Pregenerated sensors for FBXW27 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000104614Ensembl transcript IDs: ENSMUST00000197125.3, ENSMUST00000199430.5, ENSMUST00000211814.2, ENSMUST00000212725.2
Found 81 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GACACACAAACTGCTAAGTTTTCAAGAGCAGATATTCAAGGCATATaGCATCAGAAACCAGGTGTCATGACCATCTATCATCAACTGAAT | + |
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Preference number: 1 (lower is better) Translates to: DTQTAKFSRADIQGI*HQKPGVMTIYHQLN Trigger: ATTCAGTTGATGATAGATGGTCATGACACCTGGTTTCTGATGGCATATGCCTTGAATATCTGCTCTTGAAAACTTAGCAGTTTGTGTGTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000197125.3 ENSMUST00000211814.2 |
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| 3UTR-3UTR TCA 90 bp | GGCATATGCCATCAGAAACCAGGTGTCATGACCATCTATCATCAACTGAATTATGTCGATAACACTTCCTaGGCAGCAGGCTTCTCTCCT | + |
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Preference number: 2 (lower is better) Translates to: GICHQKPGVMTIYHQLNYVDNTS*AAGFSP Trigger: AGGAGAGAAGCCTGCTGCTCAGGAAGTGTTATCGAC...ATAATTCAGTTGATGATAGATGGTCATGACACCTGGTTTCTGATGGCATATGCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211814.2 |
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| 3UTR-3UTR GCA 90 bp | TCAAGGCATATGCCATCAGAAACCAGGTGTCATGACCATCTATCATCAACTGAAGATATTCAAGGCATATaGCATCAGAAACCAGGTGTC | + |
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Preference number: 2 (lower is better) Translates to: SRHMPSETRCHDHLSSTEDIQGI*HQKPGV Trigger: GACACCTGGTTTCTGATGGCATATGCCTTGAATATC...TTCAGTTGATGATAGATGGTCATGACACCTGGTTTCTGATGGCATATGCCTTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000197125.3 ENSMUST00000211814.2 |
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| 3UTR-3UTR TCA 90 bp | TCAAGGCATATGCCATCAGAAACCAGGTGTCATGACCATCTATCATCAACTGAAGACCTTTATTATCATTaGGGAAGAGGACACACAAAC | + |
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Preference number: 2 (lower is better) Translates to: SRHMPSETRCHDHLSSTEDLYYH*GRGHTN Trigger: GTTTGTGTGTCCTCTTCCTCAATGATAATAAAGGTC...TTCAGTTGATGATAGATGGTCATGACACCTGGTTTCTGATGGCATATGCCTTGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000197125.3 ENSMUST00000211814.2 |
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| 3UTR-3UTR GCA 90 bp | TCAAGAGCAGATATTCAAGGCATATGCCATCAGAAACCAGGTGTCATGACCATCTCATCAACTGAATTATaGTCACATCATCACATAGCG | + |
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Preference number: 2 (lower is better) Translates to: SRADIQGICHQKPGVMTISSTEL*SHHHIA Trigger: CGCTATGTGATGATGTGAGCATAATTCAGTTGATGA...GATGGTCATGACACCTGGTTTCTGATGGCATATGCCTTGAATATCTGCTCTTGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000197125.3 ENSMUST00000211814.2 |
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| 3UTR TCA 72 bp | ACAGATGTCTCCTGTTTTTCAGTCGATAACACTTCCTaGGCAGCAGGCTTCTCTCCTCCCATGCATATACAT | + |
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Preference number: 3 (lower is better) Translates to: TDVSCFSVDNTS*AAGFSPPMHIH Trigger: ATGTATATGCATGGGAGGAGAGAAGCCTGCTGCTCAGGAAGTGTTATCGACTGAAAAACAGGAGACATCTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000211814.2 |
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| 3UTR GCA 72 bp | ACTGCTAAGTTTTCAAGAGCAGATATTCAAGGCATATaGCATCAGAAACCAGGTGTCATGACCATCTATCAT | + |
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Preference number: 3 (lower is better) Translates to: TAKFSRADIQGI*HQKPGVMTIYH Trigger: ATGATAGATGGTCATGACACCTGGTTTCTGATGGCATATGCCTTGAATATCTGCTCTTGAAAACTTAGCAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000197125.3 ENSMUST00000211814.2 |
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| CDS-3UTR TCA 90 bp | ATGCCATCAGAAACCAGGTGTCATGACCATCTATCATCAACTGAATTATGCTCACCTGGAGCTGTAGGGTaGCCATGTCACAGAAAAGCC | + |
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Preference number: 4 (lower is better) Translates to: MPSETRCHDHLSSTELCSPGAVG*PCHRKA Trigger: GGCTTTTCTGTGACATGGTCACCCTACAGCTCCAGG...TGAGCATAATTCAGTTGATGATAGATGGTCATGACACCTGGTTTCTGATGGCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197125.3 |
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| CDS-3UTR TCA 90 bp | CTTGCAAATAGACCTTTATTATCATTGAGGAAGAGGACACACAAACTGCTAAGTCCTGGAGCTGTAGGGTaGCCATGTCACAGAAAAGCC | + |
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Preference number: 4 (lower is better) Translates to: LANRPLLSLRKRTHKLLSPGAVG*PCHRKA Trigger: GGCTTTTCTGTGACATGGTCACCCTACAGCTCCAGG...ACTTAGCAGTTTGTGTGTCCTCTTCCTCAATGATAATAAAGGTCTATTTGCAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199430.5 |
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| CDS-3UTR CCA 90 bp | GGCATATGCCATCAGAAACCAGGTGTCATGACCATCTATCATCAACTGAATTATCATGTCTCTTTGTCCTaGAGCTGTAGGGTGACCATG | + |
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Preference number: 4 (lower is better) Translates to: GICHQKPGVMTIYHQLNYHVSLS*SCRVTM Trigger: CATGGTCACCCTACAGCTCCAGGACAAAGAGACATG...ATAATTCAGTTGATGATAGATGGTCATGACACCTGGTTTCTGATGGCATATGCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197125.3 |
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| CDS-3UTR TCA 90 bp | CAGAAACCAGGTGTCATGACCATCTATCATCAACTGAATTATGCTCACATCATCAAAAGCCATCTCTTCTaGCACAACTTCCTCCACAGG | + |
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Preference number: 4 (lower is better) Translates to: QKPGVMTIYHQLNYAHIIKSHLF*HNFLHR Trigger: CCTGTGGAGGAAGTTGTGTCAGAAGAGATGGCTTTT...GATGATGTGAGCATAATTCAGTTGATGATAGATGGTCATGACACCTGGTTTCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197125.3 |
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| CDS-3UTR TCA 90 bp | CTTGCAAATAGACCTTTATTATCATTGAGGAAGAGGACACACAAACTGCTAAGTGTCGATAACACTTCCTaGGCAGCAGGCTTCTCTCCT | + |
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Preference number: 4 (lower is better) Translates to: LANRPLLSLRKRTHKLLSVDNTS*AAGFSP Trigger: AGGAGAGAAGCCTGCTGCTCAGGAAGTGTTATCGAC...ACTTAGCAGTTTGTGTGTCCTCTTCCTCAATGATAATAAAGGTCTATTTGCAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199430.5 |
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| CDS-3UTR GCA 90 bp | GGGCTTGCAAATAGACCTTTATTATCATTGAGGAAGAGGACACACAAACTGCTAGCTTCTCTCCTCCCATaGATATACATCCAAAGAGCC | + |
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Preference number: 4 (lower is better) Translates to: GLANRPLLSLRKRTHKLLASLLP*IYIQRA Trigger: GGCTCTTTGGATGTATATGCATGGGAGGAGAGAAGC...TAGCAGTTTGTGTGTCCTCTTCCTCAATGATAATAAAGGTCTATTTGCAAGCCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199430.5 |
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| CDS-3UTR TCA 90 bp | ATGCCATCAGAAACCAGGTGTCATGACCATCTATCATCAACTGAATTATGCTCATGTTATGCCACACCCTaGGATATAACATGCATAGCC | + |
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Preference number: 4 (lower is better) Translates to: MPSETRCHDHLSSTELCSCYATP*DITCIA Trigger: GGCTATGCATGTTATATCTCAGGGTGTGGCATAACA...TGAGCATAATTCAGTTGATGATAGATGGTCATGACACCTGGTTTCTGATGGCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197125.3 |
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| CDS-3UTR TCA 90 bp | GGGCTTGCAAATAGACCTTTATTATCATTGAGGAAGAGGACACACAAACTGCTATGTTATGCCACACCCTaGGATATAACATGCATAGCC | + |
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Preference number: 4 (lower is better) Translates to: GLANRPLLSLRKRTHKLLCYATP*DITCIA Trigger: GGCTATGCATGTTATATCTCAGGGTGTGGCATAACA...TAGCAGTTTGTGTGTCCTCTTCCTCAATGATAATAAAGGTCTATTTGCAAGCCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199430.5 |
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| CDS-3UTR CCA 90 bp | CTTGCAAATAGACCTTTATTATCATTGAGGAAGAGGACACACAAACTGCTAAGTCATGTCTCTTTGTCCTaGAGCTGTAGGGTGACCATG | + |
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Preference number: 4 (lower is better) Translates to: LANRPLLSLRKRTHKLLSHVSLS*SCRVTM Trigger: CATGGTCACCCTACAGCTCCAGGACAAAGAGACATG...ACTTAGCAGTTTGTGTGTCCTCTTCCTCAATGATAATAAAGGTCTATTTGCAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199430.5 |
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| CDS-3UTR TCA 90 bp | CTTGCAAATAGACCTTTATTATCATTGAGGAAGAGGACACACAAACTGCTAAGTAAAAGCCATCTCTTCTaGCACAACTTCCTCCACAGG | + |
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Preference number: 4 (lower is better) Translates to: LANRPLLSLRKRTHKLLSKSHLF*HNFLHR Trigger: CCTGTGGAGGAAGTTGTGTCAGAAGAGATGGCTTTT...ACTTAGCAGTTTGTGTGTCCTCTTCCTCAATGATAATAAAGGTCTATTTGCAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199430.5 |
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| CDS-3UTR TCA 90 bp | AGGACACACAAACTGCTAAGTTTTCAAGAGCAGATATTCAAGGCATATGCCATCTCTCACGATCGTTTCTaGGAAGTACTGAAAGGTCTT | + |
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Preference number: 4 (lower is better) Translates to: RTHKLLSFQEQIFKAYAISHDRF*EVLKGL Trigger: AAGACCTTTCAGTACTTCTCAGAAACGATCGTGAGA...GATGGCATATGCCTTGAATATCTGCTCTTGAAAACTTAGCAGTTTGTGTGTCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211814.2 |
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| CDS-3UTR GCA 90 bp | GGGCTTGCAAATAGACCTTTATTATCATTGAGGAAGAGGACACACAAACTGCTAGTCCCTTTCTTGTTATaGCACACCCTGAGATATAAC | + |
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Preference number: 4 (lower is better) Translates to: GLANRPLLSLRKRTHKLLVPFLL*HTLRYN Trigger: GTTATATCTCAGGGTGTGGCATAACAAGAAAGGGAC...TAGCAGTTTGTGTGTCCTCTTCCTCAATGATAATAAAGGTCTATTTGCAAGCCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199430.5 |
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| CDS-3UTR GCA 90 bp | CATATGCCATCAGAAACCAGGTGTCATGACCATCTATCATCAACTGAATTATGCAATATCTACAGTGACTaGAATGTGCATCTCAGGGAG | + |
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Preference number: 4 (lower is better) Translates to: HMPSETRCHDHLSSTELCNIYSD*NVHLRE Trigger: CTCCCTGAGATGCACATTGCAGTCACTGTAGATATT...GCATAATTCAGTTGATGATAGATGGTCATGACACCTGGTTTCTGATGGCATATG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197125.3 |
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| CDS-3UTR GCA 90 bp | GGGCTTGCAAATAGACCTTTATTATCATTGAGGAAGAGGACACACAAACTGCTAAATATCTACAGTGACTaGAATGTGCATCTCAGGGAG | + |
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Preference number: 4 (lower is better) Translates to: GLANRPLLSLRKRTHKLLNIYSD*NVHLRE Trigger: CTCCCTGAGATGCACATTGCAGTCACTGTAGATATT...TAGCAGTTTGTGTGTCCTCTTCCTCAATGATAATAAAGGTCTATTTGCAAGCCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199430.5 |
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| CDS-3UTR GCA 90 bp | ATGCCATCAGAAACCAGGTGTCATGACCATCTATCATCAACTGAATTATGCTCAATCACTGCTTGCAAGTaGATTCCAGTTCTTGTTCAC | + |
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Preference number: 4 (lower is better) Translates to: MPSETRCHDHLSSTELCSITACK*IPVLVH Trigger: GTGAACAAGAACTGGAATGCACTTGCAAGCAGTGAT...TGAGCATAATTCAGTTGATGATAGATGGTCATGACACCTGGTTTCTGATGGCAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197125.3 |
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| CDS-3UTR TCA 90 bp | CCTTTATTATCATTGAGGAAGAGGACACACAAACTGCTAAGTTTTCAAGAGCAGGAATTTCCTTGTAAGTaGAATCTCGTGGATTTGCCC | + |
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Preference number: 4 (lower is better) Translates to: PLLSLRKRTHKLLSFQEQEFPCK*NLVDLP Trigger: GGGCAAATCCACGAGATTTCACTTACAAGGAAATTC...CTGCTCTTGAAAACTTAGCAGTTTGTGTGTCCTCTTCCTCAATGATAATAAAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197125.3 |
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| CDS-3UTR TCA 90 bp | CATCAGAAACCAGGTGTCATGACCATCTATCATCAACTGAATTATGCTCACATCATTGAATATCTACAGTaGCTGCAATGTGCATCTCAG | + |
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Preference number: 4 (lower is better) Translates to: HQKPGVMTIYHQLNYAHIIEYLQ*LQCASQ Trigger: CTGAGATGCACATTGCAGTCACTGTAGATATTCAAT...GATGTGAGCATAATTCAGTTGATGATAGATGGTCATGACACCTGGTTTCTGATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197125.3 |
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| CDS-3UTR TCA 90 bp | GGGCTTGCAAATAGACCTTTATTATCATTGAGGAAGAGGACACACAAACTGCTAATTGAATATCTACAGTaGCTGCAATGTGCATCTCAG | + |
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Preference number: 4 (lower is better) Translates to: GLANRPLLSLRKRTHKLLIEYLQ*LQCASQ Trigger: CTGAGATGCACATTGCAGTCACTGTAGATATTCAAT...TAGCAGTTTGTGTGTCCTCTTCCTCAATGATAATAAAGGTCTATTTGCAAGCCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199430.5 |
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| CDS-3UTR TCA 90 bp | TTTTCAAGAGCAGATATTCAAGGCATATGCCATCAGAAACCAGGTGTCATGACCCCACAGTTTGATAGTTaGTTGAATATCTACAGTGAC | + |
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Preference number: 4 (lower is better) Translates to: FSRADIQGICHQKPGVMTPQFDS*LNIYSD Trigger: GTCACTGTAGATATTCAATCAACTATCAAACTGTGG...GGTCATGACACCTGGTTTCTGATGGCATATGCCTTGAATATCTGCTCTTGAAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000197125.3 |
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| CDS-3UTR GCA 90 bp | TCAGAAACCAGGTGTCATGACCATCTATCATCAACTGAATTATGCTCACATCATGTCCCTTTCTTGTTATaGCACACCCTGAGATATAAC | + |
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Preference number: 4 (lower is better) Translates to: SETRCHDHLSSTELCSHHVPFLL*HTLRYN Trigger: GTTATATCTCAGGGTGTGGCATAACAAGAAAGGGAC...ATGATGTGAGCATAATTCAGTTGATGATAGATGGTCATGACACCTGGTTTCTGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197125.3 |
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| CDS-3UTR GCA 90 bp | AGGAAGAGGACACACAAACTGCTAAGTTTTCAAGAGCAGATATTCAAGGCATATCAGCTTTCAGTGATTTaGATGGAGATTCCAGGATGT | + |
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Preference number: 4 (lower is better) Translates to: RKRTHKLLSFQEQIFKAYQLSVI*MEIPGC Trigger: ACATCCTGGAATCTCCATGCAAATCACTGAAAGCTG...ATATGCCTTGAATATCTGCTCTTGAAAACTTAGCAGTTTGTGTGTCCTCTTCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197125.3 |
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| CDS-3UTR TCA 90 bp | GGGCTTGCAAATAGACCTTTATTATCATTGAGGAAGAGGACACACAAACTGCTACCATCTATCATCAACTaGATTATGCTCACATCATCA | + |
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Preference number: 4 (lower is better) Translates to: GLANRPLLSLRKRTHKLLPSIIN*IMLTSS Trigger: TGATGATGTGAGCATAATTCAGTTGATGATAGATGG...TAGCAGTTTGTGTGTCCTCTTCCTCAATGATAATAAAGGTCTATTTGCAAGCCC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199430.5 |
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| CDS-3UTR GCA 90 bp | GGGCTTGCAAATAGACCTTTATTATCATTGAGGAAGAGGACACACAAACTGCTATCATCAACTGAATTATaGTCACATCATCACATAGCG | + |
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Preference number: 4 (lower is better) Translates to: GLANRPLLSLRKRTHKLLSSTEL*SHHHIA Trigger: CGCTATGTGATGATGTGAGCATAATTCAGTTGATGA...TAGCAGTTTGTGTGTCCTCTTCCTCAATGATAATAAAGGTCTATTTGCAAGCCC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199430.5 |
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| CDS-3UTR GCA 90 bp | CTTGCAAATAGACCTTTATTATCATTGAGGAAGAGGACACACAAACTGCTAAGTGATATTCAAGGCATATaGCATCAGAAACCAGGTGTC | + |
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Preference number: 4 (lower is better) Translates to: LANRPLLSLRKRTHKLLSDIQGI*HQKPGV Trigger: GACACCTGGTTTCTGATGGCATATGCCTTGAATATC...ACTTAGCAGTTTGTGTGTCCTCTTCCTCAATGATAATAAAGGTCTATTTGCAAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199430.5 |
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| CDS-3UTR CCA 90 bp | GGGCTTGCAAATAGACCTTTATTATCATTGAGGAAGAGGACACACAAACTGCTATGGAAATCGTGTTCTTaGAATTCACCATACAGACAA | + |
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Preference number: 4 (lower is better) Translates to: GLANRPLLSLRKRTHKLLWKSCS*NSPYRQ Trigger: TTGTCTGTATGGTGAATTCCAAGAACACGATTTCCA...TAGCAGTTTGTGTGTCCTCTTCCTCAATGATAATAAAGGTCTATTTGCAAGCCC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199430.5 |
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| CDS-3UTR CCA 90 bp | CAAACTGCTAAGTTTTCAAGAGCAGATATTCAAGGCATATGCCATCAGAAACCATGGAAATCGTGTTCTTaGAATTCACCATACAGACAA | + |
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Preference number: 4 (lower is better) Translates to: QTAKFSRADIQGICHQKPWKSCS*NSPYRQ Trigger: TTGTCTGTATGGTGAATTCCAAGAACACGATTTCCA...TGGTTTCTGATGGCATATGCCTTGAATATCTGCTCTTGAAAACTTAGCAGTTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197125.3 |
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| CDS-3UTR TCA 90 bp | CTTGCAAATAGACCTTTATTATCATTGAGGAAGAGGACACACAAACTGCTAAGTCCACAGTTTGATAGTTaGTTGAATATCTACAGTGAC | + |
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Preference number: 4 (lower is better) Translates to: LANRPLLSLRKRTHKLLSPQFDS*LNIYSD Trigger: GTCACTGTAGATATTCAATCAACTATCAAACTGTGG...ACTTAGCAGTTTGTGTGTCCTCTTCCTCAATGATAATAAAGGTCTATTTGCAAG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199430.5 |
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| CDS GCA 90 bp | GACTGCAATGTGCATCTCAGGGAGGGTAGTCAACAGCTTGATACTTaGCGGCTGTTCTGGGCTTACCCAGGTTATAACGCTCTTGTGAAC | + |
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Preference number: 5 (lower is better) Translates to: DCNVHLREGSQQLDT*RLFWAYPGYNALVN Trigger: GTTCACAAGAGCGTTATAACCTGGGTAAGCCCAGAACAGCCGGCAAGTATCAAGCTGTTGACTACCCTCCCTGAGATGCACATTGCAGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000197125.3 ENSMUST00000199430.5 ENSMUST00000212725.2 |
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| CDS TCA 90 bp | ATCAGGGTTAGCCTGTCTTCCCTTCTTGGGGTCCAGAAGGCTTCTTaGCATAAGGAAATTTCCAGAAGGGTAGACACAGGGGCAGAGAAT | + |
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Preference number: 5 (lower is better) Translates to: IRVSLSSLLGVQKAS*HKEISRRVDTGAEN Trigger: ATTCTCTGCCCCTGTGTCTACCCTTCTGGAAATTTCCTTATGTCAAGAAGCCTTCTGGACCCCAAGAAGGGAAGACAGGCTAACCCTGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212725.2 |
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| CDS TCA 90 bp | GACGATGACATGAACGGGGTCCACAGAGAGTCTCACGATCGTTTCTaGGAAGTACTGAAAGGTCTGCAGACGGTGACCATTATTGGTAAA | + |
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Preference number: 5 (lower is better) Translates to: DDDMNGVHRESHDRF*EVLKGLQTVTIIGK Trigger: TTTACCAATAATGGTCACCGTCTGCAGACCTTTCAGTACTTCTCAGAAACGATCGTGAGACTCTCTGTGGACCCCGTTCATGTCATCGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212725.2 |
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| CDS TCA 90 bp | ATGCATAGCCACAAGGTCCATATTGCAAAGGAATTTCCTTGTAAGTaGAATCTCGTGGATTTGCCCGGGTCTTGGAGTGTTCTTGCCACG | + |
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Preference number: 5 (lower is better) Translates to: MHSHKVHIAKEFPCK*NLVDLPGSWSVLAT Trigger: CGTGGCAAGAACACTCCAAGACCCGGGCAAATCCACGAGATTTCACTTACAAGGAAATTCCTTTGCAATATGGACCTTGTGGCTATGCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000197125.3 ENSMUST00000199430.5 ENSMUST00000212725.2 |
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| CDS CCA 90 bp | ACAAGGTCCATATTGCAAAGGAATTTCCTTGTAAGTGAAATCTCGTaGATTTGCCCGGGTCTTGGAGTGTTCTTGCCACGTTCGGTAAAC | + |
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Preference number: 5 (lower is better) Translates to: TRSILQRNFLVSEIS*ICPGLGVFLPRSVN Trigger: GTTTACCGAACGTGGCAAGAACACTCCAAGACCCGGGCAAATCCACGAGATTTCACTTACAAGGAAATTCCTTTGCAATATGGACCTTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000197125.3 ENSMUST00000199430.5 ENSMUST00000212725.2 |
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| CDS GCA 90 bp | TCCATATTGCAAAGGAATTTCCTTGTAAGTGAAATCTCGTGGATTTaGCCGGGTCTTGGAGTGTTCTTGCCACGTTCGGTAAACGAAGAA | + |
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Preference number: 5 (lower is better) Translates to: SILQRNFLVSEISWI*PGLGVFLPRSVNEE Trigger: TTCTTCGTTTACCGAACGTGGCAAGAACACTCCAAGACCCGGGCAAATCCACGAGATTTCACTTACAAGGAAATTCCTTTGCAATATGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000197125.3 ENSMUST00000199430.5 ENSMUST00000212725.2 |
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| CDS-3UTR CAA 90 bp | AAGAGGACACACAAACTGCTAAGTTTTCAAGAGCAGATATTCAAGGCATATGCCGGTCTTGGAGTGTTCTaGCCACGTTCGGTAAACGAA | + |
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Preference number: 5 (lower is better) Translates to: KRTHKLLSFQEQIFKAYAGLGVF*PRSVNE Trigger: TTCGTTTACCGAACGTGGCAAGAACACTCCAAGACC...GGCATATGCCTTGAATATCTGCTCTTGAAAACTTAGCAGTTTGTGTGTCCTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197125.3 |
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| CDS-3UTR CAA 90 bp | TCAAGGCATATGCCATCAGAAACCAGGTGTCATGACCATCTATCATCAACTGAATGTCTTGTCCCTTTCTaGTTATGCCACACCCTGAGA | + |
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Preference number: 5 (lower is better) Translates to: SRHMPSETRCHDHLSSTECLVPF*LCHTLR Trigger: TCTCAGGGTGTGGCATAACAAGAAAGGGACAAGACA...TTCAGTTGATGATAGATGGTCATGACACCTGGTTTCTGATGGCATATGCCTTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197125.3 |
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| CDS-3UTR CAA 90 bp | ACACACAAACTGCTAAGTTTTCAAGAGCAGATATTCAAGGCATATGCCATCAGAAGGGTAGTCAACAGCTaGATACTTGCCGGCTGTTCT | + |
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Preference number: 5 (lower is better) Translates to: THKLLSFQEQIFKAYAIRRVVNS*ILAGCS Trigger: AGAACAGCCGGCAAGTATCAAGCTGTTGACTACCCT...TCTGATGGCATATGCCTTGAATATCTGCTCTTGAAAACTTAGCAGTTTGTGTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197125.3 |
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| CDS TCA 90 bp | ACAGACAACAGACTTGTCTTGTCCCTTTCTTGTTATGCCACACCCTaGGATATAACATGCATAGCCACAAGGTCCATATTGCAAAGGAAT | + |
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Preference number: 5 (lower is better) Translates to: TDNRLVLSLSCYATP*DITCIATRSILQRN Trigger: ATTCCTTTGCAATATGGACCTTGTGGCTATGCATGTTATATCTCAGGGTGTGGCATAACAAGAAAGGGACAAGACAAGTCTGTTGTCTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000197125.3 ENSMUST00000199430.5 ENSMUST00000212725.2 |
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| CDS TCA 90 bp | CAGACGGTGACCATTATTGGTAAAGAGCAAGAGAGAGAATTCAGTTaGACAAACAATCGTGTCCTTATCACTGACTCCAAACCAGTTCAG | + |
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Preference number: 5 (lower is better) Translates to: QTVTIIGKEQEREFS*TNNRVLITDSKPVQ Trigger: CTGAACTGGTTTGGAGTCAGTGATAAGGACACGATTGTTTGTTCAACTGAATTCTCTCTCTTGCTCTTTACCAATAATGGTCACCGTCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212725.2 |
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| CDS-3UTR CAA 90 bp | ACCAGGTGTCATGACCATCTATCATCAACTGAATTATGCTCACATCATCACATAACAGGACATCACTGCTaGCAAGTGCATTCCAGTTCT | + |
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Preference number: 5 (lower is better) Translates to: TRCHDHLSSTELCSHHHITGHHC*QVHSSS Trigger: AGAACTGGAATGCACTTGCAAGCAGTGATGTCCTGT...TATGTGATGATGTGAGCATAATTCAGTTGATGATAGATGGTCATGACACCTGGT 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197125.3 |
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| CDS-3UTR CAA 90 bp | CTTGCAAATAGACCTTTATTATCATTGAGGAAGAGGACACACAAACTGCTAAGTGGTCTTGGAGTGTTCTaGCCACGTTCGGTAAACGAA | + |
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Preference number: 5 (lower is better) Translates to: LANRPLLSLRKRTHKLLSGLGVF*PRSVNE Trigger: TTCGTTTACCGAACGTGGCAAGAACACTCCAAGACC...ACTTAGCAGTTTGTGTGTCCTCTTCCTCAATGATAATAAAGGTCTATTTGCAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199430.5 |
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| CDS-3UTR CAA 90 bp | GGGCTTGCAAATAGACCTTTATTATCATTGAGGAAGAGGACACACAAACTGCTAGACAACAGACTTGTCTaGTCCCTTTCTTGTTATGCC | + |
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Preference number: 5 (lower is better) Translates to: GLANRPLLSLRKRTHKLLDNRLV*SLSCYA Trigger: GGCATAACAAGAAAGGGACAAGACAAGTCTGTTGTC...TAGCAGTTTGTGTGTCCTCTTCCTCAATGATAATAAAGGTCTATTTGCAAGCCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199430.5 |
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| CDS-3UTR CAA 90 bp | CTTGCAAATAGACCTTTATTATCATTGAGGAAGAGGACACACAAACTGCTAAGTAGGGTAGTCAACAGCTaGATACTTGCCGGCTGTTCT | + |
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Preference number: 5 (lower is better) Translates to: LANRPLLSLRKRTHKLLSRVVNS*ILAGCS Trigger: AGAACAGCCGGCAAGTATCAAGCTGTTGACTACCCT...ACTTAGCAGTTTGTGTGTCCTCTTCCTCAATGATAATAAAGGTCTATTTGCAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199430.5 |
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| CDS-3UTR CAA 90 bp | AAGTTTTCAAGAGCAGATATTCAAGGCATATGCCATCAGAAACCAGGTGTCATGACAGCTTTCAGTGATTaGCATGGAGATTCCAGGATG | + |
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Preference number: 5 (lower is better) Translates to: KFSRADIQGICHQKPGVMTAFSD*HGDSRM Trigger: CATCCTGGAATCTCCATGCAAATCACTGAAAGCTGT...CATGACACCTGGTTTCTGATGGCATATGCCTTGAATATCTGCTCTTGAAAACTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197125.3 |
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| CDS-3UTR CAA 90 bp | GGGCTTGCAAATAGACCTTTATTATCATTGAGGAAGAGGACACACAAACTGCTAACAGCTTTCAGTGATTaGCATGGAGATTCCAGGATG | + |
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Preference number: 5 (lower is better) Translates to: GLANRPLLSLRKRTHKLLTAFSD*HGDSRM Trigger: CATCCTGGAATCTCCATGCAAATCACTGAAAGCTGT...TAGCAGTTTGTGTGTCCTCTTCCTCAATGATAATAAAGGTCTATTTGCAAGCCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199430.5 |
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| CDS TCA 90 bp | TGTTCCCAAACTCTTCCAGCTTCATATCATATGTTTCAAACTTTGTaGTTTTGGAGCAACCACTTCTGGACATCAGGGTTAGCCTGTCTT | + |
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Preference number: 5 (lower is better) Translates to: CSQTLPASYHMFQTL*FWSNHFWTSGLACL Trigger: AAGACAGGCTAACCCTGATGTCCAGAAGTGGTTGCTCCAAAATCACAAAGTTTGAAACATATGATATGAAGCTGGAAGAGTTTGGGAACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212725.2 |
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| CDS TCA 90 bp | GCAAGAGAGAGAATTCAGTTGAACAAACAATCGTGTCCTTATCACTaGCTCCAAACCAGTTCAGGCTTTCCGTGTAATATGGCAACAAAA | + |
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Preference number: 5 (lower is better) Translates to: ARERIQLNKQSCPYH*LQTSSGFPCNMATK Trigger: TTTTGTTGCCATATTACACGGAAAGCCTGAACTGGTTTGGAGTCAGTGATAAGGACACGATTGTTTGTTCAACTGAATTCTCTCTCTTGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212725.2 |
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| CDS GCA 90 bp | AATTCACCATACAGACAACAGACTTGTCTTGTCCCTTTCTTGTTATaGCACACCCTGAGATATAACATGCATAGCCACAAGGTCCATATT | + |
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Preference number: 5 (lower is better) Translates to: NSPYRQQTCLVPFLL*HTLRYNMHSHKVHI Trigger: AATATGGACCTTGTGGCTATGCATGTTATATCTCAGGGTGTGGCATAACAAGAAAGGGACAAGACAAGTCTGTTGTCTGTATGGTGAATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000197125.3 ENSMUST00000199430.5 ENSMUST00000212725.2 |
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| CDS-3UTR CAA 90 bp | CTTGCAAATAGACCTTTATTATCATTGAGGAAGAGGACACACAAACTGCTAAGTACAGGACATCACTGCTaGCAAGTGCATTCCAGTTCT | + |
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Preference number: 5 (lower is better) Translates to: LANRPLLSLRKRTHKLLSTGHHC*QVHSSS Trigger: AGAACTGGAATGCACTTGCAAGCAGTGATGTCCTGT...ACTTAGCAGTTTGTGTGTCCTCTTCCTCAATGATAATAAAGGTCTATTTGCAAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199430.5 |
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| CDS-3UTR CAA 90 bp | CATATGCCATCAGAAACCAGGTGTCATGACCATCTATCATCAACTGAATTATGCGCCACAAGGTCCATATaGCAAAGGAATTTCCTTGTA | + |
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Preference number: 5 (lower is better) Translates to: HMPSETRCHDHLSSTELCATRSI*QRNFLV Trigger: TACAAGGAAATTCCTTTGCAATATGGACCTTGTGGC...GCATAATTCAGTTGATGATAGATGGTCATGACACCTGGTTTCTGATGGCATATG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197125.3 |
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| CDS-3UTR CAA 90 bp | CTTGCAAATAGACCTTTATTATCATTGAGGAAGAGGACACACAAACTGCTAAGTTGTCTTGTCCCTTTCTaGTTATGCCACACCCTGAGA | + |
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Preference number: 5 (lower is better) Translates to: LANRPLLSLRKRTHKLLSCLVPF*LCHTLR Trigger: TCTCAGGGTGTGGCATAACAAGAAAGGGACAAGACA...ACTTAGCAGTTTGTGTGTCCTCTTCCTCAATGATAATAAAGGTCTATTTGCAAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199430.5 |
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| CDS-3UTR CAA 90 bp | CAAACTGCTAAGTTTTCAAGAGCAGATATTCAAGGCATATGCCATCAGAAACCAGACAACAGACTTGTCTaGTCCCTTTCTTGTTATGCC | + |
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Preference number: 5 (lower is better) Translates to: QTAKFSRADIQGICHQKPDNRLV*SLSCYA Trigger: GGCATAACAAGAAAGGGACAAGACAAGTCTGTTGTC...TGGTTTCTGATGGCATATGCCTTGAATATCTGCTCTTGAAAACTTAGCAGTTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197125.3 |
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| CDS-3UTR CAA 90 bp | GGGCTTGCAAATAGACCTTTATTATCATTGAGGAAGAGGACACACAAACTGCTATCATCACATAGCGTTTaGTTAATGAAGCCTCTCGGT | + |
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Preference number: 5 (lower is better) Translates to: GLANRPLLSLRKRTHKLLSSHSV*LMKPLG Trigger: ACCGAGAGGCTTCATTAACAAAACGCTATGTGATGA...TAGCAGTTTGTGTGTCCTCTTCCTCAATGATAATAAAGGTCTATTTGCAAGCCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199430.5 |
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| CDS CCA 90 bp | GTCCTTATCACTGACTCCAAACCAGTTCAGGCTTTCCGTGTAATATaGCAACAAAAAGCCTGCTATCGAATTTCCTTTAACAATAATTTT | + |
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Preference number: 5 (lower is better) Translates to: VLITDSKPVQAFRVI*QQKACYRISFNNNF Trigger: AAAATTATTGTTAAAGGAAATTCGATAGCAGGCTTTTTGTTGCCATATTACACGGAAAGCCTGAACTGGTTTGGAGTCAGTGATAAGGAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000212725.2 |
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| CDS CAA 72 bp | ACTGCAATGTGCATCTCAGGGAGGGTAGTCAACAGCTaGATACTTGCCGGCTGTTCTGGGCTTACCCAGGTT | + |
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Preference number: 6 (lower is better) Translates to: TAMCISGRVVNS*ILAGCSGLTQV Trigger: AACCTGGGTAAGCCCAGAACAGCCGGCAAGTATCAAGCTGTTGACTACCCTCCCTGAGATGCACATTGCAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000197125.3 ENSMUST00000199430.5 ENSMUST00000212725.2 |
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| CDS CAA 90 bp | TGGAGCAACCACTTCTGGACATCAGGGTTAGCCTGTCTTCCCTTCTaGGGGTCCAGAAGGCTTCTTGACATAAGGAAATTTCCAGAAGGG | + |
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Preference number: 6 (lower is better) Translates to: WSNHFWTSGLACLPF*GSRRLLDIRKFPEG Trigger: CCCTTCTGGAAATTTCCTTATGTCAAGAAGCCTTCTGGACCCCAAGAAGGGAAGACAGGCTAACCCTGATGTCCAGAAGTGGTTGCTCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212725.2 |
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| CDS TCA 72 bp | AGCCTGTCTTCCCTTCTTGGGGTCCAGAAGGCTTCTTaGCATAAGGAAATTTCCAGAAGGGTAGACACAGGG | + |
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Preference number: 6 (lower is better) Translates to: SLSSLLGVQKAS*HKEISRRVDTG Trigger: CCCTGTGTCTACCCTTCTGGAAATTTCCTTATGTCAAGAAGCCTTCTGGACCCCAAGAAGGGAAGACAGGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212725.2 |
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| CDS TCA 72 bp | ATGAACGGGGTCCACAGAGAGTCTCACGATCGTTTCTaGGAAGTACTGAAAGGTCTGCAGACGGTGACCATT | + |
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Preference number: 6 (lower is better) Translates to: MNGVHRESHDRF*EVLKGLQTVTI Trigger: AATGGTCACCGTCTGCAGACCTTTCAGTACTTCTCAGAAACGATCGTGAGACTCTCTGTGGACCCCGTTCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212725.2 |
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| CDS CAA 72 bp | GAAATCTCGTGGATTTGCCCGGGTCTTGGAGTGTTCTaGCCACGTTCGGTAAACGAAGAACTGCTTCCATGT | + |
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Preference number: 6 (lower is better) Translates to: EISWICPGLGVF*PRSVNEELLPC Trigger: ACATGGAAGCAGTTCTTCGTTTACCGAACGTGGCAAGAACACTCCAAGACCCGGGCAAATCCACGAGATTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000197125.3 ENSMUST00000199430.5 ENSMUST00000212725.2 |
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| CDS TCA 72 bp | ACTGCTTCCATGTCTCTTTGTCCTGGAGCTGTAGGGTaGCCATGTCACAGAAAAGCCATCTCTTCTGACACA | + |
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Preference number: 6 (lower is better) Translates to: TASMSLCPGAVG*PCHRKAISSDT Trigger: TGTGTCAGAAGAGATGGCTTTTCTGTGACATGGTCACCCTACAGCTCCAGGACAAAGAGACATGGAAGCAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000197125.3 ENSMUST00000199430.5 ENSMUST00000212725.2 |
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| CDS CAA 90 bp | CTTGTAAGTGAAATCTCGTGGATTTGCCCGGGTCTTGGAGTGTTCTaGCCACGTTCGGTAAACGAAGAACTGCTTCCATGTCTCTTTGTC | + |
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Preference number: 6 (lower is better) Translates to: LVSEISWICPGLGVF*PRSVNEELLPCLFV Trigger: GACAAAGAGACATGGAAGCAGTTCTTCGTTTACCGAACGTGGCAAGAACACTCCAAGACCCGGGCAAATCCACGAGATTTCACTTACAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000197125.3 ENSMUST00000199430.5 ENSMUST00000212725.2 |
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| CDS TCA 72 bp | GACAATCGGGTCATCCTTGGTAATGACAGCTTTCAGTaGTTTGCATGGAGATTCCAGGATGTTAGTCGCCAG | + |
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Preference number: 6 (lower is better) Translates to: DNRVILGNDSFQ*FAWRFQDVSRQ Trigger: CTGGCGACTAACATCCTGGAATCTCCATGCAAATCACTGAAAGCTGTCATTACCAAGGATGACCCGATTGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000197125.3 ENSMUST00000199430.5 ENSMUST00000212725.2 |
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| CDS GCA 72 bp | ATCTCTTCTGACACAACTTCCTCCACAGGACATCACTaGTTGCAAGTGCATTCCAGTTCTTGTTCACTTGGG | + |
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Preference number: 6 (lower is better) Translates to: ISSDTTSSTGHH*LQVHSSSCSLG Trigger: CCCAAGTGAACAAGAACTGGAATGCACTTGCAAGCAGTGATGTCCTGTGGAGGAAGTTGTGTCAGAAGAGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000197125.3 ENSMUST00000212725.2 |
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| CDS CAA 72 bp | CACTTCTGGACATCAGGGTTAGCCTGTCTTCCCTTCTaGGGGTCCAGAAGGCTTCTTGACATAAGGAAATTT | + |
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Preference number: 6 (lower is better) Translates to: HFWTSGLACLPF*GSRRLLDIRKF Trigger: AAATTTCCTTATGTCAAGAAGCCTTCTGGACCCCAAGAAGGGAAGACAGGCTAACCCTGATGTCCAGAAGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212725.2 |
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| CDS TCA 72 bp | CACAAGGTCCATATTGCAAAGGAATTTCCTTGTAAGTaGAATCTCGTGGATTTGCCCGGGTCTTGGAGTGTT | + |
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Preference number: 6 (lower is better) Translates to: HKVHIAKEFPCK*NLVDLPGSWSV Trigger: AACACTCCAAGACCCGGGCAAATCCACGAGATTTCACTTACAAGGAAATTCCTTTGCAATATGGACCTTGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000197125.3 ENSMUST00000199430.5 ENSMUST00000212725.2 |
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| CDS CAA 72 bp | ATCGTGTTCTTGGAATTCACCATACAGACAACAGACTaGTCTTGTCCCTTTCTTGTTATGCCACACCCTGAG | + |
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Preference number: 6 (lower is better) Translates to: IVFLEFTIQTTD*SCPFLVMPHPE Trigger: CTCAGGGTGTGGCATAACAAGAAAGGGACAAGACAAGTCTGTTGTCTGTATGGTGAATTCCAAGAACACGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000197125.3 ENSMUST00000199430.5 ENSMUST00000212725.2 |
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| CDS CAA 72 bp | CCCAAGATATCGCTTACCAAGACAATCGGGTCATCCTaGGTAATGACAGCTTTCAGTGATTTGCATGGAGAT | + |
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Preference number: 6 (lower is better) Translates to: PKISLTKTIGSS*VMTAFSDLHGD Trigger: ATCTCCATGCAAATCACTGAAAGCTGTCATTACCAAGGATGACCCGATTGTCTTGGTAAGCGATATCTTGGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212725.2 |
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| CDS CAA 90 bp | TCTTGGAATTCACCATACAGACAACAGACTTGTCTTGTCCCTTTCTaGTTATGCCACACCCTGAGATATAACATGCATAGCCACAAGGTC | + |
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Preference number: 6 (lower is better) Translates to: SWNSPYRQQTCLVPF*LCHTLRYNMHSHKV Trigger: GACCTTGTGGCTATGCATGTTATATCTCAGGGTGTGGCATAACAAGAAAGGGACAAGACAAGTCTGTTGTCTGTATGGTGAATTCCAAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000197125.3 ENSMUST00000199430.5 ENSMUST00000212725.2 |
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| CDS TCA 72 bp | AGACTTGTCTTGTCCCTTTCTTGTTATGCCACACCCTaGGATATAACATGCATAGCCACAAGGTCCATATTG | + |
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Preference number: 6 (lower is better) Translates to: RLVLSLSCYATP*DITCIATRSIL Trigger: CAATATGGACCTTGTGGCTATGCATGTTATATCTCAGGGTGTGGCATAACAAGAAAGGGACAAGACAAGTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000197125.3 ENSMUST00000199430.5 ENSMUST00000212725.2 |
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| CDS GCA 72 bp | TACAGACAACAGACTTGTCTTGTCCCTTTCTTGTTATaGCACACCCTGAGATATAACATGCATAGCCACAAG | + |
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Preference number: 6 (lower is better) Translates to: YRQQTCLVPFLL*HTLRYNMHSHK Trigger: CTTGTGGCTATGCATGTTATATCTCAGGGTGTGGCATAACAAGAAAGGGACAAGACAAGTCTGTTGTCTGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000197125.3 ENSMUST00000199430.5 ENSMUST00000212725.2 |
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| CDS CCA 72 bp | ACTGACTCCAAACCAGTTCAGGCTTTCCGTGTAATATaGCAACAAAAAGCCTGCTATCGAATTTCCTTTAAC | + |
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Preference number: 6 (lower is better) Translates to: TDSKPVQAFRVI*QQKACYRISFN Trigger: GTTAAAGGAAATTCGATAGCAGGCTTTTTGTTGCCATATTACACGGAAAGCCTGAACTGGTTTGGAGTCAGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000212725.2 |
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| CDS CAA 72 bp | CTGATGTCCTCAGTAGGCTGCTCATGTAAAACACCTTaGGCAAAATATATGGCTGTTTCTTACTCAGTAAGA | + |
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Preference number: 6 (lower is better) Translates to: LMSSVGCSCKTP*AKYMAVSYSVR Trigger: TCTTACTGAGTAAGAAACAGCCATATATTTTGCCAAAGGTGTTTTACATGAGCAGCCTACTGAGGACATCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212725.2 |
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| CDS TCA 72 bp | TCCACAGAGAGTCTCACGATCGTTTCTGAGAAGTACTaGAAGGTCTTTAACAATAATTTTGTTCCCAAACTC | + |
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Preference number: 6 (lower is better) Translates to: STESLTIVSEKY*KVFNNNFVPKL Trigger: GAGTTTGGGAACAAAATTATTGTTAAAGACCTTTCAGTACTTCTCAGAAACGATCGTGAGACTCTCTGTGGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211814.2 |
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| CDS TCA 72 bp | ACTCTTCCAGCTTCATATCATATGTTTCAAACTTTGTaGTTTTGGAGCAACCACTTCTGGACATCAGGGTTA | + |
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Preference number: 6 (lower is better) Translates to: TLPASYHMFQTL*FWSNHFWTSGL Trigger: TAACCCTGATGTCCAGAAGTGGTTGCTCCAAAATCACAAAGTTTGAAACATATGATATGAAGCTGGAAGAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212725.2 |
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| CDS GCA 72 bp | GTTCAGGCTTTCCGTGTAATATGGCAACAAAAAGCCTaGTATCGAATTTCCTTTAACAATAATTTTGTTCCC | + |
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Preference number: 6 (lower is better) Translates to: VQAFRVIWQQKA*YRISFNNNFVP Trigger: GGGAACAAAATTATTGTTAAAGGAAATTCGATAGCAGGCTTTTTGTTGCCATATTACACGGAAAGCCTGAAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000212725.2 |
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