCTGTTTCCACGAT | + |
|
Preference number: 1 (lower is better) Translates to: YGWEHNQSLRSQRGP*ALIGVSSGPSCFHD Trigger: ATCGTGGAAACAGCTGGGCCCTGAGGATACCCCTATCAGGGCCCAGGGCCCTCTCTGTGACCGAAGGCTTTGATTATGTTCCCACCCATA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005678.6 |
||
| 3UTR GCA 90 bp | TGGAGAGGGTTTCTGGGTAGCTGGCAGGAGCTGGCATCCACCAGCTaGTTCAGTATGGGTGGGAACATAATCAAAGCCTTCGGTCACAGA | + |
|
Preference number: 1 (lower is better) Translates to: WRGFLGSWQELASTS*FSMGGNIIKAFGHR Trigger: TCTGTGACCGAAGGCTTTGATTATGTTCCCACCCATACTGAAGCAGCTGGTGGATGCCAGCTCCTGCCAGCTACCCAGAAACCCTCTCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005678.6 |
||
| 3UTR CCA 90 bp | GGACTGCAAAAGAAGCCTTCGAAATCTTTGTTCTCAGCAGCTCCCTaGTTGGCTCAGCTGCCCACATGCATGCCCGTAGTCAGGGAGCTA | + |
|
Preference number: 1 (lower is better) Translates to: GLQKKPSKSLFSAAP*LAQLPTCMPVVREL Trigger: TAGCTCCCTGACTACGGGCATGCATGTGGGCAGCTGAGCCAACCAGGGAGCTGCTGAGAACAAAGATTTCGAAGGCTTCTTTTGCAGTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005678.6 |
||
| 3UTR GCA 90 bp | AGAAATTCGCTTGTCTCTGCCTCCCAAGTGCTGGGACTAAAGGCCTaGACCACTACGCCTGGTTGCAGGTGTAATTTTATGAAGAGAAAA | + |
|
Preference number: 1 (lower is better) Translates to: RNSLVSASQVLGLKA*TTTPGCRCNFMKRK Trigger: TTTTCTCTTCATAAAATTACACCTGCAACCAGGCGTAGTGGTGCAGGCCTTTAGTCCCAGCACTTGGGAGGCAGAGACAAGCGAATTTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005678.6 |
||
| 3UTR CAA 90 bp | GCAGCCTCCAAGGAGGGTCGGAGTGCTGGGACCACTGATGCAAACTaGATGGGAGGACTCATCCCAGATCCTGGGGAAAGGGAACCCCTG | + |
|
Preference number: 2 (lower is better) Translates to: AASKEGRSAGTTDAN*MGGLIPDPGEREPL Trigger: CAGGGGTTCCCTTTCCCCAGGATCTGGGATGAGTCCTCCCATCAAGTTTGCATCAGTGGTCCCAGCACTCCGACCCTCCTTGGAGGCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005678.6 |
||
| 3UTR-3UTR CCA 90 bp | CTGGGGCCCAGGTTTGAGGAAGGCAGATGGAATGGGATGGCCAGCTTAGCTGGAGCTGGAGAGGGTTTCTaGGTAGCTGGCAGGAGCTGG | + |
|
Preference number: 2 (lower is better) Translates to: LGPRFEEGRWNGMASLAGAGEGF*VAGRSW Trigger: CCAGCTCCTGCCAGCTACCCAGAAACCCTCTCCAGC...TCCAGCTAAGCTGGCCATCCCATTCCATCTGCCTTCCTCAAACCTGGGCCCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005678.6 |
||
| 3UTR-3UTR CCA 90 bp | CTTCGAAATCTTTGTTCTCAGCAGCTCCCTGGTTGGCTCAGCTGCCCACATGCAGATGGCCAGCTTAGCTaGAGAGCTGGAGAGGGTTTC | + |
|
Preference number: 2 (lower is better) Translates to: LRNLCSQQLPGWLSCPHADGQLS*RAGEGF Trigger: GAAACCCTCTCCAGCTCTCCAGCTAAGCTGGCCATC...TGCATGTGGGCAGCTGAGCCAACCAGGGAGCTGCTGAGAACAAAGATTTCGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005678.6 |
||
| 3UTR-3UTR CCA 90 bp | GAGCTAGCAAGGCTGGGGCCCAGGTTTGAGGAAGGCAGATGGAATGGGATGGCCCTGCTTCAGTATGGGTaGGAACATAATCAAAGCCTT | + |
|
Preference number: 2 (lower is better) Translates to: ELARLGPRFEEGRWNGMALLQYG*EHNQSL Trigger: AAGGCTTTGATTATGTTCCCACCCATACTGAAGCAG...GGCCATCCCATTCCATCTGCCTTCCTCAAACCTGGGCCCCAGCCTTGCTAGCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005678.6 |
||
| 3UTR CAA 90 bp | GAACTTGATAGGAGGTGGGGACTGCAAAAGAAGCCTTCGAAATCTTaGTTCTCAGCAGCTCCCTGGTTGGCTCAGCTGCCCACATGCATG | + |
|
Preference number: 2 (lower is better) Translates to: ELDRRWGLQKKPSKS*FSAAPWLAQLPTCM Trigger: CATGCATGTGGGCAGCTGAGCCAACCAGGGAGCTGCTGAGAACAAAGATTTCGAAGGCTTCTTTTGCAGTCCCCACCTCCTATCAAGTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005678.6 |
||
| 3UTR-3UTR CCA 90 bp | AGAGATCCTTTATTAAGCAGGGAAGAAAAGTTAAGTGGCTGCCCTCTGACTCAGGGGTTTCTGGGTAGCTaGCAGGAGCTGGCATCCACC | + |
|
Preference number: 2 (lower is better) Translates to: RDPLLSREEKLSGCPLTQGFLGS*QELAST Trigger: GGTGGATGCCAGCTCCTGCCAGCTACCCAGAAACCC...CTGAGTCAGAGGGCAGCCACTTAACTTTTCTTCCCTGCTTAATAAAGGATCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005678.6 |
||
| 3UTR-3UTR TCA 90 bp | GTTAGACTGGGCTATGATGTGATGGTGTATTTTGATTGGGCATTGCTACTTAGGGAGTGCTGGGACCACTaGTGCAAACTTGATGGGAGG | + |
|
Preference number: 2 (lower is better) Translates to: VRLGYDVMVYFDWALLLRECWDH*CKLDGR Trigger: CCTCCCATCAAGTTTGCATCAGTGGTCCCAGCACTC...CCTAAGTAGCAATGCCCAATCAAAATACACCATCACATCATAGCCCAGTCTAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005678.6 |
||
| 3UTR GCA 72 bp | TTCTCAGCAGCTCCCTGGTTGGCTCAGCTGCCCACATaGATGCCCGTAGTCAGGGAGCTAGCAAGGCTGGGG | + |
|
Preference number: 3 (lower is better) Translates to: FSAAPWLAQLPT*MPVVRELARLG Trigger: CCCCAGCCTTGCTAGCTCCCTGACTACGGGCATGCATGTGGGCAGCTGAGCCAACCAGGGAGCTGCTGAGAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005678.6 |
||
| 3UTR GCA 72 bp | TTCCTTCAATACCTCCCGCACCAGGAGCACACCTGGTaGAGCCTCCAAGGAGGGTCGGAGTGCTGGGACCAC | + |
|
Preference number: 3 (lower is better) Translates to: FLQYLPHQEHTW*SLQGGSECWDH Trigger: GTGGTCCCAGCACTCCGACCCTCCTTGGAGGCTGCACCAGGTGTGCTCCTGGTGCGGGAGGTATTGAAGGAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005678.6 |
||
| 3UTR TCA 72 bp | CGTAGTCAGGGAGCTAGCAAGGCTGGGGCCCAGGTTTaGGGAAGGCAGATGGAATGGGATGGCCAGCTTAGC | + |
|
Preference number: 3 (lower is better) Translates to: RSQGASKAGAQV*GRQMEWDGQLS Trigger: GCTAAGCTGGCCATCCCATTCCATCTGCCTTCCTCAAACCTGGGCCCCAGCCTTGCTAGCTCCCTGACTACG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005678.6 |
||
| 3UTR CCA 72 bp | GGCCAGGCCTACCAGACAGAGCCAGGCTCGCCTTGCTaGAGCTGTTTAGAGTTCCTTCAATACCTCCCGCAC | + |
|
Preference number: 3 (lower is better) Translates to: GQAYQTEPGSPC*SCLEFLQYLPH Trigger: GTGCGGGAGGTATTGAAGGAACTCTAAACAGCTCCAGCAAGGCGAGCCTGGCTCTGTCTGGTAGGCCTGGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005678.6 |
||
| 3UTR TCA 72 bp | TGCAGCCTCCAAGGAGGGTCGGAGTGCTGGGACCACTaGTGCAAACTTGATGGGAGGACTCATCCCAGATCC | + |
|
Preference number: 3 (lower is better) Translates to: CSLQGGSECWDH*CKLDGRTHPRS Trigger: GGATCTGGGATGAGTCCTCCCATCAAGTTTGCATCAGTGGTCCCAGCACTCCGACCCTCCTTGGAGGCTGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005678.6 |
||
| 3UTR GCA 72 bp | AAGGGCCAGGCCTACCAGACAGAGCCAGGCTCGCCTTaGTGGAGCTGTTTAGAGTTCCTTCAATACCTCCCG | + |
|
Preference number: 3 (lower is better) Translates to: KGQAYQTEPGSP*WSCLEFLQYLP Trigger: CGGGAGGTATTGAAGGAACTCTAAACAGCTCCAGCAAGGCGAGCCTGGCTCTGTCTGGTAGGCCTGGCCCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005678.6 |
||
| 3UTR GCA 72 bp | CCAGGCTGGCCTCGAACTCAGAAATTCGCTTGTCTCTaGCTCCCAAGTGCTGGGACTAAAGGCCTGCACCAC | + |
|
Preference number: 3 (lower is better) Translates to: PGWPRTQKFACL*LPSAGTKGLHH Trigger: GTGGTGCAGGCCTTTAGTCCCAGCACTTGGGAGGCAGAGACAAGCGAATTTCTGAGTTCGAGGCCAGCCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005678.6 |
||
| 3UTR CCA 72 bp | GAACATAATCAAAGCCTTCGGTCACAGAGAGGGCCCTaGGCCCTGATAGGGGTATCCTCAGGGCCCAGCTGT | + |
|
Preference number: 3 (lower is better) Translates to: EHNQSLRSQRGP*ALIGVSSGPSC Trigger: ACAGCTGGGCCCTGAGGATACCCCTATCAGGGCCCAGGGCCCTCTCTGTGACCGAAGGCTTTGATTATGTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005678.6 |
||
| 3UTR GCA 72 bp | TTTCTGGGTAGCTGGCAGGAGCTGGCATCCACCAGCTaGTTCAGTATGGGTGGGAACATAATCAAAGCCTTC | + |
|
Preference number: 3 (lower is better) Translates to: FLGSWQELASTS*FSMGGNIIKAF Trigger: GAAGGCTTTGATTATGTTCCCACCCATACTGAAGCAGCTGGTGGATGCCAGCTCCTGCCAGCTACCCAGAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005678.6 |
||
| 3UTR-3UTR CAA 90 bp | GTTAGACTGGGCTATGATGTGATGGTGTATTTTGATTGGGCATTGCTACTTAGGGGCTGGGGCCCAGGTTaGAGGAAGGCAGATGGAATG | + |
|
Preference number: 3 (lower is better) Translates to: VRLGYDVMVYFDWALLLRGWGPG*RKADGM Trigger: CATTCCATCTGCCTTCCTCAAACCTGGGCCCCAGCC...CCTAAGTAGCAATGCCCAATCAAAATACACCATCACATCATAGCCCAGTCTAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000005678.6 |
||
| 3UTR-3UTR CAA 90 bp | AGAGATCCTTTATTAAGCAGGGAAGAAAAGTTAAGTGGCTGCCCTCTGACTCAGACCACTGATGCAAACTaGATGGGAGGACTCATCCCA | + |
|
Preference number: 3 (lower is better) Translates to: RDPLLSREEKLSGCPLTQTTDAN*MGGLIP Trigger: TGGGATGAGTCCTCCCATCAAGTTTGCATCAGTGGT...CTGAGTCAGAGGGCAGCCACTTAACTTTTCTTCCCTGCTTAATAAAGGATCTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005678.6 |
||
| 3UTR GCA 72 bp | GATCCTTTATTAAGCAGGGAAGAAAAGTTAAGTGGCTaGCCTCTGACTCAGGCAGAAAAACAGCAGCCTGCA | + |
|
Preference number: 3 (lower is better) Translates to: DPLLSREEKLSG*PLTQAEKQQPA Trigger: TGCAGGCTGCTGTTTTTCTGCCTGAGTCAGAGGGCAGCCACTTAACTTTTCTTCCCTGCTTAATAAAGGATC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000005678.6 |
||
| CDS-3UTR GCA 90 bp | CTCTGCCTCCCAAGTGCTGGGACTAAAGGCCTGCACCACTACGCCTGGTTGCAGCAGGCCAGCCCACATTaGTGTGCTCAGCAGCCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: LCLPSAGTKGLHHYAWLQQASPH*CAQQPH Trigger: GTGGGGCTGCTGAGCACAGCAATGTGGGCTGGCCTG...CTGCAACCAGGCGTAGTGGTGCAGGCCTTTAGTCCCAGCACTTGGGAGGCAGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005678.6 |
||
| CDS-3UTR TCA 90 bp | TCAGCAGCTCCCTGGTTGGCTCAGCTGCCCACATGCATGCCCGTAGTCAGGGAGGAGAGCCGAGAGTCCTaGGCTTTCATTTGCTTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: SAAPWLAQLPTCMPVVREESRES*AFICFC Trigger: ACAGAAGCAAATGAAAGCTCAGGACTCTCGGCTCTC...CTCCCTGACTACGGGCATGCATGTGGGCAGCTGAGCCAACCAGGGAGCTGCTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005678.6 |
||
| CDS-3UTR GCA 90 bp | CTCTGCCTCCCAAGTGCTGGGACTAAAGGCCTGCACCACTACGCCTGGTTGCAGGAGAATCGGAGGCTGTaGGCTTCTCATTCAAGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: LCLPSAGTKGLHHYAWLQENRRL*ASHSSP Trigger: TGGGCTTGAATGAGAAGCGCACAGCCTCCGATTCTC...CTGCAACCAGGCGTAGTGGTGCAGGCCTTTAGTCCCAGCACTTGGGAGGCAGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005678.6 |
||
| 3UTR CAA 72 bp | GAAGGGCCAGGCCTACCAGACAGAGCCAGGCTCGCCTaGCTGGAGCTGTTTAGAGTTCCTTCAATACCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: EGPGLPDRARLA*LELFRVPSIPP Trigger: GGGAGGTATTGAAGGAACTCTAAACAGCTCCAGCAAGGCGAGCCTGGCTCTGTCTGGTAGGCCTGGCCCTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005678.6 |
||
| 3UTR CAA 72 bp | AAGGAGGGTCGGAGTGCTGGGACCACTGATGCAAACTaGATGGGAGGACTCATCCCAGATCCTGGGGAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: KEGRSAGTTDAN*MGGLIPDPGER Trigger: CCTTTCCCCAGGATCTGGGATGAGTCCTCCCATCAAGTTTGCATCAGTGGTCCCAGCACTCCGACCCTCCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005678.6 |
||
| CDS-3UTR GCA 90 bp | ATGCCCGTAGTCAGGGAGCTAGCAAGGCTGGGGCCCAGGTTTGAGGAAGGCAGACTCTATCCACAGCTTTaGCACCTCTTCCTGGAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: MPVVRELARLGPRFEEGRLYPQL*HLFLEF Trigger: AAACTCCAGGAAGAGGTGGCAAAGCTGTGGATAGAG...TCTGCCTTCCTCAAACCTGGGCCCCAGCCTTGCTAGCTCCCTGACTACGGGCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005678.6 |
||
| CDS-3UTR CCA 90 bp | TCAGCAGCTCCCTGGTTGGCTCAGCTGCCCACATGCATGCCCGTAGTCAGGGAGCACTTCTGTTGGAAATaGAGCCAGTTCTTGGGACAT | + |
|
Preference number: 4 (lower is better) Translates to: SAAPWLAQLPTCMPVVREHFCWK*SQFLGH Trigger: ATGTCCCAAGAACTGGCTCCATTTCCAACAGAAGTG...CTCCCTGACTACGGGCATGCATGTGGGCAGCTGAGCCAACCAGGGAGCTGCTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005678.6 |
||
| CDS-3UTR CCA 90 bp | CTACCAGACAGAGCCAGGCTCGCCTTGCTGGAGCTGTTTAGAGTTCCTTCAATAAAGGCGTCGTTCCACTaGCCGGATCCCCGCATCATC | + |
|
Preference number: 4 (lower is better) Translates to: LPDRARLALLELFRVPSIKASFH*PDPRII Trigger: GATGATGCGGGGATCCGGCCAGTGGAACGACGCCTT...TATTGAAGGAACTCTAAACAGCTCCAGCAAGGCGAGCCTGGCTCTGTCTGGTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005678.6 |
||
| CDS-3UTR GCA 90 bp | TTTGTAGACCAGGCTGGCCTCGAACTCAGAAATTCGCTTGTCTCTGCCTCCCAACAGCCCACATTGCTGTaGTCAGCAGCCCCACCAACA | + |
|
Preference number: 4 (lower is better) Translates to: FVDQAGLELRNSLVSASQQPTLL*SAAPPT Trigger: TGTTGGTGGGGCTGCTGAGCACAGCAATGTGGGCTG...TTGGGAGGCAGAGACAAGCGAATTTCTGAGTTCGAGGCCAGCCTGGTCTACAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005678.6 |
||
| CDS-3UTR GCA 90 bp | CTCTGCCTCCCAAGTGCTGGGACTAAAGGCCTGCACCACTACGCCTGGTTGCAGACTGCTTGGAGCCCTTaGCAAAATAGTAGCACTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LCLPSAGTKGLHHYAWLQTAWSP*QNSSTS Trigger: AGAAGTGCTACTATTTTGGCAAGGGCTCCAAGCAGT...CTGCAACCAGGCGTAGTGGTGCAGGCCTTTAGTCCCAGCACTTGGGAGGCAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005678.6 |
||
| CDS-3UTR GCA 90 bp | CTACCAGACAGAGCCAGGCTCGCCTTGCTGGAGCTGTTTAGAGTTCCTTCAATATTCTCCGTTTCCCAGTaGCACAGAAGAAGCAGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: LPDRARLALLELFRVPSIFSVSQ*HRRSRA Trigger: GGCCCTGCTTCTTCTGTGGCACTGGGAAACGGAGAA...TATTGAAGGAACTCTAAACAGCTCCAGCAAGGCGAGCCTGGCTCTGTCTGGTAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005678.6 |
||
| CDS-3UTR CCA 90 bp | CTGGGGCCCAGGTTTGAGGAAGGCAGATGGAATGGGATGGCCAGCTTAGCTGGAAAGTCCTGTTCCTTTTaGCTGTGGATGCTGACTAGT | + |
|
Preference number: 4 (lower is better) Translates to: LGPRFEEGRWNGMASLAGKSCSF*LWMLTS Trigger: ACTAGTCAGCATCCACAGCCAAAAGGAACAGGACTT...TCCAGCTAAGCTGGCCATCCCATTCCATCTGCCTTCCTCAAACCTGGGCCCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005678.6 |
||
| CDS-3UTR CCA 90 bp | TGGAGCTGTTTAGAGTTCCTTCAATACCTCCCGCACCAGGAGCACACCTGGTGCTCAGGGTTCACTTTTTaGGGTGGGCCTTGTTGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: WSCLEFLQYLPHQEHTWCSGFTF*GGPCWS Trigger: ACTCCAACAAGGCCCACCCCAAAAAGTGAACCCTGA...GCACCAGGTGTGCTCCTGGTGCGGGAGGTATTGAAGGAACTCTAAACAGCTCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005678.6 |
||
| CDS-3UTR TCA 90 bp | CTGCTTCAGTATGGGTGGGAACATAATCAAAGCCTTCGGTCACAGAGAGGGCCCGTTCTGGGAGAGTTTTaGGTTCTGGGATTGGGCGTT | + |
|
Preference number: 4 (lower is better) Translates to: LLQYGWEHNQSLRSQRGPVLGEF*VLGLGV Trigger: AACGCCCAATCCCAGAACTCAAAACTCTCCCAGAAC...GGGCCCTCTCTGTGACCGAAGGCTTTGATTATGTTCCCACCCATACTGAAGCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005678.6 |
||
| CDS-3UTR GCA 90 bp | TGGAGCTGTTTAGAGTTCCTTCAATACCTCCCGCACCAGGAGCACACCTGGTGCAGATATCTCACATGTTaGCAGCTGCTCACACACCCA | + |
|
Preference number: 4 (lower is better) Translates to: WSCLEFLQYLPHQEHTWCRYLTC*QLLTHP Trigger: TGGGTGTGTGAGCAGCTGGCAACATGTGAGATATCT...GCACCAGGTGTGCTCCTGGTGCGGGAGGTATTGAAGGAACTCTAAACAGCTCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005678.6 |
||
| CDS-3UTR CCA 90 bp | GAAGAAAAGTTAAGTGGCTGCCCTCTGACTCAGGCAGAAAAACAGCAGCCTGCATTCCTTAGATCCTCCTaGAGTCCGGTCAGGTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: EEKLSGCPLTQAEKQQPAFLRSS*SPVRFW Trigger: CCAGAACCTGACCGGACTCCAGGAGGATCTAAGGAA...TGCAGGCTGCTGTTTTTCTGCCTGAGTCAGAGGGCAGCCACTTAACTTTTCTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000005678.6 |
||
| CDS-3UTR CCA 90 bp | CTTCGAAATCTTTGTTCTCAGCAGCTCCCTGGTTGGCTCAGCTGCCCACATGCATTTGAGTTCTGGGATTaGGCGTTCCTTAGATCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LRNLCSQQLPGWLSCPHAFEFWD*AFLRSS Trigger: GGAGGATCTAAGGAACGCCCAATCCCAGAACTCAAA...TGCATGTGGGCAGCTGAGCCAACCAGGGAGCTGCTGAGAACAAAGATTTCGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005678.6 |
||
| CDS-3UTR CCA 90 bp | CTTCGAAATCTTTGTTCTCAGCAGCTCCCTGGTTGGCTCAGCTGCCCACATGCAAGTCTGTTCAGGTTCTaGGAGAGTTTTGAGTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LRNLCSQQLPGWLSCPHASLFRF*ESFEFW Trigger: CCAGAACTCAAAACTCTCCCAGAACCTGAACAGACT...TGCATGTGGGCAGCTGAGCCAACCAGGGAGCTGCTGAGAACAAAGATTTCGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005678.6 |
||
| CDS-3UTR CCA 90 bp | TTTGTAGACCAGGCTGGCCTCGAACTCAGAAATTCGCTTGTCTCTGCCTCCCAATTTGCCACCTCTTCCTaGAGTTTCTCTAGAGAATCG | + |
|
Preference number: 4 (lower is better) Translates to: FVDQAGLELRNSLVSASQFATSS*SFSRES Trigger: CGATTCTCTAGAGAAACTCCAGGAAGAGGTGGCAAA...TTGGGAGGCAGAGACAAGCGAATTTCTGAGTTCGAGGCCAGCCTGGTCTACAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005678.6 |
||
| CDS-3UTR TCA 90 bp | CTGCTTCAGTATGGGTGGGAACATAATCAAAGCCTTCGGTCACAGAGAGGGCCCAGGTTCCCAGTATCCTaGGTATTCATTTTCTTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: LLQYGWEHNQSLRSQRGPRFPVS*VFIFFH Trigger: ATGGAAGAAAATGAATACTCAGGATACTGGGAACCT...GGGCCCTCTCTGTGACCGAAGGCTTTGATTATGTTCCCACCCATACTGAAGCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005678.6 |
||
| CDS-3UTR TCA 90 bp | GAAGAAAAGTTAAGTGGCTGCCCTCTGACTCAGGCAGAAAAACAGCAGCCTGCATTCTTGCAAGTTTTGTaGCATCTGAACAACCTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: EEKLSGCPLTQAEKQQPAFLQVL*HLNNLG Trigger: TCCCAGGTTGTTCAGATGTCACAAAACTTGCAAGAA...TGCAGGCTGCTGTTTTTCTGCCTGAGTCAGAGGGCAGCCACTTAACTTTTCTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000005678.6 |
||
| CDS-3UTR CCA 90 bp | GCATCCACCAGCTGCTTCAGTATGGGTGGGAACATAATCAAAGCCTTCGGTCACTGCTTCTGTTCAGCTTaGAGTTCTTGCAAGTTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: ASTSCFSMGGNIIKAFGHCFCSA*SSCKFC Trigger: ACAAAACTTGCAAGAACTCCAAGCTGAACAGAAGCA...GTGACCGAAGGCTTTGATTATGTTCCCACCCATACTGAAGCAGCTGGTGGATGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005678.6 |
||
| CDS-3UTR CCA 90 bp | CAGAGATCCTTTATTAAGCAGGGAAGAAAAGTTAAGTGGCTGCCCTCTGACTCATGTTCCTTTTGGCTGTaGATGCTGACTAGTCGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: QRSFIKQGRKVKWLPSDSCSFWL*MLTSRP Trigger: AGGGCGACTAGTCAGCATCCACAGCCAAAAGGAACA...TGAGTCAGAGGGCAGCCACTTAACTTTTCTTCCCTGCTTAATAAAGGATCTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005678.6 |
||
| CDS-3UTR CCA 90 bp | CAGAGATCCTTTATTAAGCAGGGAAGAAAAGTTAAGTGGCTGCCCTCTGACTCAGTTATTGGGCTCCCCTaGATTCCAGTTGCTATAACC | + |
|
Preference number: 4 (lower is better) Translates to: QRSFIKQGRKVKWLPSDSVIGLP*IPVAIT Trigger: GGTTATAGCAACTGGAATCCAGGGGAGCCCAATAAC...TGAGTCAGAGGGCAGCCACTTAACTTTTCTTCCCTGCTTAATAAAGGATCTCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005678.6 |
||
| CDS-3UTR CAA 90 bp | ATGCCCGTAGTCAGGGAGCTAGCAAGGCTGGGGCCCAGGTTTGAGGAAGGCAGATTGGGGTGGGCCTTGTaGGAGTCACAGAGGCTAAGG | + |
|
Preference number: 5 (lower is better) Translates to: MPVVRELARLGPRFEEGRLGWAL*ESQRLR Trigger: CCTTAGCCTCTGTGACTCCAACAAGGCCCACCCCAA...TCTGCCTTCCTCAAACCTGGGCCCCAGCCTTGCTAGCTCCCTGACTACGGGCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005678.6 |
||
| CDS GCA 90 bp | AGTCCTCACCCTGGCCCCCGTTATTGGGCTCCCCTGGATTCCAGTTaGTATAACCCACAGGGCTCCCGTCCGACCATACAAACTCTCCCT | + |
|
Preference number: 5 (lower is better) Translates to: SPHPGPRYWAPLDSS*YNPQGSRPTIQTLP Trigger: AGGGAGAGTTTGTATGGTCGGACGGGAGCCCTGTGGGTTATAGCAACTGGAATCCAGGGGAGCCCAATAACGGGGGCCAGGGTGAGGACT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENSMUST00000005678.6 ENSMUST00000207463.2 ENSMUST00000207635.2 ENSMUST00000208145.2 ENSMUST00000208438.2 ENSMUST00000208492.2 ENSMUST00000208603.2 |
||
| CDS GCA 90 bp | TCTCACATGTTGCCAGCTGCTCACACACCCATGCATCCAAGTAGCTaGGGCAGAAGGCGTCGTTCCACTGGCCGGATCCCCGCATCATCA | + |
|
Preference number: 5 (lower is better) Translates to: SHMLPAAHTPMHPSS*GRRRRSTGRIPASS Trigger: TGATGATGCGGGGATCCGGCCAGTGGAACGACGCCTTCTGCCGCAGCTACTTGGATGCATGGGTGTGTGAGCAGCTGGCAACATGTGAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000005678.6 ENSMUST00000207463.2 ENSMUST00000207635.2 ENSMUST00000208145.2 ENSMUST00000208438.2 ENSMUST00000208492.2 ENSMUST00000208603.2 |
||
| CDS CCA 90 bp | CATCATCACACAGTCCTCACCCTGGCCCCCGTTATTGGGCTCCCCTaGATTCCAGTTGCTATAACCCACAGGGCTCCCGTCCGACCATAC | + |
|
Preference number: 5 (lower is better) Translates to: HHHTVLTLAPVIGLP*IPVAITHRAPVRPY Trigger: GTATGGTCGGACGGGAGCCCTGTGGGTTATAGCAACTGGAATCCAGGGGAGCCCAATAACGGGGGCCAGGGTGAGGACTGTGTGATGATG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENSMUST00000005678.6 ENSMUST00000207463.2 ENSMUST00000207635.2 ENSMUST00000208145.2 ENSMUST00000208438.2 ENSMUST00000208492.2 ENSMUST00000208603.2 |
||
| CDS GCA 90 bp | AGGAAGTCCTGTTCCTTTTGGCTGTGGATGCTGACTAGTCGCCCTTaGAGGTCACTGCAGGCGAACCTGGCCTGGATCCACTGCTTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: RKSCSFWLWMLTSRP*RSLQANLAWIHCLE Trigger: CTCCAAGCAGTGGATCCAGGCCAGGTTCGCCTGCAGTGACCTGCAAGGGCGACTAGTCAGCATCCACAGCCAAAAGGAACAGGACTTCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000005678.6 ENSMUST00000207463.2 ENSMUST00000207635.2 ENSMUST00000208145.2 ENSMUST00000208438.2 ENSMUST00000208492.2 ENSMUST00000208603.2 |
||
| CDS-3UTR CAA 90 bp | GGGTATCCTCAGGGCCCAGCTGTTTCCACGATAAAGGTAGAGGAGAAATCCAGAGCAGGCCAGCCCACATaGCTGTGCTCAGCAGCCCCA | + |
|
Preference number: 5 (lower is better) Translates to: GYPQGPAVSTIKVEEKSRAGQPT*LCSAAP Trigger: TGGGGCTGCTGAGCACAGCAATGTGGGCTGGCCTGC...TCTGGATTTCTCCTCTACCTTTATCGTGGAAACAGCTGGGCCCTGAGGATACCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005678.6 |
||
| CDS CCA 90 bp | GCCCTTGCAGGTCACTGCAGGCGAACCTGGCCTGGATCCACTGCTTaGAGCCCTTGCCAAAATAGTAGCACTTCTGTTGGAAATGGAGCC | + |
|
Preference number: 5 (lower is better) Translates to: ALAGHCRRTWPGSTA*SPCQNSSTSVGNGA Trigger: GGCTCCATTTCCAACAGAAGTGCTACTATTTTGGCAAGGGCTCCAAGCAGTGGATCCAGGCCAGGTTCGCCTGCAGTGACCTGCAAGGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000005678.6 ENSMUST00000207463.2 ENSMUST00000207635.2 ENSMUST00000208145.2 ENSMUST00000208438.2 ENSMUST00000208492.2 ENSMUST00000208603.2 |
||
| CDS-3UTR CAA 90 bp | CTCTGCCTCCCAAGTGCTGGGACTAAAGGCCTGCACCACTACGCCTGGTTGCAGGAGAGACATTCTGAATaGCAGTGTCTCCCAGCTGTT | + |
|
Preference number: 5 (lower is better) Translates to: LCLPSAGTKGLHHYAWLQERHSE*QCLPAV Trigger: AACAGCTGGGAGACACTGCAATTCAGAATGTCTCTC...CTGCAACCAGGCGTAGTGGTGCAGGCCTTTAGTCCCAGCACTTGGGAGGCAGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005678.6 |
||
| CDS-3UTR CAA 90 bp | ATGCCCGTAGTCAGGGAGCTAGCAAGGCTGGGGCCCAGGTTTGAGGAAGGCAGAATCCAGGAATCCTTCTaGTTGATGTGTTGCATCAGG | + |
|
Preference number: 5 (lower is better) Translates to: MPVVRELARLGPRFEEGRIQESF*LMCCIR Trigger: CCTGATGCAACACATCAACAAGAAGGATTCCTGGAT...TCTGCCTTCCTCAAACCTGGGCCCCAGCCTTGCTAGCTCCCTGACTACGGGCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005678.6 |
||
| CDS-3UTR CAA 90 bp | GAGCCAGGCTCGCCTTGCTGGAGCTGTTTAGAGTTCCTTCAATACCTCCCGCACAACTCTCCCTCCATATaGAGATCCTGGAGGCCAATC | + |
|
Preference number: 5 (lower is better) Translates to: EPGSPCWSCLEFLQYLPHNSPSI*RSWRPI Trigger: GATTGGCCTCCAGGATCTCAATATGGAGGGAGAGTT...GTGCGGGAGGTATTGAAGGAACTCTAAACAGCTCCAGCAAGGCGAGCCTGGCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005678.6 |
||
| CDS CCA 90 bp | TCTTGGAGTCTGTTCAGGTTCTGGGAGAGTTTTGAGTTCTGGGATTaGGCGTTCCTTAGATCCTCCTGGAGTCCGGTCAGGTTCTGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: SWSLFRFWESFEFWD*AFLRSSWSPVRFWE Trigger: CTCCCAGAACCTGACCGGACTCCAGGAGGATCTAAGGAACGCCCAATCCCAGAACTCAAAACTCTCCCAGAACCTGAACAGACTCCAAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000005678.6 ENSMUST00000207463.2 ENSMUST00000207635.2 ENSMUST00000208145.2 ENSMUST00000208438.2 ENSMUST00000208492.2 ENSMUST00000208603.2 |
||
| CDS-3UTR CAA 90 bp | CTCTGCCTCCCAAGTGCTGGGACTAAAGGCCTGCACCACTACGCCTGGTTGCAGGGACTTCTGGGCCAATaGATTACTCTGGAATTTTTG | + |
|
Preference number: 5 (lower is better) Translates to: LCLPSAGTKGLHHYAWLQGLLGQ*ITLEFL Trigger: CAAAAATTCCAGAGTAATCAATTGGCCCAGAAGTCC...CTGCAACCAGGCGTAGTGGTGCAGGCCTTTAGTCCCAGCACTTGGGAGGCAGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005678.6 |
||
| CDS CCA 90 bp | TTCTTGTTGATGTGTTGCATCAGGAAGTCCTGTTCCTTTTGGCTGTaGATGCTGACTAGTCGCCCTTGCAGGTCACTGCAGGCGAACCTG | + |
|
Preference number: 5 (lower is better) Translates to: FLLMCCIRKSCSFWL*MLTSRPCRSLQANL Trigger: CAGGTTCGCCTGCAGTGACCTGCAAGGGCGACTAGTCAGCATCCACAGCCAAAAGGAACAGGACTTCCTGATGCAACACATCAACAAGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000005678.6 ENSMUST00000207463.2 ENSMUST00000207635.2 ENSMUST00000208145.2 ENSMUST00000208438.2 ENSMUST00000208492.2 ENSMUST00000208603.2 |
||
| CDS CCA 90 bp | GAATCCTTCTTGTTGATGTGTTGCATCAGGAAGTCCTGTTCCTTTTaGCTGTGGATGCTGACTAGTCGCCCTTGCAGGTCACTGCAGGCG | + |
|
Preference number: 5 (lower is better) Translates to: ESFLLMCCIRKSCSF*LWMLTSRPCRSLQA Trigger: CGCCTGCAGTGACCTGCAAGGGCGACTAGTCAGCATCCACAGCCAAAAGGAACAGGACTTCCTGATGCAACACATCAACAAGAAGGATTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000005678.6 ENSMUST00000207463.2 ENSMUST00000207635.2 ENSMUST00000208145.2 ENSMUST00000208438.2 ENSMUST00000208492.2 ENSMUST00000208603.2 |
||
| CDS-3UTR CAA 90 bp | CTGGGGCCCAGGTTTGAGGAAGGCAGATGGAATGGGATGGCCAGCTTAGCTGGAATAGTAGCACTTCTGTaGGAAATGGAGCCAGTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: LGPRFEEGRWNGMASLAGIVALL*EMEPVL Trigger: AAGAACTGGCTCCATTTCCAACAGAAGTGCTACTAT...TCCAGCTAAGCTGGCCATCCCATTCCATCTGCCTTCCTCAAACCTGGGCCCCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005678.6 |
||
| CDS-3UTR CAA 90 bp | GAGCCAGGCTCGCCTTGCTGGAGCTGTTTAGAGTTCCTTCAATACCTCCCGCACCAGGAATCCTTCTTGTaGATGTGTTGCATCAGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: EPGSPCWSCLEFLQYLPHQESFL*MCCIRK Trigger: CTTCCTGATGCAACACATCAACAAGAAGGATTCCTG...GTGCGGGAGGTATTGAAGGAACTCTAAACAGCTCCAGCAAGGCGAGCCTGGCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005678.6 |
||
| CDS-3UTR CAA 90 bp | GGGTATCCTCAGGGCCCAGCTGTTTCCACGATAAAGGTAGAGGAGAAATCCAGACAGATATCTCACATGTaGCCAGCTGCTCACACACCC | + |
|
Preference number: 5 (lower is better) Translates to: GYPQGPAVSTIKVEEKSRQISHM*PAAHTP Trigger: GGGTGTGTGAGCAGCTGGCAACATGTGAGATATCTG...TCTGGATTTCTCCTCTACCTTTATCGTGGAAACAGCTGGGCCCTGAGGATACCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005678.6 |
||
| CDS TCA 90 bp | AGATCCTCCTGGAGTCCGGTCAGGTTCTGGGAGAGCCGAGAGTCCTaGGCTTTCATTTGCTTCTGTTCAGCTTGGAGTTCTTGCAAGTTT | + |
|
Preference number: 5 (lower is better) Translates to: RSSWSPVRFWESRES*AFICFCSAWSSCKF Trigger: AAACTTGCAAGAACTCCAAGCTGAACAGAAGCAAATGAAAGCTCAGGACTCTCGGCTCTCCCAGAACCTGACCGGACTCCAGGAGGATCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000005678.6 ENSMUST00000207463.2 ENSMUST00000207635.2 ENSMUST00000208145.2 ENSMUST00000208492.2 ENSMUST00000208603.2 |
||
| CDS-3UTR CAA 90 bp | CTTCGAAATCTTTGTTCTCAGCAGCTCCCTGGTTGGCTCAGCTGCCCACATGCACCCAGGGATTTGATGTaGACTAGATCGTCTTGGAGT | + |
|
Preference number: 5 (lower is better) Translates to: LRNLCSQQLPGWLSCPHAPRDLM*TRSSWS Trigger: ACTCCAAGACGATCTAGTCAACATCAAATCCCTGGG...TGCATGTGGGCAGCTGAGCCAACCAGGGAGCTGCTGAGAACAAAGATTTCGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005678.6 |
||
| CDS-3UTR CAA 90 bp | CTACCAGACAGAGCCAGGCTCGCCTTGCTGGAGCTGTTTAGAGTTCCTTCAATATCTCTATCCACAGCTTaGCCACCTCTTCCTGGAGTT | + |
|
Preference number: 5 (lower is better) Translates to: LPDRARLALLELFRVPSISLSTA*PPLPGV Trigger: AACTCCAGGAAGAGGTGGCAAAGCTGTGGATAGAGA...TATTGAAGGAACTCTAAACAGCTCCAGCAAGGCGAGCCTGGCTCTGTCTGGTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005678.6 |
||
| CDS-3UTR CAA 90 bp | GGGTATCCTCAGGGCCCAGCTGTTTCCACGATAAAGGTAGAGGAGAAATCCAGAGTCCTGAGCTTTCATTaGCTTCTGTTCAGCTTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: GYPQGPAVSTIKVEEKSRVLSFH*LLFSLE Trigger: CTCCAAGCTGAACAGAAGCAAATGAAAGCTCAGGAC...TCTGGATTTCTCCTCTACCTTTATCGTGGAAACAGCTGGGCCCTGAGGATACCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005678.6 |
||
| CDS GCA 90 bp | TTGAGATCCTGGAGGCCAATCCAGGAATCCTTCTTGTTGATGTGTTaGATCAGGAAGTCCTGTTCCTTTTGGCTGTGGATGCTGACTAGT | + |
|
Preference number: 5 (lower is better) Translates to: LRSWRPIQESFLLMC*IRKSCSFWLWMLTS Trigger: ACTAGTCAGCATCCACAGCCAAAAGGAACAGGACTTCCTGATGCAACACATCAACAAGAAGGATTCCTGGATTGGCCTCCAGGATCTCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000005678.6 ENSMUST00000207463.2 ENSMUST00000207635.2 ENSMUST00000208145.2 ENSMUST00000208438.2 ENSMUST00000208492.2 ENSMUST00000208603.2 |
||
| CDS CCA 90 bp | AGGGATTTGATGTTGACTAGATCGTCTTGGAGTCTGTTCAGGTTCTaGGAGAGTTTTGAGTTCTGGGATTGGGCGTTCCTTAGATCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: RDLMLTRSSWSLFRF*ESFEFWDWAFLRSS Trigger: GGAGGATCTAAGGAACGCCCAATCCCAGAACTCAAAACTCTCCCAGAACCTGAACAGACTCCAAGACGATCTAGTCAACATCAAATCCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000005678.6 ENSMUST00000207463.2 ENSMUST00000207635.2 ENSMUST00000208145.2 ENSMUST00000208438.2 ENSMUST00000208492.2 ENSMUST00000208603.2 |
||
| CDS-3UTR CAA 90 bp | TTTGTAGACCAGGCTGGCCTCGAACTCAGAAATTCGCTTGTCTCTGCCTCCCAATTGCTTCTGTTCAGCTaGGAGTTCTTGCAAGTTTTG | + |
|
Preference number: 5 (lower is better) Translates to: FVDQAGLELRNSLVSASQLLLFS*EFLQVL Trigger: CAAAACTTGCAAGAACTCCAAGCTGAACAGAAGCAA...TTGGGAGGCAGAGACAAGCGAATTTCTGAGTTCGAGGCCAGCCTGGTCTACAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005678.6 |
||
| CDS TCA 90 bp | GAAATGGAGCCAGTTCTTGGGACATATGTTGCATGCAGTTCCCTTTaGAATCAGTATCTCTATCCACAGCTTTGCCACCTCTTCCTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: EMEPVLGTYVACSSL*NQYLYPQLCHLFLE Trigger: CTCCAGGAAGAGGTGGCAAAGCTGTGGATAGAGATACTGATTTCAAAGGGAACTGCATGCAACATATGTCCCAAGAACTGGCTCCATTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000005678.6 ENSMUST00000207463.2 ENSMUST00000207635.2 ENSMUST00000208145.2 ENSMUST00000208438.2 ENSMUST00000208492.2 ENSMUST00000208603.2 |
||
| CDS-3UTR CAA 90 bp | CAGAGATCCTTTATTAAGCAGGGAAGAAAAGTTAAGTGGCTGCCCTCTGACTCAAAATGGAGCCAGTTCTaGGGACATATGTTGCATGCA | + |
|
Preference number: 5 (lower is better) Translates to: QRSFIKQGRKVKWLPSDSKWSQF*GHMLHA Trigger: TGCATGCAACATATGTCCCAAGAACTGGCTCCATTT...TGAGTCAGAGGGCAGCCACTTAACTTTTCTTCCCTGCTTAATAAAGGATCTCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005678.6 |
||
| CDS GCA 72 bp | TTGCCAGCTGCTCACACACCCATGCATCCAAGTAGCTaGGGCAGAAGGCGTCGTTCCACTGGCCGGATCCCC | + |
|
Preference number: 6 (lower is better) Translates to: LPAAHTPMHPSS*GRRRRSTGRIP Trigger: GGGGATCCGGCCAGTGGAACGACGCCTTCTGCCGCAGCTACTTGGATGCATGGGTGTGTGAGCAGCTGGCAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000005678.6 ENSMUST00000207463.2 ENSMUST00000207635.2 ENSMUST00000208145.2 ENSMUST00000208438.2 ENSMUST00000208492.2 ENSMUST00000208603.2 |
||
| CDS TCA 72 bp | CAGCCCACATTGCTGTGCTCAGCAGCCCCACCAACATaGGCTGTGTCCCACGTCTTGCACAGCAGCAACGCT | + |
|
Preference number: 6 (lower is better) Translates to: QPTLLCSAAPPT*AVSHVLHSSNA Trigger: AGCGTTGCTGCTGTGCAAGACGTGGGACACAGCTCATGTTGGTGGGGCTGCTGAGCACAGCAATGTGGGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000005678.6 ENSMUST00000208145.2 ENSMUST00000208438.2 ENSMUST00000208492.2 ENSMUST00000208603.2 |
||
| CDS CCA 72 bp | GCGTTCCTTAGATCCTCCTGGAGTCCGGTCAGGTTCTaGGAGAGCCGAGAGTCCTGGGACTTCTGGGCCAAT | + |
|
Preference number: 6 (lower is better) Translates to: AFLRSSWSPVRF*ESRESWDFWAN Trigger: ATTGGCCCAGAAGTCCCAGGACTCTCGGCTCTCCCAGAACCTGACCGGACTCCAGGAGGATCTAAGGAACGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208438.2 |
||
| CDS TCA 72 bp | GCATCAGGAAGTCCTGTTCCTTTTGGCTGTGGATGCTaGCTAGTCGCCCTTGCAGGTCACTGCAGGCGAACC | + |
|
Preference number: 6 (lower is better) Translates to: ASGSPVPFGCGC*LVALAGHCRRT Trigger: GGTTCGCCTGCAGTGACCTGCAAGGGCGACTAGTCAGCATCCACAGCCAAAAGGAACAGGACTTCCTGATGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000005678.6 ENSMUST00000207463.2 ENSMUST00000207635.2 ENSMUST00000208145.2 ENSMUST00000208438.2 ENSMUST00000208492.2 ENSMUST00000208603.2 |
||
| CDS GCA 72 bp | TCTCCCAGCTGTTTTAGATTCTTCTCCGTTTCCCAGTaGCACAGAAGAAGCAGGGCCAGCAGGCCAGCCCAC | + |
|
Preference number: 6 (lower is better) Translates to: SPSCFRFFSVSQ*HRRSRASRPAH Trigger: GTGGGCTGGCCTGCTGGCCCTGCTTCTTCTGTGGCACTGGGAAACGGAGAAGAATCTAAAACAGCTGGGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000005678.6 ENSMUST00000207635.2 ENSMUST00000208145.2 ENSMUST00000208438.2 ENSMUST00000208492.2 ENSMUST00000208603.2 |
||
| CDS CCA 72 bp | GCATCATCACACAGTCCTCACCCTGGCCCCCGTTATTaGGCTCCCCTGGATTCCAGTTGCTATAACCCACAG | + |
|
Preference number: 6 (lower is better) Translates to: ASSHSPHPGPRY*APLDSSCYNPQ Trigger: CTGTGGGTTATAGCAACTGGAATCCAGGGGAGCCCAATAACGGGGGCCAGGGTGAGGACTGTGTGATGATGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENSMUST00000005678.6 ENSMUST00000207463.2 ENSMUST00000207635.2 ENSMUST00000208145.2 ENSMUST00000208438.2 ENSMUST00000208492.2 ENSMUST00000208603.2 |
||
| CDS CAA 90 bp | GCCTTGTTGGAGTCACAGAGGCTAAGGGGGCAGATATCTCACATGTaGCCAGCTGCTCACACACCCATGCATCCAAGTAGCTGCGGCAGA | + |
|
Preference number: 6 (lower is better) Translates to: ALLESQRLRGQISHM*PAAHTPMHPSSCGR Trigger: TCTGCCGCAGCTACTTGGATGCATGGGTGTGTGAGCAGCTGGCAACATGTGAGATATCTGCCCCCTTAGCCTCTGTGACTCCAACAAGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENSMUST00000005678.6 ENSMUST00000207463.2 ENSMUST00000207635.2 ENSMUST00000208145.2 ENSMUST00000208438.2 ENSMUST00000208492.2 ENSMUST00000208603.2 |
||
| CDS CCA 72 bp | GGTCACTGCAGGCGAACCTGGCCTGGATCCACTGCTTaGAGCCCTTGCCAAAATAGTAGCACTTCTGTTGGA | + |
|
Preference number: 6 (lower is better) Translates to: GHCRRTWPGSTA*SPCQNSSTSVG Trigger: TCCAACAGAAGTGCTACTATTTTGGCAAGGGCTCCAAGCAGTGGATCCAGGCCAGGTTCGCCTGCAGTGACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000005678.6 ENSMUST00000207463.2 ENSMUST00000207635.2 ENSMUST00000208145.2 ENSMUST00000208438.2 ENSMUST00000208492.2 ENSMUST00000208603.2 |
||
| CDS GCA 72 bp | AGATATCTCACATGTTGCCAGCTGCTCACACACCCATaGATCCAAGTAGCTGCGGCAGAAGGCGTCGTTCCA | + |
|
Preference number: 6 (lower is better) Translates to: RYLTCCQLLTHP*IQVAAAEGVVP Trigger: TGGAACGACGCCTTCTGCCGCAGCTACTTGGATGCATGGGTGTGTGAGCAGCTGGCAACATGTGAGATATCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000005678.6 ENSMUST00000207463.2 ENSMUST00000207635.2 ENSMUST00000208145.2 ENSMUST00000208438.2 ENSMUST00000208492.2 ENSMUST00000208603.2 |
||
| CDS CCA 72 bp | CTGTTCAGGTTCTGGGAGAGTTTTGAGTTCTGGGATTaGGCGTTCCTTAGATCCTCCTGGAGTCCGGTCAGG | + |
|
Preference number: 6 (lower is better) Translates to: LFRFWESFEFWD*AFLRSSWSPVR Trigger: CCTGACCGGACTCCAGGAGGATCTAAGGAACGCCCAATCCCAGAACTCAAAACTCTCCCAGAACCTGAACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000005678.6 ENSMUST00000207463.2 ENSMUST00000207635.2 ENSMUST00000208145.2 ENSMUST00000208438.2 ENSMUST00000208492.2 ENSMUST00000208603.2 |
||
| CDS CAA 72 bp | GAGTCACAGAGGCTAAGGGGGCAGATATCTCACATGTaGCCAGCTGCTCACACACCCATGCATCCAAGTAGC | + |
|
Preference number: 6 (lower is better) Translates to: ESQRLRGQISHM*PAAHTPMHPSS Trigger: GCTACTTGGATGCATGGGTGTGTGAGCAGCTGGCAACATGTGAGATATCTGCCCCCTTAGCCTCTGTGACTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENSMUST00000005678.6 ENSMUST00000207463.2 ENSMUST00000207635.2 ENSMUST00000208145.2 ENSMUST00000208438.2 ENSMUST00000208492.2 ENSMUST00000208603.2 |
||
| CDS TCA 72 bp | TGGAGTCCGGTCAGGTTCTGGGAGAGCCGAGAGTCCTaGGCTTTCATTTGCTTCTGTTCAGCTTGGAGTTCT | + |
|
Preference number: 6 (lower is better) Translates to: WSPVRFWESRES*AFICFCSAWSS Trigger: AGAACTCCAAGCTGAACAGAAGCAAATGAAAGCTCAGGACTCTCGGCTCTCCCAGAACCTGACCGGACTCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000005678.6 ENSMUST00000207463.2 ENSMUST00000207635.2 ENSMUST00000208145.2 ENSMUST00000208492.2 ENSMUST00000208603.2 |
||
| CDS TCA 72 bp | GGCTCCCGTCCGACCATACAAACTCTCCCTCCATATTaGGATCCTGGAGGCCAATCCAGGAATCCTTCTTGT | + |
|
Preference number: 6 (lower is better) Translates to: GSRPTIQTLPPY*DPGGQSRNPSC Trigger: ACAAGAAGGATTCCTGGATTGGCCTCCAGGATCTCAATATGGAGGGAGAGTTTGTATGGTCGGACGGGAGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000005678.6 ENSMUST00000207463.2 ENSMUST00000207635.2 ENSMUST00000208145.2 ENSMUST00000208438.2 ENSMUST00000208492.2 ENSMUST00000208603.2 |
||
| CDS CCA 72 bp | TGGAGTCTGTTCAGGTTCTGGGAGAGTTTTGAGTTCTaGGATTGGGCGTTCCTTAGATCCTCCTGGAGTCCG | + |
|
Preference number: 6 (lower is better) Translates to: WSLFRFWESFEF*DWAFLRSSWSP Trigger: CGGACTCCAGGAGGATCTAAGGAACGCCCAATCCCAGAACTCAAAACTCTCCCAGAACCTGAACAGACTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000005678.6 ENSMUST00000207463.2 ENSMUST00000207635.2 ENSMUST00000208145.2 ENSMUST00000208438.2 ENSMUST00000208492.2 ENSMUST00000208603.2 |
||
| CDS CCA 72 bp | ATGTGTTGCATCAGGAAGTCCTGTTCCTTTTGGCTGTaGATGCTGACTAGTCGCCCTTGCAGGTCACTGCAG | + |
|
Preference number: 6 (lower is better) Translates to: MCCIRKSCSFWL*MLTSRPCRSLQ Trigger: CTGCAGTGACCTGCAAGGGCGACTAGTCAGCATCCACAGCCAAAAGGAACAGGACTTCCTGATGCAACACAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000005678.6 ENSMUST00000207463.2 ENSMUST00000207635.2 ENSMUST00000208145.2 ENSMUST00000208438.2 ENSMUST00000208492.2 ENSMUST00000208603.2 |
||
| CDS CCA 72 bp | TTGTTGATGTGTTGCATCAGGAAGTCCTGTTCCTTTTaGCTGTGGATGCTGACTAGTCGCCCTTGCAGGTCA | + |
|
Preference number: 6 (lower is better) Translates to: LLMCCIRKSCSF*LWMLTSRPCRS Trigger: TGACCTGCAAGGGCGACTAGTCAGCATCCACAGCCAAAAGGAACAGGACTTCCTGATGCAACACATCAACAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000005678.6 ENSMUST00000207463.2 ENSMUST00000207635.2 ENSMUST00000208145.2 ENSMUST00000208438.2 ENSMUST00000208492.2 ENSMUST00000208603.2 |
||
| CDS CAA 72 bp | GATCGTCTTGGAGTCTGTTCAGGTTCTGGGAGAGTTTaGAGTTCTGGGATTGGGCGTTCCTTAGATCCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: DRLGVCSGSGRV*SSGIGRSLDPP Trigger: AGGAGGATCTAAGGAACGCCCAATCCCAGAACTCAAAACTCTCCCAGAACCTGAACAGACTCCAAGACGATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000005678.6 ENSMUST00000207463.2 ENSMUST00000207635.2 ENSMUST00000208145.2 ENSMUST00000208438.2 ENSMUST00000208492.2 ENSMUST00000208603.2 |
||
| CDS CAA 72 bp | GCTGTGCGCTTCTCATTCAAGCCCAGGGATTTGATGTaGACTAGATCGTCTTGGAGTCTGTTCAGGTTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: AVRFSFKPRDLM*TRSSWSLFRFW Trigger: CCAGAACCTGAACAGACTCCAAGACGATCTAGTCAACATCAAATCCCTGGGCTTGAATGAGAAGCGCACAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000005678.6 ENSMUST00000207463.2 ENSMUST00000207635.2 ENSMUST00000208145.2 ENSMUST00000208438.2 ENSMUST00000208492.2 ENSMUST00000208603.2 |
||
| CDS CAA 90 bp | CCCTCCATATTGAGATCCTGGAGGCCAATCCAGGAATCCTTCTTGTaGATGTGTTGCATCAGGAAGTCCTGTTCCTTTTGGCTGTGGATG | + |
|
Preference number: 6 (lower is better) Translates to: PSILRSWRPIQESFL*MCCIRKSCSFWLWM Trigger: CATCCACAGCCAAAAGGAACAGGACTTCCTGATGCAACACATCAACAAGAAGGATTCCTGGATTGGCCTCCAGGATCTCAATATGGAGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000005678.6 ENSMUST00000207463.2 ENSMUST00000207635.2 ENSMUST00000208145.2 ENSMUST00000208438.2 ENSMUST00000208492.2 ENSMUST00000208603.2 |
||
| CDS CAA 90 bp | TCTCCCTCCATATTGAGATCCTGGAGGCCAATCCAGGAATCCTTCTaGTTGATGTGTTGCATCAGGAAGTCCTGTTCCTTTTGGCTGTGG | + |
|
Preference number: 6 (lower is better) Translates to: SPSILRSWRPIQESF*LMCCIRKSCSFWLW Trigger: CCACAGCCAAAAGGAACAGGACTTCCTGATGCAACACATCAACAAGAAGGATTCCTGGATTGGCCTCCAGGATCTCAATATGGAGGGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000005678.6 ENSMUST00000207463.2 ENSMUST00000207635.2 ENSMUST00000208145.2 ENSMUST00000208438.2 ENSMUST00000208492.2 ENSMUST00000208603.2 |
||
| CDS GCA 72 bp | TGGAGGCCAATCCAGGAATCCTTCTTGTTGATGTGTTaGATCAGGAAGTCCTGTTCCTTTTGGCTGTGGATG | + |
|
Preference number: 6 (lower is better) Translates to: WRPIQESFLLMC*IRKSCSFWLWM Trigger: CATCCACAGCCAAAAGGAACAGGACTTCCTGATGCAACACATCAACAAGAAGGATTCCTGGATTGGCCTCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000005678.6 ENSMUST00000207463.2 ENSMUST00000207635.2 ENSMUST00000208145.2 ENSMUST00000208438.2 ENSMUST00000208492.2 ENSMUST00000208603.2 |
||
| CDS CAA 72 bp | CAGGTTCTGGGAGAGCCGAGAGTCCTGAGCTTTCATTaGCTTCTGTTCAGCTTGGAGTTCTTGCAAGTTTTG | + |
|
Preference number: 6 (lower is better) Translates to: QVLGEPRVLSFH*LLFSLEFLQVL Trigger: CAAAACTTGCAAGAACTCCAAGCTGAACAGAAGCAAATGAAAGCTCAGGACTCTCGGCTCTCCCAGAACCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000005678.6 ENSMUST00000207463.2 ENSMUST00000207635.2 ENSMUST00000208145.2 ENSMUST00000208492.2 ENSMUST00000208603.2 |
||
| CDS CAA 72 bp | CTGGAGGCCAATCCAGGAATCCTTCTTGTTGATGTGTaGCATCAGGAAGTCCTGTTCCTTTTGGCTGTGGAT | + |
|
Preference number: 6 (lower is better) Translates to: LEANPGILLVDV*HQEVLFLLAVD Trigger: ATCCACAGCCAAAAGGAACAGGACTTCCTGATGCAACACATCAACAAGAAGGATTCCTGGATTGGCCTCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000005678.6 ENSMUST00000207463.2 ENSMUST00000207635.2 ENSMUST00000208145.2 ENSMUST00000208438.2 ENSMUST00000208492.2 ENSMUST00000208603.2 |
||
| CDS CAA 90 bp | GGAAATGGAGCCAGTTCTTGGGACATATGTTGCATGCAGTTCCCTTaGAAATCAGTATCTCTATCCACAGCTTTGCCACCTCTTCCTGGA | + |
|
Preference number: 6 (lower is better) Translates to: GNGASSWDICCMQFP*KSVSLSTALPPLPG Trigger: TCCAGGAAGAGGTGGCAAAGCTGTGGATAGAGATACTGATTTCAAAGGGAACTGCATGCAACATATGTCCCAAGAACTGGCTCCATTTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000005678.6 ENSMUST00000207463.2 ENSMUST00000207635.2 ENSMUST00000208145.2 ENSMUST00000208438.2 ENSMUST00000208492.2 ENSMUST00000208603.2 |
||
| CDS CCA 72 bp | TCCGACCATACAAACTCTCCCTCCATATTGAGATCCTaGAGGCCAATCCAGGAATCCTTCTTGTTGATGTGT | + |
|
Preference number: 6 (lower is better) Translates to: SDHTNSPSILRS*RPIQESFLLMC Trigger: ACACATCAACAAGAAGGATTCCTGGATTGGCCTCCAGGATCTCAATATGGAGGGAGAGTTTGTATGGTCGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000005678.6 ENSMUST00000207463.2 ENSMUST00000207635.2 ENSMUST00000208145.2 ENSMUST00000208438.2 ENSMUST00000208492.2 ENSMUST00000208603.2 |
||
| CDS CAA 72 bp | TTGAGATCCTGGAGGCCAATCCAGGAATCCTTCTTGTaGATGTGTTGCATCAGGAAGTCCTGTTCCTTTTGG | + |
|
Preference number: 6 (lower is better) Translates to: LRSWRPIQESFL*MCCIRKSCSFW Trigger: CCAAAAGGAACAGGACTTCCTGATGCAACACATCAACAAGAAGGATTCCTGGATTGGCCTCCAGGATCTCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000005678.6 ENSMUST00000207463.2 ENSMUST00000207635.2 ENSMUST00000208145.2 ENSMUST00000208438.2 ENSMUST00000208492.2 ENSMUST00000208603.2 |
||
| CDS TCA 72 bp | TTGCTTCTGTTCAGCTTGGAGTTCTTGCAAGTTTTGTaGCATCTGAACAACCTGGGACTTCTGGGCCAATTG | + |
|
Preference number: 6 (lower is better) Translates to: LLLFSLEFLQVL*HLNNLGLLGQL Trigger: CAATTGGCCCAGAAGTCCCAGGTTGTTCAGATGTCACAAAACTTGCAAGAACTCCAAGCTGAACAGAAGCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000005678.6 ENSMUST00000207463.2 ENSMUST00000207635.2 ENSMUST00000208145.2 ENSMUST00000208492.2 |
||
| CDS TCA 72 bp | CCAGTTCTTGGGACATATGTTGCATGCAGTTCCCTTTaGAATCAGTATCTCTATCCACAGCTTTGCCACCTC | + |
|
Preference number: 6 (lower is better) Translates to: PVLGTYVACSSL*NQYLYPQLCHL Trigger: GAGGTGGCAAAGCTGTGGATAGAGATACTGATTTCAAAGGGAACTGCATGCAACATATGTCCCAAGAACTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000005678.6 ENSMUST00000207463.2 ENSMUST00000207635.2 ENSMUST00000208145.2 ENSMUST00000208438.2 ENSMUST00000208492.2 ENSMUST00000208603.2 |
||
| CDS CAA 72 bp | GCCAGTTCTTGGGACATATGTTGCATGCAGTTCCCTTaGAAATCAGTATCTCTATCCACAGCTTTGCCACCT | + |
|
Preference number: 6 (lower is better) Translates to: ASSWDICCMQFP*KSVSLSTALPP Trigger: AGGTGGCAAAGCTGTGGATAGAGATACTGATTTCAAAGGGAACTGCATGCAACATATGTCCCAAGAACTGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000005678.6 ENSMUST00000207463.2 ENSMUST00000207635.2 ENSMUST00000208145.2 ENSMUST00000208438.2 ENSMUST00000208492.2 ENSMUST00000208603.2 |
||
| CDS CAA 72 bp | ATATTGAGATCCTGGAGGCCAATCCAGGAATCCTTCTaGTTGATGTGTTGCATCAGGAAGTCCTGTTCCTTT | + |
|
Preference number: 6 (lower is better) Translates to: ILRSWRPIQESF*LMCCIRKSCSF Trigger: AAAGGAACAGGACTTCCTGATGCAACACATCAACAAGAAGGATTCCTGGATTGGCCTCCAGGATCTCAATAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000005678.6 ENSMUST00000207463.2 ENSMUST00000207635.2 ENSMUST00000208145.2 ENSMUST00000208438.2 ENSMUST00000208492.2 ENSMUST00000208603.2 |
||
| CDS GCA 72 bp | TCTGTTGGAAATGGAGCCAGTTCTTGGGACATATGTTaGATGCAGTTCCCTTTGAAATCAGTATCTCTATCC | + |
|
Preference number: 6 (lower is better) Translates to: SVGNGASSWDIC*MQFPLKSVSLS Trigger: GGATAGAGATACTGATTTCAAAGGGAACTGCATGCAACATATGTCCCAAGAACTGGCTCCATTTCCAACAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000005678.6 ENSMUST00000207463.2 ENSMUST00000207635.2 ENSMUST00000208145.2 ENSMUST00000208438.2 ENSMUST00000208492.2 ENSMUST00000208603.2 |
||
| CDS CAA 90 bp | CTTGGAGTTCTTGCAAGTTTTGTGACATCTGAACAACATTCTGAATaGCAGTGTCTCCCAGCTGTTTTAGATTCTTCTCCGTTTCCCAGT | + |
|
Preference number: 6 (lower is better) Translates to: LGVLASFVTSEQHSE*QCLPAVLDSSPFPS Trigger: ACTGGGAAACGGAGAAGAATCTAAAACAGCTGGGAGACACTGCAATTCAGAATGTTGTTCAGATGTCACAAAACTTGCAAGAACTCCAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000208603.2 |
||
| CDS CAA 72 bp | TTCTGTTGGAAATGGAGCCAGTTCTTGGGACATATGTaGCATGCAGTTCCCTTTGAAATCAGTATCTCTATC | + |
|
Preference number: 6 (lower is better) Translates to: FCWKWSQFLGHM*HAVPFEISISI Trigger: GATAGAGATACTGATTTCAAAGGGAACTGCATGCAACATATGTCCCAAGAACTGGCTCCATTTCCAACAGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000005678.6 ENSMUST00000207463.2 ENSMUST00000207635.2 ENSMUST00000208145.2 ENSMUST00000208438.2 ENSMUST00000208492.2 ENSMUST00000208603.2 |
||