Pregenerated sensors for FCER1A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000005339Ensembl transcript IDs: ENSMUST00000049706.11, ENSMUST00000193017.2
Found 33 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGCATTTATGCAATTCCTGTGGAACAGACTTTTCTAGGGATCACATaGGTGGCCTTTGACAGTGGAGAAGCTATTGAGGATTCTGCAGAA | + |
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Preference number: 1 (lower is better) Translates to: SIYAIPVEQTFLGIT*VAFDSGEAIEDSAE Trigger: TTCTGCAGAATCCTCAATAGCTTCTCCACTGTCAAAGGCCACTCATGTGATCCCTAGAAAAGTCTGTTCCACAGGAATTGCATAAATGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049706.11 |
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| 3UTR-3UTR TCA 90 bp | GCTGCAGTTGGTTTAATGAAGCATTTATGCAATTCCTGTGGAACAGACTTTTCTCAGTGGAGAAGCTATTaGGGATTCTGCAGAAAATTA | + |
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Preference number: 2 (lower is better) Translates to: AAVGLMKHLCNSCGTDFSQWRSY*GFCRKL Trigger: TAATTTTCTGCAGAATCCTCAATAGCTTCTCCACTG...AGAAAAGTCTGTTCCACAGGAATTGCATAAATGCTTCATTAAACCAACTGCAGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049706.11 |
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| 3UTR CCA 72 bp | TTGCTATTTATTGCATGTTACATAACCAGCTGCAGTTaGTTTAATGAAGCATTTATGCAATTCCTGTGGAAC | + |
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Preference number: 3 (lower is better) Translates to: LLFIACYITSCS*FNEAFMQFLWN Trigger: GTTCCACAGGAATTGCATAAATGCTTCATTAAACCAACTGCAGCTGGTTATGTAACATGCAATAAATAGCAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049706.11 |
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| CDS-3UTR CCA 90 bp | CCTTTGACAGTGGAGAAGCTATTGAGGATTCTGCAGAAAATTACTGTTAAGAATAGTGCTAGGCACAGCTaGGCAGACCTTCCAGTGACC | + |
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Preference number: 4 (lower is better) Translates to: PLTVEKLLRILQKITVKNSARHS*ADLPVT Trigger: GGTCACTGGAAGGTCTGCCCAGCTGTGCCTAGCACT...ATTCTTAACAGTAATTTTCTGCAGAATCCTCAATAGCTTCTCCACTGTCAAAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049706.11 |
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| CDS-3UTR TCA 90 bp | TCACATGAGTGGCCTTTGACAGTGGAGAAGCTATTGAGGATTCTGCAGAAAATTCGGTGGCACTCACAATaGCCAAATGTGAAGAGTTCA | + |
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Preference number: 4 (lower is better) Translates to: SHEWPLTVEKLLRILQKIRWHSQ*PNVKSS Trigger: TGAACTCTTCACATTTGGTCATTGTGAGTGCCACCG...AATTTTCTGCAGAATCCTCAATAGCTTCTCCACTGTCAAAGGCCACTCATGTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049706.11 |
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| CDS-3UTR TCA 90 bp | TGGCCTTTGACAGTGGAGAAGCTATTGAGGATTCTGCAGAAAATTACTGTTAAGCGGTGGCACTCACAATaGCCAAATGTGAAGAGTTCA | + |
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Preference number: 4 (lower is better) Translates to: WPLTVEKLLRILQKITVKRWHSQ*PNVKSS Trigger: TGAACTCTTCACATTTGGTCATTGTGAGTGCCACCG...CTTAACAGTAATTTTCTGCAGAATCCTCAATAGCTTCTCCACTGTCAAAGGCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049706.11 ENSMUST00000193017.2 |
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| CDS-3UTR TCA 90 bp | GAGAAGCTATTGAGGATTCTGCAGAAAATTACTGTTAAGAATTGCTTCTTCAGCATGTCAGCAGATGTCTaGAGGAGCAGCCAATCTTGC | + |
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Preference number: 4 (lower is better) Translates to: EKLLRILQKITVKNCFFSMSADV*RSSQSC Trigger: GCAAGATTGGCTGCTCCTTCAGACATCTGCTGACAT...GCTGAAGAAGCAATTCTTAACAGTAATTTTCTGCAGAATCCTCAATAGCTTCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049706.11 ENSMUST00000193017.2 |
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| CDS-3UTR GCA 90 bp | TGGCCTTTGACAGTGGAGAAGCTATTGAGGATTCTGCAGAAAATTACTGTTAAGTGTAGTAGATCACCTTaGGGACATTCCAGTTCTTCC | + |
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Preference number: 4 (lower is better) Translates to: WPLTVEKLLRILQKITVKCSRSP*GHSSSS Trigger: GGAAGAACTGGAATGTCCGCAAGGTGATCTACTACA...CTTAACAGTAATTTTCTGCAGAATCCTCAATAGCTTCTCCACTGTCAAAGGCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049706.11 ENSMUST00000193017.2 |
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| CDS-3UTR CCA 90 bp | TGGCCTTTGACAGTGGAGAAGCTATTGAGGATTCTGCAGAAAATTACTGTTAAGCAGTTCTTCCAGCCATaGCATCTGATGTCAAAGGAT | + |
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Preference number: 4 (lower is better) Translates to: WPLTVEKLLRILQKITVKQFFQP*HLMSKD Trigger: ATCCTTTGACATCAGATGCCATGGCTGGAAGAACTG...CTTAACAGTAATTTTCTGCAGAATCCTCAATAGCTTCTCCACTGTCAAAGGCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049706.11 ENSMUST00000193017.2 |
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| 3UTR CAA 72 bp | GGATCACATGAGTGGCCTTTGACAGTGGAGAAGCTATaGAGGATTCTGCAGAAAATTACTGTTAAGAATTGC | + |
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Preference number: 4 (lower is better) Translates to: GSHEWPLTVEKL*RILQKITVKNC Trigger: GCAATTCTTAACAGTAATTTTCTGCAGAATCCTCAATAGCTTCTCCACTGTCAAAGGCCACTCATGTGATCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049706.11 |
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| CDS-3UTR GCA 90 bp | TGGCCTTTGACAGTGGAGAAGCTATTGAGGATTCTGCAGAAAATTACTGTTAAGAGGAGCAGCCAATCTTaGGTTACATTCAAGTACACA | + |
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Preference number: 4 (lower is better) Translates to: WPLTVEKLLRILQKITVKRSSQS*VTFKYT Trigger: TGTGTACTTGAATGTAACGCAAGATTGGCTGCTCCT...CTTAACAGTAATTTTCTGCAGAATCCTCAATAGCTTCTCCACTGTCAAAGGCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049706.11 ENSMUST00000193017.2 |
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| CDS-3UTR CCA 90 bp | GCTGCAGTTGGTTTAATGAAGCATTTATGCAATTCCTGTGGAACAGACTTTTCTCAGTTCTTCCAGCCATaGCATCTGATGTCAAAGGAT | + |
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Preference number: 4 (lower is better) Translates to: AAVGLMKHLCNSCGTDFSQFFQP*HLMSKD Trigger: ATCCTTTGACATCAGATGCCATGGCTGGAAGAACTG...AGAAAAGTCTGTTCCACAGGAATTGCATAAATGCTTCATTAAACCAACTGCAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049706.11 |
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| CDS-3UTR TCA 90 bp | GAGAAGCTATTGAGGATTCTGCAGAAAATTACTGTTAAGAATTGCTTCTTCAGCCACAATGACCAAATGTaGAGAGTTCACCTCAGAGAC | + |
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Preference number: 4 (lower is better) Translates to: EKLLRILQKITVKNCFFSHNDQM*RVHLRD Trigger: GTCTCTGAGGTGAACTCTTCACATTTGGTCATTGTG...GCTGAAGAAGCAATTCTTAACAGTAATTTTCTGCAGAATCCTCAATAGCTTCTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049706.11 ENSMUST00000193017.2 |
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| CDS-3UTR GCA 90 bp | GCTGCAGTTGGTTTAATGAAGCATTTATGCAATTCCTGTGGAACAGACTTTTCTAGGAGCAGCCAATCTTaGGTTACATTCAAGTACACA | + |
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Preference number: 4 (lower is better) Translates to: AAVGLMKHLCNSCGTDFSRSSQS*VTFKYT Trigger: TGTGTACTTGAATGTAACGCAAGATTGGCTGCTCCT...AGAAAAGTCTGTTCCACAGGAATTGCATAAATGCTTCATTAAACCAACTGCAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049706.11 |
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| CDS-3UTR GCA 90 bp | GAGAAGCTATTGAGGATTCTGCAGAAAATTACTGTTAAGAATTGCTTCTTCAGCTGTAGTAGATCACCTTaGGGACATTCCAGTTCTTCC | + |
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Preference number: 4 (lower is better) Translates to: EKLLRILQKITVKNCFFSCSRSP*GHSSSS Trigger: GGAAGAACTGGAATGTCCGCAAGGTGATCTACTACA...GCTGAAGAAGCAATTCTTAACAGTAATTTTCTGCAGAATCCTCAATAGCTTCTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049706.11 ENSMUST00000193017.2 |
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| CDS-3UTR TCA 90 bp | CCTTTGACAGTGGAGAAGCTATTGAGGATTCTGCAGAAAATTACTGTTAAGAATTCTCCAAGACTGATTTaGACTGTTCTTCGGTTGAGA | + |
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Preference number: 4 (lower is better) Translates to: PLTVEKLLRILQKITVKNSPRLI*TVLRLR Trigger: TCTCAACCGAAGAACAGTTCAAATCAGTCTTGGAGA...ATTCTTAACAGTAATTTTCTGCAGAATCCTCAATAGCTTCTCCACTGTCAAAGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049706.11 ENSMUST00000193017.2 |
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| CDS-3UTR TCA 90 bp | TGGCCTTTGACAGTGGAGAAGCTATTGAGGATTCTGCAGAAAATTACTGTTAAGTATTTTCCAGTCTTCTaGATCTCCAAGACTGATTTG | + |
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Preference number: 4 (lower is better) Translates to: WPLTVEKLLRILQKITVKYFPVF*ISKTDL Trigger: CAAATCAGTCTTGGAGATTCAGAAGACTGGAAAATA...CTTAACAGTAATTTTCTGCAGAATCCTCAATAGCTTCTCCACTGTCAAAGGCCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049706.11 ENSMUST00000193017.2 |
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| CDS-3UTR CCA 90 bp | GCTGCAGTTGGTTTAATGAAGCATTTATGCAATTCCTGTGGAACAGACTTTTCTAAATATTCTAATCCATaGTGGGTCCAAGGTCAGTAC | + |
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Preference number: 4 (lower is better) Translates to: AAVGLMKHLCNSCGTDFSKYSNP*WVQGQY Trigger: GTACTGACCTTGGACCCACCATGGATTAGAATATTT...AGAAAAGTCTGTTCCACAGGAATTGCATAAATGCTTCATTAAACCAACTGCAGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049706.11 |
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| CDS-3UTR TCA 90 bp | GAGAAGCTATTGAGGATTCTGCAGAAAATTACTGTTAAGAATTGCTTCTTCAGCTATTTTCCAGTCTTCTaGATCTCCAAGACTGATTTG | + |
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Preference number: 4 (lower is better) Translates to: EKLLRILQKITVKNCFFSYFPVF*ISKTDL Trigger: CAAATCAGTCTTGGAGATTCAGAAGACTGGAAAATA...GCTGAAGAAGCAATTCTTAACAGTAATTTTCTGCAGAATCCTCAATAGCTTCTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049706.11 ENSMUST00000193017.2 |
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| CDS TCA 90 bp | AGTAGATCACCTTGCGGACATTCCAGTTCTTCCAGCCATGGCATCTaGTGTCAAAGGATCCATGGACTAAGACCATGTCAGCAGATGTCT | + |
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Preference number: 5 (lower is better) Translates to: SRSPCGHSSSSSHGI*CQRIHGLRPCQQMS Trigger: AGACATCTGCTGACATGGTCTTAGTCCATGGATCCTTTGACATCAGATGCCATGGCTGGAAGAACTGGAATGTCCGCAAGGTGATCTACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049706.11 ENSMUST00000193017.2 |
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| CDS CCA 90 bp | GCAGGAAAGGGTCACTTTCTCTCCTGTAAATATTCTAATCCATGGTaGGTCCAAGGTCAGTACAGATTTCTCAGTGGCTGTCAGAATGAC | + |
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Preference number: 5 (lower is better) Translates to: AGKGHFLSCKYSNPW*VQGQYRFLSGCQND Trigger: GTCATTCTGACAGCCACTGAGAAATCTGTACTGACCTTGGACCCACCATGGATTAGAATATTTACAGGAGAGAAAGTGACCCTTTCCTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049706.11 |
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| CDS TCA 90 bp | TCTGACATATGTATTTTCCACTGTCTTGAACGGTGGCACTCACAATaGCCAAATGTGAAGAGTTCACCTCAGAGACGGTACCATTGTGGA | + |
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Preference number: 5 (lower is better) Translates to: SDICIFHCLERWHSQ*PNVKSSPQRRYHCG Trigger: TCCACAATGGTACCGTCTCTGAGGTGAACTCTTCACATTTGGTCATTGTGAGTGCCACCGTTCAAGACAGTGGAAAATACATATGTCAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049706.11 ENSMUST00000193017.2 |
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| CDS CCA 90 bp | ATAGCAGGAAAGGGTCACTTTCTCTCCTGTAAATATTCTAATCCATaGTGGGTCCAAGGTCAGTACAGATTTCTCAGTGGCTGTCAGAAT | + |
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Preference number: 5 (lower is better) Translates to: IAGKGHFLSCKYSNP*WVQGQYRFLSGCQN Trigger: ATTCTGACAGCCACTGAGAAATCTGTACTGACCTTGGACCCACCATGGATTAGAATATTTACAGGAGAGAAAGTGACCCTTTCCTGCTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049706.11 |
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| CDS TCA 90 bp | CAACTTTCTTGTATTTTCCAGTCTTCTGAATCTCCAAGACTGATTTaGACTGTTCTTCGGTTGAGAGCAATAACCCCGTGTCCACAGCAA | + |
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Preference number: 5 (lower is better) Translates to: QLSCIFQSSESPRLI*TVLRLRAITPCPQQ Trigger: TTGCTGTGGACACGGGGTTATTGCTCTCAACCGAAGAACAGTTCAAATCAGTCTTGGAGATTCAGAAGACTGGAAAATACAAGAAAGTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049706.11 ENSMUST00000193017.2 |
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| CDS-3UTR CAA 90 bp | CCTTTGACAGTGGAGAAGCTATTGAGGATTCTGCAGAAAATTACTGTTAAGAATAAGGAGCAGCCAATCTaGCGTTACATTCAAGTACAC | + |
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Preference number: 5 (lower is better) Translates to: PLTVEKLLRILQKITVKNKEQPI*RYIQVH Trigger: GTGTACTTGAATGTAACGCAAGATTGGCTGCTCCTT...ATTCTTAACAGTAATTTTCTGCAGAATCCTCAATAGCTTCTCCACTGTCAAAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049706.11 ENSMUST00000193017.2 |
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| CDS TCA 72 bp | ACTGTCTTGAACGGTGGCACTCACAATGACCAAATGTaGAGAGTTCACCTCAGAGACGGTACCATTGTGGAT | + |
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Preference number: 6 (lower is better) Translates to: TVLNGGTHNDQM*RVHLRDGTIVD Trigger: ATCCACAATGGTACCGTCTCTGAGGTGAACTCTTCACATTTGGTCATTGTGAGTGCCACCGTTCAAGACAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049706.11 ENSMUST00000193017.2 |
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| CDS CAA 90 bp | CTCAGAGACGGTACCATTGTGGATCCATTTAGTAGTAGAGTTCATTaGAAGGTGATTGTTCCCATAGCAGGAAAGGGTCACTTTCTCTCC | + |
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Preference number: 6 (lower is better) Translates to: LRDGTIVDPFSSRVH*KVIVPIAGKGHFLS Trigger: GGAGAGAAAGTGACCCTTTCCTGCTATGGGAACAATCACCTTCAAATGAACTCTACTACTAAATGGATCCACAATGGTACCGTCTCTGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049706.11 |
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| CDS CAA 72 bp | GGTACCATTGTGGATCCATTTAGTAGTAGAGTTCATTaGAAGGTGATTGTTCCCATAGCAGGAAAGGGTCAC | + |
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Preference number: 6 (lower is better) Translates to: GTIVDPFSSRVH*KVIVPIAGKGH Trigger: GTGACCCTTTCCTGCTATGGGAACAATCACCTTCAAATGAACTCTACTACTAAATGGATCCACAATGGTACC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049706.11 |
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| CDS CAA 72 bp | GACCATGTCAGCAGATGTCTGAAGGAGCAGCCAATCTaGCGTTACATTCAAGTACACAGGTTTACTCTTAAA | + |
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Preference number: 6 (lower is better) Translates to: DHVSRCLKEQPI*RYIQVHRFTLK Trigger: TTTAAGAGTAAACCTGTGTACTTGAATGTAACGCAAGATTGGCTGCTCCTTCAGACATCTGCTGACATGGTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049706.11 ENSMUST00000193017.2 |
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| CDS TCA 72 bp | TGTATTTTCCAGTCTTCTGAATCTCCAAGACTGATTTaGACTGTTCTTCGGTTGAGAGCAATAACCCCGTGT | + |
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Preference number: 6 (lower is better) Translates to: CIFQSSESPRLI*TVLRLRAITPC Trigger: ACACGGGGTTATTGCTCTCAACCGAAGAACAGTTCAAATCAGTCTTGGAGATTCAGAAGACTGGAAAATACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049706.11 ENSMUST00000193017.2 |
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| CDS CAA 90 bp | ATCTTGCGTTACATTCAAGTACACAGGTTTACTCTTAAACAATCCTaGCTTCTGACATATGTATTTTCCACTGTCTTGAACGGTGGCACT | + |
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Preference number: 6 (lower is better) Translates to: ILRYIQVHRFTLKQS*LLTYVFSTVLNGGT Trigger: AGTGCCACCGTTCAAGACAGTGGAAAATACATATGTCAGAAGCAAGGATTGTTTAAGAGTAAACCTGTGTACTTGAATGTAACGCAAGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049706.11 ENSMUST00000193017.2 |
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| CDS TCA 72 bp | AGTTCGGTTTCAACTTTCTTGTATTTTCCAGTCTTCTaGATCTCCAAGACTGATTTGAACTGTTCTTCGGTT | + |
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Preference number: 6 (lower is better) Translates to: SSVSTFLYFPVF*ISKTDLNCSSV Trigger: AACCGAAGAACAGTTCAAATCAGTCTTGGAGATTCAGAAGACTGGAAAATACAAGAAAGTTGAAACCGAACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049706.11 ENSMUST00000193017.2 |
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| CDS CAA 72 bp | TACATTCAAGTACACAGGTTTACTCTTAAACAATCCTaGCTTCTGACATATGTATTTTCCACTGTCTTGAAC | + |
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Preference number: 6 (lower is better) Translates to: YIQVHRFTLKQS*LLTYVFSTVLN Trigger: GTTCAAGACAGTGGAAAATACATATGTCAGAAGCAAGGATTGTTTAAGAGTAAACCTGTGTACTTGAATGTA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049706.11 ENSMUST00000193017.2 |
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