Pregenerated sensors for FBXW26 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000059547Ensembl transcript IDs: ENSMUST00000071917.4
Found 62 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | AAGGGAAGACCACAATGCCATACTGTCCACATGGCCTGGTCATCTGAGCCAACCATTTGGCCACTTCAATaGTTAGCAACACTGAAATCA | + |
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Preference number: 2 (lower is better) Translates to: KGRPQCHTVHMAWSSEPTIWPLQ*LATLKS Trigger: TGATTTCAGTGTTGCTAATCATTGAAGTGGCCAAAT...GGTTGGCTCAGATGACCAGGCCATGTGGACAGTATGGCATTGTGGTCTTCCCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071917.4 |
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| 3UTR-3UTR TCA 90 bp | GCTCCAAGTTTAATTCTGAAGCTCCACCTTATAAAGGGAAGACCACAATGCCATTCTTCCATCTGCCTCTaGCTCCCTCTGTCAGGATTA | + |
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Preference number: 2 (lower is better) Translates to: APSLILKLHLIKGRPQCHSSICL*LPLSGL Trigger: TAATCCTGACAGAGGGAGTCAGAGGCAGATGGAAGA...ATGGCATTGTGGTCTTCCCTTTATAAGGTGGAGCTTCAGAATTAAACTTGGAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071917.4 |
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| 3UTR-3UTR TCA 90 bp | GCCATACTGTCCACATGGCCTGGTCATCTGAGCCAACCCTATAGCAATGAAATGAGAGATAGGTTCTCTTaGAGTAAACTGGTTAGCATG | + |
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Preference number: 2 (lower is better) Translates to: AILSTWPGHLSQPYSNEMRDRFS*SKLVSM Trigger: CATGCTAACCAGTTTACTTCAAGAGAACCTATCTCT...CATTTCATTGCTATAGGGTTGGCTCAGATGACCAGGCCATGTGGACAGTATGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071917.4 |
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| 3UTR TCA 72 bp | AGGCTGGTCTCAGAACTCAGATCTTCCATCTGCCTCTaGCTCCCTCTGTCAGGATTAAAGGTGTGCACCACC | + |
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Preference number: 3 (lower is better) Translates to: RLVSELRSSICL*LPLSGLKVCTT Trigger: GGTGGTGCACACCTTTAATCCTGACAGAGGGAGTCAGAGGCAGATGGAAGATCTGAGTTCTGAGACCAGCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071917.4 |
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| 3UTR GCA 72 bp | ATTCTGAAGCTCCACCTTATAAAGGGAAGACCACAATaGCATACTGTCCACATGGCCTGGTCATCTGAGCCA | + |
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Preference number: 3 (lower is better) Translates to: ILKLHLIKGRPQ*HTVHMAWSSEP Trigger: TGGCTCAGATGACCAGGCCATGTGGACAGTATGGCATTGTGGTCTTCCCTTTATAAGGTGGAGCTTCAGAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071917.4 |
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| 3UTR-3UTR CAA 90 bp | GCCATACTGTCCACATGGCCTGGTCATCTGAGCCAACCCTATAGCAATGAAATGTGTGCACCACCAAATTaGGCCACTTCAATGATTAGC | + |
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Preference number: 3 (lower is better) Translates to: AILSTWPGHLSQPYSNEMCAPPN*ATSMIS Trigger: GCTAATCATTGAAGTGGCCAAATTTGGTGGTGCACA...CATTTCATTGCTATAGGGTTGGCTCAGATGACCAGGCCATGTGGACAGTATGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071917.4 |
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| 3UTR TCA 72 bp | ATTAAAGGTGTGCACCACCAAATTTGGCCACTTCAATaGTTAGCAACACTGAAATCACCAGCCTTTGCTTGC | + |
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Preference number: 3 (lower is better) Translates to: IKGVHHQIWPLQ*LATLKSPAFAC Trigger: GCAAGCAAAGGCTGGTGATTTCAGTGTTGCTAATCATTGAAGTGGCCAAATTTGGTGGTGCACACCTTTAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071917.4 |
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| CDS-3UTR TCA 90 bp | GCTCCACCTTATAAAGGGAAGACCACAATGCCATACTGTCCACATGGCCTGGTCATTTCTGGGCAGTACTaGAATGACTGCAGACAGAGA | + |
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Preference number: 4 (lower is better) Translates to: APPYKGKTTMPYCPHGLVISGQY*NDCRQR Trigger: TCTCTGTCTGCAGTCATTTCAGTACTGCCCAGAAAT...GACCAGGCCATGTGGACAGTATGGCATTGTGGTCTTCCCTTTATAAGGTGGAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071917.4 |
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| CDS-3UTR TCA 90 bp | AGCTCTGTAGATCAGGCTGGTCTCAGAACTCAGATCTTCCATCTGCCTCTGACTCAGGTGATGATGACATaGACAGGATCCACACAGAGT | + |
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Preference number: 4 (lower is better) Translates to: SSVDQAGLRTQIFHLPLTQVMMT*TGSTQS Trigger: ACTCTGTGTGGATCCTGTTCATGTCATCATCACCTG...AGTCAGAGGCAGATGGAAGATCTGAGTTCTGAGACCAGCCTGATCTACAGAGCT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071917.4 |
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| CDS-3UTR TCA 90 bp | GCCATACTGTCCACATGGCCTGGTCATCTGAGCCAACCCTATAGCAATGAAATGCTCATGTTCTGCCAATaGGAAGCTGGCTGTCAAATA | + |
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Preference number: 4 (lower is better) Translates to: AILSTWPGHLSQPYSNEMLMFCQ*EAGCQI Trigger: TATTTGACAGCCAGCTTCTCATTGGCAGAACATGAG...CATTTCATTGCTATAGGGTTGGCTCAGATGACCAGGCCATGTGGACAGTATGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071917.4 |
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| CDS-3UTR CCA 90 bp | TTAATTCTGAAGCTCCACCTTATAAAGGGAAGACCACAATGCCATACTGTCCACGCTTTGCCCGGGTCTTaGCATGTTCTTGCCAGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: LILKLHLIKGRPQCHTVHALPGS*HVLARF Trigger: GAACCTGGCAAGAACATGCCAAGACCCGGGCAAAGC...GTGGACAGTATGGCATTGTGGTCTTCCCTTTATAAGGTGGAGCTTCAGAATTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071917.4 |
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| CDS-3UTR TCA 90 bp | GCTCCACCTTATAAAGGGAAGACCACAATGCCATACTGTCCACATGGCCTGGTCATCTTATATCTACAGTaGCCACAATGTGCATCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: APPYKGKTTMPYCPHGLVILYLQ*PQCASQ Trigger: CTGAGATGCACATTGTGGTCACTGTAGATATAAGAT...GACCAGGCCATGTGGACAGTATGGCATTGTGGTCTTCCCTTTATAAGGTGGAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071917.4 |
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| CDS-3UTR TCA 90 bp | TGGCCTGGTCATCTGAGCCAACCCTATAGCAATGAAATGACAGATTTCATAGCCAAGACCCATTTCTTCTaGGGAGAGCAGTGGAGTTCA | + |
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Preference number: 4 (lower is better) Translates to: WPGHLSQPYSNEMTDFIAKTHFF*GEQWSS Trigger: TGAACTCCACTGCTCTCCTCAGAAGAAATGGGTCTT...GGCTATGAAATCTGTCATTTCATTGCTATAGGGTTGGCTCAGATGACCAGGCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071917.4 |
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| CDS-3UTR GCA 90 bp | AGCTCTGTAGATCAGGCTGGTCTCAGAACTCAGATCTTCCATCTGCCTCTGACTTTGGCCTCAGTAAGCTaGTCATGTAAAACACCTTTG | + |
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Preference number: 4 (lower is better) Translates to: SSVDQAGLRTQIFHLPLTLASVS*SCKTPL Trigger: CAAAGGTGTTTTACATGAGCAGCTTACTGAGGCCAA...AGTCAGAGGCAGATGGAAGATCTGAGTTCTGAGACCAGCCTGATCTACAGAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071917.4 |
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| CDS-3UTR GCA 90 bp | AAGGGAAGACCACAATGCCATACTGTCCACATGGCCTGGTCATCTGAGCCAACCTCCAGAAGGCTCTTTTaGATAAGGAAAATTCGAGAA | + |
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Preference number: 4 (lower is better) Translates to: KGRPQCHTVHMAWSSEPTSRRLF*IRKIRE Trigger: TTCTCGAATTTTCCTTATGCAAAAGAGCCTTCTGGA...GGTTGGCTCAGATGACCAGGCCATGTGGACAGTATGGCATTGTGGTCTTCCCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071917.4 |
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| CDS-3UTR CCA 90 bp | GCCATACTGTCCACATGGCCTGGTCATCTGAGCCAACCCTATAGCAATGAAATGATAGAATTCCTGTACTaGGCTTACCCAGGTCATAGT | + |
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Preference number: 4 (lower is better) Translates to: AILSTWPGHLSQPYSNEMIEFLY*AYPGHS Trigger: ACTATGACCTGGGTAAGCCCAGTACAGGAATTCTAT...CATTTCATTGCTATAGGGTTGGCTCAGATGACCAGGCCATGTGGACAGTATGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071917.4 |
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| CDS-3UTR TCA 90 bp | CCACCAAATTTGGCCACTTCAATGATTAGCAACACTGAAATCACCAGCCTTTGCACAGCTTTCAGTAATTaGCAGGAAGAGACCATGCGC | + |
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Preference number: 4 (lower is better) Translates to: PPNLATSMISNTEITSLCTAFSN*QEETMR Trigger: GCGCATGGTCTCTTCCTGTCAATTACTGAAAGCTGT...GCAAAGGCTGGTGATTTCAGTGTTGCTAATCATTGAAGTGGCCAAATTTGGTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071917.4 |
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| CDS-3UTR CCA 90 bp | GCTCCAAGTTTAATTCTGAAGCTCCACCTTATAAAGGGAAGACCACAATGCCATCCTGTCTTCCCTTCTTaGGGTCCAGAAGGCTCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: APSLILKLHLIKGRPQCHPVFPS*GPEGSF Trigger: AAAAGAGCCTTCTGGACCCCAAGAAGGGAAGACAGG...ATGGCATTGTGGTCTTCCCTTTATAAGGTGGAGCTTCAGAATTAAACTTGGAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071917.4 |
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| CDS-3UTR TCA 90 bp | GCTCCAAGTTTAATTCTGAAGCTCCACCTTATAAAGGGAAGACCACAATGCCATTGGGCAGTACTGAAATaGCTGCAGACAGAGACCATT | + |
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Preference number: 4 (lower is better) Translates to: APSLILKLHLIKGRPQCHWAVLK*LQTETI Trigger: AATGGTCTCTGTCTGCAGTCATTTCAGTACTGCCCA...ATGGCATTGTGGTCTTCCCTTTATAAGGTGGAGCTTCAGAATTAAACTTGGAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071917.4 |
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| CDS-3UTR CCA 90 bp | GCTCCAAGTTTAATTCTGAAGCTCCACCTTATAAAGGGAAGACCACAATGCCATGAGAACGGTAGACACTaGGTCAGAGAATTCTGTTGG | + |
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Preference number: 4 (lower is better) Translates to: APSLILKLHLIKGRPQCHENGRH*VREFCW Trigger: CCAACAGAATTCTCTGACCCAGTGTCTACCGTTCTC...ATGGCATTGTGGTCTTCCCTTTATAAGGTGGAGCTTCAGAATTAAACTTGGAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071917.4 |
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| CDS-3UTR TCA 90 bp | GCTCCAAGTTTAATTCTGAAGCTCCACCTTATAAAGGGAAGACCACAATGCCATAAACGTCCTTATCACTaGCTCCAAAGCATTCTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: APSLILKLHLIKGRPQCHKRPYH*LQSILV Trigger: GACCAGAATGCTTTGGAGTCAGTGATAAGGACGTTT...ATGGCATTGTGGTCTTCCCTTTATAAGGTGGAGCTTCAGAATTAAACTTGGAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071917.4 |
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| CDS-3UTR GCA 90 bp | AATTTGGCCACTTCAATGATTAGCAACACTGAAATCACCAGCCTTTGCTTGCAAGATGTTCAAGGTATATaGCATCAGATAGCAGGGGGC | + |
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Preference number: 4 (lower is better) Translates to: NLATSMISNTEITSLCLQDVQGI*HQIAGG Trigger: GCCCCCTGCTATCTGATGGCATATACCTTGAACATC...TTGCAAGCAAAGGCTGGTGATTTCAGTGTTGCTAATCATTGAAGTGGCCAAATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000071917.4 |
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| CDS-3UTR CCA 90 bp | AGCTCTGTAGATCAGGCTGGTCTCAGAACTCAGATCTTCCATCTGCCTCTGACTTTCATCAATAGCAAATaGGAATACATTCACCTCAGA | + |
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Preference number: 4 (lower is better) Translates to: SSVDQAGLRTQIFHLPLTFINSK*EYIHLR Trigger: TCTGAGGTGAATGTATTCCCATTTGCTATTGATGAA...AGTCAGAGGCAGATGGAAGATCTGAGTTCTGAGACCAGCCTGATCTACAGAGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071917.4 |
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| CDS-3UTR TCA 90 bp | TTAATTCTGAAGCTCCACCTTATAAAGGGAAGACCACAATGCCATACTGTCCACCAGGACTATTTGTCATaGCTCCAATTATGCTCACAT | + |
|
Preference number: 4 (lower is better) Translates to: LILKLHLIKGRPQCHTVHQDYLS*LQLCSH Trigger: ATGTGAGCATAATTGGAGTCATGACAAATAGTCCTG...GTGGACAGTATGGCATTGTGGTCTTCCCTTTATAAGGTGGAGCTTCAGAATTAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071917.4 |
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| CDS-3UTR TCA 90 bp | TTAATTCTGAAGCTCCACCTTATAAAGGGAAGACCACAATGCCATACTGTCCACCCACAGTTTGATAGTTaGTCTTATATCTACAGTGAC | + |
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Preference number: 4 (lower is better) Translates to: LILKLHLIKGRPQCHTVHPQFDS*SYIYSD Trigger: GTCACTGTAGATATAAGATCAACTATCAAACTGTGG...GTGGACAGTATGGCATTGTGGTCTTCCCTTTATAAGGTGGAGCTTCAGAATTAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071917.4 |
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| CDS-3UTR GCA 90 bp | TTAATTCTGAAGCTCCACCTTATAAAGGGAAGACCACAATGCCATACTGTCCACGCTTCATATCAAATATaGCAAATTTTGTGTGGCTTG | + |
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Preference number: 4 (lower is better) Translates to: LILKLHLIKGRPQCHTVHASYQI*QILCGL Trigger: CAAGCCACACAAAATTTGGCATATTTGATATGAAGC...GTGGACAGTATGGCATTGTGGTCTTCCCTTTATAAGGTGGAGCTTCAGAATTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071917.4 |
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| CDS-3UTR CCA 90 bp | CTTGCAAATAGACATCTATTTTCATTGAGGAAGAGGACACACAATCACTCAGTTTTGGGGGTACATTTCTaGACATCAAGGTTATCCTGT | + |
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Preference number: 4 (lower is better) Translates to: LANRHLFSLRKRTHNHSVLGVHF*TSRLSC Trigger: ACAGGATAACCTTGATGTCCAGAAATGTACCCCCAA...AACTGAGTGATTGTGTGTCCTCTTCCTCAATGAAAATAGATGTCTATTTGCAAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000071917.4 |
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| CDS-3UTR CCA 90 bp | CTTGCAAATAGACATCTATTTTCATTGAGGAAGAGGACACACAATCACTCAGTTAAATTTTGTGTGGCTTaGGGGTACATTTCTGGACAT | + |
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Preference number: 4 (lower is better) Translates to: LANRHLFSLRKRTHNHSVKFCVA*GYISGH Trigger: ATGTCCAGAAATGTACCCCCAAGCCACACAAAATTT...AACTGAGTGATTGTGTGTCCTCTTCCTCAATGAAAATAGATGTCTATTTGCAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000071917.4 |
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| CDS-3UTR CCA 90 bp | AGCCAAATGATTTGTACATCTAGCCATAAGTTTTGTTTCAGAGATAGGTTCTCTCTGCCAATGAGAAGCTaGCTGTCAAATATCCTTGAA | + |
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Preference number: 4 (lower is better) Translates to: SQMICTSSHKFCFRDRFSLPMRS*LSNILE Trigger: TTCAAGGATATTTGACAGCCAGCTTCTCATTGGCAG...AGAGAACCTATCTCTGAAACAAAACTTATGGCTAGATGTACAAATCATTTGGCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071917.4 |
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| CDS-3UTR CAA 90 bp | TCCACATGGCCTGGTCATCTGAGCCAACCCTATAGCAATGAAATGACAGATTTCTCCTGTCTTCCCTTCTaGGGGTCCAGAAGGCTCTTT | + |
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Preference number: 5 (lower is better) Translates to: STWPGHLSQPYSNEMTDFSCLPF*GSRRLF Trigger: AAAGAGCCTTCTGGACCCCAAGAAGGGAAGACAGGA...GAAATCTGTCATTTCATTGCTATAGGGTTGGCTCAGATGACCAGGCCATGTGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071917.4 |
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| CDS-3UTR CAA 90 bp | AAGGGAAGACCACAATGCCATACTGTCCACATGGCCTGGTCATCTGAGCCAACCTCATGTAAAACACCTTaGTCAAGACATGTGGGTGTT | + |
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Preference number: 5 (lower is better) Translates to: KGRPQCHTVHMAWSSEPTSCKTP*SRHVGV Trigger: AACACCCACATGTCTTGACAAAGGTGTTTTACATGA...GGTTGGCTCAGATGACCAGGCCATGTGGACAGTATGGCATTGTGGTCTTCCCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071917.4 |
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| CDS-3UTR CAA 90 bp | GCCATACTGTCCACATGGCCTGGTCATCTGAGCCAACCCTATAGCAATGAAATGTCATCACATAGTGCTTaGTTAATGAAGCTGGACGGG | + |
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Preference number: 5 (lower is better) Translates to: AILSTWPGHLSQPYSNEMSSHSA*LMKLDG Trigger: CCCGTCCAGCTTCATTAACAAAGCACTATGTGATGA...CATTTCATTGCTATAGGGTTGGCTCAGATGACCAGGCCATGTGGACAGTATGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071917.4 |
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| CDS TCA 90 bp | ATGCATAAGCCCGAAATTCAAACTCCACAGGAATTTCCTTGTAAGTaGAATCTTCTGGCTTTGCCCGGGTCTTGGCATGTTCTTGCCAGG | + |
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Preference number: 5 (lower is better) Translates to: MHKPEIQTPQEFPCK*NLLALPGSWHVLAR Trigger: CCTGGCAAGAACATGCCAAGACCCGGGCAAAGCCAGAAGATTTCACTTACAAGGAAATTCCTGTGGAGTTTGAATTTCGGGCTTATGCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071917.4 |
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| CDS TCA 90 bp | GCAAGAGAGAGGATCCAGTTGAACACACAAAAACGTCCTTATCACTaGCTCCAAAGCATTCTGGTCTCCCCTCATGTTCTGCCAATGAGA | + |
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Preference number: 5 (lower is better) Translates to: ARERIQLNTQKRPYH*LQSILVSPHVLPMR Trigger: TCTCATTGGCAGAACATGAGGGGAGACCAGAATGCTTTGGAGTCAGTGATAAGGACGTTTTTGTGTGTTCAACTGGATCCTCTCTCTTGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000071917.4 |
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| CDS TCA 90 bp | ATCAAGACAATCGGGCCATCCTTTGTAATGACAGCTTTCAGTAATTaGCAGGAAGAGACCATGCGCTTAGTTGCTAGAGCTTCGCTGTTG | + |
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Preference number: 5 (lower is better) Translates to: IKTIGPSFVMTAFSN*QEETMRLVARASLL Trigger: CAACAGCGAAGCTCTAGCAACTAAGCGCATGGTCTCTTCCTGTCAATTACTGAAAGCTGTCATTACAAAGGATGGCCCGATTGTCTTGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071917.4 |
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| CDS-3UTR CAA 90 bp | TGGCCTGGTCATCTGAGCCAACCCTATAGCAATGAAATGACAGATTTCATAGCCCAAATATGCCAAATTTaGTGTGGCTTGGGGGTACAT | + |
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Preference number: 5 (lower is better) Translates to: WPGHLSQPYSNEMTDFIAQICQI*CGLGVH Trigger: ATGTACCCCCAAGCCACACAAAATTTGGCATATTTG...GGCTATGAAATCTGTCATTTCATTGCTATAGGGTTGGCTCAGATGACCAGGCCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000071917.4 |
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| CDS-3UTR CAA 90 bp | TGGCCTGGTCATCTGAGCCAACCCTATAGCAATGAAATGACAGATTTCATAGCCACATCCAAAGAGCCATaGTTACAGGTGATGATGACA | + |
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Preference number: 5 (lower is better) Translates to: WPGHLSQPYSNEMTDFIATSKEP*LQVMMT Trigger: TGTCATCATCACCTGTAACAATGGCTCTTTGGATGT...GGCTATGAAATCTGTCATTTCATTGCTATAGGGTTGGCTCAGATGACCAGGCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071917.4 |
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| CDS CCA 90 bp | TTCCCGATCTCTTCCAGCTTCATATCAAATATGCCAAATTTTGTGTaGCTTGGGGGTACATTTCTGGACATCAAGGTTATCCTGTCTTCC | + |
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Preference number: 5 (lower is better) Translates to: FPISSSFISNMPNFV*LGGTFLDIKVILSS Trigger: GGAAGACAGGATAACCTTGATGTCCAGAAATGTACCCCCAAGCCACACAAAATTTGGCATATTTGATATGAAGCTGGAAGAGATCGGGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000071917.4 |
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| CDS CCA 90 bp | GATCTCTTCCAGCTTCATATCAAATATGCCAAATTTTGTGTGGCTTaGGGGTACATTTCTGGACATCAAGGTTATCCTGTCTTCCCTTCT | + |
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Preference number: 5 (lower is better) Translates to: DLFQLHIKYAKFCVA*GYISGHQGYPVFPS Trigger: AGAAGGGAAGACAGGATAACCTTGATGTCCAGAAATGTACCCCCAAGCCACACAAAATTTGGCATATTTGATATGAAGCTGGAAGAGATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071917.4 |
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| CDS-3UTR CAA 90 bp | CACCAGCCTTTGCTTGCAAATAGACATCTATTTTCATTGAGGAAGAGGACACACGGCTGTCAAATATCCTaGAATAGTTACTTTGTTCCC | + |
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Preference number: 5 (lower is better) Translates to: HQPLLANRHLFSLRKRTHGCQIS*NSYFVP Trigger: GGGAACAAAGTAACTATTCAAGGATATTTGACAGCC...GTGTGTCCTCTTCCTCAATGAAAATAGATGTCTATTTGCAAGCAAAGGCTGGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071917.4 |
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| CDS CAA 72 bp | GAAATCTTCTGGCTTTGCCCGGGTCTTGGCATGTTCTaGCCAGGTTCGGTAAACGAAGAACTGCTTCCATGT | + |
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Preference number: 6 (lower is better) Translates to: EIFWLCPGLGMF*PGSVNEELLPC Trigger: ACATGGAAGCAGTTCTTCGTTTACCGAACCTGGCAAGAACATGCCAAGACCCGGGCAAAGCCAGAAGATTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071917.4 |
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| CDS CAA 90 bp | CTTGTAAGTGAAATCTTCTGGCTTTGCCCGGGTCTTGGCATGTTCTaGCCAGGTTCGGTAAACGAAGAACTGCTTCCATGTCTCTTTGCC | + |
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Preference number: 6 (lower is better) Translates to: LVSEIFWLCPGLGMF*PGSVNEELLPCLFA Trigger: GGCAAAGAGACATGGAAGCAGTTCTTCGTTTACCGAACCTGGCAAGAACATGCCAAGACCCGGGCAAAGCCAGAAGATTTCACTTACAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071917.4 |
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| CDS GCA 72 bp | CACAGGAATTTCCTTGTAAGTGAAATCTTCTGGCTTTaGCCGGGTCTTGGCATGTTCTTGCCAGGTTCGGTA | + |
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Preference number: 6 (lower is better) Translates to: HRNFLVSEIFWL*PGLGMFLPGSV Trigger: TACCGAACCTGGCAAGAACATGCCAAGACCCGGGCAAAGCCAGAAGATTTCACTTACAAGGAAATTCCTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071917.4 |
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| CDS CAA 72 bp | ATCCTGTCTTCCCTTCTTGGGGTCCAGAAGGCTCTTTaGCATAAGGAAAATTCGAGAACGGTAGACACTGGG | + |
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Preference number: 6 (lower is better) Translates to: ILSSLLGVQKAL*HKENSRTVDTG Trigger: CCCAGTGTCTACCGTTCTCGAATTTTCCTTATGCAAAAGAGCCTTCTGGACCCCAAGAAGGGAAGACAGGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071917.4 |
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| CDS CCA 72 bp | AAACTCCACAGGAATTTCCTTGTAAGTGAAATCTTCTaGCTTTGCCCGGGTCTTGGCATGTTCTTGCCAGGT | + |
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Preference number: 6 (lower is better) Translates to: KLHRNFLVSEIF*LCPGLGMFLPG Trigger: ACCTGGCAAGAACATGCCAAGACCCGGGCAAAGCCAGAAGATTTCACTTACAAGGAAATTCCTGTGGAGTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071917.4 |
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| CDS CAA 90 bp | ATCAAGGTTATCCTGTCTTCCCTTCTTGGGGTCCAGAAGGCTCTTTaGCATAAGGAAAATTCGAGAACGGTAGACACTGGGTCAGAGAAT | + |
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Preference number: 6 (lower is better) Translates to: IKVILSSLLGVQKAL*HKENSRTVDTGSEN Trigger: ATTCTCTGACCCAGTGTCTACCGTTCTCGAATTTTCCTTATGCAAAAGAGCCTTCTGGACCCCAAGAAGGGAAGACAGGATAACCTTGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071917.4 |
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| CDS TCA 72 bp | CCCGAAATTCAAACTCCACAGGAATTTCCTTGTAAGTaGAATCTTCTGGCTTTGCCCGGGTCTTGGCATGTT | + |
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Preference number: 6 (lower is better) Translates to: PEIQTPQEFPCK*NLLALPGSWHV Trigger: AACATGCCAAGACCCGGGCAAAGCCAGAAGATTTCACTTACAAGGAAATTCCTGTGGAGTTTGAATTTCGGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071917.4 |
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| CDS TCA 72 bp | ATCGGGCCATCCTTTGTAATGACAGCTTTCAGTAATTaGCAGGAAGAGACCATGCGCTTAGTTGCTAGAGCT | + |
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Preference number: 6 (lower is better) Translates to: IGPSFVMTAFSN*QEETMRLVARA Trigger: AGCTCTAGCAACTAAGCGCATGGTCTCTTCCTGTCAATTACTGAAAGCTGTCATTACAAAGGATGGCCCGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071917.4 |
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| CDS TCA 72 bp | AGGATCCAGTTGAACACACAAAAACGTCCTTATCACTaGCTCCAAAGCATTCTGGTCTCCCCTCATGTTCTG | + |
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Preference number: 6 (lower is better) Translates to: RIQLNTQKRPYH*LQSILVSPHVL Trigger: CAGAACATGAGGGGAGACCAGAATGCTTTGGAGTCAGTGATAAGGACGTTTTTGTGTGTTCAACTGGATCCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000071917.4 |
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| CDS GCA 72 bp | ACACTGGGTCAGAGAATTCTGTTGGCCTCAGTAAGCTaGTCATGTAAAACACCTTTGTCAAGACATGTGGGT | + |
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Preference number: 6 (lower is better) Translates to: TLGQRILLASVS*SCKTPLSRHVG Trigger: ACCCACATGTCTTGACAAAGGTGTTTTACATGAGCAGCTTACTGAGGCCAACAGAATTCTCTGACCCAGTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071917.4 |
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| CDS CCA 72 bp | ATATGCCAAATTTTGTGTGGCTTGGGGGTACATTTCTaGACATCAAGGTTATCCTGTCTTCCCTTCTTGGGG | + |
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Preference number: 6 (lower is better) Translates to: ICQILCGLGVHF*TSRLSCLPFLG Trigger: CCCCAAGAAGGGAAGACAGGATAACCTTGATGTCCAGAAATGTACCCCCAAGCCACACAAAATTTGGCATAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000071917.4 |
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| CDS CAA 72 bp | ATGACTCCAATTATGCTCACATCATCACATAGTGCTTaGTTAATGAAGCTGGACGGGGGCAGGTATCTCCTG | + |
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Preference number: 6 (lower is better) Translates to: MTPIMLTSSHSA*LMKLDGGRYLL Trigger: CAGGAGATACCTGCCCCCGTCCAGCTTCATTAACAAAGCACTATGTGATGATGTGAGCATAATTGGAGTCAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000071917.4 |
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| CDS TCA 72 bp | GAGACCATGCGCTTAGTTGCTAGAGCTTCGCTGTTGTaGCAGTCCCACAGTTTGATAGTTGATCTTATATCT | + |
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Preference number: 6 (lower is better) Translates to: ETMRLVARASLL*QSHSLIVDLIS Trigger: AGATATAAGATCAACTATCAAACTGTGGGACTGTCACAACAGCGAAGCTCTAGCAACTAAGCGCATGGTCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071917.4 |
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| CDS TCA 72 bp | TCCAAAGCATTCTGGTCTCCCCTCATGTTCTGCCAATaGGAAGCTGGCTGTCAAATATCCTTGAATAGTTAC | + |
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Preference number: 6 (lower is better) Translates to: SKAFWSPLMFCQ*EAGCQISLNSY Trigger: GTAACTATTCAAGGATATTTGACAGCCAGCTTCTCATTGGCAGAACATGAGGGGAGACCAGAATGCTTTGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071917.4 |
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| CDS TCA 72 bp | AGCTTCGCTGTTGTGACAGTCCCACAGTTTGATAGTTaGTCTTATATCTACAGTGACCACAATGTGCATCTC | + |
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Preference number: 6 (lower is better) Translates to: SFAVVTVPQFDS*SYIYSDHNVHL Trigger: GAGATGCACATTGTGGTCACTGTAGATATAAGATCAACTATCAAACTGTGGGACTGTCACAACAGCGAAGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071917.4 |
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| CDS TCA 72 bp | TGTGGGTGTTTCATAATCAGAAAGACCCATTTCTTCTaGGGAGAGCAGTGGAGTTCATCAATAGCAAATGGG | + |
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Preference number: 6 (lower is better) Translates to: CGCFIIRKTHFF*GEQWSSSIANG Trigger: CCCATTTGCTATTGATGAACTCCACTGCTCTCCTCAGAAGAAATGGGTCTTTCTGATTATGAAACACCCACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071917.4 |
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| CDS TCA 72 bp | ACATCCAAAGAGCCATTGTTACAGGTGATGATGACATaGACAGGATCCACACAGAGTCTCGTGATCATTTCT | + |
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Preference number: 6 (lower is better) Translates to: TSKEPLLQVMMT*TGSTQSLVIIS Trigger: AGAAATGATCACGAGACTCTGTGTGGATCCTGTTCATGTCATCATCACCTGTAACAATGGCTCTTTGGATGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071917.4 |
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| CDS GCA 72 bp | CTTTGTTCCCGATCTCTTCCAGCTTCATATCAAATATaGCAAATTTTGTGTGGCTTGGGGGTACATTTCTGG | + |
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Preference number: 6 (lower is better) Translates to: LCSRSLPASYQI*QILCGLGVHFW Trigger: CCAGAAATGTACCCCCAAGCCACACAAAATTTGGCATATTTGATATGAAGCTGGAAGAGATCGGGAACAAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000071917.4 |
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| CDS TCA 72 bp | ACCATTTATGTCGAAGAGCAAGAGAGAGGATCCAGTTaGACACACAAAAACGTCCTTATCACTGACTCCAAA | + |
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Preference number: 6 (lower is better) Translates to: TIYVEEQERGSS*THKNVLITDSK Trigger: TTTGGAGTCAGTGATAAGGACGTTTTTGTGTGTTCAACTGGATCCTCTCTCTTGCTCTTCGACATAAATGGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000071917.4 |
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| CDS CAA 72 bp | CCAGCTTCATATCAAATATGCCAAATTTTGTGTGGCTaGGGGGTACATTTCTGGACATCAAGGTTATCCTGT | + |
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Preference number: 6 (lower is better) Translates to: PASYQICQILCG*GVHFWTSRLSC Trigger: ACAGGATAACCTTGATGTCCAGAAATGTACCCCCAAGCCACACAAAATTTGGCATATTTGATATGAAGCTGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000071917.4 |
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| CDS CCA 72 bp | TCTTCCAGCTTCATATCAAATATGCCAAATTTTGTGTaGCTTGGGGGTACATTTCTGGACATCAAGGTTATC | + |
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Preference number: 6 (lower is better) Translates to: SSSFISNMPNFV*LGGTFLDIKVI Trigger: GATAACCTTGATGTCCAGAAATGTACCCCCAAGCCACACAAAATTTGGCATATTTGATATGAAGCTGGAAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000071917.4 |
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| CDS CAA 90 bp | TACAGACAGCAGACTTCCCTTGTCCATTTCTCTTTAAGCCATGTTTaGAGATATAATATGCATAAGCCCGAAATTCAAACTCCACAGGAA | + |
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Preference number: 6 (lower is better) Translates to: YRQQTSLVHFSLSHV*RYNMHKPEIQTPQE Trigger: TTCCTGTGGAGTTTGAATTTCGGGCTTATGCATATTATATCTCAAAACATGGCTTAAAGAGAAATGGACAAGGGAAGTCTGCTGTCTGTA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071917.4 |
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