Pregenerated sensors for FBXW5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000015095Ensembl transcript IDs: ENSMUST00000015239.10, ENSMUST00000124375.2
Found 115 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCCTGTGGCCTGCTGCCCAGGGTACACTCAAGACATCCAAGGGTGTaGGTTTGGCTGAATATGAAAGGTACCCAGGCAGAAGCCAGCTTG | + |
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Preference number: 1 (lower is better) Translates to: ACGLLPRVHSRHPRV*VWLNMKGTQAEASL Trigger: CAAGCTGGCTTCTGCCTGGGTACCTTTCATATTCAGCCAAACCCACACCCTTGGATGTCTTGAGTGTACCCTGGGCAGCAGGCCACAGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015239.10 |
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| 3UTR TCA 90 bp | CTGCCAACCCAAGGGAAGAGGGTAGGTGAAGAACAGGGTTCCCAATaGCCTGTGTACCCCAAGCTAGCCAAGAGGCTAGCATGGGATCTG | + |
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Preference number: 1 (lower is better) Translates to: LPTQGKRVGEEQGSQ*PVYPKLAKRLAWDL Trigger: CAGATCCCATGCTAGCCTCTTGGCTAGCTTGGGGTACACAGGTCATTGGGAACCCTGTTCTTCACCTACCCTCTTCCCTTGGGTTGGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015239.10 |
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| 3UTR TCA 90 bp | CATGCAGCACCCACAGTCCACTGCAGGCCACTCAGTAGCAAAAACTaGATTATCAGAGACCAGTGCCTGTGGCCTGCTGCCCAGGGTACA | + |
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Preference number: 1 (lower is better) Translates to: HAAPTVHCRPLSSKN*IIRDQCLWPAAQGT Trigger: TGTACCCTGGGCAGCAGGCCACAGGCACTGGTCTCTGATAATTCAGTTTTTGCTACTGAGTGGCCTGCAGTGGACTGTGGGTGCTGCATG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000015239.10 |
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| 3UTR-3UTR CCA 90 bp | GTTCAGGAGTGCAGCATGCAGCACCCACAGTCCACTGCAGGCCACTCAGTAGCATGTGTGTGTGTGTGTTaGGGTCAGGCTGCCCCTCCT | + |
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Preference number: 2 (lower is better) Translates to: VQECSMQHPQSTAGHSVACVCVC*GQAAPP Trigger: AGGAGGGGCAGCCTGACCCCAACACACACACACACA...TGCTACTGAGTGGCCTGCAGTGGACTGTGGGTGCTGCATGCTGCACTCCTGAAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015239.10 |
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| 3UTR-3UTR CCA 90 bp | AGCTTGGACCTGTGTGAGCTGCCAACCCAAGGGAAGAGGGTAGGTGAAGAACAGGCCAAGAGGCTAGCATaGGATCTGGTGCTGCCAACA | + |
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Preference number: 2 (lower is better) Translates to: SLDLCELPTQGKRVGEEQAKRLA*DLVLPT Trigger: TGTTGGCAGCACCAGATCCCATGCTAGCCTCTTGGC...CTGTTCTTCACCTACCCTCTTCCCTTGGGTTGGCAGCTCACACAGGTCCAAGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015239.10 |
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| 3UTR CAA 90 bp | GTGTGGGTTTGGCTGAATATGAAAGGTACCCAGGCAGAAGCCAGCTaGGACCTGTGTGAGCTGCCAACCCAAGGGAAGAGGGTAGGTGAA | + |
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Preference number: 2 (lower is better) Translates to: VWVWLNMKGTQAEAS*DLCELPTQGKRVGE Trigger: TTCACCTACCCTCTTCCCTTGGGTTGGCAGCTCACACAGGTCCAAGCTGGCTTCTGCCTGGGTACCTTTCATATTCAGCCAAACCCACAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015239.10 |
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| 3UTR-3UTR GCA 90 bp | CTCAAGACATCCAAGGGTGTGGGTTTGGCTGAATATGAAAGGTACCCAGGCAGATGGACCTGTGTGAGCTaGCAACCCAAGGGAAGAGGG | + |
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Preference number: 2 (lower is better) Translates to: LKTSKGVGLAEYERYPGRWTCVS*QPKGRG Trigger: CCCTCTTCCCTTGGGTTGGCAGCTCACACAGGTCCA...TCTGCCTGGGTACCTTTCATATTCAGCCAAACCCACACCCTTGGATGTCTTGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015239.10 |
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| 3UTR GCA 72 bp | TGCCAACTGTTTATTCAGGCCCAAACAGTTCAGGAGTaGAGCATGCAGCACCCACAGTCCACTGCAGGCCAC | + |
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Preference number: 3 (lower is better) Translates to: CQLFIQAQTVQE*SMQHPQSTAGH Trigger: GTGGCCTGCAGTGGACTGTGGGTGCTGCATGCTGCACTCCTGAACTGTTTGGGCCTGAATAAACAGTTGGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015239.10 |
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| 3UTR TCA 72 bp | CAAGGGAAGAGGGTAGGTGAAGAACAGGGTTCCCAATaGCCTGTGTACCCCAAGCTAGCCAAGAGGCTAGCA | + |
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Preference number: 3 (lower is better) Translates to: QGKRVGEEQGSQ*PVYPKLAKRLA Trigger: TGCTAGCCTCTTGGCTAGCTTGGGGTACACAGGTCATTGGGAACCCTGTTCTTCACCTACCCTCTTCCCTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015239.10 |
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| 3UTR CCA 72 bp | CTGCTGCCCAGGGTACACTCAAGACATCCAAGGGTGTaGGTTTGGCTGAATATGAAAGGTACCCAGGCAGAA | + |
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Preference number: 3 (lower is better) Translates to: LLPRVHSRHPRV*VWLNMKGTQAE Trigger: TTCTGCCTGGGTACCTTTCATATTCAGCCAAACCCACACCCTTGGATGTCTTGAGTGTACCCTGGGCAGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015239.10 |
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| 3UTR GCA 72 bp | CAAAAACTGAATTATCAGAGACCAGTGCCTGTGGCCTaGTGCCCAGGGTACACTCAAGACATCCAAGGGTGT | + |
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Preference number: 3 (lower is better) Translates to: QKLNYQRPVPVA*CPGYTQDIQGC Trigger: ACACCCTTGGATGTCTTGAGTGTACCCTGGGCAGCAGGCCACAGGCACTGGTCTCTGATAATTCAGTTTTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000015239.10 |
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| 3UTR-3UTR CAA 90 bp | ACATCCAAGGGTGTGGGTTTGGCTGAATATGAAAGGTACCCAGGCAGAAGCCAGCTAAGTGAGCAGGTTTaGTGTGTGTGTGTGTGTGTG | + |
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Preference number: 3 (lower is better) Translates to: TSKGVGLAEYERYPGRSQLSEQV*CVCVCV Trigger: CACACACACACACACACACAAAACCTGCTCACTTAG...CTGGCTTCTGCCTGGGTACCTTTCATATTCAGCCAAACCCACACCCTTGGATGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015239.10 |
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| CDS-3UTR CCA 90 bp | AGCCAAGAGGCTAGCATGGGATCTGGTGCTGCCAACAAGGGCTACCCTAGTGCTGGCTTGGTGTGGCCCTaGGCCAGCAGCTCAGCCACC | + |
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Preference number: 4 (lower is better) Translates to: SQEASMGSGAANKGYPSAGLVWP*ASSSAT Trigger: GGTGGCTGAGCTGCTGGCCCAGGGCCACACCAAGCC...AGCACTAGGGTAGCCCTTGTTGGCAGCACCAGATCCCATGCTAGCCTCTTGGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015239.10 |
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| CDS-3UTR CCA 90 bp | GTTCAGGAGTGCAGCATGCAGCACCCACAGTCCACTGCAGGCCACTCAGTAGCACTCCGCAATGGGTGGTaGCTGCATGGGGTCGGCTAC | + |
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Preference number: 4 (lower is better) Translates to: VQECSMQHPQSTAGHSVALRNGW*LHGVGY Trigger: GTAGCCGACCCCATGCAGCCACCACCCATTGCGGAG...TGCTACTGAGTGGCCTGCAGTGGACTGTGGGTGCTGCATGCTGCACTCCTGAAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015239.10 |
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| CDS-3UTR CCA 90 bp | AGCTTGGACCTGTGTGAGCTGCCAACCCAAGGGAAGAGGGTAGGTGAAGAACAGCTCCTCCGCAATGGGTaGTGGCTGCATGGGGTCGGC | + |
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Preference number: 4 (lower is better) Translates to: SLDLCELPTQGKRVGEEQLLRNG*WLHGVG Trigger: GCCGACCCCATGCAGCCACCACCCATTGCGGAGGAG...CTGTTCTTCACCTACCCTCTTCCCTTGGGTTGGCAGCTCACACAGGTCCAAGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015239.10 |
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| CDS-3UTR TCA 90 bp | AGCTTGGACCTGTGTGAGCTGCCAACCCAAGGGAAGAGGGTAGGTGAAGAACAGCCGAGTGGGAGAAGCTaGGGTGCAGGACCTGGTCAG | + |
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Preference number: 4 (lower is better) Translates to: SLDLCELPTQGKRVGEEQPSGRS*GAGPGQ Trigger: CTGACCAGGTCCTGCACCTCAGCTTCTCCCACTCGG...CTGTTCTTCACCTACCCTCTTCCCTTGGGTTGGCAGCTCACACAGGTCCAAGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015239.10 |
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| CDS-3UTR TCA 90 bp | GAAGCCAGCTTGGACCTGTGTGAGCTGCCAACCCAAGGGAAGAGGGTAGGTGAAGCCGATCTGATGCGGTaGGTACGTGAGGCAGCCAGT | + |
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Preference number: 4 (lower is better) Translates to: EASLDLCELPTQGKRVGEADLMR*VREAAS Trigger: ACTGGCTGCCTCACGTACTCACCGCATCAGATCGGC...TTCACCTACCCTCTTCCCTTGGGTTGGCAGCTCACACAGGTCCAAGCTGGCTTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015239.10 |
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| CDS-3UTR GCA 90 bp | AGCTTGGACCTGTGTGAGCTGCCAACCCAAGGGAAGAGGGTAGGTGAAGAACAGTCCCGGGACACAGCCTaGCATTGGCGGCATACCAGC | + |
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Preference number: 4 (lower is better) Translates to: SLDLCELPTQGKRVGEEQSRDTA*HWRHTS Trigger: GCTGGTATGCCGCCAATGGCAGGCTGTGTCCCGGGA...CTGTTCTTCACCTACCCTCTTCCCTTGGGTTGGCAGCTCACACAGGTCCAAGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015239.10 |
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| CDS-3UTR CCA 90 bp | GTTCAGGAGTGCAGCATGCAGCACCCACAGTCCACTGCAGGCCACTCAGTAGCACAATCTCCTCCGCAATaGGTGGTGGCTGCATGGGGT | + |
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Preference number: 4 (lower is better) Translates to: VQECSMQHPQSTAGHSVAQSPPQ*VVAAWG Trigger: ACCCCATGCAGCCACCACCCATTGCGGAGGAGATTG...TGCTACTGAGTGGCCTGCAGTGGACTGTGGGTGCTGCATGCTGCACTCCTGAAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015239.10 |
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| CDS-3UTR GCA 90 bp | CATCCAAGGGTGTGGGTTTGGCTGAATATGAAAGGTACCCAGGCAGAAGCCAGCGCCCAGCACGGGCCCTaGAGTTGTCATCTGGTGTGG | + |
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Preference number: 4 (lower is better) Translates to: HPRVWVWLNMKGTQAEASAQHGP*SCHLVW Trigger: CCACACCAGATGACAACTGCAGGGCCCGTGCTGGGC...GCTGGCTTCTGCCTGGGTACCTTTCATATTCAGCCAAACCCACACCCTTGGATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015239.10 |
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| CDS-3UTR CCA 90 bp | CTCCTAAGGCATTGCTGCTATGAGCTACTCTGCCCCAGTGCAATAAAGAACCACGATGTGGCCGCTGGGTaGCGGGGCACATCTCGAGCC | + |
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Preference number: 4 (lower is better) Translates to: LLRHCCYELLCPSAIKNHDVAAG*RGTSRA Trigger: GGCTCGAGATGTGCCCCGCCACCCAGCGGCCACATC...GTGGTTCTTTATTGCACTGGGGCAGAGTAGCTCATAGCAGCAATGCCTTAGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015239.10 |
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| CDS-3UTR CCA 90 bp | TGTGTTGGGGTCAGGCTGCCCCTCCTAAGGCATTGCTGCTATGAGCTACTCTGCGCAGCTCAGCCACCTTaGTCTCCAGTGCACAATCCG | + |
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Preference number: 4 (lower is better) Translates to: CVGVRLPLLRHCCYELLCAAQPP*SPVHNP Trigger: CGGATTGTGCACTGGAGACCAAGGTGGCTGAGCTGC...GCAGAGTAGCTCATAGCAGCAATGCCTTAGGAGGGGCAGCCTGACCCCAACACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015239.10 |
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| CDS-3UTR GCA 90 bp | GAAGCCAGCTTGGACCTGTGTGAGCTGCCAACCCAAGGGAAGAGGGTAGGTGAATCCAGATCTTCACCGTaGAGTCCTTGGAGCAGGAGG | + |
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Preference number: 4 (lower is better) Translates to: EASLDLCELPTQGKRVGESRSSP*SPWSRR Trigger: CCTCCTGCTCCAAGGACTGCACGGTGAAGATCTGGA...TTCACCTACCCTCTTCCCTTGGGTTGGCAGCTCACACAGGTCCAAGCTGGCTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015239.10 |
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| CDS-3UTR GCA 90 bp | TGTGTTGGGGTCAGGCTGCCCCTCCTAAGGCATTGCTGCTATGAGCTACTCTGCTTGACCACATCCTCATaGCGCAGCTTGGCTAGGCAG | + |
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Preference number: 4 (lower is better) Translates to: CVGVRLPLLRHCCYELLCLTTSS*RSLARQ Trigger: CTGCCTAGCCAAGCTGCGGCATGAGGATGTGGTCAA...GCAGAGTAGCTCATAGCAGCAATGCCTTAGGAGGGGCAGCCTGACCCCAACACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015239.10 |
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| CDS-3UTR GCA 90 bp | GTTCAGGAGTGCAGCATGCAGCACCCACAGTCCACTGCAGGCCACTCAGTAGCAGCAGAACACGAACAATaGGTGGTGAACGCCAGGCTT | + |
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Preference number: 4 (lower is better) Translates to: VQECSMQHPQSTAGHSVAAEHEQ*VVNARL Trigger: AAGCCTGGCGTTCACCACGCATTGTTCGTGTTCTGC...TGCTACTGAGTGGCCTGCAGTGGACTGTGGGTGCTGCATGCTGCACTCCTGAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015239.10 |
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| CDS-3UTR CCA 90 bp | CTCCTAAGGCATTGCTGCTATGAGCTACTCTGCCCCAGTGCAATAAAGAACCACCCTCATACCAGGATGTaGCCGCTGGGTGGCGGGGCA | + |
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Preference number: 4 (lower is better) Translates to: LLRHCCYELLCPSAIKNHPHTRM*PLGGGA Trigger: TGCCCCGCCACCCAGCGGCCACATCCTGGTATGAGG...GTGGTTCTTTATTGCACTGGGGCAGAGTAGCTCATAGCAGCAATGCCTTAGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015239.10 |
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| CDS-3UTR CCA 90 bp | TGTGTTGGGGTCAGGCTGCCCCTCCTAAGGCATTGCTGCTATGAGCTACTCTGCTCACCGTGCAGTCCTTaGAGCAGGAGGCAAACTGGT | + |
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Preference number: 4 (lower is better) Translates to: CVGVRLPLLRHCCYELLCSPCSP*SRRQTG Trigger: ACCAGTTTGCCTCCTGCTCCAAGGACTGCACGGTGA...GCAGAGTAGCTCATAGCAGCAATGCCTTAGGAGGGGCAGCCTGACCCCAACACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015239.10 |
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| CDS-3UTR TCA 90 bp | GTGTACCCCAAGCTAGCCAAGAGGCTAGCATGGGATCTGGTGCTGCCAACAAGGCACGTTGACATTCTCTaGCTCCACATCCTGGAAGGC | + |
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Preference number: 4 (lower is better) Translates to: VYPKLAKRLAWDLVLPTRHVDIL*LHILEG Trigger: GCCTTCCAGGATGTGGAGTCAGAGAATGTCAACGTG...CCTTGTTGGCAGCACCAGATCCCATGCTAGCCTCTTGGCTAGCTTGGGGTACAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015239.10 |
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| CDS-3UTR GCA 90 bp | TGTGTACCCCAAGCTAGCCAAGAGGCTAGCATGGGATCTGGTGCTGCCAACAAGAGCAGCCAGCACATCTaGAGGGCCCAAACTCAGGAA | + |
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Preference number: 4 (lower is better) Translates to: CVPQASQEASMGSGAANKSSQHI*RAQTQE Trigger: TTCCTGAGTTTGGGCCCTGCAGATGTGCTGGCTGCT...CTTGTTGGCAGCACCAGATCCCATGCTAGCCTCTTGGCTAGCTTGGGGTACACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015239.10 |
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| CDS-3UTR GCA 90 bp | CCCCTCCTAAGGCATTGCTGCTATGAGCTACTCTGCCCCAGTGCAATAAAGAACGCAATGGGTGGTGGCTaGATGGGGTCGGCTACCACT | + |
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Preference number: 4 (lower is better) Translates to: PLLRHCCYELLCPSAIKNAMGGG*MGSATT Trigger: AGTGGTAGCCGACCCCATGCAGCCACCACCCATTGC...GTTCTTTATTGCACTGGGGCAGAGTAGCTCATAGCAGCAATGCCTTAGGAGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000015239.10 |
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| CDS-3UTR CCA 90 bp | GTTCAGGAGTGCAGCATGCAGCACCCACAGTCCACTGCAGGCCACTCAGTAGCATGTGCAGCAGTGAGATaGTCAGGTCGTTGTTCCAGA | + |
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Preference number: 4 (lower is better) Translates to: VQECSMQHPQSTAGHSVACAAVR*SGRCSR Trigger: TCTGGAACAACGACCTGACCATCTCACTGCTGCACA...TGCTACTGAGTGGCCTGCAGTGGACTGTGGGTGCTGCATGCTGCACTCCTGAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015239.10 |
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| 3UTR CAA 72 bp | TGGCTGAATATGAAAGGTACCCAGGCAGAAGCCAGCTaGGACCTGTGTGAGCTGCCAACCCAAGGGAAGAGG | + |
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Preference number: 4 (lower is better) Translates to: WLNMKGTQAEAS*DLCELPTQGKR Trigger: CCTCTTCCCTTGGGTTGGCAGCTCACACAGGTCCAAGCTGGCTTCTGCCTGGGTACCTTTCATATTCAGCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015239.10 |
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| CDS-3UTR TCA 90 bp | TCCAAGGGTGTGGGTTTGGCTGAATATGAAAGGTACCCAGGCAGAAGCCAGCTTCCTGGAAGGCATTGTTaGGCCACAGCACTGAGCAGG | + |
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Preference number: 4 (lower is better) Translates to: SKGVGLAEYERYPGRSQLPGRHC*ATALSR Trigger: CCTGCTCAGTGCTGTGGCTCAACAATGCCTTCCAGG...AAGCTGGCTTCTGCCTGGGTACCTTTCATATTCAGCCAAACCCACACCCTTGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015239.10 |
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| CDS-3UTR TCA 90 bp | GAAGCCAGCTTGGACCTGTGTGAGCTGCCAACCCAAGGGAAGAGGGTAGGTGAAGCCGCTTTACCACGTTaGCATTCTCTGACTCCACAT | + |
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Preference number: 4 (lower is better) Translates to: EASLDLCELPTQGKRVGEAALPR*HSLTPH Trigger: ATGTGGAGTCAGAGAATGTCAACGTGGTAAAGCGGC...TTCACCTACCCTCTTCCCTTGGGTTGGCAGCTCACACAGGTCCAAGCTGGCTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015239.10 |
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| CDS-3UTR TCA 90 bp | GAAGCCAGCTTGGACCTGTGTGAGCTGCCAACCCAAGGGAAGAGGGTAGGTGAACCTCTCGCATGGTCTTaGGATCAAACACCAGCAAGT | + |
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Preference number: 4 (lower is better) Translates to: EASLDLCELPTQGKRVGEPLAWS*DQTPAS Trigger: ACTTGCTGGTGTTTGATCTCAAGACCATGCGAGAGG...TTCACCTACCCTCTTCCCTTGGGTTGGCAGCTCACACAGGTCCAAGCTGGCTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015239.10 |
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| CDS-3UTR GCA 90 bp | GTTTGGCTGAATATGAAAGGTACCCAGGCAGAAGCCAGCTTGGACCTGTGTGAGTGGGAGAAGCTGAGGTaGAGGACCTGGTCAGTGTGC | + |
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Preference number: 4 (lower is better) Translates to: VWLNMKGTQAEASLDLCEWEKLR*RTWSVC Trigger: GCACACTGACCAGGTCCTGCACCTCAGCTTCTCCCA...CTCACACAGGTCCAAGCTGGCTTCTGCCTGGGTACCTTTCATATTCAGCCAAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015239.10 |
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| CDS-3UTR CCA 90 bp | CATCCAAGGGTGTGGGTTTGGCTGAATATGAAAGGTACCCAGGCAGAAGCCAGCCTGAGGTGCAGGACCTaGTCAGTGTGCTCCTTCAGT | + |
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Preference number: 4 (lower is better) Translates to: HPRVWVWLNMKGTQAEASLRCRT*SVCSFS Trigger: ACTGAAGGAGCACACTGACCAGGTCCTGCACCTCAG...GCTGGCTTCTGCCTGGGTACCTTTCATATTCAGCCAAACCCACACCCTTGGATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015239.10 |
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| CDS-3UTR CCA 90 bp | CCCCTCCTAAGGCATTGCTGCTATGAGCTACTCTGCCCCAGTGCAATAAAGAACAACTGGTACCCCGAGTaGGAGAAGCTGAGGTGCAGG | + |
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Preference number: 4 (lower is better) Translates to: PLLRHCCYELLCPSAIKNNWYPE*EKLRCR Trigger: CCTGCACCTCAGCTTCTCCCACTCGGGGTACCAGTT...GTTCTTTATTGCACTGGGGCAGAGTAGCTCATAGCAGCAATGCCTTAGGAGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000015239.10 |
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| CDS-3UTR CCA 90 bp | AGCTTGGACCTGTGTGAGCTGCCAACCCAAGGGAAGAGGGTAGGTGAAGAACAGCCTCATGCCGCAGCTTaGCTAGGCAGATGTTGTAGT | + |
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Preference number: 4 (lower is better) Translates to: SLDLCELPTQGKRVGEEQPHAAA*LGRCCS Trigger: ACTACAACATCTGCCTAGCCAAGCTGCGGCATGAGG...CTGTTCTTCACCTACCCTCTTCCCTTGGGTTGGCAGCTCACACAGGTCCAAGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015239.10 |
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| CDS-3UTR TCA 90 bp | TCCAAGGGTGTGGGTTTGGCTGAATATGAAAGGTACCCAGGCAGAAGCCAGCTTGCACTGAGCAGGAGGTaGTATCTCCAATGCGGTGCA | + |
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Preference number: 4 (lower is better) Translates to: SKGVGLAEYERYPGRSQLALSRR*YLQCGA Trigger: TGCACCGCATTGGAGATATCACCTCCTGCTCAGTGC...AAGCTGGCTTCTGCCTGGGTACCTTTCATATTCAGCCAAACCCACACCCTTGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015239.10 |
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| CDS-3UTR TCA 90 bp | ACATCCAAGGGTGTGGGTTTGGCTGAATATGAAAGGTACCCAGGCAGAAGCCAGGTTGAGCCACAGCACTaGGCAGGAGGTGATATCTCC | + |
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Preference number: 4 (lower is better) Translates to: TSKGVGLAEYERYPGRSQVEPQH*AGGDIS Trigger: GGAGATATCACCTCCTGCTCAGTGCTGTGGCTCAAC...CTGGCTTCTGCCTGGGTACCTTTCATATTCAGCCAAACCCACACCCTTGGATGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015239.10 |
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| CDS-3UTR GCA 90 bp | TCCAAGGGTGTGGGTTTGGCTGAATATGAAAGGTACCCAGGCAGAAGCCAGCTTAGGACCTGGTCAGTGTaGTCCTTCAGTGTCTGCACC | + |
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Preference number: 4 (lower is better) Translates to: SKGVGLAEYERYPGRSQLRTWSV*SFSVCT Trigger: GGTGCAGACACTGAAGGAGCACACTGACCAGGTCCT...AAGCTGGCTTCTGCCTGGGTACCTTTCATATTCAGCCAAACCCACACCCTTGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015239.10 |
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| CDS-3UTR GCA 90 bp | AGCTTGGACCTGTGTGAGCTGCCAACCCAAGGGAAGAGGGTAGGTGAAGAACAGCTCATATCTGCACTGTaGAGCAGTGAGATGGTCAGG | + |
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Preference number: 4 (lower is better) Translates to: SLDLCELPTQGKRVGEEQLISAL*SSEMVR Trigger: CCTGACCATCTCACTGCTGCACAGTGCAGATATGAG...CTGTTCTTCACCTACCCTCTTCCCTTGGGTTGGCAGCTCACACAGGTCCAAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015239.10 |
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| CDS-3UTR CCA 90 bp | TCCAAGGGTGTGGGTTTGGCTGAATATGAAAGGTACCCAGGCAGAAGCCAGCTTGCAAACCTGGGTCAGTaGCCTCTTCTTCAGTGTCCC | + |
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Preference number: 4 (lower is better) Translates to: SKGVGLAEYERYPGRSQLANLGQ*PLLQCP Trigger: GGGACACTGAAGAAGAGGCCACTGACCCAGGTTTGC...AAGCTGGCTTCTGCCTGGGTACCTTTCATATTCAGCCAAACCCACACCCTTGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015239.10 |
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| CDS-3UTR CCA 90 bp | TCCAAGGGTGTGGGTTTGGCTGAATATGAAAGGTACCCAGGCAGAAGCCAGCTTAGAAGCACTCGTCATTaGGTGTGTAGGCACGGTGCG | + |
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Preference number: 4 (lower is better) Translates to: SKGVGLAEYERYPGRSQLRSTRH*VCRHGA Trigger: CGCACCGTGCCTACACACCCAATGACGAGTGCTTCT...AAGCTGGCTTCTGCCTGGGTACCTTTCATATTCAGCCAAACCCACACCCTTGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015239.10 |
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| CDS-3UTR TCA 90 bp | ACATCCAAGGGTGTGGGTTTGGCTGAATATGAAAGGTACCCAGGCAGAAGCCAGACAGGCCCATGCCAATaGTGTGCCCATGCACATCAA | + |
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Preference number: 4 (lower is better) Translates to: TSKGVGLAEYERYPGRSQTGPCQ*CAHAHQ Trigger: TTGATGTGCATGGGCACATCATTGGCATGGGCCTGT...CTGGCTTCTGCCTGGGTACCTTTCATATTCAGCCAAACCCACACCCTTGGATGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015239.10 |
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| CDS-3UTR CCA 90 bp | CATCCAAGGGTGTGGGTTTGGCTGAATATGAAAGGTACCCAGGCAGAAGCCAGCTCTGACTCCACATCCTaGAAGGCATTGTTGAGCCAC | + |
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Preference number: 4 (lower is better) Translates to: HPRVWVWLNMKGTQAEASSDSTS*KALLSH Trigger: GTGGCTCAACAATGCCTTCCAGGATGTGGAGTCAGA...GCTGGCTTCTGCCTGGGTACCTTTCATATTCAGCCAAACCCACACCCTTGGATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015239.10 |
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| CDS-3UTR CCA 90 bp | TCCACTGCAGGCCACTCAGTAGCAAAAACTGAATTATCAGAGACCAGTGCCTGTAGCGTCATTGCACTCTaGAGGCTTGGTGTGGCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: STAGHSVAKTELSETSACSVIAL*RLGVAL Trigger: CAGGGCCACACCAAGCCTCCAGAGTGCAATGACGCT...ACAGGCACTGGTCTCTGATAATTCAGTTTTTGCTACTGAGTGGCCTGCAGTGGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000015239.10 |
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| CDS-3UTR TCA 90 bp | CTCCTAAGGCATTGCTGCTATGAGCTACTCTGCCCCAGTGCAATAAAGAACCACTGCACTGTGCAGCAGTaGGATGGTCAGGTCGTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: LLRHCCYELLCPSAIKNHCTVQQ*DGQVVV Trigger: AACAACGACCTGACCATCTCACTGCTGCACAGTGCA...GTGGTTCTTTATTGCACTGGGGCAGAGTAGCTCATAGCAGCAATGCCTTAGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015239.10 |
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| CDS-3UTR GCA 90 bp | TCCAAGGGTGTGGGTTTGGCTGAATATGAAAGGTACCCAGGCAGAAGCCAGCTTATATCTCCAATGCGGTaGAGGTTCCCCGAAATGAGG | + |
|
Preference number: 4 (lower is better) Translates to: SKGVGLAEYERYPGRSQLISPMR*RFPEMR Trigger: CCTCATTTCGGGGAACCTGCACCGCATTGGAGATAT...AAGCTGGCTTCTGCCTGGGTACCTTTCATATTCAGCCAAACCCACACCCTTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015239.10 |
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| CDS-3UTR CCA 90 bp | CCCCTCCTAAGGCATTGCTGCTATGAGCTACTCTGCCCCAGTGCAATAAAGAACAGAAGTGTGCAAACCTaGGTCAGTGGCCTCTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: PLLRHCCYELLCPSAIKNRSVQT*VSGLFF Trigger: GAAGAAGAGGCCACTGACCCAGGTTTGCACACTTCT...GTTCTTTATTGCACTGGGGCAGAGTAGCTCATAGCAGCAATGCCTTAGGAGGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015239.10 |
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| CDS-3UTR CCA 90 bp | CCCCTCCTAAGGCATTGCTGCTATGAGCTACTCTGCCCCAGTGCAATAAAGAACAGTTGTCATCTGGTGTaGCAGGATCTGCTTGATGCC | + |
|
Preference number: 4 (lower is better) Translates to: PLLRHCCYELLCPSAIKNSCHLV*QDLLDA Trigger: GGCATCAAGCAGATCCTGCCACACCAGATGACAACT...GTTCTTTATTGCACTGGGGCAGAGTAGCTCATAGCAGCAATGCCTTAGGAGGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015239.10 |
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| CDS-3UTR CCA 90 bp | CTCCTAAGGCATTGCTGCTATGAGCTACTCTGCCCCAGTGCAATAAAGAACCACCCTGCAGTTGTCATCTaGTGTGGCAGGATCTGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: LLRHCCYELLCPSAIKNHPAVVI*CGRICL Trigger: CAAGCAGATCCTGCCACACCAGATGACAACTGCAGG...GTGGTTCTTTATTGCACTGGGGCAGAGTAGCTCATAGCAGCAATGCCTTAGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015239.10 |
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| CDS-3UTR TCA 90 bp | CTCAAGACATCCAAGGGTGTGGGTTTGGCTGAATATGAAAGGTACCCAGGCAGAGTGAGTCATCCTGGTTaGACTGGGAAAACTGGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: LKTSKGVGLAEYERYPGRVSHPG*TGKTGC Trigger: ACACCCAGTTTTCCCAGTTCAACCAGGATGACTCAC...TCTGCCTGGGTACCTTTCATATTCAGCCAAACCCACACCCTTGGATGTCTTGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015239.10 |
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| CDS-3UTR CCA 90 bp | TCCAAGGGTGTGGGTTTGGCTGAATATGAAAGGTACCCAGGCAGAAGCCAGCTTAGCAGTGAGTCATCCTaGTTGAACTGGGAAAACTGG | + |
|
Preference number: 4 (lower is better) Translates to: SKGVGLAEYERYPGRSQLSSESS*LNWENW Trigger: CCAGTTTTCCCAGTTCAACCAGGATGACTCACTGCT...AAGCTGGCTTCTGCCTGGGTACCTTTCATATTCAGCCAAACCCACACCCTTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015239.10 |
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| CDS-3UTR CCA 90 bp | TCCAAGGGTGTGGGTTTGGCTGAATATGAAAGGTACCCAGGCAGAAGCCAGCTTAAACCTTTCTTGACGTaGTCAGAACCAGAAGTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: SKGVGLAEYERYPGRSQLKPFLT*SEPEVC Trigger: GCACACTTCTGGTTCTGACCACGTCAAGAAAGGTTT...AAGCTGGCTTCTGCCTGGGTACCTTTCATATTCAGCCAAACCCACACCCTTGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015239.10 |
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| CDS-3UTR CCA 90 bp | CCCCTCCTAAGGCATTGCTGCTATGAGCTACTCTGCCCCAGTGCAATAAAGAACTGCACATCAATGACATaGTCCAGGGCATCAAAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: PLLRHCCYELLCPSAIKNCTSMT*SRASKK Trigger: CTTCTTTGATGCCCTGGACCATGTCATTGATGTGCA...GTTCTTTATTGCACTGGGGCAGAGTAGCTCATAGCAGCAATGCCTTAGGAGGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015239.10 |
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| CDS-3UTR CCA 90 bp | CTCAAGACATCCAAGGGTGTGGGTTTGGCTGAATATGAAAGGTACCCAGGCAGACTGGCATTGAGGTTCTaGATCTTAAAGAGCCGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: LKTSKGVGLAEYERYPGRLALRF*ILKSRF Trigger: AAAGCGGCTCTTTAAGATCCAGAACCTCAATGCCAG...TCTGCCTGGGTACCTTTCATATTCAGCCAAACCCACACCCTTGGATGTCTTGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015239.10 |
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| CDS CCA 90 bp | GCCCCGGCCCTCGCCCAGCACGGGCCCTGCAGTTGTCATCTGGTGTaGCAGGATCTGCTTGATGCCTGGGTCAGTGGCCTCTTCTTCAGT | + |
|
Preference number: 5 (lower is better) Translates to: APALAQHGPCSCHLV*QDLLDAWVSGLFFS Trigger: ACTGAAGAAGAGGCCACTGACCCAGGCATCAAGCAGATCCTGCCACACCAGATGACAACTGCAGGGCCCGTGCTGGGCGAGGGCCGGGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124375.2 |
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| CDS TCA 90 bp | GCGGGGGCGAGGGCGTGGAGCCTGCAGAACACGAACAATGCGTGGTaGACGCCAGGCTTTGATAGTGGCATCGTCGCTGGCTGTCAGCAA | + |
|
Preference number: 5 (lower is better) Translates to: AGARAWSLQNTNNAW*TPGFDSGIVAGCQQ Trigger: TTGCTGACAGCCAGCGACGATGCCACTATCAAAGCCTGGCGTTCACCACGCATTGTTCGTGTTCTGCAGGCTCCACGCCCTCGCCCCCGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000015239.10 |
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| CDS CCA 90 bp | AGGGTACCATGTCATAGAGCCGCCGGAACTCCTCATACCAGGATGTaGCCGCTGGGTGGCGGGGCACATCTCGAGCCACCTGGTAGTAGC | + |
|
Preference number: 5 (lower is better) Translates to: RVPCHRAAGTPHTRM*PLGGGAHLEPPGSS Trigger: GCTACTACCAGGTGGCTCGAGATGTGCCCCGCCACCCAGCGGCCACATCCTGGTATGAGGAGTTCCGGCGGCTCTATGACATGGTACCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015239.10 |
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| CDS GCA 90 bp | TCGCCCAGCACGGGCCCTGCAGTTGTCATCTGGTGTGGCAGGATCTaGTTGATGCCTGGGTCAGTGGCCTCTTCTTCAGTGTCCCCACCT | + |
|
Preference number: 5 (lower is better) Translates to: SPSTGPAVVIWCGRI*LMPGSVASSSVSPP Trigger: AGGTGGGGACACTGAAGAAGAGGCCACTGACCCAGGCATCAAGCAGATCCTGCCACACCAGATGACAACTGCAGGGCCCGTGCTGGGCGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124375.2 |
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| CDS CCA 90 bp | CATGTCATAGAGCCGCCGGAACTCCTCATACCAGGATGTGGCCGCTaGGTGGCGGGGCACATCTCGAGCCACCTGGTAGTAGCGGTAGAA | + |
|
Preference number: 5 (lower is better) Translates to: HVIEPPELLIPGCGR*VAGHISSHLVVAVE Trigger: TTCTACCGCTACTACCAGGTGGCTCGAGATGTGCCCCGCCACCCAGCGGCCACATCCTGGTATGAGGAGTTCCGGCGGCTCTATGACATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015239.10 |
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| CDS CCA 90 bp | CAAACACCAGCAAGTCAATCTCCTCCGCAATGGGTGGTGGCTGCATaGGGTCGGCTACCACTGAGCCAGGGGGCCAGGCACGGCTATTCA | + |
|
Preference number: 5 (lower is better) Translates to: QTPASQSPPQWVVAA*GRLPLSQGARHGYS Trigger: TGAATAGCCGTGCCTGGCCCCCTGGCTCAGTGGTAGCCGACCCCATGCAGCCACCACCCATTGCGGAGGAGATTGACTTGCTGGTGTTTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000015239.10 ENSMUST00000124375.2 |
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| CDS TCA 90 bp | AATCTCCTCCGCAATGGGTGGTGGCTGCATGGGGTCGGCTACCACTaGGCCAGGGGGCCAGGCACGGCTATTCACATACAGGTACCTGTT | + |
|
Preference number: 5 (lower is better) Translates to: NLLRNGWWLHGVGYH*ARGPGTAIHIQVPV Trigger: AACAGGTACCTGTATGTGAATAGCCGTGCCTGGCCCCCTGGCTCAGTGGTAGCCGACCCCATGCAGCCACCACCCATTGCGGAGGAGATT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000015239.10 ENSMUST00000124375.2 |
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| CDS CCA 90 bp | GAGGCAAACTGGTACCCCGAGTGGGAGAAGCTGAGGTGCAGGACCTaGTCAGTGTGCTCCTTCAGTGTCTGCACCTCCACACAGGGTACC | + |
|
Preference number: 5 (lower is better) Translates to: EANWYPEWEKLRCRT*SVCSFSVCTSTQGT Trigger: GGTACCCTGTGTGGAGGTGCAGACACTGAAGGAGCACACTGACCAGGTCCTGCACCTCAGCTTCTCCCACTCGGGGTACCAGTTTGCCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015239.10 |
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| CDS CCA 90 bp | GGAGACAGGCCCATGCCAATGATGTGCCCATGCACATCAATGACATaGTCCAGGGCATCAAAGAAGGCATCAGAGCCCCGGCCCTCGCCC | + |
|
Preference number: 5 (lower is better) Translates to: GDRPMPMMCPCTSMT*SRASKKASEPRPSP Trigger: GGGCGAGGGCCGGGGCTCTGATGCCTTCTTTGATGCCCTGGACCATGTCATTGATGTGCATGGGCACATCATTGGCATGGGCCTGTCTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015239.10 ENSMUST00000124375.2 |
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| CDS-3UTR CAA 90 bp | GAAGCCAGCTTGGACCTGTGTGAGCTGCCAACCCAAGGGAAGAGGGTAGGTGAAGCACGGGCCCTGCAGTaGTCATCTGGTGTGGCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: EASLDLCELPTQGKRVGEARALQ*SSGVAG Trigger: TCCTGCCACACCAGATGACAACTGCAGGGCCCGTGC...TTCACCTACCCTCTTCCCTTGGGTTGGCAGCTCACACAGGTCCAAGCTGGCTTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015239.10 |
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| CDS TCA 90 bp | AGTCCTTGGAGCAGGAGGCAAACTGGTACCCCGAGTGGGAGAAGCTaGGGTGCAGGACCTGGTCAGTGTGCTCCTTCAGTGTCTGCACCT | + |
|
Preference number: 5 (lower is better) Translates to: SPWSRRQTGTPSGRS*GAGPGQCAPSVSAP Trigger: AGGTGCAGACACTGAAGGAGCACACTGACCAGGTCCTGCACCTCAGCTTCTCCCACTCGGGGTACCAGTTTGCCTCCTGCTCCAAGGACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015239.10 |
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| CDS CCA 90 bp | TTCACCGTGCAGTCCTTGGAGCAGGAGGCAAACTGGTACCCCGAGTaGGAGAAGCTGAGGTGCAGGACCTGGTCAGTGTGCTCCTTCAGT | + |
|
Preference number: 5 (lower is better) Translates to: FTVQSLEQEANWYPE*EKLRCRTWSVCSFS Trigger: ACTGAAGGAGCACACTGACCAGGTCCTGCACCTCAGCTTCTCCCACTCGGGGTACCAGTTTGCCTCCTGCTCCAAGGACTGCACGGTGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015239.10 |
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| CDS-3UTR CAA 90 bp | CATCCAAGGGTGTGGGTTTGGCTGAATATGAAAGGTACCCAGGCAGAAGCCAGCGGACACAGCCTGCCATaGGCGGCATACCAGCCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: HPRVWVWLNMKGTQAEASGHSLP*AAYQPS Trigger: GCTGGGCTGGTATGCCGCCAATGGCAGGCTGTGTCC...GCTGGCTTCTGCCTGGGTACCTTTCATATTCAGCCAAACCCACACCCTTGGATG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015239.10 |
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| CDS CCA 90 bp | TTGTTCCAGATCTTCACCGTGCAGTCCTTGGAGCAGGAGGCAAACTaGTACCCCGAGTGGGAGAAGCTGAGGTGCAGGACCTGGTCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: LFQIFTVQSLEQEAN*YPEWEKLRCRTWSV Trigger: CACTGACCAGGTCCTGCACCTCAGCTTCTCCCACTCGGGGTACCAGTTTGCCTCCTGCTCCAAGGACTGCACGGTGAAGATCTGGAACAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015239.10 |
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| CDS CCA 90 bp | TTGATAGTGGCATCGTCGCTGGCTGTCAGCAAGAGTTCCTGCTCCTaGGGGCTAAAAGCCACGGAGTTGACCACATCCTCATGCCGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: LIVASSLAVSKSSCS*GLKATELTTSSCRS Trigger: GCTGCGGCATGAGGATGTGGTCAACTCCGTGGCTTTTAGCCCCCAGGAGCAGGAACTCTTGCTGACAGCCAGCGACGATGCCACTATCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015239.10 |
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| CDS GCA 90 bp | CAGGCTTTGATAGTGGCATCGTCGCTGGCTGTCAGCAAGAGTTCCTaGTCCTGGGGGCTAAAAGCCACGGAGTTGACCACATCCTCATGC | + |
|
Preference number: 5 (lower is better) Translates to: QALIVASSLAVSKSS*SWGLKATELTTSSC Trigger: GCATGAGGATGTGGTCAACTCCGTGGCTTTTAGCCCCCAGGAGCAGGAACTCTTGCTGACAGCCAGCGACGATGCCACTATCAAAGCCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000015239.10 |
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| CDS GCA 90 bp | TTGTTGAGCCACAGCACTGAGCAGGAGGTGATATCTCCAATGCGGTaGAGGTTCCCCGAAATGAGGCTGGTTTCTGTGAGCCAGCAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: LLSHSTEQEVISPMR*RFPEMRLVSVSQQP Trigger: TGGCTGCTGGCTCACAGAAACCAGCCTCATTTCGGGGAACCTGCACCGCATTGGAGATATCACCTCCTGCTCAGTGCTGTGGCTCAACAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015239.10 |
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| CDS-3UTR CAA 90 bp | GTTCAGGAGTGCAGCATGCAGCACCCACAGTCCACTGCAGGCCACTCAGTAGCACGGATGGTGCTGGCATaGAGGTTCTGGATCTTAAAG | + |
|
Preference number: 5 (lower is better) Translates to: VQECSMQHPQSTAGHSVARMVLA*RFWILK Trigger: CTTTAAGATCCAGAACCTCAATGCCAGCACCATCCG...TGCTACTGAGTGGCCTGCAGTGGACTGTGGGTGCTGCATGCTGCACTCCTGAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015239.10 |
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| CDS GCA 90 bp | AACACACGCCGTAAACCTTTCTTGACGTGGTCAGAACCAGAAGTGTaGAAACCTGGGTCAGTGGCCTCTTCTTCAGTGTCCCCACCTAGG | + |
|
Preference number: 5 (lower is better) Translates to: NTRRKPFLTWSEPEV*KPGSVASSSVSPPR Trigger: CCTAGGTGGGGACACTGAAGAAGAGGCCACTGACCCAGGTTTGCACACTTCTGGTTCTGACCACGTCAAGAAAGGTTTACGGCGTGTGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015239.10 |
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| CDS-3UTR CAA 90 bp | TGTGTACCCCAAGCTAGCCAAGAGGCTAGCATGGGATCTGGTGCTGCCAACAAGAGTGAGTCATCCTGGTaGAACTGGGAAAACTGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: CVPQASQEASMGSGAANKSESSW*NWENWV Trigger: CACCCAGTTTTCCCAGTTCAACCAGGATGACTCACT...CTTGTTGGCAGCACCAGATCCCATGCTAGCCTCTTGGCTAGCTTGGGGTACACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015239.10 |
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| CDS-3UTR CAA 90 bp | AGCTTGGACCTGTGTGAGCTGCCAACCCAAGGGAAGAGGGTAGGTGAAGAACAGAGCCGCTTTACCACGTaGACATTCTCTGACTCCACA | + |
|
Preference number: 5 (lower is better) Translates to: SLDLCELPTQGKRVGEEQSRFTT*TFSDST Trigger: TGTGGAGTCAGAGAATGTCAACGTGGTAAAGCGGCT...CTGTTCTTCACCTACCCTCTTCCCTTGGGTTGGCAGCTCACACAGGTCCAAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015239.10 |
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| CDS-3UTR CAA 90 bp | CTCCTAAGGCATTGCTGCTATGAGCTACTCTGCCCCAGTGCAATAAAGAACCACAGCAGCTCAGCCACCTaGGTCTCCAGTGCACAATCC | + |
|
Preference number: 5 (lower is better) Translates to: LLRHCCYELLCPSAIKNHSSSAT*VSSAQS Trigger: GGATTGTGCACTGGAGACCAAGGTGGCTGAGCTGCT...GTGGTTCTTTATTGCACTGGGGCAGAGTAGCTCATAGCAGCAATGCCTTAGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015239.10 |
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| CDS-3UTR CAA 90 bp | CTCCTAAGGCATTGCTGCTATGAGCTACTCTGCCCCAGTGCAATAAAGAACCACCTGGTGTCAGCGTCATaGCACTCTGGAGGCTTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: LLRHCCYELLCPSAIKNHLVSAS*HSGGLV Trigger: CACCAAGCCTCCAGAGTGCAATGACGCTGACACCAG...GTGGTTCTTTATTGCACTGGGGCAGAGTAGCTCATAGCAGCAATGCCTTAGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015239.10 |
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| CDS-3UTR CAA 90 bp | GTTTGGCTGAATATGAAAGGTACCCAGGCAGAAGCCAGCTTGGACCTGTGTGAGCTAAAAGCCACGGAGTaGACCACATCCTCATGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: VWLNMKGTQAEASLDLCELKATE*TTSSCR Trigger: GCGGCATGAGGATGTGGTCAACTCCGTGGCTTTTAG...CTCACACAGGTCCAAGCTGGCTTCTGCCTGGGTACCTTTCATATTCAGCCAAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015239.10 |
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| CDS CCA 90 bp | AACTCCAGTTGTATGGCCTCATATCTGCACTGTGCAGCAGTGAGATaGTCAGGTCGTTGTTCCAGATCTTCACCGTGCAGTCCTTGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: NSSCMASYLHCAAVR*SGRCSRSSPCSPWS Trigger: GCTCCAAGGACTGCACGGTGAAGATCTGGAACAACGACCTGACCATCTCACTGCTGCACAGTGCAGATATGAGGCCATACAACTGGAGTT 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015239.10 |
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| CDS CCA 90 bp | CAGTCAGCCACCATCACTGTGCGGATGGTGCTGGCATTGAGGTTCTaGATCTTAAAGAGCCGCTTTACCACGTTGACATTCTCTGACTCC | + |
|
Preference number: 5 (lower is better) Translates to: QSATITVRMVLALRF*ILKSRFTTLTFSDS Trigger: GGAGTCAGAGAATGTCAACGTGGTAAAGCGGCTCTTTAAGATCCAGAACCTCAATGCCAGCACCATCCGCACAGTGATGGTGGCTGACTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015239.10 ENSMUST00000124375.2 |
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| CDS-3UTR CAA 90 bp | CCCCTCCTAAGGCATTGCTGCTATGAGCTACTCTGCCCCAGTGCAATAAAGAACGAGATGGTCAGGTCGTaGTTCCAGATCTTCACCGTG | + |
|
Preference number: 5 (lower is better) Translates to: PLLRHCCYELLCPSAIKNEMVRS*FQIFTV Trigger: CACGGTGAAGATCTGGAACAACGACCTGACCATCTC...GTTCTTTATTGCACTGGGGCAGAGTAGCTCATAGCAGCAATGCCTTAGGAGGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015239.10 |
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| CDS GCA 90 bp | ACATACAGGTACCTGTTATCAGGAGACAGGCCCATGCCAATGATGTaGCCATGCACATCAATGACATGGTCCAGGGCATCAAAGAAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: TYRYLLSGDRPMPMM*PCTSMTWSRASKKA Trigger: TGCCTTCTTTGATGCCCTGGACCATGTCATTGATGTGCATGGGCACATCATTGGCATGGGCCTGTCTCCTGATAACAGGTACCTGTATGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015239.10 ENSMUST00000124375.2 |
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| CDS CCA 72 bp | GAGCCGCCGGAACTCCTCATACCAGGATGTGGCCGCTaGGTGGCGGGGCACATCTCGAGCCACCTGGTAGTA | + |
|
Preference number: 6 (lower is better) Translates to: EPPELLIPGCGR*VAGHISSHLVV Trigger: TACTACCAGGTGGCTCGAGATGTGCCCCGCCACCCAGCGGCCACATCCTGGTATGAGGAGTTCCGGCGGCTC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015239.10 |
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| CDS CCA 72 bp | CGGCCCTCGCCCAGCACGGGCCCTGCAGTTGTCATCTaGTGTGGCAGGATCTGCTTGATGCCTGGGTCAGTG | + |
|
Preference number: 6 (lower is better) Translates to: RPSPSTGPAVVI*CGRICLMPGSV Trigger: CACTGACCCAGGCATCAAGCAGATCCTGCCACACCAGATGACAACTGCAGGGCCCGTGCTGGGCGAGGGCCG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124375.2 |
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| CDS TCA 72 bp | CGCAATGGGTGGTGGCTGCATGGGGTCGGCTACCACTaGGCCAGGGGGCCAGGCACGGCTATTCACATACAG | + |
|
Preference number: 6 (lower is better) Translates to: RNGWWLHGVGYH*ARGPGTAIHIQ Trigger: CTGTATGTGAATAGCCGTGCCTGGCCCCCTGGCTCAGTGGTAGCCGACCCCATGCAGCCACCACCCATTGCG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000015239.10 ENSMUST00000124375.2 |
||
| CDS GCA 72 bp | ACCAGCAAGTCAATCTCCTCCGCAATGGGTGGTGGCTaGATGGGGTCGGCTACCACTGAGCCAGGGGGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: TSKSISSAMGGG*MGSATTEPGGQ Trigger: CTGGCCCCCTGGCTCAGTGGTAGCCGACCCCATGCAGCCACCACCCATTGCGGAGGAGATTGACTTGCTGGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000015239.10 ENSMUST00000124375.2 |
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| CDS CCA 72 bp | TGTCATAGAGCCGCCGGAACTCCTCATACCAGGATGTaGCCGCTGGGTGGCGGGGCACATCTCGAGCCACCT | + |
|
Preference number: 6 (lower is better) Translates to: CHRAAGTPHTRM*PLGGGAHLEPP Trigger: AGGTGGCTCGAGATGTGCCCCGCCACCCAGCGGCCACATCCTGGTATGAGGAGTTCCGGCGGCTCTATGACA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015239.10 |
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| CDS CCA 72 bp | CTCGCCCAGCACGGGCCCTGCAGTTGTCATCTGGTGTaGCAGGATCTGCTTGATGCCTGGGTCAGTGGCCTC | + |
|
Preference number: 6 (lower is better) Translates to: LAQHGPCSCHLV*QDLLDAWVSGL Trigger: GAGGCCACTGACCCAGGCATCAAGCAGATCCTGCCACACCAGATGACAACTGCAGGGCCCGTGCTGGGCGAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124375.2 |
||
| CDS CAA 90 bp | CCCAGCACGGGCCCTGCAGTTGTCATCTGGTGTGGCAGGATCTGCTaGATGCCTGGGTCAGTGGCCTCTTCTTCAGTGTCCCCACCTAGG | + |
|
Preference number: 6 (lower is better) Translates to: PSTGPAVVIWCGRIC*MPGSVASSSVSPPR Trigger: CCTAGGTGGGGACACTGAAGAAGAGGCCACTGACCCAGGCATCAAGCAGATCCTGCCACACCAGATGACAACTGCAGGGCCCGTGCTGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124375.2 |
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| CDS CCA 72 bp | CAGTCCTTGGAGCAGGAGGCAAACTGGTACCCCGAGTaGGAGAAGCTGAGGTGCAGGACCTGGTCAGTGTGC | + |
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Preference number: 6 (lower is better) Translates to: QSLEQEANWYPE*EKLRCRTWSVC Trigger: GCACACTGACCAGGTCCTGCACCTCAGCTTCTCCCACTCGGGGTACCAGTTTGCCTCCTGCTCCAAGGACTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015239.10 |
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| CDS TCA 72 bp | AGGGCGTGGAGCCTGCAGAACACGAACAATGCGTGGTaGACGCCAGGCTTTGATAGTGGCATCGTCGCTGGC | + |
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Preference number: 6 (lower is better) Translates to: RAWSLQNTNNAW*TPGFDSGIVAG Trigger: GCCAGCGACGATGCCACTATCAAAGCCTGGCGTTCACCACGCATTGTTCGTGTTCTGCAGGCTCCACGCCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015239.10 |
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| CDS GCA 72 bp | TGCTCCTTCCATAAGAACTCATCCCGGGACACAGCCTaGCATTGGCGGCATACCAGCCCAGCAGCCAGCACA | + |
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Preference number: 6 (lower is better) Translates to: CSFHKNSSRDTA*HWRHTSPAAST Trigger: TGTGCTGGCTGCTGGGCTGGTATGCCGCCAATGGCAGGCTGTGTCCCGGGATGAGTTCTTATGGAAGGAGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015239.10 |
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| CDS CCA 72 bp | TGGTACCCCGAGTGGGAGAAGCTGAGGTGCAGGACCTaGTCAGTGTGCTCCTTCAGTGTCTGCACCTCCACA | + |
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Preference number: 6 (lower is better) Translates to: WYPEWEKLRCRT*SVCSFSVCTST Trigger: TGTGGAGGTGCAGACACTGAAGGAGCACACTGACCAGGTCCTGCACCTCAGCTTCTCCCACTCGGGGTACCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015239.10 |
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| CDS CAA 90 bp | CGTGGAGCCTGCAGAACACGAACAATGCGTGGTGAACGCCAGGCTTaGATAGTGGCATCGTCGCTGGCTGTCAGCAAGAGTTCCTGCTCC | + |
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Preference number: 6 (lower is better) Translates to: RGACRTRTMRGERQA*IVASSLAVSKSSCS Trigger: GGAGCAGGAACTCTTGCTGACAGCCAGCGACGATGCCACTATCAAAGCCTGGCGTTCACCACGCATTGTTCGTGTTCTGCAGGCTCCACG 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015239.10 |
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| CDS GCA 72 bp | ACGGGCCCTGCAGTTGTCATCTGGTGTGGCAGGATCTaGTTGATGCCTGGGTCAGTGGCCTCTTCTTCAGTG | + |
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Preference number: 6 (lower is better) Translates to: TGPAVVIWCGRI*LMPGSVASSSV Trigger: CACTGAAGAAGAGGCCACTGACCCAGGCATCAAGCAGATCCTGCCACACCAGATGACAACTGCAGGGCCCGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124375.2 |
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| CDS CCA 72 bp | GCATCGTCGCTGGCTGTCAGCAAGAGTTCCTGCTCCTaGGGGCTAAAAGCCACGGAGTTGACCACATCCTCA | + |
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Preference number: 6 (lower is better) Translates to: ASSLAVSKSSCS*GLKATELTTSS Trigger: TGAGGATGTGGTCAACTCCGTGGCTTTTAGCCCCCAGGAGCAGGAACTCTTGCTGACAGCCAGCGACGATGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015239.10 |
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| CDS CAA 72 bp | GTCAGGTCGTTGTTCCAGATCTTCACCGTGCAGTCCTaGGAGCAGGAGGCAAACTGGTACCCCGAGTGGGAG | + |
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Preference number: 6 (lower is better) Translates to: VRSLFQIFTVQS*EQEANWYPEWE Trigger: CTCCCACTCGGGGTACCAGTTTGCCTCCTGCTCCAAGGACTGCACGGTGAAGATCTGGAACAACGACCTGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015239.10 |
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| CDS CAA 72 bp | AAGAGTTCCTGCTCCTGGGGGCTAAAAGCCACGGAGTaGACCACATCCTCATGCCGCAGCTTGGCTAGGCAG | + |
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Preference number: 6 (lower is better) Translates to: KSSCSWGLKATE*TTSSCRSLARQ Trigger: CTGCCTAGCCAAGCTGCGGCATGAGGATGTGGTCAACTCCGTGGCTTTTAGCCCCCAGGAGCAGGAACTCTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000015239.10 ENSMUST00000124375.2 |
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| CDS GCA 72 bp | ATAGTGGCATCGTCGCTGGCTGTCAGCAAGAGTTCCTaGTCCTGGGGGCTAAAAGCCACGGAGTTGACCACA | + |
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Preference number: 6 (lower is better) Translates to: IVASSLAVSKSS*SWGLKATELTT Trigger: TGTGGTCAACTCCGTGGCTTTTAGCCCCCAGGAGCAGGAACTCTTGCTGACAGCCAGCGACGATGCCACTAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000015239.10 |
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| CDS CCA 72 bp | TCAGGTCGTTGTTCCAGATCTTCACCGTGCAGTCCTTaGAGCAGGAGGCAAACTGGTACCCCGAGTGGGAGA | + |
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Preference number: 6 (lower is better) Translates to: SGRCSRSSPCSP*SRRQTGTPSGR Trigger: TCTCCCACTCGGGGTACCAGTTTGCCTCCTGCTCCAAGGACTGCACGGTGAAGATCTGGAACAACGACCTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015239.10 |
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| CDS TCA 72 bp | GTGTGGCAGGATCTGCTTGATGCCGATCTGATGCGGTaGGTACGTGAGGCAGCCAGTGGTGAAGATGAGGTA | + |
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Preference number: 6 (lower is better) Translates to: VWQDLLDADLMR*VREAASGEDEV Trigger: TACCTCATCTTCACCACTGGCTGCCTCACGTACTCACCGCATCAGATCGGCATCAAGCAGATCCTGCCACAC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015239.10 |
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| CDS GCA 72 bp | CACAGCACTGAGCAGGAGGTGATATCTCCAATGCGGTaGAGGTTCCCCGAAATGAGGCTGGTTTCTGTGAGC | + |
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Preference number: 6 (lower is better) Translates to: HSTEQEVISPMR*RFPEMRLVSVS Trigger: GCTCACAGAAACCAGCCTCATTTCGGGGAACCTGCACCGCATTGGAGATATCACCTCCTGCTCAGTGCTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015239.10 |
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| CDS CCA 72 bp | CGTGGTCAGAACCAGAAGTGTGCAAACCTGGGTCAGTaGCCTCTTCTTCAGTGTCCCCACCTAGGTCAAAGA | + |
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Preference number: 6 (lower is better) Translates to: RGQNQKCANLGQ*PLLQCPHLGQR Trigger: TCTTTGACCTAGGTGGGGACACTGAAGAAGAGGCCACTGACCCAGGTTTGCACACTTCTGGTTCTGACCACG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015239.10 |
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| CDS CAA 72 bp | CAGTCAGCCACCATCACTGTGCGGATGGTGCTGGCATaGAGGTTCTGGATCTTAAAGAGCCGCTTTACCACG | + |
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Preference number: 6 (lower is better) Translates to: QSATITVRMVLA*RFWILKSRFTT Trigger: CGTGGTAAAGCGGCTCTTTAAGATCCAGAACCTCAATGCCAGCACCATCCGCACAGTGATGGTGGCTGACTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015239.10 ENSMUST00000124375.2 |
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| CDS CAA 72 bp | TGCAGAACACGAACAATGCGTGGTGAACGCCAGGCTTaGATAGTGGCATCGTCGCTGGCTGTCAGCAAGAGT | + |
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Preference number: 6 (lower is better) Translates to: CRTRTMRGERQA*IVASSLAVSKS Trigger: ACTCTTGCTGACAGCCAGCGACGATGCCACTATCAAAGCCTGGCGTTCACCACGCATTGTTCGTGTTCTGCA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015239.10 |
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| CDS TCA 72 bp | ACACCCCTGAGGCCAGCAGCAGTGAGTCATCCTGGTTaGACTGGGAAAACTGGGTGTAACTCCAGTTGTATG | + |
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Preference number: 6 (lower is better) Translates to: TPLRPAAVSHPG*TGKTGCNSSCM Trigger: CATACAACTGGAGTTACACCCAGTTTTCCCAGTTCAACCAGGATGACTCACTGCTGCTGGCCTCAGGGGTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015239.10 |
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| CDS CAA 90 bp | AAGCGGCTACAGTCAGCCACCATCACTGTGCGGATGGTGCTGGCATaGAGGTTCTGGATCTTAAAGAGCCGCTTTACCACGTTGACATTC | + |
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Preference number: 6 (lower is better) Translates to: KRLQSATITVRMVLA*RFWILKSRFTTLTF Trigger: GAATGTCAACGTGGTAAAGCGGCTCTTTAAGATCCAGAACCTCAATGCCAGCACCATCCGCACAGTGATGGTGGCTGACTGTAGCCGCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015239.10 ENSMUST00000124375.2 |
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| CDS GCA 72 bp | CGTAAACCTTTCTTGACGTGGTCAGAACCAGAAGTGTaGAAACCTGGGTCAGTGGCCTCTTCTTCAGTGTCC | + |
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Preference number: 6 (lower is better) Translates to: RKPFLTWSEPEV*KPGSVASSSVS Trigger: GGACACTGAAGAAGAGGCCACTGACCCAGGTTTGCACACTTCTGGTTCTGACCACGTCAAGAAAGGTTTACG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015239.10 |
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| CDS GCA 72 bp | TACCTGTTATCAGGAGACAGGCCCATGCCAATGATGTaGCCATGCACATCAATGACATGGTCCAGGGCATCA | + |
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Preference number: 6 (lower is better) Translates to: YLLSGDRPMPMM*PCTSMTWSRAS Trigger: TGATGCCCTGGACCATGTCATTGATGTGCATGGGCACATCATTGGCATGGGCCTGTCTCCTGATAACAGGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015239.10 ENSMUST00000124375.2 |
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| CDS CCA 72 bp | TGTATGGCCTCATATCTGCACTGTGCAGCAGTGAGATaGTCAGGTCGTTGTTCCAGATCTTCACCGTGCAGT | + |
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Preference number: 6 (lower is better) Translates to: CMASYLHCAAVR*SGRCSRSSPCS Trigger: ACTGCACGGTGAAGATCTGGAACAACGACCTGACCATCTCACTGCTGCACAGTGCAGATATGAGGCCATACA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015239.10 |
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| CDS CCA 72 bp | ACCATCACTGTGCGGATGGTGCTGGCATTGAGGTTCTaGATCTTAAAGAGCCGCTTTACCACGTTGACATTC | + |
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Preference number: 6 (lower is better) Translates to: TITVRMVLALRF*ILKSRFTTLTF Trigger: GAATGTCAACGTGGTAAAGCGGCTCTTTAAGATCCAGAACCTCAATGCCAGCACCATCCGCACAGTGATGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015239.10 ENSMUST00000124375.2 |
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