Pregenerated sensors for FBXW8 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032867Ensembl transcript IDs: ENSMUST00000049474.9
Found 208 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR GCA 90 bp | CATCCCAGCACACAGGAGGAGACCACCAGGGCTCGGGGAGGGCACTaGACACCCTCTCAGGCCTTCCAGCACCTTCCTGCTGCCAGCCTG | + |
Preference number: 1 (lower is better) Translates to: HPSTQEETTRARGGH*TPSQAFQHLPAASL Trigger: CAGGCTGGCAGCAGGAAGGTGCTGGAAGGCCTGAGAGGGTGTGCAGTGCCCTCCCCGAGCCCTGGTGGTCTCCTCCTGTGTGCTGGGATG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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3UTR CCA 90 bp | ATGTGTGACCACCCCTGGCTCCCAGGGCTGTGTCCTGGTGTCTTCTaGCTTCAGAGGCAGCACAGGGAGCCAGCCTGTCCCCCACCCTGG | + |
Preference number: 1 (lower is better) Translates to: MCDHPWLPGLCPGVF*LQRQHREPACPPPW Trigger: CCAGGGTGGGGGACAGGCTGGCTCCCTGTGCTGCCTCTGAAGCCAGAAGACACCAGGACACAGCCCTGGGAGCCAGGGGTGGTCACACAT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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3UTR CCA 90 bp | GCAGGCCTGCCGCAGGAGCCAGGTAACCCATCTGGCTTGGCTGTGTaGGCCACGGTGCCATGGCCCGTGCCATCTGCTGCTTCAAGCAAG | + |
Preference number: 1 (lower is better) Translates to: AGLPQEPGNPSGLAV*ATVPWPVPSAASSK Trigger: CTTGCTTGAAGCAGCAGATGGCACGGGCCATGGCACCGTGGCCCACACAGCCAAGCCAGATGGGTTACCTGGCTCCTGCGGCAGGCCTGC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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3UTR CCA 90 bp | AAGTCACCGCAGGCCTGCCGCAGGAGCCAGGTAACCCATCTGGCTTaGCTGTGTGGGCCACGGTGCCATGGCCCGTGCCATCTGCTGCTT | + |
Preference number: 1 (lower is better) Translates to: KSPQACRRSQVTHLA*LCGPRCHGPCHLLL Trigger: AAGCAGCAGATGGCACGGGCCATGGCACCGTGGCCCACACAGCCAAGCCAGATGGGTTACCTGGCTCCTGCGGCAGGCCTGCGGTGACTT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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3UTR CCA 90 bp | AAGGGCAGCTGCCACAGCACAAGCTCGGCTCGGCCAGGCACAGGCTaGTGCTCCTCTTCTGTTCCAGGGAGAAGTTCCCTAGTGCACCGC | + |
Preference number: 1 (lower is better) Translates to: KGSCHSTSSARPGTG*CSSSVPGRSSLVHR Trigger: GCGGTGCACTAGGGAACTTCTCCCTGGAACAGAAGAGGAGCACCAGCCTGTGCCTGGCCGAGCCGAGCTTGTGCTGTGGCAGCTGCCCTT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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3UTR TCA 90 bp | GACAGCTGGGGAGGCAGCTTGGAGGCTGACGCTTGCCTATGCGTGTaGGATTCTGGTTCCACCCTCAGCACCACACCCAGGAGACAGTGC | + |
Preference number: 1 (lower is better) Translates to: DSWGGSLEADACLCV*DSGSTLSTTPRRQC Trigger: GCACTGTCTCCTGGGTGTGGTGCTGAGGGTGGAACCAGAATCTCACACGCATAGGCAAGCGTCAGCCTCCAAGCTGCCTCCCCAGCTGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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3UTR TCA 90 bp | ACAGAAATGTCTCCAGTGGACAGCTTAGGACTGGGAATGCTCGAGTaGGGACACAGCAAGACCAGGCCAGCAGGGGGCGCCAGCCCAGCA | + |
Preference number: 1 (lower is better) Translates to: TEMSPVDSLGLGMLE*GHSKTRPAGGASPA Trigger: TGCTGGGCTGGCGCCCCCTGCTGGCCTGGTCTTGCTGTGTCCTCACTCGAGCATTCCCAGTCCTAAGCTGTCCACTGGAGACATTTCTGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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3UTR CCA 90 bp | ACAGGGCTTGGGGCAGGAACATGGCCACAGGAGGACTCGGAACTCTaGCCAGGGCAGGGTGGCAAAACAGTAACACTAAGCCAGCAAGGG | + |
Preference number: 1 (lower is better) Translates to: TGLGAGTWPQEDSEL*PGQGGKTVTLSQQG Trigger: CCCTTGCTGGCTTAGTGTTACTGTTTTGCCACCCTGCCCTGGCCAGAGTTCCGAGTCCTCCTGTGGCCATGTTCCTGCCCCAAGCCCTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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3UTR GCA 90 bp | CACCTTGAGGTTTGGCAAACACCTGCCATAAAGGCTGTCCTTGTATaGCGTGACCTTGAGGGAGCCAGTGCCGGAACCAGGCCACTCCCG | + |
Preference number: 1 (lower is better) Translates to: HLEVWQTPAIKAVLV*RDLEGASAGTRPLP Trigger: CGGGAGTGGCCTGGTTCCGGCACTGGCTCCCTCAAGGTCACGGCATACAAGGACAGCCTTTATGGCAGGTGTTTGCCAAACCTCAAGGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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3UTR CCA 90 bp | TGTCTCCTGAGACCTGGTGGCCTCTGTGCAGGTGTGTTAGGTGCCTaGTCTGTGGGGATTCTGAAGAGCTCTGACTGGGTCTCCTGGCCA | + |
Preference number: 1 (lower is better) Translates to: CLLRPGGLCAGVLGA*SVGILKSSDWVSWP Trigger: TGGCCAGGAGACCCAGTCAGAGCTCTTCAGAATCCCCACAGACCAGGCACCTAACACACCTGCACAGAGGCCACCAGGTCTCAGGAGACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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3UTR CCA 90 bp | CATGCCACCCTTATGGGGGTACCAAGTGCCCCTGCTGAGGGAGGCTaGCAATCCTGTCGCTCAGCTGAAAGACACCACAGTACCCTAGAC | + |
Preference number: 1 (lower is better) Translates to: HATLMGVPSAPAEGG*QSCRSAERHHSTLD Trigger: GTCTAGGGTACTGTGGTGTCTTTCAGCTGAGCGACAGGATTGCCAGCCTCCCTCAGCAGGGGCACTTGGTACCCCCATAAGGGTGGCATG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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3UTR GCA 90 bp | GGAGGTGAGCTCCCCTGGGCACTTGTGCATGGGGAGAGGCCTCAATaGCAAGATCTGAGATCATGCCACAAACCCACTAGACTCCATCCC | + |
Preference number: 1 (lower is better) Translates to: GGELPWALVHGERPQ*QDLRSCHKPTRLHP Trigger: GGGATGGAGTCTAGTGGGTTTGTGGCATGATCTCAGATCTTGGCATTGAGGCCTCTCCCCATGCACAAGTGCCCAGGGGAGCTCACCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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3UTR TCA 90 bp | GGCTGCGTTTGTCAGGAAGAGACACCACCGGCTAGGCTTGGAGACTaGCCCTATCCCTGTGCAATGACCCTTTCCCTCTGCAGGAAGGAT | + |
Preference number: 1 (lower is better) Translates to: GCVCQEETPPARLGD*PYPCAMTLSLCRKD Trigger: ATCCTTCCTGCAGAGGGAAAGGGTCATTGCACAGGGATAGGGTCAGTCTCCAAGCCTAGCCGGTGGTGTCTCTTCCTGACAAACGCAGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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3UTR TCA 90 bp | GGAACCAGGCCACTCCCGATGGCATCACTGGCACCTTTGTCTTCATaGGTTGGACAAATGCCAACAGGGCTTGGGGCAGGAACATGGCCA | + |
Preference number: 1 (lower is better) Translates to: GTRPLPMASLAPLSS*VGQMPTGLGAGTWP Trigger: TGGCCATGTTCCTGCCCCAAGCCCTGTTGGCATTTGTCCAACTCATGAAGACAAAGGTGCCAGTGATGCCATCGGGAGTGGCCTGGTTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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3UTR TCA 90 bp | GAACAAAGCCCCTCTGTTAGGTGGGAGAGGGCAGGCCCTCAGGTCTaGTCCTCTGCAGTTGACCAGTCCAAGTTCCACTGTGCTGGAAGA | + |
Preference number: 1 (lower is better) Translates to: EQSPSVRWERAGPQV*SSAVDQSKFHCAGR Trigger: TCTTCCAGCACAGTGGAACTTGGACTGGTCAACTGCAGAGGATCAGACCTGAGGGCCTGCCCTCTCCCACCTAACAGAGGGGCTTTGTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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3UTR TCA 90 bp | GAAAGACACCACAGTACCCTAGACTCTGCCATGGGAACTGCTGTCTaGGCTTCAGGAGCAGCATGTCGCCTGCATGGACAGCCTAGTCTG | + |
Preference number: 1 (lower is better) Translates to: ERHHSTLDSAMGTAV*ASGAACRLHGQPSL Trigger: CAGACTAGGCTGTCCATGCAGGCGACATGCTGCTCCTGAAGCTCAGACAGCAGTTCCCATGGCAGAGTCTAGGGTACTGTGGTGTCTTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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3UTR TCA 90 bp | TGCAGGTGTGTTAGGTGCCTGGTCTGTGGGGATTCTGAAGAGCTCTaGCTGGGTCTCCTGGCCACTATGTGTGGATTTGTCCATGACACT | + |
Preference number: 1 (lower is better) Translates to: CRCVRCLVCGDSEEL*LGLLATMCGFVHDT Trigger: AGTGTCATGGACAAATCCACACATAGTGGCCAGGAGACCCAGTCAGAGCTCTTCAGAATCCCCACAGACCAGGCACCTAACACACCTGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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3UTR TCA 90 bp | AGAGGCCCAAGTTGGTGGAAGGAGAGGCAGAAGTGCAAGTCACCTTaGGGTTTGGCAAACACCTGCCATAAAGGCTGTCCTTGTATGCCG | + |
Preference number: 1 (lower is better) Translates to: RGPSWWKERQKCKSP*GLANTCHKGCPCMP Trigger: CGGCATACAAGGACAGCCTTTATGGCAGGTGTTTGCCAAACCTCAAGGTGACTTGCACTTCTGCCTCTCCTTCCACCAACTTGGGCCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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3UTR GCA 90 bp | GACACAGAACTTATGGGTAAGAAACAGAGCAAGCCCAGAGCAGCCTaGCACTCTGACCACTTGGCAAACCAGGCTCTTCGAGACGTGAAC | + |
Preference number: 1 (lower is better) Translates to: DTELMGKKQSKPRAA*HSDHLANQALRDVN Trigger: GTTCACGTCTCGAAGAGCCTGGTTTGCCAAGTGGTCAGAGTGGCAGGCTGCTCTGGGCTTGCTCTGTTTCTTACCCATAAGTTCTGTGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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3UTR CCA 90 bp | AGGGCATGTATGCTTGAAACTACTCTAGTCACCTCTGCTCTTCAGTaGCCTTTCATGGCTGCGAAGCCCAGAAAGGAGCTGACCGCACAG | + |
Preference number: 1 (lower is better) Translates to: RACMLETTLVTSALQ*PFMAAKPRKELTAQ Trigger: CTGTGCGGTCAGCTCCTTTCTGGGCTTCGCAGCCATGAAAGGCCACTGAAGAGCAGAGGTGACTAGAGTAGTTTCAAGCATACATGCCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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3UTR CCA 90 bp | AGACATGGCTGGATGGATACCTGCAGCCTAGTGACACAGAACTTATaGGTAAGAAACAGAGCAAGCCCAGAGCAGCCTGCCACTCTGACC | + |
Preference number: 1 (lower is better) Translates to: RHGWMDTCSLVTQNL*VRNRASPEQPATLT Trigger: GGTCAGAGTGGCAGGCTGCTCTGGGCTTGCTCTGTTTCTTACCCATAAGTTCTGTGTCACTAGGCTGCAGGTATCCATCCAGCCATGTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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3UTR TCA 90 bp | CTGACAATTGATTCTAGAGATTGGTCCTCAAACTTAAAATCCTCCTaGGTGGTGGGACACTCAGCGAGTGTGTGTGTGTGGCATCACAAT | + |
Preference number: 1 (lower is better) Translates to: LTIDSRDWSSNLKSS*VVGHSASVCVWHHN Trigger: ATTGTGATGCCACACACACACACTCGCTGAGTGTCCCACCACTCAGGAGGATTTTAAGTTTGAGGACCAATCTCTAGAATCAATTGTCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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3UTR CAA 90 bp | GGGACTCAAAGGGCCCCTGCCGCGGTGAGAGGCAGCACGTCTGTCTaGGGAAGGGCAGCTGCCACAGCACAAGCTCGGCTCGGCCAGGCA | + |
Preference number: 2 (lower is better) Translates to: GTQRAPAAVRGSTSV*GRAAATAQARLGQA Trigger: TGCCTGGCCGAGCCGAGCTTGTGCTGTGGCAGCTGCCCTTCCCAAGACAGACGTGCTGCCTCTCACCGCGGCAGGGGCCCTTTGAGTCCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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3UTR CAA 90 bp | CAAGTCACCGCAGGCCTGCCGCAGGAGCCAGGTAACCCATCTGGCTaGGCTGTGTGGGCCACGGTGCCATGGCCCGTGCCATCTGCTGCT | + |
Preference number: 2 (lower is better) Translates to: QVTAGLPQEPGNPSG*AVWATVPWPVPSAA Trigger: AGCAGCAGATGGCACGGGCCATGGCACCGTGGCCCACACAGCCAAGCCAGATGGGTTACCTGGCTCCTGCGGCAGGCCTGCGGTGACTTG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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3UTR-3UTR GCA 90 bp | AGCTGCCACAGCACAAGCTCGGCTCGGCCAGGCACAGGCTGGTGCTCCTCTTCTGCCAGCGAGGACAGATaGTCTGTGGGGGTAGGGGGC | + |
Preference number: 2 (lower is better) Translates to: SCHSTSSARPGTGWCSSSASEDR*SVGVGG Trigger: GCCCCCTACCCCCACAGAGCATCTGTCCTCGCTGGC...AGAAGAGGAGCACCAGCCTGTGCCTGGCCGAGCCGAGCTTGTGCTGTGGCAGCT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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3UTR-3UTR GCA 90 bp | ACAGCACAAGCTCGGCTCGGCCAGGCACAGGCTGGTGCTCCTCTTCTGTTCCAGTCCCAGAGGAGGGGCTaGACTGGAGGGTGCCTGGAG | + |
Preference number: 2 (lower is better) Translates to: TAQARLGQAQAGAPLLFQSQRRG*TGGCLE Trigger: CTCCAGGCACCCTCCAGTGCAGCCCCTCCTCTGGGA...CTGGAACAGAAGAGGAGCACCAGCCTGTGCCTGGCCGAGCCGAGCTTGTGCTGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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3UTR-3UTR CCA 90 bp | GGGGCGCCAGCCCAGCAAGAGGGAGGTGAGCTCCCCTGGGCACTTGTGCATGGGTTGTCTCCTGAGACCTaGTGGCCTCTGTGCAGGTGT | + |
Preference number: 2 (lower is better) Translates to: GAPAQQEGGELPWALVHGLSPET*WPLCRC Trigger: ACACCTGCACAGAGGCCACCAGGTCTCAGGAGACAA...CCCATGCACAAGTGCCCAGGGGAGCTCACCTCCCTCTTGCTGGGCTGGCGCCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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3UTR-3UTR CCA 90 bp | AGCTGCCACAGCACAAGCTCGGCTCGGCCAGGCACAGGCTGGTGCTCCTCTTCTGGAGGTGAGCTCCCCTaGGCACTTGTGCATGGGGAG | + |
Preference number: 2 (lower is better) Translates to: SCHSTSSARPGTGWCSSSGGELP*ALVHGE Trigger: CTCCCCATGCACAAGTGCCCAGGGGAGCTCACCTCC...AGAAGAGGAGCACCAGCCTGTGCCTGGCCGAGCCGAGCTTGTGCTGTGGCAGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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3UTR-3UTR GCA 90 bp | GGGGCGCCAGCCCAGCAAGAGGGAGGTGAGCTCCCCTGGGCACTTGTGCATGGGTGCAGGTGTGTTAGGTaGCTGGTCTGTGGGGATTCT | + |
Preference number: 2 (lower is better) Translates to: GAPAQQEGGELPWALVHGCRCVR*LVCGDS Trigger: AGAATCCCCACAGACCAGGCACCTAACACACCTGCA...CCCATGCACAAGTGCCCAGGGGAGCTCACCTCCCTCTTGCTGGGCTGGCGCCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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3UTR-3UTR CCA 90 bp | AGCAGGGGGCGCCAGCCCAGCAAGAGGGAGGTGAGCTCCCCTGGGCACTTGTGCATGCGTGTGAGATTCTaGTTCCACCCTCAGCACCAC | + |
Preference number: 2 (lower is better) Translates to: SRGRQPSKREVSSPGHLCMRVRF*FHPQHH Trigger: GTGGTGCTGAGGGTGGAACCAGAATCTCACACGCAT...GCACAAGTGCCCAGGGGAGCTCACCTCCCTCTTGCTGGGCTGGCGCCCCCTGCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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3UTR-3UTR CCA 90 bp | GGGGCGCCAGCCCAGCAAGAGGGAGGTGAGCTCCCCTGGGCACTTGTGCATGGGACTCTGAAGGCAGAGTaGGTGAGCTATGGCTGCGTT | + |
Preference number: 2 (lower is better) Translates to: GAPAQQEGGELPWALVHGTLKAE*VSYGCV Trigger: AACGCAGCCATAGCTCACCCACTCTGCCTTCAGAGT...CCCATGCACAAGTGCCCAGGGGAGCTCACCTCCCTCTTGCTGGGCTGGCGCCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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3UTR-3UTR CCA 90 bp | AGCTGCCACAGCACAAGCTCGGCTCGGCCAGGCACAGGCTGGTGCTCCTCTTCTATGTGTGACCACCCCTaGCTCCCAGGGCTGTGTCCT | + |
Preference number: 2 (lower is better) Translates to: SCHSTSSARPGTGWCSSSMCDHP*LPGLCP Trigger: AGGACACAGCCCTGGGAGCCAGGGGTGGTCACACAT...AGAAGAGGAGCACCAGCCTGTGCCTGGCCGAGCCGAGCTTGTGCTGTGGCAGCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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3UTR-3UTR TCA 90 bp | GGGGCGCCAGCCCAGCAAGAGGGAGGTGAGCTCCCCTGGGCACTTGTGCATGGGGTGTGGATTTGTCCATaGCACTCTGAAGGCAGAGTG | + |
Preference number: 2 (lower is better) Translates to: GAPAQQEGGELPWALVHGVWICP*HSEGRV Trigger: CACTCTGCCTTCAGAGTGTCATGGACAAATCCACAC...CCCATGCACAAGTGCCCAGGGGAGCTCACCTCCCTCTTGCTGGGCTGGCGCCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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3UTR-3UTR GCA 90 bp | TTGGGGCAGGAACATGGCCACAGGAGGACTCGGAACTCTGGCCAGGGCAGGGTGACCTGGTGGCCTCTGTaGAGGTGTGTTAGGTGCCTG | + |
Preference number: 2 (lower is better) Translates to: LGQEHGHRRTRNSGQGRVTWWPL*RCVRCL Trigger: CAGGCACCTAACACACCTGCACAGAGGCCACCAGGT...CACCCTGCCCTGGCCAGAGTTCCGAGTCCTCCTGTGGCCATGTTCCTGCCCCAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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3UTR-3UTR CCA 90 bp | GACAAATGCCAACAGGGCTTGGGGCAGGAACATGGCCACAGGAGGACTCGGAACTGGGCCACGGTGCCATaGCCCGTGCCATCTGCTGCT | + |
Preference number: 2 (lower is better) Translates to: DKCQQGLGQEHGHRRTRNWATVP*PVPSAA Trigger: AGCAGCAGATGGCACGGGCCATGGCACCGTGGCCCA...GTTCCGAGTCCTCCTGTGGCCATGTTCCTGCCCCAAGCCCTGTTGGCATTTGTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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3UTR-3UTR GCA 90 bp | CAGAAGTGGCCGCTTAAGGCAAAAGGCAAGCTGCAGATGTGTGACCACCCCTGGCCAGCACCTTCCTGCTaGCAGCCTGGGATCCACCCC | + |
Preference number: 2 (lower is better) Translates to: QKWPLKAKGKLQMCDHPWPAPSC*QPGIHP Trigger: GGGGTGGATCCCAGGCTGGCAGCAGGAAGGTGCTGG...CCAGGGGTGGTCACACATCTGCAGCTTGCCTTTTGCCTTAAGCGGCCACTTCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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3UTR-3UTR TCA 90 bp | CAGAAGTGGCCGCTTAAGGCAAAAGGCAAGCTGCAGATGTGTGACCACCCCTGGCCAGCAAGAGGGAGGTaGGCTCCCCTGGGCACTTGT | + |
Preference number: 2 (lower is better) Translates to: QKWPLKAKGKLQMCDHPWPARGR*APLGTC Trigger: ACAAGTGCCCAGGGGAGCTCACCTCCCTCTTGCTGG...CCAGGGGTGGTCACACATCTGCAGCTTGCCTTTTGCCTTAAGCGGCCACTTCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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3UTR-3UTR CCA 90 bp | AGGGGGCAGGGATTGGGGGCTAGAAGGGCATGTATGCTTGAAACTACTCTAGTCGAGGAGGGGCTGCACTaGAGGGTGCCTGGAGGAGAC | + |
Preference number: 2 (lower is better) Translates to: RGQGLGARRACMLETTLVEEGLH*RVPGGD Trigger: GTCTCCTCCAGGCACCCTCCAGTGCAGCCCCTCCTC...GACTAGAGTAGTTTCAAGCATACATGCCCTTCTAGCCCCCAATCCCTGCCCCCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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3UTR CAA 90 bp | CTGTTAGGTGGGAGAGGGCAGGCCCTCAGGTCTGATCCTCTGCAGTaGACCAGTCCAAGTTCCACTGTGCTGGAAGAGGCCCAAGTTGGT | + |
Preference number: 2 (lower is better) Translates to: LLGGRGQALRSDPLQ*TSPSSTVLEEAQVG Trigger: ACCAACTTGGGCCTCTTCCAGCACAGTGGAACTTGGACTGGTCAACTGCAGAGGATCAGACCTGAGGGCCTGCCCTCTCCCACCTAACAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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3UTR-3UTR TCA 90 bp | CCCCCAGCCGGGGGAAATAAACCAGACTACACAGGGCAGAGGAAGACTTCAAACAGGAGACAGTGCAAGTaGAGGCCCTGTGTCCCTGGC | + |
Preference number: 2 (lower is better) Translates to: PPAGGNKPDYTGQRKTSNRRQCK*RPCVPG Trigger: GCCAGGGACACAGGGCCTTCACTTGCACTGTCTCCT...GTTTGAAGTCTTCCTCTGCCCTGTGTAGTCTGGTTTATTTCCCCCGGCTGGGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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3UTR-3UTR GCA 90 bp | GGAGGTGAGCTCCCCTGGGCACTTGTGCATGGGGAGAGGCCTCAATGCCAAGATATGACCCTTTCCCTCTaGAGGAAGGATGGCTGTCTC | + |
Preference number: 2 (lower is better) Translates to: GGELPWALVHGERPQCQDMTLSL*RKDGCL Trigger: GAGACAGCCATCCTTCCTGCAGAGGGAAAGGGTCAT...ATCTTGGCATTGAGGCCTCTCCCCATGCACAAGTGCCCAGGGGAGCTCACCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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3UTR-3UTR GCA 90 bp | CCCCCAGCCGGGGGAAATAAACCAGACTACACAGGGCAGAGGAAGACTTCAAACCTTCCAGCACCTTCCTaGTGCCAGCCTGGGATCCAC | + |
Preference number: 2 (lower is better) Translates to: PPAGGNKPDYTGQRKTSNLPAPS*CQPGIH Trigger: GTGGATCCCAGGCTGGCAGCAGGAAGGTGCTGGAAG...GTTTGAAGTCTTCCTCTGCCCTGTGTAGTCTGGTTTATTTCCCCCGGCTGGGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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3UTR-3UTR CCA 90 bp | CAGAAGTGGCCGCTTAAGGCAAAAGGCAAGCTGCAGATGTGTGACCACCCCTGGGTAGGGGGCAGGGATTaGGGGCTAGAAGGGCATGTA | + |
Preference number: 2 (lower is better) Translates to: QKWPLKAKGKLQMCDHPWVGGRD*GLEGHV Trigger: TACATGCCCTTCTAGCCCCCAATCCCTGCCCCCTAC...CCAGGGGTGGTCACACATCTGCAGCTTGCCTTTTGCCTTAAGCGGCCACTTCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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3UTR-3UTR CCA 90 bp | AAGTTCCACTGTGCTGGAAGAGGCCCAAGTTGGTGGAAGGAGAGGCAGAAGTGCGCAGCACGTCTGTCTTaGGAAGGGCAGCTGCCACAG | + |
Preference number: 2 (lower is better) Translates to: KFHCAGRGPSWWKERQKCAARLS*EGQLPQ Trigger: CTGTGGCAGCTGCCCTTCCCAAGACAGACGTGCTGC...GCACTTCTGCCTCTCCTTCCACCAACTTGGGCCTCTTCCAGCACAGTGGAACTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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3UTR-3UTR CCA 90 bp | GTTCCACTGTGCTGGAAGAGGCCCAAGTTGGTGGAAGGAGAGGCAGAAGTGCAACTTGGGGCAGGAACATaGCCACAGGAGGACTCGGAA | + |
Preference number: 2 (lower is better) Translates to: VPLCWKRPKLVEGEAEVQLGAGT*PQEDSE Trigger: TTCCGAGTCCTCCTGTGGCCATGTTCCTGCCCCAAG...TTGCACTTCTGCCTCTCCTTCCACCAACTTGGGCCTCTTCCAGCACAGTGGAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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3UTR-3UTR CCA 90 bp | CTGGGGCCTCAGTGGCTGGGTGGAGGTTGGGTGTGCTCTCTATTCTGTAGCAGACAAGTTCCACTGTGCTaGAAGAGGCCCAAGTTGGTG | + |
Preference number: 2 (lower is better) Translates to: LGPQWLGGGWVCSLFCSRQVPLC*KRPKLV Trigger: CACCAACTTGGGCCTCTTCCAGCACAGTGGAACTTG...TCTGCTACAGAATAGAGAGCACACCCAACCTCCACCCAGCCACTGAGGCCCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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3UTR-3UTR TCA 90 bp | AAGTTCCACTGTGCTGGAAGAGGCCCAAGTTGGTGGAAGGAGAGGCAGAAGTGCGATTCTGAAGAGCTCTaGCTGGGTCTCCTGGCCACT | + |
Preference number: 2 (lower is better) Translates to: KFHCAGRGPSWWKERQKCDSEEL*LGLLAT Trigger: AGTGGCCAGGAGACCCAGTCAGAGCTCTTCAGAATC...GCACTTCTGCCTCTCCTTCCACCAACTTGGGCCTCTTCCAGCACAGTGGAACTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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3UTR CAA 90 bp | GGTAAGAAACAGAGCAAGCCCAGAGCAGCCTGCCACTCTGACCACTaGGCAAACCAGGCTCTTCGAGACGTGAACAAAGCCCCTCTGTTA | + |
Preference number: 2 (lower is better) Translates to: GKKQSKPRAACHSDH*ANQALRDVNKAPLL Trigger: TAACAGAGGGGCTTTGTTCACGTCTCGAAGAGCCTGGTTTGCCAAGTGGTCAGAGTGGCAGGCTGCTCTGGGCTTGCTCTGTTTCTTACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
||
3UTR-3UTR TCA 90 bp | AGGGGGCAGGGATTGGGGGCTAGAAGGGCATGTATGCTTGAAACTACTCTAGTCCCTATCCCTGTGCAATaGCCCTTTCCCTCTGCAGGA | + |
Preference number: 2 (lower is better) Translates to: RGQGLGARRACMLETTLVPIPVQ*PFPSAG Trigger: TCCTGCAGAGGGAAAGGGTCATTGCACAGGGATAGG...GACTAGAGTAGTTTCAAGCATACATGCCCTTCTAGCCCCCAATCCCTGCCCCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
||
3UTR-3UTR TCA 90 bp | AAGTTCCACTGTGCTGGAAGAGGCCCAAGTTGGTGGAAGGAGAGGCAGAAGTGCATCCTGTCGCTCAGCTaGAAGACACCACAGTACCCT | + |
Preference number: 2 (lower is better) Translates to: KFHCAGRGPSWWKERQKCILSLS*KTPQYP Trigger: AGGGTACTGTGGTGTCTTTCAGCTGAGCGACAGGAT...GCACTTCTGCCTCTCCTTCCACCAACTTGGGCCTCTTCCAGCACAGTGGAACTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
||
3UTR-3UTR GCA 90 bp | AGGGGGCAGGGATTGGGGGCTAGAAGGGCATGTATGCTTGAAACTACTCTAGTCGTGGCCTTTCATGGCTaGGAAGCCCAGAAAGGAGCT | + |
Preference number: 2 (lower is better) Translates to: RGQGLGARRACMLETTLVVAFHG*EAQKGA Trigger: AGCTCCTTTCTGGGCTTCGCAGCCATGAAAGGCCAC...GACTAGAGTAGTTTCAAGCATACATGCCCTTCTAGCCCCCAATCCCTGCCCCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
||
3UTR-3UTR CCA 90 bp | AAGTTCCACTGTGCTGGAAGAGGCCCAAGTTGGTGGAAGGAGAGGCAGAAGTGCGGCAGCAATGGAGTCTaGTTCTGTACAGGGCAACAG | + |
Preference number: 2 (lower is better) Translates to: KFHCAGRGPSWWKERQKCGSNGV*FCTGQQ Trigger: CTGTTGCCCTGTACAGAACCAGACTCCATTGCTGCC...GCACTTCTGCCTCTCCTTCCACCAACTTGGGCCTCTTCCAGCACAGTGGAACTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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3UTR-3UTR CCA 90 bp | GCTGTCTCCTTCATAGCACATGTACAGGACAGAACAGCTCCTACAGGTAAGGTGGCTGGGGAGGCAGCTTaGAGGCTGACGCTTGCCTAT | + |
Preference number: 2 (lower is better) Translates to: AVSFIAHVQDRTAPTGKVAGEAA*RLTLAY Trigger: ATAGGCAAGCGTCAGCCTCCAAGCTGCCTCCCCAGC...CACCTTACCTGTAGGAGCTGTTCTGTCCTGTACATGTGCTATGAAGGAGACAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
||
3UTR-3UTR GCA 90 bp | AGGGGGCAGGGATTGGGGGCTAGAAGGGCATGTATGCTTGAAACTACTCTAGTCCTGACCCTATCCCTGTaGAATGACCCTTTCCCTCTG | + |
Preference number: 2 (lower is better) Translates to: RGQGLGARRACMLETTLVLTLSL*NDPFPL Trigger: CAGAGGGAAAGGGTCATTGCACAGGGATAGGGTCAG...GACTAGAGTAGTTTCAAGCATACATGCCCTTCTAGCCCCCAATCCCTGCCCCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
||
3UTR-3UTR CCA 90 bp | GAAGCCCAGAAAGGAGCTGACCGCACAGCCAATTTCTCTGACAGAAATGTCTCCGGCAACAGGGCTGTGTaGCCACAGTCATACAGGACA | + |
Preference number: 2 (lower is better) Translates to: EAQKGADRTANFSDRNVSGNRAV*PQSYRT Trigger: TGTCCTGTATGACTGTGGCCACACAGCCCTGTTGCC...GGAGACATTTCTGTCAGAGAAATTGGCTGTGCGGTCAGCTCCTTTCTGGGCTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
||
3UTR-3UTR TCA 90 bp | AAACCAGACTACACAGGGCAGAGGAAGACTTCAAACGAGTCCTTACAGGAGCAGAGGAACTTTGTCTCCTaGGACCTGGTGGCCTCTGTG | + |
Preference number: 2 (lower is better) Translates to: KPDYTGQRKTSNESLQEQRNFVS*DLVASV Trigger: CACAGAGGCCACCAGGTCTCAGGAGACAAAGTTCCT...CTGCTCCTGTAAGGACTCGTTTGAAGTCTTCCTCTGCCCTGTGTAGTCTGGTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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3UTR-3UTR TCA 90 bp | CCCCCAGCCGGGGGAAATAAACCAGACTACACAGGGCAGAGGAAGACTTCAAACAAGGGCATGTATGCTTaGAACTACTCTAGTCACCTC | + |
Preference number: 2 (lower is better) Translates to: PPAGGNKPDYTGQRKTSNKGMYA*NYSSHL Trigger: GAGGTGACTAGAGTAGTTTCAAGCATACATGCCCTT...GTTTGAAGTCTTCCTCTGCCCTGTGTAGTCTGGTTTATTTCCCCCGGCTGGGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
||
3UTR-3UTR CCA 90 bp | GAAGCCCAGAAAGGAGCTGACCGCACAGCCAATTTCTCTGACAGAAATGTCTCCGGAGAAAGGCAGCAATaGAGTCTGGTTCTGTACAGG | + |
Preference number: 2 (lower is better) Translates to: EAQKGADRTANFSDRNVSGERQQ*SLVLYR Trigger: CCTGTACAGAACCAGACTCCATTGCTGCCTTTCTCC...GGAGACATTTCTGTCAGAGAAATTGGCTGTGCGGTCAGCTCCTTTCTGGGCTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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3UTR-3UTR GCA 90 bp | AAACCAGACTACACAGGGCAGAGGAAGACTTCAAACGAGTCCTTACAGGAGCAGTGGGTGAGCTATGGCTaGGTTTGTCAGGAAGAGACA | + |
Preference number: 2 (lower is better) Translates to: KPDYTGQRKTSNESLQEQWVSYG*VCQEET Trigger: TGTCTCTTCCTGACAAACGCAGCCATAGCTCACCCA...CTGCTCCTGTAAGGACTCGTTTGAAGTCTTCCTCTGCCCTGTGTAGTCTGGTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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3UTR-3UTR GCA 90 bp | AGTGTGTGTGTGTGGCATCACAATGCTCTACTTATAAAGTTGTCCCCTCCCCCAAGGCAAAAGGCAAGCTaGAGATGTGTGACCACCCCT | + |
Preference number: 2 (lower is better) Translates to: SVCVWHHNALLIKLSPPPRQKAS*RCVTTP Trigger: AGGGGTGGTCACACATCTGCAGCTTGCCTTTTGCCT...TGGGGGAGGGGACAACTTTATAAGTAGAGCATTGTGATGCCACACACACACACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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3UTR-3UTR CCA 90 bp | AGTGTGTGTGTGTGGCATCACAATGCTCTACTTATAAAGTTGTCCCCTCCCCCAACCTCTGCTCTTCAGTaGCCTTTCATGGCTGCGAAG | + |
Preference number: 2 (lower is better) Translates to: SVCVWHHNALLIKLSPPPTSALQ*PFMAAK Trigger: CTTCGCAGCCATGAAAGGCCACTGAAGAGCAGAGGT...TGGGGGAGGGGACAACTTTATAAGTAGAGCATTGTGATGCCACACACACACACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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3UTR GCA 72 bp | GCACAGGAGGGGCTCTGCCACCTCGCACACGGGCAGTaGTGGCCAAGTCACCGCAGGCCTGCCGCAGGAGCC | + |
Preference number: 3 (lower is better) Translates to: AQEGLCHLAHGQ*WPSHRRPAAGA Trigger: GGCTCCTGCGGCAGGCCTGCGGTGACTTGGCCAGCACTGCCCGTGTGCGAGGTGGCAGAGCCCCTCCTGTGC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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3UTR TCA 72 bp | TCCACCCTCAGCACCACACCCAGGAGACAGTGCAAGTaGAGGCCCTGTGTCCCTGGCCTATGGAACGAGGGG | + |
Preference number: 3 (lower is better) Translates to: STLSTTPRRQCK*RPCVPGLWNEG Trigger: CCCCTCGTTCCATAGGCCAGGGACACAGGGCCTTCACTTGCACTGTCTCCTGGGTGTGGTGCTGAGGGTGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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3UTR CCA 72 bp | AACCCATCTGGCTTGGCTGTGTGGGCCACGGTGCCATaGCCCGTGCCATCTGCTGCTTCAAGCAAGAGCCCA | + |
Preference number: 3 (lower is better) Translates to: NPSGLAVWATVP*PVPSAASSKSP Trigger: TGGGCTCTTGCTTGAAGCAGCAGATGGCACGGGCCATGGCACCGTGGCCCACACAGCCAAGCCAGATGGGTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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3UTR-3UTR CAA 90 bp | ACAGCACAAGCTCGGCTCGGCCAGGCACAGGCTGGTGCTCCTCTTCTGTTCCAGCCTGGGAGAGGAACTTaGTCTCCTGAGACCTGGTGG | + |
Preference number: 3 (lower is better) Translates to: TAQARLGQAQAGAPLLFQPGRGT*SPETWW Trigger: CCACCAGGTCTCAGGAGACAAAGTTCCTCTCCCAGG...CTGGAACAGAAGAGGAGCACCAGCCTGTGCCTGGCCGAGCCGAGCTTGTGCTGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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3UTR-3UTR CAA 90 bp | CAGAAGTGGCCGCTTAAGGCAAAAGGCAAGCTGCAGATGTGTGACCACCCCTGGAGCTCCCCTGGGCACTaGTGCATGGGGAGAGGCCTC | + |
Preference number: 3 (lower is better) Translates to: QKWPLKAKGKLQMCDHPWSSPGH*CMGRGL Trigger: GAGGCCTCTCCCCATGCACAAGTGCCCAGGGGAGCT...CCAGGGGTGGTCACACATCTGCAGCTTGCCTTTTGCCTTAAGCGGCCACTTCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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3UTR TCA 72 bp | GGAGAGGGCAGGCCCTCAGGTCTGATCCTCTGCAGTTaGCCAGTCCAAGTTCCACTGTGCTGGAAGAGGCCC | + |
Preference number: 3 (lower is better) Translates to: GEGRPSGLILCS*PVQVPLCWKRP Trigger: GGGCCTCTTCCAGCACAGTGGAACTTGGACTGGTCAACTGCAGAGGATCAGACCTGAGGGCCTGCCCTCTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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3UTR GCA 72 bp | TGTGTGGGCCACGGTGCCATGGCCCGTGCCATCTGCTaGTTCAAGCAAGAGCCCATGGGTAGTGTCTCCATC | + |
Preference number: 3 (lower is better) Translates to: CVGHGAMARAIC*FKQEPMGSVSI Trigger: GATGGAGACACTACCCATGGGCTCTTGCTTGAAGCAGCAGATGGCACGGGCCATGGCACCGTGGCCCACACA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
||
3UTR CCA 72 bp | GTTGGACAAATGCCAACAGGGCTTGGGGCAGGAACATaGCCACAGGAGGACTCGGAACTCTGGCCAGGGCAG | + |
Preference number: 3 (lower is better) Translates to: VGQMPTGLGAGT*PQEDSELWPGQ Trigger: CTGCCCTGGCCAGAGTTCCGAGTCCTCCTGTGGCCATGTTCCTGCCCCAAGCCCTGTTGGCATTTGTCCAAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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3UTR GCA 72 bp | CAGAGCAGAAGTGGCCGCTTAAGGCAAAAGGCAAGCTaGAGATGTGTGACCACCCCTGGCTCCCAGGGCTGT | + |
Preference number: 3 (lower is better) Translates to: QSRSGRLRQKAS*RCVTTPGSQGC Trigger: ACAGCCCTGGGAGCCAGGGGTGGTCACACATCTGCAGCTTGCCTTTTGCCTTAAGCGGCCACTTCTGCTCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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3UTR CCA 72 bp | GGGGCAGGAACATGGCCACAGGAGGACTCGGAACTCTaGCCAGGGCAGGGTGGCAAAACAGTAACACTAAGC | + |
Preference number: 3 (lower is better) Translates to: GAGTWPQEDSEL*PGQGGKTVTLS Trigger: GCTTAGTGTTACTGTTTTGCCACCCTGCCCTGGCCAGAGTTCCGAGTCCTCCTGTGGCCATGTTCCTGCCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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3UTR-3UTR CAA 90 bp | AGGGGGCAGGGATTGGGGGCTAGAAGGGCATGTATGCTTGAAACTACTCTAGTCAGCTGGGGAGGCAGCTaGGAGGCTGACGCTTGCCTA | + |
Preference number: 3 (lower is better) Translates to: RGQGLGARRACMLETTLVSWGGS*EADACL Trigger: TAGGCAAGCGTCAGCCTCCAAGCTGCCTCCCCAGCT...GACTAGAGTAGTTTCAAGCATACATGCCCTTCTAGCCCCCAATCCCTGCCCCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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3UTR TCA 72 bp | CGGCTAGGCTTGGAGACTGACCCTATCCCTGTGCAATaGCCCTTTCCCTCTGCAGGAAGGATGGCTGTCTCC | + |
Preference number: 3 (lower is better) Translates to: RLGLETDPIPVQ*PFPSAGRMAVS Trigger: GGAGACAGCCATCCTTCCTGCAGAGGGAAAGGGTCATTGCACAGGGATAGGGTCAGTCTCCAAGCCTAGCCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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3UTR TCA 72 bp | CCCTCTGTTAGGTGGGAGAGGGCAGGCCCTCAGGTCTaGTCCTCTGCAGTTGACCAGTCCAAGTTCCACTGT | + |
Preference number: 3 (lower is better) Translates to: PSVRWERAGPQV*SSAVDQSKFHC Trigger: ACAGTGGAACTTGGACTGGTCAACTGCAGAGGATCAGACCTGAGGGCCTGCCCTCTCCCACCTAACAGAGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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3UTR CCA 72 bp | GAGGAGGAGGAGGAGGAGAAAGGCAGCAATGGAGTCTaGTTCTGTACAGGGCAACAGGGCTGTGTGGCCACA | + |
Preference number: 3 (lower is better) Translates to: EEEEEEKGSNGV*FCTGQQGCVAT Trigger: TGTGGCCACACAGCCCTGTTGCCCTGTACAGAACCAGACTCCATTGCTGCCTTTCTCCTCCTCCTCCTCCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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3UTR CCA 72 bp | AGACCTGGTGGCCTCTGTGCAGGTGTGTTAGGTGCCTaGTCTGTGGGGATTCTGAAGAGCTCTGACTGGGTC | + |
Preference number: 3 (lower is better) Translates to: RPGGLCAGVLGA*SVGILKSSDWV Trigger: GACCCAGTCAGAGCTCTTCAGAATCCCCACAGACCAGGCACCTAACACACCTGCACAGAGGCCACCAGGTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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3UTR CCA 72 bp | CTTATGGGGGTACCAAGTGCCCCTGCTGAGGGAGGCTaGCAATCCTGTCGCTCAGCTGAAAGACACCACAGT | + |
Preference number: 3 (lower is better) Translates to: LMGVPSAPAEGG*QSCRSAERHHS Trigger: ACTGTGGTGTCTTTCAGCTGAGCGACAGGATTGCCAGCCTCCCTCAGCAGGGGCACTTGGTACCCCCATAAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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3UTR TCA 72 bp | CACAGTACCCTAGACTCTGCCATGGGAACTGCTGTCTaGGCTTCAGGAGCAGCATGTCGCCTGCATGGACAG | + |
Preference number: 3 (lower is better) Translates to: HSTLDSAMGTAV*ASGAACRLHGQ Trigger: CTGTCCATGCAGGCGACATGCTGCTCCTGAAGCTCAGACAGCAGTTCCCATGGCAGAGTCTAGGGTACTGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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3UTR GCA 72 bp | GTTTGGCAAACACCTGCCATAAAGGCTGTCCTTGTATaGCGTGACCTTGAGGGAGCCAGTGCCGGAACCAGG | + |
Preference number: 3 (lower is better) Translates to: VWQTPAIKAVLV*RDLEGASAGTR Trigger: CCTGGTTCCGGCACTGGCTCCCTCAAGGTCACGGCATACAAGGACAGCCTTTATGGCAGGTGTTTGCCAAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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3UTR CCA 72 bp | TTCCCTGGGAGAGGAACTTTGTCTCCTGAGACCTGGTaGCCTCTGTGCAGGTGTGTTAGGTGCCTGGTCTGT | + |
Preference number: 3 (lower is better) Translates to: FPGRGTLSPETW*PLCRCVRCLVC Trigger: ACAGACCAGGCACCTAACACACCTGCACAGAGGCCACCAGGTCTCAGGAGACAAAGTTCCTCTCCCAGGGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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3UTR TCA 72 bp | TGCTTCAAGCAAGAGCCCATGGGTAGTGTCTCCATCTaGGCCACTGTCACGGGGCAGTCATCACCTGAAACC | + |
Preference number: 3 (lower is better) Translates to: CFKQEPMGSVSI*ATVTGQSSPET Trigger: GGTTTCAGGTGATGACTGCCCCGTGACAGTGGCTCAGATGGAGACACTACCCATGGGCTCTTGCTTGAAGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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3UTR TCA 72 bp | CCACTCCCGATGGCATCACTGGCACCTTTGTCTTCATaGGTTGGACAAATGCCAACAGGGCTTGGGGCAGGA | + |
Preference number: 3 (lower is better) Translates to: PLPMASLAPLSS*VGQMPTGLGAG Trigger: TCCTGCCCCAAGCCCTGTTGGCATTTGTCCAACTCATGAAGACAAAGGTGCCAGTGATGCCATCGGGAGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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3UTR GCA 72 bp | CATGACACTCTGAAGGCAGAGTGGGTGAGCTATGGCTaGGTTTGTCAGGAAGAGACACCACCGGCTAGGCTT | + |
Preference number: 3 (lower is better) Translates to: HDTLKAEWVSYG*VCQEETPPARL Trigger: AAGCCTAGCCGGTGGTGTCTCTTCCTGACAAACGCAGCCATAGCTCACCCACTCTGCCTTCAGAGTGTCATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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3UTR GCA 72 bp | CTCCCCTGGGCACTTGTGCATGGGGAGAGGCCTCAATaGCAAGATCTGAGATCATGCCACAAACCCACTAGA | + |
Preference number: 3 (lower is better) Translates to: LPWALVHGERPQ*QDLRSCHKPTR Trigger: TCTAGTGGGTTTGTGGCATGATCTCAGATCTTGGCATTGAGGCCTCTCCCCATGCACAAGTGCCCAGGGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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3UTR GCA 72 bp | TCTAGTCACCTCTGCTCTTCAGTGGCCTTTCATGGCTaGGAAGCCCAGAAAGGAGCTGACCGCACAGCCAAT | + |
Preference number: 3 (lower is better) Translates to: SSHLCSSVAFHG*EAQKGADRTAN Trigger: ATTGGCTGTGCGGTCAGCTCCTTTCTGGGCTTCGCAGCCATGAAAGGCCACTGAAGAGCAGAGGTGACTAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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3UTR GCA 72 bp | AAGACACCACAGTACCCTAGACTCTGCCATGGGAACTaGTGTCTGAGCTTCAGGAGCAGCATGTCGCCTGCA | + |
Preference number: 3 (lower is better) Translates to: KTPQYPRLCHGN*CLSFRSSMSPA Trigger: TGCAGGCGACATGCTGCTCCTGAAGCTCAGACAGCAGTTCCCATGGCAGAGTCTAGGGTACTGTGGTGTCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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3UTR CCA 72 bp | GGTGCCTGGTCTGTGGGGATTCTGAAGAGCTCTGACTaGGTCTCCTGGCCACTATGTGTGGATTTGTCCATG | + |
Preference number: 3 (lower is better) Translates to: GAWSVGILKSSD*VSWPLCVDLSM Trigger: CATGGACAAATCCACACATAGTGGCCAGGAGACCCAGTCAGAGCTCTTCAGAATCCCCACAGACCAGGCACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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3UTR CCA 72 bp | CCAGTGCCGGAACCAGGCCACTCCCGATGGCATCACTaGCACCTTTGTCTTCATGAGTTGGACAAATGCCAA | + |
Preference number: 3 (lower is better) Translates to: PVPEPGHSRWHH*HLCLHELDKCQ Trigger: TTGGCATTTGTCCAACTCATGAAGACAAAGGTGCCAGTGATGCCATCGGGAGTGGCCTGGTTCCGGCACTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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3UTR CCA 72 bp | AGTACAGGCTCTTCATCAACCACACTGAAGCTGACTTaGTGGCACCCAAGGCTACTGCTGAGGAGCTGGGAG | + |
Preference number: 3 (lower is better) Translates to: STGSSSTTLKLT*WHPRLLLRSWE Trigger: CTCCCAGCTCCTCAGCAGTAGCCTTGGGTGCCACCAAGTCAGCTTCAGTGTGGTTGATGAAGAGCCTGTACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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3UTR-3UTR CAA 90 bp | AGGGGGCAGGGATTGGGGGCTAGAAGGGCATGTATGCTTGAAACTACTCTAGTCGAGCTATGGCTGCGTTaGTCAGGAAGAGACACCACC | + |
Preference number: 3 (lower is better) Translates to: RGQGLGARRACMLETTLVELWLR*SGRDTT Trigger: GGTGGTGTCTCTTCCTGACAAACGCAGCCATAGCTC...GACTAGAGTAGTTTCAAGCATACATGCCCTTCTAGCCCCCAATCCCTGCCCCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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3UTR-3UTR CAA 90 bp | CAGAAGTGGCCGCTTAAGGCAAAAGGCAAGCTGCAGATGTGTGACCACCCCTGGCAGCCCACTTGTTTTTaGAGCTGGTATTCCCTGGGA | + |
Preference number: 3 (lower is better) Translates to: QKWPLKAKGKLQMCDHPWQPTCF*SWYSLG Trigger: TCCCAGGGAATACCAGCTCAAAAAACAAGTGGGCTG...CCAGGGGTGGTCACACATCTGCAGCTTGCCTTTTGCCTTAAGCGGCCACTTCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
||
3UTR TCA 72 bp | ACTGGGTCTCCTGGCCACTATGTGTGGATTTGTCCATaGCACTCTGAAGGCAGAGTGGGTGAGCTATGGCTG | + |
Preference number: 3 (lower is better) Translates to: TGSPGHYVWICP*HSEGRVGELWL Trigger: CAGCCATAGCTCACCCACTCTGCCTTCAGAGTGTCATGGACAAATCCACACATAGTGGCCAGGAGACCCAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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3UTR TCA 72 bp | GTTAGGTGCCTGGTCTGTGGGGATTCTGAAGAGCTCTaGCTGGGTCTCCTGGCCACTATGTGTGGATTTGTC | + |
Preference number: 3 (lower is better) Translates to: VRCLVCGDSEEL*LGLLATMCGFV Trigger: GACAAATCCACACATAGTGGCCAGGAGACCCAGTCAGAGCTCTTCAGAATCCCCACAGACCAGGCACCTAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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3UTR GCA 72 bp | GAACTGCTGTCTGAGCTTCAGGAGCAGCATGTCGCCTaGATGGACAGCCTAGTCTGTGTGCACATGTCATGT | + |
Preference number: 3 (lower is better) Translates to: ELLSELQEQHVA*MDSLVCVHMSC Trigger: ACATGACATGTGCACACAGACTAGGCTGTCCATGCAGGCGACATGCTGCTCCTGAAGCTCAGACAGCAGTTC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
||
3UTR CCA 72 bp | CCCGATGGCATCACTGGCACCTTTGTCTTCATGAGTTaGACAAATGCCAACAGGGCTTGGGGCAGGAACATG | + |
Preference number: 3 (lower is better) Translates to: PDGITGTFVFMS*TNANRAWGRNM Trigger: CATGTTCCTGCCCCAAGCCCTGTTGGCATTTGTCCAACTCATGAAGACAAAGGTGCCAGTGATGCCATCGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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3UTR CCA 72 bp | TTTGTCTTCATGAGTTGGACAAATGCCAACAGGGCTTaGGGCAGGAACATGGCCACAGGAGGACTCGGAACT | + |
Preference number: 3 (lower is better) Translates to: FVFMSWTNANRA*GRNMATGGLGT Trigger: AGTTCCGAGTCCTCCTGTGGCCATGTTCCTGCCCCAAGCCCTGTTGGCATTTGTCCAACTCATGAAGACAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
||
3UTR CCA 72 bp | TGGATGGATACCTGCAGCCTAGTGACACAGAACTTATaGGTAAGAAACAGAGCAAGCCCAGAGCAGCCTGCC | + |
Preference number: 3 (lower is better) Translates to: WMDTCSLVTQNL*VRNRASPEQPA Trigger: GGCAGGCTGCTCTGGGCTTGCTCTGTTTCTTACCCATAAGTTCTGTGTCACTAGGCTGCAGGTATCCATCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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3UTR-3UTR CAA 90 bp | AGTGTGTGTGTGTGGCATCACAATGCTCTACTTATAAAGTTGTCCCCTCCCCCAAAATGCCAACAGGGCTaGGGGCAGGAACATGGCCAC | + |
Preference number: 3 (lower is better) Translates to: SVCVWHHNALLIKLSPPPKCQQG*GQEHGH Trigger: GTGGCCATGTTCCTGCCCCAAGCCCTGTTGGCATTT...TGGGGGAGGGGACAACTTTATAAGTAGAGCATTGTGATGCCACACACACACACT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
||
3UTR CCA 72 bp | ATGCTTGAAACTACTCTAGTCACCTCTGCTCTTCAGTaGCCTTTCATGGCTGCGAAGCCCAGAAAGGAGCTG | + |
Preference number: 3 (lower is better) Translates to: MLETTLVTSALQ*PFMAAKPRKEL Trigger: CAGCTCCTTTCTGGGCTTCGCAGCCATGAAAGGCCACTGAAGAGCAGAGGTGACTAGAGTAGTTTCAAGCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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3UTR CCA 72 bp | ATGTGTGGATTTGTCCATGACACTCTGAAGGCAGAGTaGGTGAGCTATGGCTGCGTTTGTCAGGAAGAGACA | + |
Preference number: 3 (lower is better) Translates to: MCGFVHDTLKAE*VSYGCVCQEET Trigger: TGTCTCTTCCTGACAAACGCAGCCATAGCTCACCCACTCTGCCTTCAGAGTGTCATGGACAAATCCACACAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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3UTR TCA 72 bp | GATTCTAGAGATTGGTCCTCAAACTTAAAATCCTCCTaGGTGGTGGGACACTCAGCGAGTGTGTGTGTGTGG | + |
Preference number: 3 (lower is better) Translates to: DSRDWSSNLKSS*VVGHSASVCVW Trigger: CCACACACACACACTCGCTGAGTGTCCCACCACTCAGGAGGATTTTAAGTTTGAGGACCAATCTCTAGAATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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3UTR CCA 72 bp | CACATGTACAGGACAGAACAGCTCCTACAGGTAAGGTaGCCCTATAATTATCAACGGTGTGAATCCCAGAGG | + |
Preference number: 3 (lower is better) Translates to: HMYRTEQLLQVR*PYNYQRCESQR Trigger: CCTCTGGGATTCACACCGTTGATAATTATAGGGCCACCTTACCTGTAGGAGCTGTTCTGTCCTGTACATGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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3UTR CCA 72 bp | CTCATCAGTGTAGAACCTTTAATAACAGAGCAGAAGTaGCCGCTTAAGGCAAAAGGCAAGCTGCAGATGTGT | + |
Preference number: 3 (lower is better) Translates to: LISVEPLITEQK*PLKAKGKLQMC Trigger: ACACATCTGCAGCTTGCCTTTTGCCTTAAGCGGCCACTTCTGCTCTGTTATTAAAGGTTCTACACTGATGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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3UTR CCA 72 bp | CATCAGTGTGAAGCAGGCTTTGTGCTAACATTTATTTaGGGACAGGTAAGTACAGGCTCTTCATCAACCACA | + |
Preference number: 3 (lower is better) Translates to: HQCEAGFVLTFI*GQVSTGSSSTT Trigger: TGTGGTTGATGAAGAGCCTGTACTTACCTGTCCCCAAATAAATGTTAGCACAAAGCCTGCTTCACACTGATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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3UTR CAA 72 bp | GCAGGCCTGCCGCAGGAGCCAGGTAACCCATCTGGCTaGGCTGTGTGGGCCACGGTGCCATGGCCCGTGCCA | + |
Preference number: 4 (lower is better) Translates to: AGLPQEPGNPSG*AVWATVPWPVP Trigger: TGGCACGGGCCATGGCACCGTGGCCCACACAGCCAAGCCAGATGGGTTACCTGGCTCCTGCGGCAGGCCTGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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CDS-3UTR GCA 90 bp | ACAGCACAAGCTCGGCTCGGCCAGGCACAGGCTGGTGCTCCTCTTCTGTTCCAGCGAGAGGCAGCGCTCTaGTTCCAGGCTGTACACCAG | + |
Preference number: 4 (lower is better) Translates to: TAQARLGQAQAGAPLLFQREAAL*FQAVHQ Trigger: CTGGTGTACAGCCTGGAAGCAGAGCGCTGCCTCTCG...CTGGAACAGAAGAGGAGCACCAGCCTGTGCCTGGCCGAGCCGAGCTTGTGCTGT 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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CDS-3UTR GCA 90 bp | TTGGGGCAGGAACATGGCCACAGGAGGACTCGGAACTCTGGCCAGGGCAGGGTGGTCATCCATCTGGACTaGGGACACCCCCAGCTGATG | + |
Preference number: 4 (lower is better) Translates to: LGQEHGHRRTRNSGQGRVVIHLD*GHPQLM Trigger: CATCAGCTGGGGGTGTCCGCAGTCCAGATGGATGAC...CACCCTGCCCTGGCCAGAGTTCCGAGTCCTCCTGTGGCCATGTTCCTGCCCCAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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CDS-3UTR TCA 90 bp | AAGTTCCACTGTGCTGGAAGAGGCCCAAGTTGGTGGAAGGAGAGGCAGAAGTGCGCGGACACCCCCAGCTaGTGGGCAGACAGCGACAGG | + |
Preference number: 4 (lower is better) Translates to: KFHCAGRGPSWWKERQKCADTPS*WADSDR Trigger: CCTGTCGCTGTCTGCCCATCAGCTGGGGGTGTCCGC...GCACTTCTGCCTCTCCTTCCACCAACTTGGGCCTCTTCCAGCACAGTGGAACTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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CDS-3UTR GCA 90 bp | TTGGGGCAGGAACATGGCCACAGGAGGACTCGGAACTCTGGCCAGGGCAGGGTGCGCTCACGGCACCTTTaGGATTCTTCCAGTTGGCTC | + |
Preference number: 4 (lower is better) Translates to: LGQEHGHRRTRNSGQGRVRSRHL*DSSSWL Trigger: GAGCCAACTGGAAGAATCGCAAAGGTGCCGTGAGCG...CACCCTGCCCTGGCCAGAGTTCCGAGTCCTCCTGTGGCCATGTTCCTGCCCCAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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CDS-3UTR CCA 90 bp | GGAGGTGAGCTCCCCTGGGCACTTGTGCATGGGGAGAGGCCTCAATGCCAAGATCCAGATCCCCGGCTGTaGCTATTGCCACAGGGTACC | + |
Preference number: 4 (lower is better) Translates to: GGELPWALVHGERPQCQDPDPRL*LLPQGT Trigger: GGTACCCTGTGGCAATAGCCACAGCCGGGGATCTGG...ATCTTGGCATTGAGGCCTCTCCCCATGCACAAGTGCCCAGGGGAGCTCACCTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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3UTR CAA 72 bp | GGGAGAGGGCAGGCCCTCAGGTCTGATCCTCTGCAGTaGACCAGTCCAAGTTCCACTGTGCTGGAAGAGGCC | + |
Preference number: 4 (lower is better) Translates to: GRGQALRSDPLQ*TSPSSTVLEEA Trigger: GGCCTCTTCCAGCACAGTGGAACTTGGACTGGTCAACTGCAGAGGATCAGACCTGAGGGCCTGCCCTCTCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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CDS-3UTR TCA 90 bp | GTTCCACTGTGCTGGAAGAGGCCCAAGTTGGTGGAAGGAGAGGCAGAAGTGCAAAAGTCGCGGATGAGCTaGTCCACCAGCGGCTCGGGC | + |
Preference number: 4 (lower is better) Translates to: VPLCWKRPKLVEGEAEVQKSRMS*STSGSG Trigger: GCCCGAGCCGCTGGTGGATCAGCTCATCCGCGACTT...TTGCACTTCTGCCTCTCCTTCCACCAACTTGGGCCTCTTCCAGCACAGTGGAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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CDS-3UTR TCA 90 bp | CTGGGGCCTCAGTGGCTGGGTGGAGGTTGGGTGTGCTCTCTATTCTGTAGCAGAACAGGAAGGGGGCTCTaGAAGGCCAGCTGGTCCACA | + |
Preference number: 4 (lower is better) Translates to: LGPQWLGGGWVCSLFCSRTGRGL*KASWST Trigger: TGTGGACCAGCTGGCCTTTCAGAGCCCCCTTCCTGT...TCTGCTACAGAATAGAGAGCACACCCAACCTCCACCCAGCCACTGAGGCCCCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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CDS-3UTR GCA 90 bp | CCCCCAGCCGGGGGAAATAAACCAGACTACACAGGGCAGAGGAAGACTTCAAACCCACGTAGTCCCAGGTaGGGGTGTCCCACACCCGCA | + |
Preference number: 4 (lower is better) Translates to: PPAGGNKPDYTGQRKTSNPRSPR*GCPTPA Trigger: TGCGGGTGTGGGACACCCGCACCTGGGACTACGTGG...GTTTGAAGTCTTCCTCTGCCCTGTGTAGTCTGGTTTATTTCCCCCGGCTGGGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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CDS-3UTR TCA 90 bp | GGAGGTGAGCTCCCCTGGGCACTTGTGCATGGGGAGAGGCCTCAATGCCAAGATCATGTCTTGCTCACCTaGGCACACAGTCCCAGCTCT | + |
Preference number: 4 (lower is better) Translates to: GGELPWALVHGERPQCQDHVLLT*AHSPSS Trigger: AGAGCTGGGACTGTGTGCTCAGGTGAGCAAGACATG...ATCTTGGCATTGAGGCCTCTCCCCATGCACAAGTGCCCAGGGGAGCTCACCTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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CDS-3UTR TCA 90 bp | TTGGGGCAGGAACATGGCCACAGGAGGACTCGGAACTCTGGCCAGGGCAGGGTGATGACCACACCATCGTaGGAACGCACGTCACACAAA | + |
Preference number: 4 (lower is better) Translates to: LGQEHGHRRTRNSGQGRVMTTPS*ERTSHK Trigger: TTTGTGTGACGTGCGTTCTCACGATGGTGTGGTCAT...CACCCTGCCCTGGCCAGAGTTCCGAGTCCTCCTGTGGCCATGTTCCTGCCCCAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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CDS-3UTR TCA 90 bp | GACAAATGCCAACAGGGCTTGGGGCAGGAACATGGCCACAGGAGGACTCGGAACCCTCCTCGCCTCCACTaGCAACCTTCCAGTCATCCA | + |
Preference number: 4 (lower is better) Translates to: DKCQQGLGQEHGHRRTRNPPRLH*QPSSHP Trigger: TGGATGACTGGAAGGTTGTCAGTGGAGGCGAGGAGG...GTTCCGAGTCCTCCTGTGGCCATGTTCCTGCCCCAAGCCCTGTTGGCATTTGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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CDS-3UTR CCA 90 bp | ACAGCACAAGCTCGGCTCGGCCAGGCACAGGCTGGTGCTCCTCTTCTGTTCCAGCAAAGGCAACCTGGCTaGCTGAGACATCCAGACATG | + |
Preference number: 4 (lower is better) Translates to: TAQARLGQAQAGAPLLFQQRQPG*LRHPDM Trigger: CATGTCTGGATGTCTCAGCCAGCCAGGTTGCCTTTG...CTGGAACAGAAGAGGAGCACCAGCCTGTGCCTGGCCGAGCCGAGCTTGTGCTGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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CDS-3UTR GCA 90 bp | AGGGGGCAGGGATTGGGGGCTAGAAGGGCATGTATGCTTGAAACTACTCTAGTCCTCAGCGCCTGTGACTaGGCCAACTCCTCCTGCCAG | + |
Preference number: 4 (lower is better) Translates to: RGQGLGARRACMLETTLVLSACD*ANSSCQ Trigger: CTGGCAGGAGGAGTTGGCGCAGTCACAGGCGCTGAG...GACTAGAGTAGTTTCAAGCATACATGCCCTTCTAGCCCCCAATCCCTGCCCCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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CDS-3UTR GCA 90 bp | AAGTTCCACTGTGCTGGAAGAGGCCCAAGTTGGTGGAAGGAGAGGCAGAAGTGCACAGCGTCGGGAACATaGTCCAGCTCGCTCACGGCA | + |
Preference number: 4 (lower is better) Translates to: KFHCAGRGPSWWKERQKCTASGT*SSSLTA Trigger: TGCCGTGAGCGAGCTGGAGCATGTTCCCGACGCTGT...GCACTTCTGCCTCTCCTTCCACCAACTTGGGCCTCTTCCAGCACAGTGGAACTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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CDS-3UTR CCA 90 bp | AGCTGCCACAGCACAAGCTCGGCTCGGCCAGGCACAGGCTGGTGCTCCTCTTCTCACAAAGGAGACATATaGCTGCATTCCAGGATCCTC | + |
Preference number: 4 (lower is better) Translates to: SCHSTSSARPGTGWCSSSHKGDI*LHSRIL Trigger: GAGGATCCTGGAATGCAGCCATATGTCTCCTTTGTG...AGAAGAGGAGCACCAGCCTGTGCCTGGCCGAGCCGAGCTTGTGCTGTGGCAGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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CDS-3UTR CCA 90 bp | GTTCCACTGTGCTGGAAGAGGCCCAAGTTGGTGGAAGGAGAGGCAGAAGTGCAAAGCGCACAGGGTGCCTaGAGTGCACTTCCCACAGCT | + |
Preference number: 4 (lower is better) Translates to: VPLCWKRPKLVEGEAEVQSAQGA*SALPTA Trigger: AGCTGTGGGAAGTGCACTCCAGGCACCCTGTGCGCT...TTGCACTTCTGCCTCTCCTTCCACCAACTTGGGCCTCTTCCAGCACAGTGGAAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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3UTR CAA 72 bp | CAGAGCAAGCCCAGAGCAGCCTGCCACTCTGACCACTaGGCAAACCAGGCTCTTCGAGACGTGAACAAAGCC | + |
Preference number: 4 (lower is better) Translates to: QSKPRAACHSDH*ANQALRDVNKA Trigger: GGCTTTGTTCACGTCTCGAAGAGCCTGGTTTGCCAAGTGGTCAGAGTGGCAGGCTGCTCTGGGCTTGCTCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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CDS-3UTR TCA 90 bp | GACAAATGCCAACAGGGCTTGGGGCAGGAACATGGCCACAGGAGGACTCGGAACCTGCCAGCGAGCTGTTaGTCCTCACAAAGGAGACAT | + |
Preference number: 4 (lower is better) Translates to: DKCQQGLGQEHGHRRTRNLPASC*SSQRRH Trigger: ATGTCTCCTTTGTGAGGATCAACAGCTCGCTGGCAG...GTTCCGAGTCCTCCTGTGGCCATGTTCCTGCCCCAAGCCCTGTTGGCATTTGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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CDS-3UTR CCA 90 bp | TTGGGGCAGGAACATGGCCACAGGAGGACTCGGAACTCTGGCCAGGGCAGGGTGTGCGATTCTTCCAGTTaGCTCTTAATGTGTGCTCCT | + |
Preference number: 4 (lower is better) Translates to: LGQEHGHRRTRNSGQGRVCDSSS*LLMCAP Trigger: AGGAGCACACATTAAGAGCCAACTGGAAGAATCGCA...CACCCTGCCCTGGCCAGAGTTCCGAGTCCTCCTGTGGCCATGTTCCTGCCCCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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CDS-3UTR GCA 90 bp | CCATGTGCTGCAGAGCCTCTCTCCAACTCTAACATTTGTAAAACTGCCCTTTCCCTGCTGTGGGGAAGGTaGCCCTCCTGTCGGCACAGC | + |
Preference number: 4 (lower is better) Translates to: PCAAEPLSNSNICKTALSLLWGR*PSCRHS Trigger: GCTGTGCCGACAGGAGGGGCACCTTCCCCACAGCAG...GGAAAGGGCAGTTTTACAAATGTTAGAGTTGGAGAGAGGCTCTGCAGCACATGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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CDS-3UTR CCA 90 bp | CAGAAGTGGCCGCTTAAGGCAAAAGGCAAGCTGCAGATGTGTGACCACCCCTGGACTCCAAAGGCAACCTaGCTGGCTGAGACATCCAGA | + |
Preference number: 4 (lower is better) Translates to: QKWPLKAKGKLQMCDHPWTPKAT*LAETSR Trigger: TCTGGATGTCTCAGCCAGCCAGGTTGCCTTTGGAGT...CCAGGGGTGGTCACACATCTGCAGCTTGCCTTTTGCCTTAAGCGGCCACTTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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CDS-3UTR TCA 90 bp | GAAGCCCAGAAAGGAGCTGACCGCACAGCCAATTTCTCTGACAGAAATGTCTCCATGAAGGGTTCTGGCTaGGTCGTCGGCCTTCAGCAG | + |
Preference number: 4 (lower is better) Translates to: EAQKGADRTANFSDRNVSMKGSG*VVGLQQ Trigger: CTGCTGAAGGCCGACGACTCAGCCAGAACCCTTCAT...GGAGACATTTCTGTCAGAGAAATTGGCTGTGCGGTCAGCTCCTTTCTGGGCTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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3UTR CAA 72 bp | CTTTGTCTTCATGAGTTGGACAAATGCCAACAGGGCTaGGGGCAGGAACATGGCCACAGGAGGACTCGGAAC | + |
Preference number: 4 (lower is better) Translates to: LCLHELDKCQQG*GQEHGHRRTRN Trigger: GTTCCGAGTCCTCCTGTGGCCATGTTCCTGCCCCAAGCCCTGTTGGCATTTGTCCAACTCATGAAGACAAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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3UTR CAA 72 bp | AAGTACAGGCTCTTCATCAACCACACTGAAGCTGACTaGGTGGCACCCAAGGCTACTGCTGAGGAGCTGGGA | + |
Preference number: 4 (lower is better) Translates to: KYRLFINHTEAD*VAPKATAEELG Trigger: TCCCAGCTCCTCAGCAGTAGCCTTGGGTGCCACCAAGTCAGCTTCAGTGTGGTTGATGAAGAGCCTGTACTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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CDS-3UTR TCA 90 bp | AGTGTGTGTGTGTGGCATCACAATGCTCTACTTATAAAGTTGTCCCCTCCCCCAGGCAACCTGGCTGGCTaGGACATCCAGACATGTGGC | + |
Preference number: 4 (lower is better) Translates to: SVCVWHHNALLIKLSPPPGNLAG*DIQTCG Trigger: GCCACATGTCTGGATGTCTCAGCCAGCCAGGTTGCC...TGGGGGAGGGGACAACTTTATAAGTAGAGCATTGTGATGCCACACACACACACT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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CDS-3UTR GCA 90 bp | AGGGGGCAGGGATTGGGGGCTAGAAGGGCATGTATGCTTGAAACTACTCTAGTCTTGGCGAGGCACTCTTaGAAGATGAGCTTCCAGCAG | + |
Preference number: 4 (lower is better) Translates to: RGQGLGARRACMLETTLVLARHS*KMSFQQ Trigger: CTGCTGGAAGCTCATCTTGCAAGAGTGCCTCGCCAA...GACTAGAGTAGTTTCAAGCATACATGCCCTTCTAGCCCCCAATCCCTGCCCCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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CDS-3UTR GCA 90 bp | GTTCCACTGTGCTGGAAGAGGCCCAAGTTGGTGGAAGGAGAGGCAGAAGTGCAAGGTAAAGTCTCCAAGTaGATTGCCCAGCTTCGAGAG | + |
Preference number: 4 (lower is better) Translates to: VPLCWKRPKLVEGEAEVQGKVSK*IAQLRE Trigger: CTCTCGAAGCTGGGCAATGCACTTGGAGACTTTACC...TTGCACTTCTGCCTCTCCTTCCACCAACTTGGGCCTCTTCCAGCACAGTGGAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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CDS-3UTR GCA 90 bp | CAGAAGTGGCCGCTTAAGGCAAAAGGCAAGCTGCAGATGTGTGACCACCCCTGGACAGCTTCTGGTTCATaGGGTAATCCCACACAGACA | + |
Preference number: 4 (lower is better) Translates to: QKWPLKAKGKLQMCDHPWTASGS*GNPTQT Trigger: TGTCTGTGTGGGATTACCGCATGAACCAGAAGCTGT...CCAGGGGTGGTCACACATCTGCAGCTTGCCTTTTGCCTTAAGCGGCCACTTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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CDS-3UTR CCA 90 bp | AGGGGGCAGGGATTGGGGGCTAGAAGGGCATGTATGCTTGAAACTACTCTAGTCAAGCCGTGGCAACAATaGGCTTTTCTTGGCTCAGCG | + |
Preference number: 4 (lower is better) Translates to: RGQGLGARRACMLETTLVKPWQQ*AFLGSA Trigger: CGCTGAGCCAAGAAAAGCCCATTGTTGCCACGGCTT...GACTAGAGTAGTTTCAAGCATACATGCCCTTCTAGCCCCCAATCCCTGCCCCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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CDS-3UTR CCA 90 bp | CTGGGGCCTCAGTGGCTGGGTGGAGGTTGGGTGTGCTCTCTATTCTGTAGCAGACAAAAGCAGAAGCCGTaGCAACAATGGGCTTTTCTT | + |
Preference number: 4 (lower is better) Translates to: LGPQWLGGGWVCSLFCSRQKQKP*QQWAFL Trigger: AAGAAAAGCCCATTGTTGCCACGGCTTCTGCTTTTG...TCTGCTACAGAATAGAGAGCACACCCAACCTCCACCCAGCCACTGAGGCCCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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CDS-3UTR CCA 90 bp | AGTGTGTGTGTGTGGCATCACAATGCTCTACTTATAAAGTTGTCCCCTCCCCCATCGCTGCGGAGGTCATaGATCCTCACTCTCCTGTCC | + |
Preference number: 4 (lower is better) Translates to: SVCVWHHNALLIKLSPPPSLRRS*ILTLLS Trigger: GGACAGGAGAGTGAGGATCCATGACCTCCGCAGCGA...TGGGGGAGGGGACAACTTTATAAGTAGAGCATTGTGATGCCACACACACACACT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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CDS-3UTR TCA 90 bp | CCATGTGCTGCAGAGCCTCTCTCCAACTCTAACATTTGTAAAACTGCCCTTTCCCCACGATGTCTCCTGTaGCAGGCAAAGTTGTCGAGG | + |
Preference number: 4 (lower is better) Translates to: PCAAEPLSNSNICKTALSPRCLL*QAKLSR Trigger: CCTCGACAACTTTGCCTGTCACAGGAGACATCGTGG...GGAAAGGGCAGTTTTACAAATGTTAGAGTTGGAGAGAGGCTCTGCAGCACATGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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CDS-3UTR GCA 90 bp | CAGACTACACAGGGCAGAGGAAGACTTCAAACGAGTCCTTACAGGAGCAGCACAATGGGGGAAAGACAGTaGGAGGTCATAGCTGTATCC | + |
Preference number: 4 (lower is better) Translates to: QTTQGRGRLQTSPYRSSTMGERQ*EVIAVS Trigger: GGATACAGCTATGACCTCGCACTGTCTTTCCCCCAT...TGTGCTGCTCCTGTAAGGACTCGTTTGAAGTCTTCCTCTGCCCTGTGTAGTCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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3UTR CAA 72 bp | GTGTGTGTGTGGCATCACAATGCTCTACTTATAAAGTaGTCCCCTCCCCCAGTTTGGTGGTGGTTGGAGGCT | + |
Preference number: 4 (lower is better) Translates to: VCVWHHNALLIK*SPPPVWWWLEA Trigger: AGCCTCCAACCACCACCAAACTGGGGGAGGGGACAACTTTATAAGTAGAGCATTGTGATGCCACACACACAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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CDS-3UTR TCA 90 bp | GTTCCACTGTGCTGGAAGAGGCCCAAGTTGGTGGAAGGAGAGGCAGAAGTGCAAGATACTGGAATATATTaGTGGCCAGTTCGTAAGGCA | + |
Preference number: 4 (lower is better) Translates to: VPLCWKRPKLVEGEAEVQDTGIY*WPVRKA Trigger: TGCCTTACGAACTGGCCATCAATATATTCCAGTATC...TTGCACTTCTGCCTCTCCTTCCACCAACTTGGGCCTCTTCCAGCACAGTGGAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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CDS-3UTR GCA 90 bp | AAACCAGACTACACAGGGCAGAGGAAGACTTCAAACGAGTCCTTACAGGAGCAGTTGGCTCTTAATGTGTaGTCCTTGGCGAGGCACTCT | + |
Preference number: 4 (lower is better) Translates to: KPDYTGQRKTSNESLQEQLALNV*SLARHS Trigger: AGAGTGCCTCGCCAAGGAGCACACATTAAGAGCCAA...CTGCTCCTGTAAGGACTCGTTTGAAGTCTTCCTCTGCCCTGTGTAGTCTGGTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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CDS-3UTR TCA 90 bp | AGTGTGTGTGTGTGGCATCACAATGCTCTACTTATAAAGTTGTCCCCTCCCCCAACGTGTATCCAGCAATaGCCACACCATCGTGAGAAC | + |
Preference number: 4 (lower is better) Translates to: SVCVWHHNALLIKLSPPPTCIQQ*PHHREN Trigger: GTTCTCACGATGGTGTGGTCATTGCTGGATACACGT...TGGGGGAGGGGACAACTTTATAAGTAGAGCATTGTGATGCCACACACACACACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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CDS-3UTR CCA 90 bp | ATGTACAGGACAGAACAGCTCCTACAGGTAAGGTGGCCCTATAATTATCAACGGAGACATCCAGACATGTaGCAGGCTGGCCATAGACAT | + |
Preference number: 4 (lower is better) Translates to: MYRTEQLLQVRWPYNYQRRHPDM*QAGHRH Trigger: ATGTCTATGGCCAGCCTGCCACATGTCTGGATGTCT...CCGTTGATAATTATAGGGCCACCTTACCTGTAGGAGCTGTTCTGTCCTGTACAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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CDS-3UTR CCA 90 bp | GAAGCCCAGAAAGGAGCTGACCGCACAGCCAATTTCTCTGACAGAAATGTCTCCCTTCTGTTCAGATACTaGAATATATTGATGGCCAGT | + |
Preference number: 4 (lower is better) Translates to: EAQKGADRTANFSDRNVSLLFRY*NILMAS Trigger: ACTGGCCATCAATATATTCCAGTATCTGAACAGAAG...GGAGACATTTCTGTCAGAGAAATTGGCTGTGCGGTCAGCTCCTTTCTGGGCTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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CDS-3UTR CAA 90 bp | GGGGCGCCAGCCCAGCAAGAGGGAGGTGAGCTCCCCTGGGCACTTGTGCATGGGAAGTCTCCAAGTGCATaGCCCAGCTTCGAGAGGCAG | + |
Preference number: 5 (lower is better) Translates to: GAPAQQEGGELPWALVHGKSPSA*PSFERQ Trigger: CTGCCTCTCGAAGCTGGGCAATGCACTTGGAGACTT...CCCATGCACAAGTGCCCAGGGGAGCTCACCTCCCTCTTGCTGGGCTGGCGCCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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CDS-3UTR CAA 90 bp | AGCTGCCACAGCACAAGCTCGGCTCGGCCAGGCACAGGCTGGTGCTCCTCTTCTCCGCTGACCATGAGGTaGGGAGGGCTATCCCGGATG | + |
Preference number: 5 (lower is better) Translates to: SCHSTSSARPGTGWCSSSPLTMR*GGLSRM Trigger: CATCCGGGATAGCCCTCCCAACCTCATGGTCAGCGG...AGAAGAGGAGCACCAGCCTGTGCCTGGCCGAGCCGAGCTTGTGCTGTGGCAGCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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CDS-3UTR CAA 90 bp | GGGGCGCCAGCCCAGCAAGAGGGAGGTGAGCTCCCCTGGGCACTTGTGCATGGGACTCTCCTGTCCATGTaGCCGCTGACCATGAGGTTG | + |
Preference number: 5 (lower is better) Translates to: GAPAQQEGGELPWALVHGTLLSM*PLTMRL Trigger: CAACCTCATGGTCAGCGGCAACATGGACAGGAGAGT...CCCATGCACAAGTGCCCAGGGGAGCTCACCTCCCTCTTGCTGGGCTGGCGCCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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CDS TCA 90 bp | TCAAAGAAGGGCACGTCATCCAGCTCATTCAAGTCGCGGATGAGCTaGTCCACCAGCGGCTCGGGCTCCGTGGCGTCGCGGTCTGGGGGT | + |
Preference number: 5 (lower is better) Translates to: SKKGTSSSSFKSRMS*STSGSGSVASRSGG Trigger: ACCCCCAGACCGCGACGCCACGGAGCCCGAGCCGCTGGTGGATCAGCTCATCCGCGACTTGAATGAGCTGGATGACGTGCCCTTCTTTGA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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CDS TCA 90 bp | CTGACAACCTTCCAGTCATCCATCTGGACTGCGGACACCCCCAGCTaGTGGGCAGACAGCGACAGGGCGATCTTATCGCTGCGGAGGTCA | + |
Preference number: 5 (lower is better) Translates to: LTTFQSSIWTADTPS*WADSDRAILSLRRS Trigger: TGACCTCCGCAGCGATAAGATCGCCCTGTCGCTGTCTGCCCATCAGCTGGGGGTGTCCGCAGTCCAGATGGATGACTGGAAGGTTGTCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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CDS TCA 90 bp | TCATGCGGTAATCCCACACAGACACCAGCCCCTCCTCGCCTCCACTaGCAACCTTCCAGTCATCCATCTGGACTGCGGACACCCCCAGCT | + |
Preference number: 5 (lower is better) Translates to: SCGNPTQTPAPPRLH*QPSSHPSGLRTPPA Trigger: AGCTGGGGGTGTCCGCAGTCCAGATGGATGACTGGAAGGTTGTCAGTGGAGGCGAGGAGGGGCTGGTGTCTGTGTGGGATTACCGCATGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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CDS TCA 90 bp | CAGACATGTGGCAGGCTGGCCATAGACATAATGAAGGGTTCTGGCTaGGTCGTCGGCCTTCAGCAGGTACACCAGATCCCCGGCTGTGGC | + |
Preference number: 5 (lower is better) Translates to: QTCGRLAIDIMKGSG*VVGLQQVHQIPGCG Trigger: GCCACAGCCGGGGATCTGGTGTACCTGCTGAAGGCCGACGACTCAGCCAGAACCCTTCATTATGTCTATGGCCAGCCTGCCACATGTCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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CDS TCA 90 bp | ACCCGCACATCCCCTGACGTGTATCCAGCAATGACCACACCATCGTaGGAACGCACGTCACACAAAACAGCGTCGGGAACATGCTCCAGC | + |
Preference number: 5 (lower is better) Translates to: TRTSPDVYPAMTTPS*ERTSHKTASGTCSS Trigger: GCTGGAGCATGTTCCCGACGCTGTTTTGTGTGACGTGCGTTCTCACGATGGTGTGGTCATTGCTGGATACACGTCAGGGGATGTGCGGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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CDS GCA 90 bp | GTTGGGAGGGCTATCCCGGATGTTGACACAGGTAAAGTCTCCAAGTaGATTGCCCAGCTTCGAGAGGCAGCGCTCTGCTTCCAGGCTGTA | + |
Preference number: 5 (lower is better) Translates to: VGRAIPDVDTGKVSK*IAQLREAALCFQAV Trigger: TACAGCCTGGAAGCAGAGCGCTGCCTCTCGAAGCTGGGCAATGCACTTGGAGACTTTACCTGTGTCAACATCCGGGATAGCCCTCCCAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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CDS GCA 90 bp | ACAAAACAGCGTCGGGAACATGCTCCAGCTCGCTCACGGCACCTTTaGGATTCTTCCAGTTGGCTCTTAATGTGTGCTCCTTGGCGAGGC | + |
Preference number: 5 (lower is better) Translates to: TKQRREHAPARSRHL*DSSSWLLMCAPWRG Trigger: GCCTCGCCAAGGAGCACACATTAAGAGCCAACTGGAAGAATCGCAAAGGTGCCGTGAGCGAGCTGGAGCATGTTCCCGACGCTGTTTTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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CDS GCA 90 bp | GTCGTCGGCCTTCAGCAGGTACACCAGATCCCCGGCTGTGGCTATTaGCACAGGGTACCTCCCAGTATTCGGAACTATTTCAAGGTAGTC | + |
Preference number: 5 (lower is better) Translates to: VVGLQQVHQIPGCGY*HRVPPSIRNYFKVV Trigger: GACTACCTTGAAATAGTTCCGAATACTGGGAGGTACCCTGTGGCAATAGCCACAGCCGGGGATCTGGTGTACCTGCTGAAGGCCGACGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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CDS CCA 90 bp | TGGCTGAGTCGTCGGCCTTCAGCAGGTACACCAGATCCCCGGCTGTaGCTATTGCCACAGGGTACCTCCCAGTATTCGGAACTATTTCAA | + |
Preference number: 5 (lower is better) Translates to: WLSRRPSAGTPDPRL*LLPQGTSQYSELFQ Trigger: TTGAAATAGTTCCGAATACTGGGAGGTACCCTGTGGCAATAGCCACAGCCGGGGATCTGGTGTACCTGCTGAAGGCCGACGACTCAGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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CDS-3UTR CAA 90 bp | CCCCCAGCCGGGGGAAATAAACCAGACTACACAGGGCAGAGGAAGACTTCAAACCTTGGCGAGGCACTCTaGCAAGATGAGCTTCCAGCA | + |
Preference number: 5 (lower is better) Translates to: PPAGGNKPDYTGQRKTSNLGEAL*QDELPA Trigger: TGCTGGAAGCTCATCTTGCAAGAGTGCCTCGCCAAG...GTTTGAAGTCTTCCTCTGCCCTGTGTAGTCTGGTTTATTTCCCCCGGCTGGGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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CDS-3UTR CAA 90 bp | AAGTTCCACTGTGCTGGAAGAGGCCCAAGTTGGTGGAAGGAGAGGCAGAAGTGCTCGCTCACGGCACCTTaGCGATTCTTCCAGTTGGCT | + |
Preference number: 5 (lower is better) Translates to: KFHCAGRGPSWWKERQKCSLTAP*RFFQLA Trigger: AGCCAACTGGAAGAATCGCAAAGGTGCCGTGAGCGA...GCACTTCTGCCTCTCCTTCCACCAACTTGGGCCTCTTCCAGCACAGTGGAACTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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CDS-3UTR CAA 90 bp | ACAGCACAAGCTCGGCTCGGCCAGGCACAGGCTGGTGCTCCTCTTCTGTTCCAGCAAGGGCTTGTATTCTaGCGTCATGCTCAAAACGAA | + |
Preference number: 5 (lower is better) Translates to: TAQARLGQAQAGAPLLFQQGLVF*RHAQNE Trigger: TTCGTTTTGAGCATGACGCAAGAATACAAGCCCTTG...CTGGAACAGAAGAGGAGCACCAGCCTGTGCCTGGCCGAGCCGAGCTTGTGCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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CDS-3UTR CAA 90 bp | AAGTTCCACTGTGCTGGAAGAGGCCCAAGTTGGTGGAAGGAGAGGCAGAAGTGCAACAATGGGCTTTTCTaGGCTCAGCGCAAGGGCTTG | + |
Preference number: 5 (lower is better) Translates to: KFHCAGRGPSWWKERQKCNNGLF*AQRKGL Trigger: CAAGCCCTTGCGCTGAGCCAAGAAAAGCCCATTGTT...GCACTTCTGCCTCTCCTTCCACCAACTTGGGCCTCTTCCAGCACAGTGGAACTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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CDS GCA 90 bp | GCCGGTACCACAGCACCTCGTCTTCAGCAATCACCTTCCATGTCTTaGTCACCTGAGCACACAGTCCCAGCTCTCTTCTGTTCAGATACT | + |
Preference number: 5 (lower is better) Translates to: AGTTAPRLQQSPSMS*SPEHTVPALFCSDT Trigger: AGTATCTGAACAGAAGAGAGCTGGGACTGTGTGCTCAGGTGAGCAAGACATGGAAGGTGATTGCTGAAGACGAGGTGCTGTGGTACCGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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CDS GCA 90 bp | TCTCAGGTCCCAAATGTTAAGGATCCCATCCTCGTAAGCCGCCACTaGCAGCGAGCTGTTGATCCTCACAAAGGAGACATATGGCTGCAT | + |
Preference number: 5 (lower is better) Translates to: SQVPNVKDPILVSRH*QRAVDPHKGDIWLH Trigger: ATGCAGCCATATGTCTCCTTTGTGAGGATCAACAGCTCGCTGGCAGTGGCGGCTTACGAGGATGGGATCCTTAACATTTGGGACCTGAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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CDS CCA 90 bp | TCTGAACTTCAAACTCCGAGGCCACATGCCAATGCCCCTCCTCGTTaGGGTACAACATCACAACGTCAAAAGCAGAAGCCGTGGCAACAA | + |
Preference number: 5 (lower is better) Translates to: SELQTPRPHANAPPR*GTTSQRQKQKPWQQ Trigger: TTGTTGCCACGGCTTCTGCTTTTGACGTTGTGATGTTGTACCCCAACGAGGAGGGGCATTGGCATGTGGCCTCGGAGTTTGAAGTTCAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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CDS-3UTR CAA 90 bp | CCCCCAGCCGGGGGAAATAAACCAGACTACACAGGGCAGAGGAAGACTTCAAACCTGTACACCAGGATCTaGTTTCCTTCATACACCCAT | + |
Preference number: 5 (lower is better) Translates to: PPAGGNKPDYTGQRKTSNLYTRI*FPSYTH Trigger: ATGGGTGTATGAAGGAAACAAGATCCTGGTGTACAG...GTTTGAAGTCTTCCTCTGCCCTGTGTAGTCTGGTTTATTTCCCCCGGCTGGGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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CDS GCA 90 bp | ATGGGCTTTTCTTGGCTCAGCGCAAGGGCTTGTATTCTTGCGTCATaGTCAAAACGAAAGATAGGGAACCTTCCGGTTCTCAGGTCCCAA | + |
Preference number: 5 (lower is better) Translates to: MGFSWLSARACILAS*SKRKIGNLPVLRSQ Trigger: TTGGGACCTGAGAACCGGAAGGTTCCCTATCTTTCGTTTTGAGCATGACGCAAGAATACAAGCCCTTGCGCTGAGCCAAGAAAAGCCCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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CDS GCA 90 bp | GGCAACAATGGGCTTTTCTTGGCTCAGCGCAAGGGCTTGTATTCTTaGGTCATGCTCAAAACGAAAGATAGGGAACCTTCCGGTTCTCAG | + |
Preference number: 5 (lower is better) Translates to: GNNGLFLAQRKGLYS*VMLKTKDREPSGSQ Trigger: CTGAGAACCGGAAGGTTCCCTATCTTTCGTTTTGAGCATGACGCAAGAATACAAGCCCTTGCGCTGAGCCAAGAAAAGCCCATTGTTGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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CDS TCA 90 bp | GAGCACACAGTCCCAGCTCTCTTCTGTTCAGATACTGGAATATATTaGTGGCCAGTTCGTAAGGCAGACGGACATCAAAGAAGGGCACGT | + |
Preference number: 5 (lower is better) Translates to: EHTVPALFCSDTGIY*WPVRKADGHQRRAR Trigger: ACGTGCCCTTCTTTGATGTCCGTCTGCCTTACGAACTGGCCATCAATATATTCCAGTATCTGAACAGAAGAGAGCTGGGACTGTGTGCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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CDS CCA 72 bp | TGGACGTATCCTTCCTGTCGCCTCCCCGGCCAGGCCTaGGCGCCGGGGGTCGGCCCGCGCCCTCCAGCAGCC | + |
Preference number: 6 (lower is better) Translates to: WTYPSCRLPGQA*APGVGPRPPAA Trigger: GGCTGCTGGAGGGCGCGGGCCGACCCCCGGCGCCCAGGCCTGGCCGGGGAGGCGACAGGAAGGATACGTCCA 78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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CDS GCA 72 bp | CGTCGCCTCAGCGCCTGTGACTGCGCCAACTCCTCCTaGCAGTGCCGGCGGAACTCCTCCAGGTTGTGGTCG | + |
Preference number: 6 (lower is better) Translates to: RRLSACDCANSS*QCRRNSSRLWS Trigger: CGACCACAACCTGGAGGAGTTCCGCCGGCACTGGCAGGAGGAGTTGGCGCAGTCACAGGCGCTGAGGCGACG 68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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CDS TCA 72 bp | GGCACGTCATCCAGCTCATTCAAGTCGCGGATGAGCTaGTCCACCAGCGGCTCGGGCTCCGTGGCGTCGCGG | + |
Preference number: 6 (lower is better) Translates to: GTSSSSFKSRMS*STSGSGSVASR Trigger: CCGCGACGCCACGGAGCCCGAGCCGCTGGTGGATCAGCTCATCCGCGACTTGAATGAGCTGGATGACGTGCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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CDS GCA 72 bp | GCCTCCACTGACAACCTTCCAGTCATCCATCTGGACTaGGGACACCCCCAGCTGATGGGCAGACAGCGACAG | + |
Preference number: 6 (lower is better) Translates to: ASTDNLPVIHLD*GHPQLMGRQRQ Trigger: CTGTCGCTGTCTGCCCATCAGCTGGGGGTGTCCGCAGTCCAGATGGATGACTGGAAGGTTGTCAGTGGAGGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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CDS CCA 72 bp | CGTCGGCCTTCAGCAGGTACACCAGATCCCCGGCTGTaGCTATTGCCACAGGGTACCTCCCAGTATTCGGAA | + |
Preference number: 6 (lower is better) Translates to: RRPSAGTPDPRL*LLPQGTSQYSE Trigger: TTCCGAATACTGGGAGGTACCCTGTGGCAATAGCCACAGCCGGGGATCTGGTGTACCTGCTGAAGGCCGACG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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CDS CAA 90 bp | GGAGGGCTATCCCGGATGTTGACACAGGTAAAGTCTCCAAGTGCATaGCCCAGCTTCGAGAGGCAGCGCTCTGCTTCCAGGCTGTACACC | + |
Preference number: 6 (lower is better) Translates to: GGLSRMLTQVKSPSA*PSFERQRSASRLYT Trigger: GGTGTACAGCCTGGAAGCAGAGCGCTGCCTCTCGAAGCTGGGCAATGCACTTGGAGACTTTACCTGTGTCAACATCCGGGATAGCCCTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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CDS TCA 72 bp | GGCAGGCTGGCCATAGACATAATGAAGGGTTCTGGCTaGGTCGTCGGCCTTCAGCAGGTACACCAGATCCCC | + |
Preference number: 6 (lower is better) Translates to: GRLAIDIMKGSG*VVGLQQVHQIP Trigger: GGGGATCTGGTGTACCTGCTGAAGGCCGACGACTCAGCCAGAACCCTTCATTATGTCTATGGCCAGCCTGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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CDS TCA 72 bp | GGAAAGACAGTGCGAGGTCATAGCTGTATCCAGCCATaGTGTCACGGGGTAAGCGGCAGACAGGAAGGGGGC | + |
Preference number: 6 (lower is better) Translates to: GKTVRGHSCIQP*CHGVSGRQEGG Trigger: GCCCCCTTCCTGTCTGCCGCTTACCCCGTGACATCATGGCTGGATACAGCTATGACCTCGCACTGTCTTTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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CDS CCA 72 bp | CCCATCCTAGACTCTTCACTCCAAAGGCAACCTGGCTaGCTGAGACATCCAGACATGTGGCAGGCTGGCCAT | + |
Preference number: 6 (lower is better) Translates to: PILDSSLQRQPG*LRHPDMWQAGH Trigger: ATGGCCAGCCTGCCACATGTCTGGATGTCTCAGCCAGCCAGGTTGCCTTTGGAGTGAAGAGTCTAGGATGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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CDS CAA 72 bp | GCGTCGGGAACATGCTCCAGCTCGCTCACGGCACCTTaGCGATTCTTCCAGTTGGCTCTTAATGTGTGCTCC | + |
Preference number: 6 (lower is better) Translates to: ASGTCSSSLTAP*RFFQLALNVCS Trigger: GGAGCACACATTAAGAGCCAACTGGAAGAATCGCAAAGGTGCCGTGAGCGAGCTGGAGCATGTTCCCGACGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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CDS CAA 72 bp | CCGCTGACCATGAGGTTGGGAGGGCTATCCCGGATGTaGACACAGGTAAAGTCTCCAAGTGCATTGCCCAGC | + |
Preference number: 6 (lower is better) Translates to: PLTMRLGGLSRM*TQVKSPSALPS Trigger: GCTGGGCAATGCACTTGGAGACTTTACCTGTGTCAACATCCGGGATAGCCCTCCCAACCTCATGGTCAGCGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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CDS CAA 90 bp | CACAAAACAGCGTCGGGAACATGCTCCAGCTCGCTCACGGCACCTTaGCGATTCTTCCAGTTGGCTCTTAATGTGTGCTCCTTGGCGAGG | + |
Preference number: 6 (lower is better) Translates to: HKTASGTCSSSLTAP*RFFQLALNVCSLAR Trigger: CCTCGCCAAGGAGCACACATTAAGAGCCAACTGGAAGAATCGCAAAGGTGCCGTGAGCGAGCTGGAGCATGTTCCCGACGCTGTTTTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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CDS TCA 72 bp | TCCCATCCTCGTAAGCCGCCACTGCCAGCGAGCTGTTaGTCCTCACAAAGGAGACATATGGCTGCATTCCAG | + |
Preference number: 6 (lower is better) Translates to: SHPRKPPLPASC*SSQRRHMAAFQ Trigger: CTGGAATGCAGCCATATGTCTCCTTTGTGAGGATCAACAGCTCGCTGGCAGTGGCGGCTTACGAGGATGGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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CDS GCA 72 bp | CGTCGGGAACATGCTCCAGCTCGCTCACGGCACCTTTaGGATTCTTCCAGTTGGCTCTTAATGTGTGCTCCT | + |
Preference number: 6 (lower is better) Translates to: RREHAPARSRHL*DSSSWLLMCAP Trigger: AGGAGCACACATTAAGAGCCAACTGGAAGAATCGCAAAGGTGCCGTGAGCGAGCTGGAGCATGTTCCCGACG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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CDS GCA 72 bp | TCCAAGTGCATTGCCCAGCTTCGAGAGGCAGCGCTCTaGTTCCAGGCTGTACACCAGGATCTTGTTTCCTTC | + |
Preference number: 6 (lower is better) Translates to: SKCIAQLREAAL*FQAVHQDLVSF Trigger: GAAGGAAACAAGATCCTGGTGTACAGCCTGGAAGCAGAGCGCTGCCTCTCGAAGCTGGGCAATGCACTTGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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CDS GCA 72 bp | GCTATCCCGGATGTTGACACAGGTAAAGTCTCCAAGTaGATTGCCCAGCTTCGAGAGGCAGCGCTCTGCTTC | + |
Preference number: 6 (lower is better) Translates to: AIPDVDTGKVSK*IAQLREAALCF Trigger: GAAGCAGAGCGCTGCCTCTCGAAGCTGGGCAATGCACTTGGAGACTTTACCTGTGTCAACATCCGGGATAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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CDS CCA 72 bp | CCAGCTCGCTCACGGCACCTTTGCGATTCTTCCAGTTaGCTCTTAATGTGTGCTCCTTGGCGAGGCACTCTT | + |
Preference number: 6 (lower is better) Translates to: PARSRHLCDSSS*LLMCAPWRGTL Trigger: AAGAGTGCCTCGCCAAGGAGCACACATTAAGAGCCAACTGGAAGAATCGCAAAGGTGCCGTGAGCGAGCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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CDS CCA 72 bp | CAAACTCCGAGGCCACATGCCAATGCCCCTCCTCGTTaGGGTACAACATCACAACGTCAAAAGCAGAAGCCG | + |
Preference number: 6 (lower is better) Translates to: QTPRPHANAPPR*GTTSQRQKQKP Trigger: CGGCTTCTGCTTTTGACGTTGTGATGTTGTACCCCAACGAGGAGGGGCATTGGCATGTGGCCTCGGAGTTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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CDS CAA 72 bp | TCCAGCTCGCTCACGGCACCTTTGCGATTCTTCCAGTaGGCTCTTAATGTGTGCTCCTTGGCGAGGCACTCT | + |
Preference number: 6 (lower is better) Translates to: SSSLTAPLRFFQ*ALNVCSLARHS Trigger: AGAGTGCCTCGCCAAGGAGCACACATTAAGAGCCAACTGGAAGAATCGCAAAGGTGCCGTGAGCGAGCTGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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CDS CAA 72 bp | CTCACTCTCCTGTCCATGTTGCCGCTGACCATGAGGTaGGGAGGGCTATCCCGGATGTTGACACAGGTAAAG | + |
Preference number: 6 (lower is better) Translates to: LTLLSMLPLTMR*GGLSRMLTQVK Trigger: CTTTACCTGTGTCAACATCCGGGATAGCCCTCCCAACCTCATGGTCAGCGGCAACATGGACAGGAGAGTGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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CDS CAA 90 bp | GGAACATGCTCCAGCTCGCTCACGGCACCTTTGCGATTCTTCCAGTaGGCTCTTAATGTGTGCTCCTTGGCGAGGCACTCTTGCAAGATG | + |
Preference number: 6 (lower is better) Translates to: GTCSSSLTAPLRFFQ*ALNVCSLARHSCKM Trigger: CATCTTGCAAGAGTGCCTCGCCAAGGAGCACACATTAAGAGCCAACTGGAAGAATCGCAAAGGTGCCGTGAGCGAGCTGGAGCATGTTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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CDS CAA 90 bp | AGTCGTCGGCCTTCAGCAGGTACACCAGATCCCCGGCTGTGGCTATaGCCACAGGGTACCTCCCAGTATTCGGAACTATTTCAAGGTAGT | + |
Preference number: 6 (lower is better) Translates to: SRRPSAGTPDPRLWL*PQGTSQYSELFQGS Trigger: ACTACCTTGAAATAGTTCCGAATACTGGGAGGTACCCTGTGGCAATAGCCACAGCCGGGGATCTGGTGTACCTGCTGAAGGCCGACGACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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CDS TCA 72 bp | TCCCCTGACGTGTATCCAGCAATGACCACACCATCGTaGGAACGCACGTCACACAAAACAGCGTCGGGAACA | + |
Preference number: 6 (lower is better) Translates to: SPDVYPAMTTPS*ERTSHKTASGT Trigger: TGTTCCCGACGCTGTTTTGTGTGACGTGCGTTCTCACGATGGTGTGGTCATTGCTGGATACACGTCAGGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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CDS GCA 72 bp | CTTCAGCAGGTACACCAGATCCCCGGCTGTGGCTATTaGCACAGGGTACCTCCCAGTATTCGGAACTATTTC | + |
Preference number: 6 (lower is better) Translates to: LQQVHQIPGCGY*HRVPPSIRNYF Trigger: GAAATAGTTCCGAATACTGGGAGGTACCCTGTGGCAATAGCCACAGCCGGGGATCTGGTGTACCTGCTGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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CDS CCA 72 bp | CAAAGGCAACCTGGCTGGCTGAGACATCCAGACATGTaGCAGGCTGGCCATAGACATAATGAAGGGTTCTGG | + |
Preference number: 6 (lower is better) Translates to: QRQPGWLRHPDM*QAGHRHNEGFW Trigger: CCAGAACCCTTCATTATGTCTATGGCCAGCCTGCCACATGTCTGGATGTCTCAGCCAGCCAGGTTGCCTTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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CDS CAA 72 bp | CCTTCAGCAGGTACACCAGATCCCCGGCTGTGGCTATaGCCACAGGGTACCTCCCAGTATTCGGAACTATTT | + |
Preference number: 6 (lower is better) Translates to: PSAGTPDPRLWL*PQGTSQYSELF Trigger: AAATAGTTCCGAATACTGGGAGGTACCCTGTGGCAATAGCCACAGCCGGGGATCTGGTGTACCTGCTGAAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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CDS CAA 90 bp | TCATGGATCCTCACTCTCCTGTCCATGTTGCCGCTGACCATGAGGTaGGGAGGGCTATCCCGGATGTTGACACAGGTAAAGTCTCCAAGT | + |
Preference number: 6 (lower is better) Translates to: SWILTLLSMLPLTMR*GGLSRMLTQVKSPS Trigger: ACTTGGAGACTTTACCTGTGTCAACATCCGGGATAGCCCTCCCAACCTCATGGTCAGCGGCAACATGGACAGGAGAGTGAGGATCCATGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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CDS GCA 72 bp | ACAGCACCTCGTCTTCAGCAATCACCTTCCATGTCTTaGTCACCTGAGCACACAGTCCCAGCTCTCTTCTGT | + |
Preference number: 6 (lower is better) Translates to: TAPRLQQSPSMS*SPEHTVPALFC Trigger: ACAGAAGAGAGCTGGGACTGTGTGCTCAGGTGAGCAAGACATGGAAGGTGATTGCTGAAGACGAGGTGCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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CDS GCA 72 bp | AGCGAGCTGTTGATCCTCACAAAGGAGACATATGGCTaGATTCCAGGATCCTCCTCCTCAGACTCAGACTCC | + |
Preference number: 6 (lower is better) Translates to: SELLILTKETYG*IPGSSSSDSDS Trigger: GGAGTCTGAGTCTGAGGAGGAGGATCCTGGAATGCAGCCATATGTCTCCTTTGTGAGGATCAACAGCTCGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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CDS GCA 72 bp | GCACCTTTGCGATTCTTCCAGTTGGCTCTTAATGTGTaGTCCTTGGCGAGGCACTCTTGCAAGATGAGCTTC | + |
Preference number: 6 (lower is better) Translates to: APLRFFQLALNV*SLARHSCKMSF Trigger: GAAGCTCATCTTGCAAGAGTGCCTCGCCAAGGAGCACACATTAAGAGCCAACTGGAAGAATCGCAAAGGTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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CDS GCA 72 bp | CCAAATGTTAAGGATCCCATCCTCGTAAGCCGCCACTaGCAGCGAGCTGTTGATCCTCACAAAGGAGACATA | + |
Preference number: 6 (lower is better) Translates to: PNVKDPILVSRH*QRAVDPHKGDI Trigger: TATGTCTCCTTTGTGAGGATCAACAGCTCGCTGGCAGTGGCGGCTTACGAGGATGGGATCCTTAACATTTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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CDS CCA 72 bp | TCAAAAGCAGAAGCCGTGGCAACAATGGGCTTTTCTTaGCTCAGCGCAAGGGCTTGTATTCTTGCGTCATGC | + |
Preference number: 6 (lower is better) Translates to: SKAEAVATMGFS*LSARACILASC Trigger: GCATGACGCAAGAATACAAGCCCTTGCGCTGAGCCAAGAAAAGCCCATTGTTGCCACGGCTTCTGCTTTTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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CDS CAA 72 bp | GTCAAAAGCAGAAGCCGTGGCAACAATGGGCTTTTCTaGGCTCAGCGCAAGGGCTTGTATTCTTGCGTCATG | + |
Preference number: 6 (lower is better) Translates to: VKSRSRGNNGLF*AQRKGLYSCVM Trigger: CATGACGCAAGAATACAAGCCCTTGCGCTGAGCCAAGAAAAGCCCATTGTTGCCACGGCTTCTGCTTTTGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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CDS CAA 72 bp | AGGCAGCGCTCTGCTTCCAGGCTGTACACCAGGATCTaGTTTCCTTCATACACCCATCCTAGACTCTTCACT | + |
Preference number: 6 (lower is better) Translates to: RQRSASRLYTRI*FPSYTHPRLFT Trigger: AGTGAAGAGTCTAGGATGGGTGTATGAAGGAAACAAGATCCTGGTGTACAGCCTGGAAGCAGAGCGCTGCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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CDS CAA 90 bp | AGAAGCCGTGGCAACAATGGGCTTTTCTTGGCTCAGCGCAAGGGCTaGTATTCTTGCGTCATGCTCAAAACGAAAGATAGGGAACCTTCC | + |
Preference number: 6 (lower is better) Translates to: RSRGNNGLFLAQRKG*YSCVMLKTKDREPS Trigger: GGAAGGTTCCCTATCTTTCGTTTTGAGCATGACGCAAGAATACAAGCCCTTGCGCTGAGCCAAGAAAAGCCCATTGTTGCCACGGCTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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CDS GCA 72 bp | TCTTGGCTCAGCGCAAGGGCTTGTATTCTTGCGTCATaGTCAAAACGAAAGATAGGGAACCTTCCGGTTCTC | + |
Preference number: 6 (lower is better) Translates to: SWLSARACILAS*SKRKIGNLPVL Trigger: GAGAACCGGAAGGTTCCCTATCTTTCGTTTTGAGCATGACGCAAGAATACAAGCCCTTGCGCTGAGCCAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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CDS GCA 72 bp | GGGCTTTTCTTGGCTCAGCGCAAGGGCTTGTATTCTTaGGTCATGCTCAAAACGAAAGATAGGGAACCTTCC | + |
Preference number: 6 (lower is better) Translates to: GLFLAQRKGLYS*VMLKTKDREPS Trigger: GGAAGGTTCCCTATCTTTCGTTTTGAGCATGACGCAAGAATACAAGCCCTTGCGCTGAGCCAAGAAAAGCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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CDS CCA 72 bp | ACATCACAACGTCAAAAGCAGAAGCCGTGGCAACAATaGGCTTTTCTTGGCTCAGCGCAAGGGCTTGTATTC | + |
Preference number: 6 (lower is better) Translates to: TSQRQKQKPWQQ*AFLGSAQGLVF Trigger: GAATACAAGCCCTTGCGCTGAGCCAAGAAAAGCCCATTGTTGCCACGGCTTCTGCTTTTGACGTTGTGATGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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CDS CAA 72 bp | GGCAACAATGGGCTTTTCTTGGCTCAGCGCAAGGGCTaGTATTCTTGCGTCATGCTCAAAACGAAAGATAGG | + |
Preference number: 6 (lower is better) Translates to: GNNGLFLAQRKG*YSCVMLKTKDR Trigger: CCTATCTTTCGTTTTGAGCATGACGCAAGAATACAAGCCCTTGCGCTGAGCCAAGAAAAGCCCATTGTTGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |
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CDS TCA 72 bp | GTCCCAGCTCTCTTCTGTTCAGATACTGGAATATATTaGTGGCCAGTTCGTAAGGCAGACGGACATCAAAGA | + |
Preference number: 6 (lower is better) Translates to: VPALFCSDTGIY*WPVRKADGHQR Trigger: TCTTTGATGTCCGTCTGCCTTACGAACTGGCCATCAATATATTCCAGTATCTGAACAGAAGAGAGCTGGGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049474.9 |