Pregenerated sensors for FBXW9 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000008167Ensembl transcript IDs: ENSMUST00000095220.4
Found 98 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TTCTCTTCACTGCTGTGGGAGAGAGACATCCAAATCCAAACAAAATaGGTCATTCAGGCATGGTGGCACACCTACCATCCCAACACGTGG | + |
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Preference number: 1 (lower is better) Translates to: FSSLLWERDIQIQTK*VIQAWWHTYHPNTW Trigger: CCACGTGTTGGGATGGTAGGTGTGCCACCATGCCTGAATGACCCATTTTGTTTGGATTTGGATGTCTCTCTCCCACAGCAGTGAAGAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095220.4 |
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| 3UTR-3UTR GCA 90 bp | ATTCAAGGCCTGCCTCAAACACATAGTGAATATGAGGCCAGCCTGGGTTACATGGAGCAGAGGCCTCGGTaGAGCCTCAGCAGGCAGTCT | + |
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Preference number: 2 (lower is better) Translates to: IQGLPQTHSEYEASLGYMEQRPR*SLSRQS Trigger: AGACTGCCTGCTGAGGCTGCACCGAGGCCTCTGCTC...CATGTAACCCAGGCTGGCCTCATATTCACTATGTGTTTGAGGCAGGCCTTGAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095220.4 |
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| 3UTR-3UTR CCA 90 bp | GTGGGAGAGAGACATCCAAATCCAAACAAAATGGGTCATTCAGGCATGGTGGCAGTGTGGGCCCAGCCCTaGGACTTCCTGTATCCCAGG | + |
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Preference number: 2 (lower is better) Translates to: VGERHPNPNKMGHSGMVAVWAQP*DFLYPR Trigger: CCTGGGATACAGGAAGTCCCAGGGCTGGGCCCACAC...TGCCACCATGCCTGAATGACCCATTTTGTTTGGATTTGGATGTCTCTCTCCCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095220.4 |
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| 3UTR-3UTR GCA 90 bp | TCCAAACAAAATGGGTCATTCAGGCATGGTGGCACACCTACCATCCCAACACGTCTAGAATGTCACCCCTaGAGGCACAGTGTGGGCCCA | + |
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Preference number: 2 (lower is better) Translates to: SKQNGSFRHGGTPTIPTRLECHP*RHSVGP Trigger: TGGGCCCACACTGTGCCTGCAGGGGTGACATTCTAG...ACGTGTTGGGATGGTAGGTGTGCCACCATGCCTGAATGACCCATTTTGTTTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095220.4 |
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| 3UTR-3UTR GCA 90 bp | TCATTCAGGCATGGTGGCACACCTACCATCCCAACACGTGGGAGATATAAGCAACAGGCATTCAAGGCCTaGCTCAAACACATAGTGAAT | + |
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Preference number: 2 (lower is better) Translates to: SFRHGGTPTIPTRGRYKQQAFKA*LKHIVN Trigger: ATTCACTATGTGTTTGAGGCAGGCCTTGAATGCCTG...TTGCTTATATCTCCCACGTGTTGGGATGGTAGGTGTGCCACCATGCCTGAATGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095220.4 |
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| 3UTR CCA 72 bp | AATGTCACCCCTGCAGGCACAGTGTGGGCCCAGCCCTaGGACTTCCTGTATCCCAGGTCTGTGGAGCAGGGC | + |
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Preference number: 3 (lower is better) Translates to: NVTPAGTVWAQP*DFLYPRSVEQG Trigger: GCCCTGCTCCACAGACCTGGGATACAGGAAGTCCCAGGGCTGGGCCCACACTGTGCCTGCAGGGGTGACATT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095220.4 |
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| 3UTR GCA 72 bp | CCAATGGCAGGAATTCCTCCAGAGCAGAGGCCTCGGTaGAGCCTCAGCAGGCAGTCTATACCAACATCCATC | + |
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Preference number: 3 (lower is better) Translates to: PMAGIPPEQRPR*SLSRQSIPTSI Trigger: GATGGATGTTGGTATAGACTGCCTGCTGAGGCTGCACCGAGGCCTCTGCTCTGGAGGAATTCCTGCCATTGG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095220.4 |
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| 3UTR GCA 72 bp | GGGAGATATAAGCAAGGGGATCAGGCATTCAAGGCCTaGCTCAAACACATAGTGAATATGAGGCCAGCCTGG | + |
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Preference number: 3 (lower is better) Translates to: GRYKQGDQAFKA*LKHIVNMRPAW Trigger: CCAGGCTGGCCTCATATTCACTATGTGTTTGAGGCAGGCCTTGAATGCCTGATCCCCTTGCTTATATCTCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095220.4 |
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| 3UTR CCA 72 bp | GACATCCAAATCCAAACAAAATGGGTCATTCAGGCATaGTGGCACACCTACCATCCCAACACGTGGGAGATA | + |
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Preference number: 3 (lower is better) Translates to: DIQIQTKWVIQA*WHTYHPNTWEI Trigger: TATCTCCCACGTGTTGGGATGGTAGGTGTGCCACCATGCCTGAATGACCCATTTTGTTTGGATTTGGATGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095220.4 |
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| 3UTR GCA 72 bp | TTTCCAACAATTGCACGTAGGTTTATTTCTCTTCACTaGTGTGGGAGAGAGACATCCAAATCCAAACAAAAT | + |
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Preference number: 3 (lower is better) Translates to: FPTIARRFISLH*CGRETSKSKQN Trigger: ATTTTGTTTGGATTTGGATGTCTCTCTCCCACAGCAGTGAAGAGAAATAAACCTACGTGCAATTGTTGGAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095220.4 |
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| CDS-3UTR TCA 90 bp | GGGCAGCACCAATGGCAGGAATTCCTCCAGAGCAGAGGCCTCGGTGCAGCCTCACGCGTAGCCTCCAGGTaGCACGATCACGCACGAGGT | + |
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Preference number: 4 (lower is better) Translates to: GQHQWQEFLQSRGLGAASRVASR*HDHARG Trigger: ACCTCGTGCGTGATCGTGTCACCTGGAGGCTACGCG...TGAGGCTGCACCGAGGCCTCTGCTCTGGAGGAATTCCTGCCATTGGTGCTGCCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095220.4 |
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| CDS-3UTR TCA 90 bp | AGCAGGGCAGCACCAATGGCAGGAATTCCTCCAGAGCAGAGGCCTCGGTGCAGCGCAGGTCCCACAGGTTaGCATTCCGATCCCGGGAGC | + |
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Preference number: 4 (lower is better) Translates to: SRAAPMAGIPPEQRPRCSAGPTG*HSDPGS Trigger: GCTCCCGGGATCGGAATGTCAACCTGTGGGACCTGC...GCTGCACCGAGGCCTCTGCTCTGGAGGAATTCCTGCCATTGGTGCTGCCCTGCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095220.4 |
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| CDS-3UTR GCA 90 bp | GAGCAGGGCAGCACCAATGGCAGGAATTCCTCCAGAGCAGAGGCCTCGGTGCAGCCCACAGCTTCACAGTaGTGTCCCAAGAGCCGGAGC | + |
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Preference number: 4 (lower is better) Translates to: EQGSTNGRNSSRAEASVQPTASQ*CPKSRS Trigger: GCTCCGGCTCTTGGGACAGCACTGTGAAGCTGTGGG...CTGCACCGAGGCCTCTGCTCTGGAGGAATTCCTGCCATTGGTGCTGCCCTGCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095220.4 |
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| CDS-3UTR CCA 90 bp | GAGCAGAGGCCTCGGTGCAGCCTCAGCAGGCAGTCTATACCAACATCCATCCACCCGGAGCACACACGGTaGTCCTGCGCTGCTAGCGAC | + |
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Preference number: 4 (lower is better) Translates to: EQRPRCSLSRQSIPTSIHPEHTR*SCAASD Trigger: GTCGCTAGCAGCGCAGGACCACCGTGTGTGCTCCGG...GTGGATGGATGTTGGTATAGACTGCCTGCTGAGGCTGCACCGAGGCCTCTGCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095220.4 |
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| CDS-3UTR TCA 90 bp | AGGGCAGCACCAATGGCAGGAATTCCTCCAGAGCAGAGGCCTCGGTGCAGCCTCGTGGTCCTCGCTGCCTaGGATGACATGCCTGTCATC | + |
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Preference number: 4 (lower is better) Translates to: RAAPMAGIPPEQRPRCSLVVLAA*DDMPVI Trigger: GATGACAGGCATGTCATCTCAGGCAGCGAGGACCAC...GAGGCTGCACCGAGGCCTCTGCTCTGGAGGAATTCCTGCCATTGGTGCTGCCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095220.4 |
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| CDS-3UTR GCA 90 bp | GGGACTTCCTGTATCCCAGGTCTGTGGAGCAGGGCAGCACCAATGGCAGGAATTCAGCGGGCCAGGTGCTaGTCCAGCTCAATGCAGGCG | + |
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Preference number: 4 (lower is better) Translates to: GTSCIPGLWSRAAPMAGIQRARC*SSSMQA Trigger: CGCCTGCATTGAGCTGGAGCAGCACCTGGCCCGCTG...AATTCCTGCCATTGGTGCTGCCCTGCTCCACAGACCTGGGATACAGGAAGTCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095220.4 |
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| CDS-3UTR CCA 90 bp | TGTATCCCAGGTCTGTGGAGCAGGGCAGCACCAATGGCAGGAATTCCTCCAGAGCTCCTCTTCCACCACTaGGTAGGGTGCGCGTACGCG | + |
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Preference number: 4 (lower is better) Translates to: CIPGLWSRAAPMAGIPPELLFHH*VGCAYA Trigger: CGCGTACGCGCACCCTACCCAGTGGTGGAAGAGGAG...CTCTGGAGGAATTCCTGCCATTGGTGCTGCCCTGCTCCACAGACCTGGGATACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095220.4 |
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| CDS-3UTR TCA 90 bp | GTAGGGAAGAACCCTCTTGGTAGGAAAACTAGAATGTCACCCCTGCAGGCACAGCCGATCCCGGGAGCCTaGCAGACACAGTGCCCCACC | + |
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Preference number: 4 (lower is better) Translates to: VGKNPLGRKTRMSPLQAQPIPGA*QTQCPT Trigger: GGTGGGGCACTGTGTCTGTCAGGCTCCCGGGATCGG...CTGTGCCTGCAGGGGTGACATTCTAGTTTTCCTACCAAGAGGGTTCTTCCCTAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000095220.4 |
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| CDS-3UTR TCA 90 bp | TTCACTGCTGTGGGAGAGAGACATCCAAATCCAAACAAAATGGGTCATTCAGGCGCGCGTACGCGGCGCTaGGCGCGTAGCCTCCAGGTG | + |
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Preference number: 4 (lower is better) Translates to: FTAVGERHPNPNKMGHSGARTRR*ARSLQV Trigger: CACCTGGAGGCTACGCGCTCAGCGCCGCGTACGCGC...GCCTGAATGACCCATTTTGTTTGGATTTGGATGTCTCTCTCCCACAGCAGTGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095220.4 |
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| CDS-3UTR GCA 90 bp | CCTCAAACACATAGTGAATATGAGGCCAGCCTGGGTTACATGAGACCCTGTCTCCACCACTGGGTAGGGTaGGCGTACGCGGCGCTGAGC | + |
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Preference number: 4 (lower is better) Translates to: PQTHSEYEASLGYMRPCLHHWVG*AYAALS Trigger: GCTCAGCGCCGCGTACGCGCACCCTACCCAGTGGTG...GAGACAGGGTCTCATGTAACCCAGGCTGGCCTCATATTCACTATGTGTTTGAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095220.4 |
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| CDS-3UTR GCA 90 bp | CAGGAATTCCTCCAGAGCAGAGGCCTCGGTGCAGCCTCAGCAGGCAGTCTATACCAGCCACCACTACGTTaGCCTCAGCACAGATCCCAT | + |
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Preference number: 4 (lower is better) Translates to: QEFLQSRGLGAASAGSLYQPPLR*PQHRSH Trigger: ATGGGATCTGTGCTGAGGGCAACGTAGTGGTGGCTG...GTATAGACTGCCTGCTGAGGCTGCACCGAGGCCTCTGCTCTGGAGGAATTCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095220.4 |
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| CDS-3UTR CCA 90 bp | TGTGGAGCAGGGCAGCACCAATGGCAGGAATTCCTCCAGAGCAGAGGCCTCGGTAGCAACCATCTCGATTaGCGAAGACGTGCAGCAGAC | + |
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Preference number: 4 (lower is better) Translates to: CGAGQHQWQEFLQSRGLGSNHLD*RRRAAD Trigger: GTCTGCTGCACGTCTTCGCCAATCGAGATGGTTGCT...ACCGAGGCCTCTGCTCTGGAGGAATTCCTGCCATTGGTGCTGCCCTGCTCCACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095220.4 |
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| CDS-3UTR TCA 90 bp | GGTCATTCAGGCATGGTGGCACACCTACCATCCCAACACGTGGGAGATATAAGCCTGCCGCCTTGCCCTTaGTCTCTCCAAACTGCTGCC | + |
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Preference number: 4 (lower is better) Translates to: GHSGMVAHLPSQHVGDISLPPCP*SLQTAA Trigger: GGCAGCAGTTTGGAGAGATCAAGGGCAAGGCGGCAG...GCTTATATCTCCCACGTGTTGGGATGGTAGGTGTGCCACCATGCCTGAATGACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095220.4 |
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| CDS-3UTR TCA 90 bp | GTAGGGAAGAACCCTCTTGGTAGGAAAACTAGAATGTCACCCCTGCAGGCACAGCCTCCAGACCTCCAATaGCAGGCCACCAGAGGCAGC | + |
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Preference number: 4 (lower is better) Translates to: VGKNPLGRKTRMSPLQAQPPDLQ*QATRGS Trigger: GCTGCCTCTGGTGGCCTGTCATTGGAGGTCTGGAGG...CTGTGCCTGCAGGGGTGACATTCTAGTTTTCCTACCAAGAGGGTTCTTCCCTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095220.4 |
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| CDS-3UTR GCA 90 bp | TGTATCCCAGGTCTGTGGAGCAGGGCAGCACCAATGGCAGGAATTCCTCCAGAGATCTCTCCAAACTGCTaGCCATCAGCCGCCATGTCC | + |
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Preference number: 4 (lower is better) Translates to: CIPGLWSRAAPMAGIPPEISPNC*PSAAMS Trigger: GGACATGGCGGCTGATGGGCAGCAGTTTGGAGAGAT...CTCTGGAGGAATTCCTGCCATTGGTGCTGCCCTGCTCCACAGACCTGGGATACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095220.4 |
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| CDS-3UTR GCA 90 bp | AGAGCAGAGGCCTCGGTGCAGCCTCAGCAGGCAGTCTATACCAACATCCATCCACGATTGGCGAAGACGTaGAGCAGACCCTGGTTGTCA | + |
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Preference number: 4 (lower is better) Translates to: RAEASVQPQQAVYTNIHPRLAKT*SRPWLS Trigger: TGACAACCAGGGTCTGCTGCACGTCTTCGCCAATCG...TGGATGGATGTTGGTATAGACTGCCTGCTGAGGCTGCACCGAGGCCTCTGCTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095220.4 |
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| CDS-3UTR CCA 90 bp | AGAGCAGAGGCCTCGGTGCAGCCTCAGCAGGCAGTCTATACCAACATCCATCCAAATACCACAAGGCTGTaGTCCTCGCTGCCTGAGATG | + |
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Preference number: 4 (lower is better) Translates to: RAEASVQPQQAVYTNIHPNTTRL*SSLPEM Trigger: CATCTCAGGCAGCGAGGACCACAGCCTTGTGGTATT...TGGATGGATGTTGGTATAGACTGCCTGCTGAGGCTGCACCGAGGCCTCTGCTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095220.4 |
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| CDS-3UTR CCA 90 bp | TCAGGCATTCAAGGCCTGCCTCAAACACATAGTGAATATGAGGCCAGCCTGGGTACGTGCAGCAGACCCTaGTTGTCACCTGCCCAGAGC | + |
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Preference number: 4 (lower is better) Translates to: SGIQGLPQTHSEYEASLGTCSRP*LSPAQS Trigger: GCTCTGGGCAGGTGACAACCAGGGTCTGCTGCACGT...ACCCAGGCTGGCCTCATATTCACTATGTGTTTGAGGCAGGCCTTGAATGCCTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095220.4 |
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| CDS-3UTR CCA 90 bp | GGGACTTCCTGTATCCCAGGTCTGTGGAGCAGGGCAGCACCAATGGCAGGAATTGCAACACCGCATCAATaGAAGCAAAGTGGCCATCAG | + |
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Preference number: 4 (lower is better) Translates to: GTSCIPGLWSRAAPMAGIATPHQ*KQSGHQ Trigger: CTGATGGCCACTTTGCTTCCATTGATGCGGTGTTGC...AATTCCTGCCATTGGTGCTGCCCTGCTCCACAGACCTGGGATACAGGAAGTCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095220.4 |
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| CDS-3UTR CCA 90 bp | ATTCAAGGCCTGCCTCAAACACATAGTGAATATGAGGCCAGCCTGGGTTACATGCACAGTGCCCCACCCTaGAGCAGCAACACCGCATCA | + |
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Preference number: 4 (lower is better) Translates to: IQGLPQTHSEYEASLGYMHSAPP*SSNTAS Trigger: TGATGCGGTGTTGCTGCTCCAGGGTGGGGCACTGTG...CATGTAACCCAGGCTGGCCTCATATTCACTATGTGTTTGAGGCAGGCCTTGAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095220.4 |
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| CDS-3UTR TCA 90 bp | GTGGGAGAGAGACATCCAAATCCAAACAAAATGGGTCATTCAGGCATGGTGGCACCTCGCTGCCTGAGATaGCATGCCTGTCATCTGCCA | + |
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Preference number: 4 (lower is better) Translates to: VGERHPNPNKMGHSGMVAPRCLR*HACHLP Trigger: TGGCAGATGACAGGCATGTCATCTCAGGCAGCGAGG...TGCCACCATGCCTGAATGACCCATTTTGTTTGGATTTGGATGTCTCTCTCCCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095220.4 |
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| CDS-3UTR CCA 90 bp | GGTCATTCAGGCATGGTGGCACACCTACCATCCCAACACGTGGGAGATATAAGCTCAATGGAAGCAAAGTaGCCATCAGCCAGGCAGAAG | + |
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Preference number: 4 (lower is better) Translates to: GHSGMVAHLPSQHVGDISSMEAK*PSARQK Trigger: CTTCTGCCTGGCTGATGGCCACTTTGCTTCCATTGA...GCTTATATCTCCCACGTGTTGGGATGGTAGGTGTGCCACCATGCCTGAATGACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095220.4 |
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| CDS-3UTR GCA 90 bp | TCATTCAGGCATGGTGGCACACCTACCATCCCAACACGTGGGAGATATAAGCAATTGATCTCTCCAAACTaGTGCCCATCAGCCGCCATG | + |
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Preference number: 4 (lower is better) Translates to: SFRHGGTPTIPTRGRYKQLISPN*CPSAAM Trigger: CATGGCGGCTGATGGGCAGCAGTTTGGAGAGATCAA...TTGCTTATATCTCCCACGTGTTGGGATGGTAGGTGTGCCACCATGCCTGAATGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095220.4 |
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| CDS-3UTR GCA 90 bp | ATTCAAGGCCTGCCTCAAACACATAGTGAATATGAGGCCAGCCTGGGTTACATGCTGCCTGAGATGACATaGCTGTCATCTGCCAGCACT | + |
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Preference number: 4 (lower is better) Translates to: IQGLPQTHSEYEASLGYMLPEMT*LSSAST Trigger: AGTGCTGGCAGATGACAGGCATGTCATCTCAGGCAG...CATGTAACCCAGGCTGGCCTCATATTCACTATGTGTTTGAGGCAGGCCTTGAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095220.4 |
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| CDS-3UTR CCA 90 bp | GCTGTGGGAGAGAGACATCCAAATCCAAACAAAATGGGTCATTCAGGCATGGTGACAGATGGTCCTAGGTaGATCTGTGGGCACGTGAAC | + |
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Preference number: 4 (lower is better) Translates to: AVGERHPNPNKMGHSGMVTDGPR*ICGHVN Trigger: GTTCACGTGCCCACAGATCCACCTAGGACCATCTGT...CACCATGCCTGAATGACCCATTTTGTTTGGATTTGGATGTCTCTCTCCCACAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095220.4 |
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| CDS-3UTR GCA 90 bp | GTAGGTTTATTTCTCTTCACTGCTGTGGGAGAGAGACATCCAAATCCAAACAAAGCTGCTCCAGCTCAATaGAGGCGGCTGGCCAGTCAA | + |
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Preference number: 4 (lower is better) Translates to: VGLFLFTAVGERHPNPNKAAPAQ*RRLASQ Trigger: TTGACTGGCCAGCCGCCTGCATTGAGCTGGAGCAGC...TTTGTTTGGATTTGGATGTCTCTCTCCCACAGCAGTGAAGAGAAATAAACCTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095220.4 |
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| CDS-3UTR CCA 90 bp | GTAGGGAAGAACCCTCTTGGTAGGAAAACTAGAATGTCACCCCTGCAGGCACAGCTCTGGGATCATAGATaGTCACCTTCTTGTCATAGG | + |
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Preference number: 4 (lower is better) Translates to: VGKNPLGRKTRMSPLQAQLWDHR*SPSCHR Trigger: CCTATGACAAGAAGGTGACCATCTATGATCCCAGAG...CTGTGCCTGCAGGGGTGACATTCTAGTTTTCCTACCAAGAGGGTTCTTCCCTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095220.4 |
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| CDS-3UTR CCA 90 bp | AGGTTTATTTCTCTTCACTGCTGTGGGAGAGAGACATCCAAATCCAAACAAAATCTCAATGCAGGCGGCTaGCCAGTCAAAGTTCTCCTC | + |
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Preference number: 4 (lower is better) Translates to: RFISLHCCGRETSKSKQNLNAGG*PVKVLL Trigger: GAGGAGAACTTTGACTGGCCAGCCGCCTGCATTGAG...ATTTTGTTTGGATTTGGATGTCTCTCTCCCACAGCAGTGAAGAGAAATAAACCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095220.4 |
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| CDS-3UTR CCA 90 bp | GTAGGTTTATTTCTCTTCACTGCTGTGGGAGAGAGACATCCAAATCCAAACAAAGGGCCAAACCAGCTCTaGGATCATAGATGGTCACCT | + |
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Preference number: 4 (lower is better) Translates to: VGLFLFTAVGERHPNPNKGPNQL*DHRWSP Trigger: AGGTGACCATCTATGATCCCAGAGCTGGTTTGGCCC...TTTGTTTGGATTTGGATGTCTCTCTCCCACAGCAGTGAAGAGAAATAAACCTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095220.4 |
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| CDS CCA 90 bp | CCGGGGGAAGGCTCAAGAGGCCCGGTAGGCGCACGGCCGGGACTTTaGAGGCGGCCTTTCGCTCCGGCACGCCTAGGGACGCGGAGAACA | + |
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Preference number: 5 (lower is better) Translates to: PGEGSRGPVGARPGL*RRPFAPARLGTRRT Trigger: TGTTCTCCGCGTCCCTAGGCGTGCCGGAGCGAAAGGCCGCCTCCAAAGTCCCGGCCGTGCGCCTACCGGGCCTCTTGAGCCTTCCCCCGG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095220.4 |
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| CDS TCA 90 bp | CTGGGTAGGGTGCGCGTACGCGGCGCTGAGCGCGTAGCCTCCAGGTaGCACGATCACGCACGAGGTCGTGCAACGCTTGGCACACGCACG | + |
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Preference number: 5 (lower is better) Translates to: LGRVRVRGAERVASR*HDHARGRATLGTRT Trigger: CGTGCGTGTGCCAAGCGTTGCACGACCTCGTGCGTGATCGTGTCACCTGGAGGCTACGCGCTCAGCGCCGCGTACGCGCACCCTACCCAG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095220.4 |
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| CDS-3UTR CAA 90 bp | GGCACAGTGTGGGCCCAGCCCTGGGACTTCCTGTATCCCAGGTCTGTGGAGCAGGGGGTCAGGCCAAGCTaGGGAGGGGTAAGCACACGG | + |
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Preference number: 5 (lower is better) Translates to: GTVWAQPWDFLYPRSVEQGVRPS*GGVSTR Trigger: CCGTGTGCTTACCCCTCCCAAGCTTGGCCTGACCCC...CTGCTCCACAGACCTGGGATACAGGAAGTCCCAGGGCTGGGCCCACACTGTGCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095220.4 |
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| CDS GCA 90 bp | GCTGTCCATCCTCTGCCCAGCGGGCCAGGTGCTGCTCCAGCTCAATaGAGGCGGCTGGCCAGTCAAAGTTCTCCTCTTCCACCACTGGGT | + |
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Preference number: 5 (lower is better) Translates to: AVHPLPSGPGAAPAQ*RRLASQSSPLPPLG Trigger: ACCCAGTGGTGGAAGAGGAGAACTTTGACTGGCCAGCCGCCTGCATTGAGCTGGAGCAGCACCTGGCCCGCTGGGCAGAGGATGGACAGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095220.4 |
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| CDS-3UTR CAA 90 bp | GAGCAGGGCAGCACCAATGGCAGGAATTCCTCCAGAGCAGAGGCCTCGGTGCAGCGCAGGTCCCACAGGTaGACATTCCGATCCCGGGAG | + |
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Preference number: 5 (lower is better) Translates to: EQGSTNGRNSSRAEASVQRRSHR*TFRSRE Trigger: CTCCCGGGATCGGAATGTCAACCTGTGGGACCTGCG...CTGCACCGAGGCCTCTGCTCTGGAGGAATTCCTGCCATTGGTGCTGCCCTGCTC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095220.4 |
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| CDS-3UTR CAA 90 bp | ACAGTGTGGGCCCAGCCCTGGGACTTCCTGTATCCCAGGTCTGTGGAGCAGGGCCCCTTGTGTGTGCTATaGCCCTGGGTGCCTAAGGCC | + |
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Preference number: 5 (lower is better) Translates to: TVWAQPWDFLYPRSVEQGPLCVL*PWVPKA Trigger: GGCCTTAGGCACCCAGGGCAATAGCACACACAAGGG...GCCCTGCTCCACAGACCTGGGATACAGGAAGTCCCAGGGCTGGGCCCACACTGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095220.4 |
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| CDS-3UTR CAA 90 bp | GGCCTCGGTGCAGCCTCAGCAGGCAGTCTATACCAACATCCATCCACAGCCGCGTGCAGCAGACCCTGGTaGTCACCTGCCCAGAGCTGG | + |
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Preference number: 5 (lower is better) Translates to: GLGAASAGSLYQHPSTAACSRPW*SPAQSW Trigger: CCAGCTCTGGGCAGGTGACAACCAGGGTCTGCTGCA...CGCGGCTGTGGATGGATGTTGGTATAGACTGCCTGCTGAGGCTGCACCGAGGCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095220.4 |
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| CDS TCA 90 bp | GAACTCGGCTGGGATCCTTCCCTAGATGGCGCAGGTCCCACAGGTTaGCATTCCGATCCCGGGAGCCTGACAGACACAGTGCCCCACCCT | + |
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Preference number: 5 (lower is better) Translates to: ELGWDPSLDGAGPTG*HSDPGSLTDTVPHP Trigger: AGGGTGGGGCACTGTGTCTGTCAGGCTCCCGGGATCGGAATGTCAACCTGTGGGACCTGCGCCATCTAGGGAAGGATCCCAGCCGAGTTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095220.4 |
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| CDS GCA 90 bp | CAGAAGTACTCGGTTCGCTGTCCATCCTCTGCCCAGCGGGCCAGGTaGTGCTCCAGCTCAATGCAGGCGGCTGGCCAGTCAAAGTTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: QKYSVRCPSSAQRAR*CSSSMQAAGQSKFS Trigger: GGAGAACTTTGACTGGCCAGCCGCCTGCATTGAGCTGGAGCAGCACCTGGCCCGCTGGGCAGAGGATGGACAGCGAACCGAGTACTTCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095220.4 |
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| CDS GCA 90 bp | CACGGTGGTCCTGCGCTGCTAGCGACCATACCCAGCCCTTGTGTGTaGTATTGCCCTGGGTGCCTAAGGCCTTCACCAGAACTCGGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: HGGPALLATIPSPCV*YCPGCLRPSPELGW Trigger: CCAGCCGAGTTCTGGTGAAGGCCTTAGGCACCCAGGGCAATAGCACACACAAGGGCTGGGTATGGTCGCTAGCAGCGCAGGACCACCGTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095220.4 |
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| CDS GCA 90 bp | CTCCAAACTGCTGCCCATCAGCCGCCATGTCCCACAGCTTCACAGTaGTGTCCCAAGAGCCGGAGCACACACGGTGGTCCTGCGCTGCTA | + |
|
Preference number: 5 (lower is better) Translates to: LQTAAHQPPCPTASQ*CPKSRSTHGGPALL Trigger: TAGCAGCGCAGGACCACCGTGTGTGCTCCGGCTCTTGGGACAGCACTGTGAAGCTGTGGGACATGGCGGCTGATGGGCAGCAGTTTGGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095220.4 |
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| CDS GCA 90 bp | GGTCCTGCGCTGCTAGCGACCATACCCAGCCCTTGTGTGTGCTATTaGCCTGGGTGCCTAAGGCCTTCACCAGAACTCGGCTGGGATCCT | + |
|
Preference number: 5 (lower is better) Translates to: GPALLATIPSPCVCY*PGCLRPSPELGWDP Trigger: AGGATCCCAGCCGAGTTCTGGTGAAGGCCTTAGGCACCCAGGGCAATAGCACACACAAGGGCTGGGTATGGTCGCTAGCAGCGCAGGACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095220.4 |
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| CDS GCA 90 bp | AGCTTCACAGTGCTGTCCCAAGAGCCGGAGCACACACGGTGGTCCTaGGCTGCTAGCGACCATACCCAGCCCTTGTGTGTGCTATTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: SFTVLSQEPEHTRWS*AASDHTQPLCVLLP Trigger: GGGCAATAGCACACACAAGGGCTGGGTATGGTCGCTAGCAGCGCAGGACCACCGTGTGTGCTCCGGCTCTTGGGACAGCACTGTGAAGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095220.4 |
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| CDS CCA 90 bp | GTGCCTAAGGCCTTCACCAGAACTCGGCTGGGATCCTTCCCTAGATaGCGCAGGTCCCACAGGTTGACATTCCGATCCCGGGAGCCTGAC | + |
|
Preference number: 5 (lower is better) Translates to: VPKAFTRTRLGSFPR*RRSHRLTFRSREPD Trigger: GTCAGGCTCCCGGGATCGGAATGTCAACCTGTGGGACCTGCGCCATCTAGGGAAGGATCCCAGCCGAGTTCTGGTGAAGGCCTTAGGCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095220.4 |
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| CDS GCA 90 bp | GACCCTGGTTGTCACCTGCCCAGAGCTGGGGCTCCTGGTAAGACATaGACAGGAGATAGGAGTCCAGCTGCAGCCGCTGTAGGACGCTAT | + |
|
Preference number: 5 (lower is better) Translates to: DPGCHLPRAGAPGKT*TGDRSPAAAAVGRY Trigger: ATAGCGTCCTACAGCGGCTGCAGCTGGACTCCTATCTCCTGTGCATGTCTTACCAGGAGCCCCAGCTCTGGGCAGGTGACAACCAGGGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095220.4 |
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| CDS GCA 90 bp | AAGGACCGAACAAGCTGGAAGCAACCATCTCGATTGGCGAAGACGTaGAGCAGACCCTGGTTGTCACCTGCCCAGAGCTGGGGCTCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: KDRTSWKQPSRLAKT*SRPWLSPAQSWGSW Trigger: CCAGGAGCCCCAGCTCTGGGCAGGTGACAACCAGGGTCTGCTGCACGTCTTCGCCAATCGAGATGGTTGCTTCCAGCTTGTTCGGTCCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095220.4 |
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| CDS GCA 90 bp | GAAAGGCACAGCACTGCCGCCTTGCCCTTGATCTCTCCAAACTGCTaGCCATCAGCCGCCATGTCCCACAGCTTCACAGTGCTGTCCCAA | + |
|
Preference number: 5 (lower is better) Translates to: ERHSTAALPLISPNC*PSAAMSHSFTVLSQ Trigger: TTGGGACAGCACTGTGAAGCTGTGGGACATGGCGGCTGATGGGCAGCAGTTTGGAGAGATCAAGGGCAAGGCGGCAGTGCTGTGCCTTTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095220.4 |
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| CDS CCA 90 bp | TTGACATTCCGATCCCGGGAGCCTGACAGACACAGTGCCCCACCCTaGAGCAGCAACACCGCATCAATGGAAGCAAAGTGGCCATCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: LTFRSREPDRHSAPP*SSNTASMEAKWPSA Trigger: GGCTGATGGCCACTTTGCTTCCATTGATGCGGTGTTGCTGCTCCAGGGTGGGGCACTGTGTCTGTCAGGCTCCCGGGATCGGAATGTCAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095220.4 |
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| CDS GCA 90 bp | CGATCAAATACCACAAGGCTGTGGTCCTCGCTGCCTGAGATGACATaGCTGTCATCTGCCAGCACTGCTAGCACCGCGCTTGAGTGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: RSNTTRLWSSLPEMT*LSSASTASTALECS Trigger: GCTGCACTCAAGCGCGGTGCTAGCAGTGCTGGCAGATGACAGGCATGTCATCTCAGGCAGCGAGGACCACAGCCTTGTGGTATTTGATCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095220.4 |
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| CDS CCA 90 bp | AGTGCCCCACCCTGGAGCAGCAACACCGCATCAATGGAAGCAAAGTaGCCATCAGCCAGGCAGAAGTACTCGGTTCGCTGTCCATCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: SAPPWSSNTASMEAK*PSARQKYSVRCPSS Trigger: AGAGGATGGACAGCGAACCGAGTACTTCTGCCTGGCTGATGGCCACTTTGCTTCCATTGATGCGGTGTTGCTGCTCCAGGGTGGGGCACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095220.4 |
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| CDS CCA 90 bp | TGCACAGGAGATAGGAGTCCAGCTGCAGCCGCTGTAGGACGCTATTaGCTCGACGATCAAATACCACAAGGCTGTGGTCCTCGCTGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: CTGDRSPAAAAVGRY*LDDQIPQGCGPRCL Trigger: CAGGCAGCGAGGACCACAGCCTTGTGGTATTTGATCGTCGAGCCAATAGCGTCCTACAGCGGCTGCAGCTGGACTCCTATCTCCTGTGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095220.4 |
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| CDS TCA 90 bp | CTCGACGATCAAATACCACAAGGCTGTGGTCCTCGCTGCCTGAGATaGCATGCCTGTCATCTGCCAGCACTGCTAGCACCGCGCTTGAGT | + |
|
Preference number: 5 (lower is better) Translates to: LDDQIPQGCGPRCLR*HACHLPALLAPRLS Trigger: ACTCAAGCGCGGTGCTAGCAGTGCTGGCAGATGACAGGCATGTCATCTCAGGCAGCGAGGACCACAGCCTTGTGGTATTTGATCGTCGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095220.4 |
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| CDS CCA 90 bp | GACCCACATCAAAGGACCGAACAAGCTGGAAGCAACCATCTCGATTaGCGAAGACGTGCAGCAGACCCTGGTTGTCACCTGCCCAGAGCT | + |
|
Preference number: 5 (lower is better) Translates to: DPHQRTEQAGSNHLD*RRRAADPGCHLPRA Trigger: AGCTCTGGGCAGGTGACAACCAGGGTCTGCTGCACGTCTTCGCCAATCGAGATGGTTGCTTCCAGCTTGTTCGGTCCTTTGATGTGGGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095220.4 |
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| CDS-3UTR CAA 90 bp | GAGCAGAGGCCTCGGTGCAGCCTCAGCAGGCAGTCTATACCAACATCCATCCACCACCAGGATATCAGGTaGGTAGGAAAGGCACAGCAC | + |
|
Preference number: 5 (lower is better) Translates to: EQRPRCSLSRQSIPTSIHHQDIR*VGKAQH Trigger: GTGCTGTGCCTTTCCTACCAACCTGATATCCTGGTG...GTGGATGGATGTTGGTATAGACTGCCTGCTGAGGCTGCACCGAGGCCTCTGCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095220.4 |
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| CDS CCA 90 bp | CGCTGTAGGACGCTATTGGCTCGACGATCAAATACCACAAGGCTGTaGTCCTCGCTGCCTGAGATGACATGCCTGTCATCTGCCAGCACT | + |
|
Preference number: 5 (lower is better) Translates to: RCRTLLARRSNTTRL*SSLPEMTCLSSAST Trigger: AGTGCTGGCAGATGACAGGCATGTCATCTCAGGCAGCGAGGACCACAGCCTTGTGGTATTTGATCGTCGAGCCAATAGCGTCCTACAGCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095220.4 |
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| CDS-3UTR CAA 90 bp | CTTGGTAGGAAAACTAGAATGTCACCCCTGCAGGCACAGTGTGGGCCCAGCCCTAAGCAACCATCTCGATaGGCGAAGACGTGCAGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: LGRKTRMSPLQAQCGPSPKQPSR*AKTCSR Trigger: TCTGCTGCACGTCTTCGCCAATCGAGATGGTTGCTT...AGGGCTGGGCCCACACTGTGCCTGCAGGGGTGACATTCTAGTTTTCCTACCAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095220.4 |
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| CDS-3UTR CAA 90 bp | GTAGGGAAGAACCCTCTTGGTAGGAAAACTAGAATGTCACCCCTGCAGGCACAGGACCATACCCAGCCCTaGTGTGTGCTATTGCCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: VGKNPLGRKTRMSPLQAQDHTQP*CVLLPW Trigger: CCAGGGCAATAGCACACACAAGGGCTGGGTATGGTC...CTGTGCCTGCAGGGGTGACATTCTAGTTTTCCTACCAAGAGGGTTCTTCCCTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095220.4 |
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| CDS-3UTR CAA 90 bp | ATCCAAACAAAATGGGTCATTCAGGCATGGTGGCACACCTACCATCCCAACACGGCAGCCACCACTACGTaGCCCTCAGCACAGATCCCA | + |
|
Preference number: 5 (lower is better) Translates to: IQTKWVIQAWWHTYHPNTAATTT*PSAQIP Trigger: TGGGATCTGTGCTGAGGGCAACGTAGTGGTGGCTGC...CGTGTTGGGATGGTAGGTGTGCCACCATGCCTGAATGACCCATTTTGTTTGGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095220.4 |
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| CDS CCA 90 bp | GCCTCCGGCTCTTCACCAGGGCCAAACCAGCTCTGGGATCATAGATaGTCACCTTCTTGTCATAGGTACCAGTCACCAGGATATCAGGTT | + |
|
Preference number: 5 (lower is better) Translates to: ASGSSPGPNQLWDHR*SPSCHRYQSPGYQV Trigger: AACCTGATATCCTGGTGACTGGTACCTATGACAAGAAGGTGACCATCTATGATCCCAGAGCTGGTTTGGCCCTGGTGAAGAGCCGGAGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095220.4 |
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| CDS-3UTR CAA 90 bp | TCATTCAGGCATGGTGGCACACCTACCATCCCAACACGTGGGAGATATAAGCAAACTGCCGCCTTGCCCTaGATCTCTCCAAACTGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: SFRHGGTPTIPTRGRYKQTAALP*ISPNCC Trigger: GCAGCAGTTTGGAGAGATCAAGGGCAAGGCGGCAGT...TTGCTTATATCTCCCACGTGTTGGGATGGTAGGTGTGCCACCATGCCTGAATGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095220.4 |
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| CDS CAA 90 bp | TCCGGGGGAAGGCTCAAGAGGCCCGGTAGGCGCACGGCCGGGACTTaGGAGGCGGCCTTTCGCTCCGGCACGCCTAGGGACGCGGAGAAC | + |
|
Preference number: 6 (lower is better) Translates to: SGGRLKRPGRRTAGT*EAAFRSGTPRDAEN Trigger: GTTCTCCGCGTCCCTAGGCGTGCCGGAGCGAAAGGCCGCCTCCAAAGTCCCGGCCGTGCGCCTACCGGGCCTCTTGAGCCTTCCCCCGGA 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095220.4 |
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| CDS CAA 72 bp | AGGCTCAAGAGGCCCGGTAGGCGCACGGCCGGGACTTaGGAGGCGGCCTTTCGCTCCGGCACGCCTAGGGAC | + |
|
Preference number: 6 (lower is better) Translates to: RLKRPGRRTAGT*EAAFRSGTPRD Trigger: GTCCCTAGGCGTGCCGGAGCGAAAGGCCGCCTCCAAAGTCCCGGCCGTGCGCCTACCGGGCCTCTTGAGCCT 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095220.4 |
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| CDS TCA 72 bp | GTGCGCGTACGCGGCGCTGAGCGCGTAGCCTCCAGGTaGCACGATCACGCACGAGGTCGTGCAACGCTTGGC | + |
|
Preference number: 6 (lower is better) Translates to: VRVRGAERVASR*HDHARGRATLG Trigger: GCCAAGCGTTGCACGACCTCGTGCGTGATCGTGTCACCTGGAGGCTACGCGCTCAGCGCCGCGTACGCGCAC 68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095220.4 |
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| CDS CAA 72 bp | GGGAGGGGTAAGCACACGGGCTACGTAGGCCTCAGCTaGAGTGTCAGGGTCGGGATCTGGCTCGGGGTCAGA | + |
|
Preference number: 6 (lower is better) Translates to: GRGKHTGYVGLS*SVRVGIWLGVR Trigger: TCTGACCCCGAGCCAGATCCCGACCCTGACACTCAAGCTGAGGCCTACGTAGCCCGTGTGCTTACCCCTCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095220.4 |
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| CDS CAA 90 bp | AGAACTCGGCTGGGATCCTTCCCTAGATGGCGCAGGTCCCACAGGTaGACATTCCGATCCCGGGAGCCTGACAGACACAGTGCCCCACCC | + |
|
Preference number: 6 (lower is better) Translates to: RTRLGSFPRWRRSHR*TFRSREPDRHSAPP Trigger: GGGTGGGGCACTGTGTCTGTCAGGCTCCCGGGATCGGAATGTCAACCTGTGGGACCTGCGCCATCTAGGGAAGGATCCCAGCCGAGTTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095220.4 |
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| CDS CCA 72 bp | GCGGGCCAGGTGCTGCTCCAGCTCAATGCAGGCGGCTaGCCAGTCAAAGTTCTCCTCTTCCACCACTGGGTA | + |
|
Preference number: 6 (lower is better) Translates to: AGQVLLQLNAGG*PVKVLLFHHWV Trigger: TACCCAGTGGTGGAAGAGGAGAACTTTGACTGGCCAGCCGCCTGCATTGAGCTGGAGCAGCACCTGGCCCGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095220.4 |
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| CDS CAA 72 bp | CGGTGGTCCTGCGCTGCTAGCGACCATACCCAGCCCTaGTGTGTGCTATTGCCCTGGGTGCCTAAGGCCTTC | + |
|
Preference number: 6 (lower is better) Translates to: RWSCAASDHTQP*CVLLPWVPKAF Trigger: GAAGGCCTTAGGCACCCAGGGCAATAGCACACACAAGGGCTGGGTATGGTCGCTAGCAGCGCAGGACCACCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095220.4 |
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| CDS CAA 72 bp | CATGCCTGTCATCTGCCAGCACTGCTAGCACCGCGCTaGAGTGCAGCCTCCGGCTCTTCACCAGGGCCAAAC | + |
|
Preference number: 6 (lower is better) Translates to: HACHLPALLAPR*SAASGSSPGPN Trigger: GTTTGGCCCTGGTGAAGAGCCGGAGGCTGCACTCAAGCGCGGTGCTAGCAGTGCTGGCAGATGACAGGCATG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095220.4 |
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| CDS CAA 90 bp | TGGTCCTGCGCTGCTAGCGACCATACCCAGCCCTTGTGTGTGCTATaGCCCTGGGTGCCTAAGGCCTTCACCAGAACTCGGCTGGGATCC | + |
|
Preference number: 6 (lower is better) Translates to: WSCAASDHTQPLCVL*PWVPKAFTRTRLGS Trigger: GGATCCCAGCCGAGTTCTGGTGAAGGCCTTAGGCACCCAGGGCAATAGCACACACAAGGGCTGGGTATGGTCGCTAGCAGCGCAGGACCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095220.4 |
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| CDS CCA 72 bp | CGATCCCGGGAGCCTGACAGACACAGTGCCCCACCCTaGAGCAGCAACACCGCATCAATGGAAGCAAAGTGG | + |
|
Preference number: 6 (lower is better) Translates to: RSREPDRHSAPP*SSNTASMEAKW Trigger: CCACTTTGCTTCCATTGATGCGGTGTTGCTGCTCCAGGGTGGGGCACTGTGTCTGTCAGGCTCCCGGGATCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095220.4 |
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| CDS CCA 72 bp | GCCTTCACCAGAACTCGGCTGGGATCCTTCCCTAGATaGCGCAGGTCCCACAGGTTGACATTCCGATCCCGG | + |
|
Preference number: 6 (lower is better) Translates to: AFTRTRLGSFPR*RRSHRLTFRSR Trigger: CCGGGATCGGAATGTCAACCTGTGGGACCTGCGCCATCTAGGGAAGGATCCCAGCCGAGTTCTGGTGAAGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095220.4 |
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| CDS CAA 90 bp | GAGCACACACGGTGGTCCTGCGCTGCTAGCGACCATACCCAGCCCTaGTGTGTGCTATTGCCCTGGGTGCCTAAGGCCTTCACCAGAACT | + |
|
Preference number: 6 (lower is better) Translates to: EHTRWSCAASDHTQP*CVLLPWVPKAFTRT Trigger: AGTTCTGGTGAAGGCCTTAGGCACCCAGGGCAATAGCACACACAAGGGCTGGGTATGGTCGCTAGCAGCGCAGGACCACCGTGTGTGCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095220.4 |
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| CDS TCA 72 bp | TGGGATCCTTCCCTAGATGGCGCAGGTCCCACAGGTTaGCATTCCGATCCCGGGAGCCTGACAGACACAGTG | + |
|
Preference number: 6 (lower is better) Translates to: WDPSLDGAGPTG*HSDPGSLTDTV Trigger: CACTGTGTCTGTCAGGCTCCCGGGATCGGAATGTCAACCTGTGGGACCTGCGCCATCTAGGGAAGGATCCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095220.4 |
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| CDS GCA 72 bp | CCTGCGCTGCTAGCGACCATACCCAGCCCTTGTGTGTaGTATTGCCCTGGGTGCCTAAGGCCTTCACCAGAA | + |
|
Preference number: 6 (lower is better) Translates to: PALLATIPSPCV*YCPGCLRPSPE Trigger: TTCTGGTGAAGGCCTTAGGCACCCAGGGCAATAGCACACACAAGGGCTGGGTATGGTCGCTAGCAGCGCAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095220.4 |
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| CDS GCA 72 bp | AGCACTGCCGCCTTGCCCTTGATCTCTCCAAACTGCTaGCCATCAGCCGCCATGTCCCACAGCTTCACAGTG | + |
|
Preference number: 6 (lower is better) Translates to: STAALPLISPNC*PSAAMSHSFTV Trigger: CACTGTGAAGCTGTGGGACATGGCGGCTGATGGGCAGCAGTTTGGAGAGATCAAGGGCAAGGCGGCAGTGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095220.4 |
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| CDS GCA 72 bp | CACAGCACTGCCGCCTTGCCCTTGATCTCTCCAAACTaGTGCCCATCAGCCGCCATGTCCCACAGCTTCACA | + |
|
Preference number: 6 (lower is better) Translates to: HSTAALPLISPN*CPSAAMSHSFT Trigger: TGTGAAGCTGTGGGACATGGCGGCTGATGGGCAGCAGTTTGGAGAGATCAAGGGCAAGGCGGCAGTGCTGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095220.4 |
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| CDS CAA 72 bp | CTGGGATCCTTCCCTAGATGGCGCAGGTCCCACAGGTaGACATTCCGATCCCGGGAGCCTGACAGACACAGT | + |
|
Preference number: 6 (lower is better) Translates to: LGSFPRWRRSHR*TFRSREPDRHS Trigger: ACTGTGTCTGTCAGGCTCCCGGGATCGGAATGTCAACCTGTGGGACCTGCGCCATCTAGGGAAGGATCCCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095220.4 |
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| CDS CAA 72 bp | GCTGCTAGCGACCATACCCAGCCCTTGTGTGTGCTATaGCCCTGGGTGCCTAAGGCCTTCACCAGAACTCGG | + |
|
Preference number: 6 (lower is better) Translates to: AASDHTQPLCVL*PWVPKAFTRTR Trigger: CCGAGTTCTGGTGAAGGCCTTAGGCACCCAGGGCAATAGCACACACAAGGGCTGGGTATGGTCGCTAGCAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095220.4 |
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| CDS CAA 90 bp | CTCCAGACCTCCAATGACAGGCCACCAGAGGCAGCCACCACTACGTaGCCCTCAGCACAGATCCCATTTAACACGTTGTGGTGGCTTCGG | + |
|
Preference number: 6 (lower is better) Translates to: LQTSNDRPPEAATTT*PSAQIPFNTLWWLR Trigger: CCGAAGCCACCACAACGTGTTAAATGGGATCTGTGCTGAGGGCAACGTAGTGGTGGCTGCCTCTGGTGGCCTGTCATTGGAGGTCTGGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095220.4 |
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| CDS GCA 72 bp | ACAAGCTGGAAGCAACCATCTCGATTGGCGAAGACGTaGAGCAGACCCTGGTTGTCACCTGCCCAGAGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: TSWKQPSRLAKT*SRPWLSPAQSW Trigger: CCAGCTCTGGGCAGGTGACAACCAGGGTCTGCTGCACGTCTTCGCCAATCGAGATGGTTGCTTCCAGCTTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095220.4 |
||
| CDS CAA 90 bp | GCAGCCACCACTACGTTGCCCTCAGCACAGATCCCATTTAACACGTaGTGGTGGCTTCGGGTACAGATGGTCCTAGGTGGATCTGTGGGC | + |
|
Preference number: 6 (lower is better) Translates to: AATTTLPSAQIPFNT*WWLRVQMVLGGSVG Trigger: GCCCACAGATCCACCTAGGACCATCTGTACCCGAAGCCACCACAACGTGTTAAATGGGATCTGTGCTGAGGGCAACGTAGTGGTGGCTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095220.4 |
||
| CDS GCA 72 bp | CACCAGGATATCAGGTTGGTAGGAAAGGCACAGCACTaGCGCCTTGCCCTTGATCTCTCCAAACTGCTGCCC | + |
|
Preference number: 6 (lower is better) Translates to: HQDIRLVGKAQH*RLALDLSKLLP Trigger: GGGCAGCAGTTTGGAGAGATCAAGGGCAAGGCGGCAGTGCTGTGCCTTTCCTACCAACCTGATATCCTGGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095220.4 |
||
| CDS CCA 72 bp | CACGTTGTGGTGGCTTCGGGTACAGATGGTCCTAGGTaGATCTGTGGGCACGTGAACCCGAATGGTCTTGTC | + |
|
Preference number: 6 (lower is better) Translates to: HVVVASGTDGPR*ICGHVNPNGLV Trigger: GACAAGACCATTCGGGTTCACGTGCCCACAGATCCACCTAGGACCATCTGTACCCGAAGCCACCACAACGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095220.4 |
||
| CDS CCA 72 bp | CAAAGGACCGAACAAGCTGGAAGCAACCATCTCGATTaGCGAAGACGTGCAGCAGACCCTGGTTGTCACCTG | + |
|
Preference number: 6 (lower is better) Translates to: QRTEQAGSNHLD*RRRAADPGCHL Trigger: CAGGTGACAACCAGGGTCTGCTGCACGTCTTCGCCAATCGAGATGGTTGCTTCCAGCTTGTTCGGTCCTTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095220.4 |
||
| CDS CAA 72 bp | TCAAAGGACCGAACAAGCTGGAAGCAACCATCTCGATaGGCGAAGACGTGCAGCAGACCCTGGTTGTCACCT | + |
|
Preference number: 6 (lower is better) Translates to: SKDRTSWKQPSR*AKTCSRPWLSP Trigger: AGGTGACAACCAGGGTCTGCTGCACGTCTTCGCCAATCGAGATGGTTGCTTCCAGCTTGTTCGGTCCTTTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095220.4 |
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| CDS CAA 90 bp | GATGGTCACCTTCTTGTCATAGGTACCAGTCACCAGGATATCAGGTaGGTAGGAAAGGCACAGCACTGCCGCCTTGCCCTTGATCTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: DGHLLVIGTSHQDIR*VGKAQHCRLALDLS Trigger: GGAGAGATCAAGGGCAAGGCGGCAGTGCTGTGCCTTTCCTACCAACCTGATATCCTGGTGACTGGTACCTATGACAAGAAGGTGACCATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095220.4 |
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| CDS CCA 72 bp | ACGCTATTGGCTCGACGATCAAATACCACAAGGCTGTaGTCCTCGCTGCCTGAGATGACATGCCTGTCATCT | + |
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Preference number: 6 (lower is better) Translates to: TLLARRSNTTRL*SSLPEMTCLSS Trigger: AGATGACAGGCATGTCATCTCAGGCAGCGAGGACCACAGCCTTGTGGTATTTGATCGTCGAGCCAATAGCGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095220.4 |
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| CDS CCA 72 bp | TTGCCCTCAGCACAGATCCCATTTAACACGTTGTGGTaGCTTCGGGTACAGATGGTCCTAGGTGGATCTGTG | + |
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Preference number: 6 (lower is better) Translates to: LPSAQIPFNTLW*LRVQMVLGGSV Trigger: CACAGATCCACCTAGGACCATCTGTACCCGAAGCCACCACAACGTGTTAAATGGGATCTGTGCTGAGGGCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095220.4 |
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| CDS CCA 72 bp | TCTTCACCAGGGCCAAACCAGCTCTGGGATCATAGATaGTCACCTTCTTGTCATAGGTACCAGTCACCAGGA | + |
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Preference number: 6 (lower is better) Translates to: SSPGPNQLWDHR*SPSCHRYQSPG Trigger: TCCTGGTGACTGGTACCTATGACAAGAAGGTGACCATCTATGATCCCAGAGCTGGTTTGGCCCTGGTGAAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095220.4 |
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