RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FCER1G (Mus musculus)

Ensembl gene IDs: ENSMUSG00000058715

Ensembl transcript IDs: ENSMUST00000079957.12, ENSMUST00000193973.2

Found 13 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGGAAAAGAATGCAGCCAAGCACGTCTGTTCTGAAGCTACTGGGGTaGTTTCTCATGCTTCAGAGTCTCATATGTCTCCTGGCTCCGGGT +
Preference number: 1 (lower is better)
Translates to: GKRMQPSTSVLKLLG*FLMLQSLICLLAPG
Trigger: ACCCGGAGCCAGGAGACATATGAGACTCTGAAGCATGAGAAACCACCCCAGTAGCTTCAGAACAGACGTGCTTGGCTGCATTCTTTTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000193973.2
3UTR TCA 90 bp AGAGAATTAGAAGTGGGAAAAGAATGCAGCCAAGCACGTCTGTTCTaGAGCTACTGGGGTGGTTTCTCATGCTTCAGAGTCTCATATGTC +
Preference number: 1 (lower is better)
Translates to: RELEVGKECSQARLF*SYWGGFSCFRVSYV
Trigger: GACATATGAGACTCTGAAGCATGAGAAACCACCCCAGTAGCTTCAGAACAGACGTGCTTGGCTGCATTCTTTTCCCACTTCTAATTCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000193973.2
3UTR-3UTR TCA 90 bp GCAGCTTTATTGGGGGATAATCCCTTTCCATTGTTTAGTGAGAGTCGAGGATCACAAGCACGTCTGTTCTaGAGCTACTGGGGTGGTTTC +
Preference number: 2 (lower is better)
Translates to: AALLGDNPFPLFSESRGSQARLF*SYWGGF
Trigger: GAAACCACCCCAGTAGCTTCAGAACAGACGTGCTTG...TGATCCTCGACTCTCACTAAACAATGGAAAGGGATTATCCCCCAATAAAGCTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000193973.2
3UTR-3UTR GCA 90 bp GAGAGAATTAGAAGTGGGAAAAGAATGCAGCCAAGCACGTCTGTTCTGAAGCTAGAAGTGGGAAAAGAATaGAGCCAAGCACGTCTGTTC +
Preference number: 2 (lower is better)
Translates to: ERIRSGKRMQPSTSVLKLEVGKE*SQARLF
Trigger: GAACAGACGTGCTTGGCTGCATTCTTTTCCCACTTC...TAGCTTCAGAACAGACGTGCTTGGCTGCATTCTTTTCCCACTTCTAATTCTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000193973.2
3UTR-3UTR CCA 90 bp GCAGCTTTATTGGGGGATAATCCCTTTCCATTGTTTAGTGAGAGTCGAGGATCACTGAAGCTACTGGGGTaGTTTCTCATGCTTCAGAGT +
Preference number: 2 (lower is better)
Translates to: AALLGDNPFPLFSESRGSLKLLG*FLMLQS
Trigger: ACTCTGAAGCATGAGAAACCACCCCAGTAGCTTCAG...TGATCCTCGACTCTCACTAAACAATGGAAAGGGATTATCCCCCAATAAAGCTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000193973.2
3UTR-3UTR GCA 90 bp CCATTGTTTAGTGAGAGTCGAGGATCAGGGAAGGAAAAAGAAATGAAGCAAAGGGAAGTGGGAAAAGAATaGAGCCAAGCACGTCTGTTC +
Preference number: 2 (lower is better)
Translates to: PLFSESRGSGKEKEMKQREVGKE*SQARLF
Trigger: GAACAGACGTGCTTGGCTGCATTCTTTTCCCACTTC...CCTTTGCTTCATTTCTTTTTCCTTCCCTGATCCTCGACTCTCACTAAACAATGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000079957.12
ENSMUST00000193973.2
3UTR TCA 72 bp GAAGTGGGAAAAGAATGCAGCCAAGCACGTCTGTTCTaGAGCTACTGGGGTGGTTTCTCATGCTTCAGAGTC +
Preference number: 3 (lower is better)
Translates to: EVGKECSQARLF*SYWGGFSCFRV
Trigger: GACTCTGAAGCATGAGAAACCACCCCAGTAGCTTCAGAACAGACGTGCTTGGCTGCATTCTTTTCCCACTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000193973.2
CDS-3UTR TCA 90 bp CACAGAGGTGACCAAGAGGGCTCGGAGAGAATTAGAAGTGGGAAAAGAATGCAGGGCCCCGGGAAAGGTTaGAAGCCAGAAAAGAAACGC +
Preference number: 4 (lower is better)
Translates to: HRGDQEGSERIRSGKRMQGPGKG*KPEKKR
Trigger: GCGTTTCTTTTCTGGCTTTCAACCTTTCCCGGGGCC...CTGCATTCTTTTCCCACTTCTAATTCTCTCCGAGCCCTCTTGGTCACCTCTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000193973.2
CDS-3UTR GCA 90 bp AACCTTCAAAGCACAGAGGTGACCAAGAGGGCTCGGAGAGAATTAGAAGTGGGACGTGTAGACAGCATCTaGTTTCTCAGGCTAAGGCCC +
Preference number: 4 (lower is better)
Translates to: NLQSTEVTKRARRELEVGRVDSI*FLRLRP
Trigger: GGGCCTTAGCCTGAGAAAGCAGATGCTGTCTACACG...TCCCACTTCTAATTCTCTCCGAGCCCTCTTGGTCACCTCTGTGCTTTGAAGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000193973.2
CDS-3UTR GCA 90 bp GCAGCTTTATTGGGGGATAATCCCTTTCCATTGTTTAGTGAGAGTCGAGGATCATGGGGTGGTTTCTCATaGTTCAGAGTCTCATATGTC +
Preference number: 4 (lower is better)
Translates to: AALLGDNPFPLFSESRGSWGGFS*FRVSYV
Trigger: GACATATGAGACTCTGAAGCATGAGAAACCACCCCA...TGATCCTCGACTCTCACTAAACAATGGAAAGGGATTATCCCCCAATAAAGCTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000079957.12
CDS GCA 90 bp ATATGTCTCCTGGCTCCGGGTGTTCAGGCCCGTGTAGACAGCATCTaGTTTCTCACGGCTGGCTATAGCTGCCTTTCGGACCTGGATCTT +
Preference number: 5 (lower is better)
Translates to: ICLLAPGVQARVDSI*FLTAGYSCLSDLDL
Trigger: AAGATCCAGGTCCGAAAGGCAGCTATAGCCAGCCGTGAGAAAGCAGATGCTGTCTACACGGGCCTGAACACCCGGAGCCAGGAGACATAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079957.12
CDS GCA 72 bp ACGTGGGAGACTCCATACCTCACGGCTGGCTATAGCTaGCTTTCGGACCTGGATCTTGAGTCGACAGTAGAG +
Preference number: 6 (lower is better)
Translates to: TWETPYLTAGYS*LSDLDLESTVE
Trigger: CTCTACTGTCGACTCAAGATCCAGGTCCGAAAGGCAGCTATAGCCAGCCGTGAGGTATGGAGTCTCCCACGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000193973.2
CDS GCA 72 bp GTAGACAGCATCTGCTTTCTCACGGCTGGCTATAGCTaGCTTTCGGACCTGGATCTTGAGTCGACAGTAGAG +
Preference number: 6 (lower is better)
Translates to: VDSICFLTAGYS*LSDLDLESTVE
Trigger: CTCTACTGTCGACTCAAGATCCAGGTCCGAAAGGCAGCTATAGCCAGCCGTGAGAAAGCAGATGCTGTCTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079957.12