Pregenerated sensors for FBXW25 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000094992Ensembl transcript IDs: ENSMUST00000163839.3
Found 57 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR CCA 90 bp | GGGCTTGCAAATAGACCTTTATTATCATTGAGGAAGAGACACACAACCCACTCACCTGTCTTCCCTTCTTaGTGTCCAGAAGGCTCCTTG | + |
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Preference number: 4 (lower is better) Translates to: GLANRPLLSLRKRHTTHSPVFPS*CPEGSL Trigger: CAAGGAGCCTTCTGGACACCAAGAAGGGAAGACAGG...TGAGTGGGTTGTGTGTCTCTTCCTCAATGATAATAAAGGTCTATTTGCAAGCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163839.3 |
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| CDS-3UTR TCA 90 bp | GGGCTTGCAAATAGACCTTTATTATCATTGAGGAAGAGACACACAACCCACTCATCACATCCTTATCACTaGCACCAATCCAGTTGGGGC | + |
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Preference number: 4 (lower is better) Translates to: GLANRPLLSLRKRHTTHSSHPYH*HQSSWG Trigger: GCCCCAACTGGATTGGTGTCAGTGATAAGGATGTGA...TGAGTGGGTTGTGTGTCTCTTCCTCAATGATAATAAAGGTCTATTTGCAAGCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163839.3 |
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| CDS-3UTR TCA 90 bp | GGGCTTGCAAATAGACCTTTATTATCATTGAGGAAGAGACACACAACCCACTCAGTCGATAACACTTCCTaGGCAACAGGCTTCTCTCCT | + |
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Preference number: 4 (lower is better) Translates to: GLANRPLLSLRKRHTTHSVDNTS*ATGFSP Trigger: AGGAGAGAAGCCTGTTGCTCAGGAAGTGTTATCGAC...TGAGTGGGTTGTGTGTCTCTTCCTCAATGATAATAAAGGTCTATTTGCAAGCCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163839.3 |
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| CDS-3UTR GCA 90 bp | GGGCTTGCAAATAGACCTTTATTATCATTGAGGAAGAGACACACAACCCACTCATCCACAGGACATCACTaGTGGCAAGTGCATTCCAGT | + |
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Preference number: 4 (lower is better) Translates to: GLANRPLLSLRKRHTTHSSTGHH*WQVHSS Trigger: ACTGGAATGCACTTGCCAGCAGTGATGTCCTGTGGA...TGAGTGGGTTGTGTGTCTCTTCCTCAATGATAATAAAGGTCTATTTGCAAGCCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163839.3 |
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| CDS-3UTR CCA 90 bp | GGGCTTGCAAATAGACCTTTATTATCATTGAGGAAGAGACACACAACCCACTCACAGGTTGATACTTGCTaGCTGTACTGGGCTTACCCA | + |
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Preference number: 4 (lower is better) Translates to: GLANRPLLSLRKRHTTHSQVDTC*LYWAYP Trigger: TGGGTAAGCCCAGTACAGCCAGCAAGTATCAACCTG...TGAGTGGGTTGTGTGTCTCTTCCTCAATGATAATAAAGGTCTATTTGCAAGCCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163839.3 |
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| CDS-3UTR GCA 90 bp | GGGCTTGCAAATAGACCTTTATTATCATTGAGGAAGAGACACACAACCCACTCACAACAGGTTGATACTTaGTGGCTGTACTGGGCTTAC | + |
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Preference number: 4 (lower is better) Translates to: GLANRPLLSLRKRHTTHSQQVDT*WLYWAY Trigger: GTAAGCCCAGTACAGCCAGCAAGTATCAACCTGTTG...TGAGTGGGTTGTGTGTCTCTTCCTCAATGATAATAAAGGTCTATTTGCAAGCCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163839.3 |
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| CDS-3UTR GCA 90 bp | GGGCTTGCAAATAGACCTTTATTATCATTGAGGAAGAGACACACAACCCACTCAGATGTTCAAGGCATATaGAATCAGAGAGTAGGGGCC | + |
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Preference number: 4 (lower is better) Translates to: GLANRPLLSLRKRHTTHSDVQGI*NQRVGA Trigger: GGCCCCTACTCTCTGATTGCATATGCCTTGAACATC...TGAGTGGGTTGTGTGTCTCTTCCTCAATGATAATAAAGGTCTATTTGCAAGCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163839.3 |
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| CDS-3UTR CCA 90 bp | GGGCTTGCAAATAGACCTTTATTATCATTGAGGAAGAGACACACAACCCACTCAACAGGACATCACTGCTaGCAAGTGCATTCCAGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: GLANRPLLSLRKRHTTHSTGHHC*QVHSSS Trigger: AGAACTGGAATGCACTTGCCAGCAGTGATGTCCTGT...TGAGTGGGTTGTGTGTCTCTTCCTCAATGATAATAAAGGTCTATTTGCAAGCCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163839.3 |
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| CDS-3UTR TCA 90 bp | GGGCTTGCAAATAGACCTTTATTATCATTGAGGAAGAGACACACAACCCACTCACCATCTCTCATCAACTaGACTATGCTCACATCGTCA | + |
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Preference number: 4 (lower is better) Translates to: GLANRPLLSLRKRHTTHSPSLIN*TMLTSS Trigger: TGACGATGTGAGCATAGTTCAGTTGATGAGAGATGG...TGAGTGGGTTGTGTGTCTCTTCCTCAATGATAATAAAGGTCTATTTGCAAGCCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163839.3 |
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| CDS-3UTR GCA 90 bp | GGGCTTGCAAATAGACCTTTATTATCATTGAGGAAGAGACACACAACCCACTCAATCACTGCTGGCAAGTaGATTCCAGTTCTTGTTCAC | + |
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Preference number: 4 (lower is better) Translates to: GLANRPLLSLRKRHTTHSITAGK*IPVLVH Trigger: GTGAACAAGAACTGGAATGCACTTGCCAGCAGTGAT...TGAGTGGGTTGTGTGTCTCTTCCTCAATGATAATAAAGGTCTATTTGCAAGCCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163839.3 |
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| CDS-3UTR CCA 90 bp | GGGCTTGCAAATAGACCTTTATTATCATTGAGGAAGAGACACACAACCCACTCACAGTTCTTGTTCACTTaGGCAGCCTGTAGCAAATTG | + |
|
Preference number: 4 (lower is better) Translates to: GLANRPLLSLRKRHTTHSQFLFT*AACSKL Trigger: CAATTTGCTACAGGCTGCCCAAGTGAACAAGAACTG...TGAGTGGGTTGTGTGTCTCTTCCTCAATGATAATAAAGGTCTATTTGCAAGCCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163839.3 |
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| CDS-3UTR CCA 90 bp | GGGCTTGCAAATAGACCTTTATTATCATTGAGGAAGAGACACACAACCCACTCAGTCCAGAAGGCTCCTTaGCATAAGGAAAATTCGAGA | + |
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Preference number: 4 (lower is better) Translates to: GLANRPLLSLRKRHTTHSVQKAP*HKENSR Trigger: TCTCGAATTTTCCTTATGCCAAGGAGCCTTCTGGAC...TGAGTGGGTTGTGTGTCTCTTCCTCAATGATAATAAAGGTCTATTTGCAAGCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163839.3 |
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| CDS-3UTR TCA 90 bp | GGGCTTGCAAATAGACCTTTATTATCATTGAGGAAGAGACACACAACCCACTCAGCTATCAATTTTCCTTaGACAGCTACTTTGTTCCCG | + |
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Preference number: 4 (lower is better) Translates to: GLANRPLLSLRKRHTTHSAINFP*TATLFP Trigger: CGGGAACAAAGTAGCTGTTCAAGGAAAATTGATAGC...TGAGTGGGTTGTGTGTCTCTTCCTCAATGATAATAAAGGTCTATTTGCAAGCCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163839.3 |
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| CDS-3UTR CCA 90 bp | GGGCTTGCAAATAGACCTTTATTATCATTGAGGAAGAGACACACAACCCACTCATCAAACTTTGTGATTTaGGGGAAACCACTTCTGGAC | + |
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Preference number: 4 (lower is better) Translates to: GLANRPLLSLRKRHTTHSSNFVI*GKPLLD Trigger: GTCCAGAAGTGGTTTCCCCCAAATCACAAAGTTTGA...TGAGTGGGTTGTGTGTCTCTTCCTCAATGATAATAAAGGTCTATTTGCAAGCCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163839.3 |
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| CDS-3UTR CCA 90 bp | GGGCTTGCAAATAGACCTTTATTATCATTGAGGAAGAGACACACAACCCACTCAAATGAAGCCGTACAGTaGCAGAGGTCTCTTATTTTG | + |
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Preference number: 4 (lower is better) Translates to: GLANRPLLSLRKRHTTHSNEAVQ*QRSLIL Trigger: CAAAATAAGAGACCTCTGCCACTGTACGGCTTCATT...TGAGTGGGTTGTGTGTCTCTTCCTCAATGATAATAAAGGTCTATTTGCAAGCCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163839.3 |
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| CDS-3UTR TCA 90 bp | GGGCTTGCAAATAGACCTTTATTATCATTGAGGAAGAGACACACAACCCACTCAATTGAATATCTACAGTaGCCGCAATGTGCATATCAG | + |
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Preference number: 4 (lower is better) Translates to: GLANRPLLSLRKRHTTHSIEYLQ*PQCAYQ Trigger: CTGATATGCACATTGCGGTCACTGTAGATATTCAAT...TGAGTGGGTTGTGTGTCTCTTCCTCAATGATAATAAAGGTCTATTTGCAAGCCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163839.3 |
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| CDS-3UTR TCA 90 bp | GGGCTTGCAAATAGACCTTTATTATCATTGAGGAAGAGACACACAACCCACTCAAAGACCCATTTCTTCTaGGGAGAGCAATCAATTTCA | + |
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Preference number: 4 (lower is better) Translates to: GLANRPLLSLRKRHTTHSKTHFF*GEQSIS Trigger: TGAAATTGATTGCTCTCCTCAGAAGAAATGGGTCTT...TGAGTGGGTTGTGTGTCTCTTCCTCAATGATAATAAAGGTCTATTTGCAAGCCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163839.3 |
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| CDS-3UTR TCA 90 bp | GGGCTTGCAAATAGACCTTTATTATCATTGAGGAAGAGACACACAACCCACTCAATGTTTCAAACTTTGTaGTTTGGGGGAAACCACTTC | + |
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Preference number: 4 (lower is better) Translates to: GLANRPLLSLRKRHTTHSMFQTL*FGGNHF Trigger: GAAGTGGTTTCCCCCAAATCACAAAGTTTGAAACAT...TGAGTGGGTTGTGTGTCTCTTCCTCAATGATAATAAAGGTCTATTTGCAAGCCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000163839.3 |
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| CDS-3UTR CCA 90 bp | GGGCTTGCAAATAGACCTTTATTATCATTGAGGAAGAGACACACAACCCACTCAGCTCTCCTCATAATATaGCAAGAAGAAGCTTGCTAT | + |
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Preference number: 4 (lower is better) Translates to: GLANRPLLSLRKRHTTHSALLII*QEEACY Trigger: ATAGCAAGCTTCTTCTTGCCATATTATGAGGAGAGC...TGAGTGGGTTGTGTGTCTCTTCCTCAATGATAATAAAGGTCTATTTGCAAGCCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163839.3 |
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| CDS-3UTR TCA 90 bp | GGGCTTGCAAATAGACCTTTATTATCATTGAGGAAGAGACACACAACCCACTCAGAGAAAGAAGTGAGTTaGACAAACAATCACATCCTT | + |
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Preference number: 4 (lower is better) Translates to: GLANRPLLSLRKRHTTHSEKEVS*TNNHIL Trigger: AAGGATGTGATTGTTTGTTCAACTCACTTCTTTCTC...TGAGTGGGTTGTGTGTCTCTTCCTCAATGATAATAAAGGTCTATTTGCAAGCCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163839.3 |
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| CDS-3UTR TCA 90 bp | GGGCTTGCAAATAGACCTTTATTATCATTGAGGAAGAGACACACAACCCACTCAAGCAAGAGAAAGAAGTaGGTTGAACAAACAATCACA | + |
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Preference number: 4 (lower is better) Translates to: GLANRPLLSLRKRHTTHSSKRKK*VEQTIT Trigger: TGTGATTGTTTGTTCAACTCACTTCTTTCTCTTGCT...TGAGTGGGTTGTGTGTCTCTTCCTCAATGATAATAAAGGTCTATTTGCAAGCCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163839.3 |
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| CDS CCA 90 bp | AGTGCCATCTCCTCTGACACAATTTCCTCCACAGGACATCACTGCTaGCAAGTGCATTCCAGTTCTTGTTCACTTGGGCAGCCTGTAGCA | + |
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Preference number: 5 (lower is better) Translates to: SAISSDTISSTGHHC*QVHSSSCSLGQPVA Trigger: TGCTACAGGCTGCCCAAGTGAACAAGAACTGGAATGCACTTGCCAGCAGTGATGTCCTGTGGAGGAAATTGTGTCAGAGGAGATGGCACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163839.3 |
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| CDS GCA 90 bp | AATAGTGCCATCTCCTCTGACACAATTTCCTCCACAGGACATCACTaGTGGCAAGTGCATTCCAGTTCTTGTTCACTTGGGCAGCCTGTA | + |
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Preference number: 5 (lower is better) Translates to: NSAISSDTISSTGHH*WQVHSSSCSLGQPV Trigger: TACAGGCTGCCCAAGTGAACAAGAACTGGAATGCACTTGCCAGCAGTGATGTCCTGTGGAGGAAATTGTGTCAGAGGAGATGGCACTATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163839.3 |
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| CDS TCA 90 bp | GCCTACCAAGACAATTGGGCCATCCTTGGAAATGACAGCTTTCAGTaGTTTACATGGAGATTCCAGGTTGTTAGTCGCCAGAGCTTCCCT | + |
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Preference number: 5 (lower is better) Translates to: AYQDNWAILGNDSFQ*FTWRFQVVSRQSFP Trigger: AGGGAAGCTCTGGCGACTAACAACCTGGAATCTCCATGTAAATCACTGAAAGCTGTCATTTCCAAGGATGGCCCAATTGTCTTGGTAGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163839.3 |
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| CDS CCA 90 bp | GACGATGACATGAACAGGGTCCACACAGAGTCTCACGATCGTTTCTaGGCAGTACTGAAATGTCTGCAGATGGAGACCATTGATGGTAAA | + |
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Preference number: 5 (lower is better) Translates to: DDDMNRVHTESHDRF*AVLKCLQMETIDGK Trigger: TTTACCATCAATGGTCTCCATCTGCAGACATTTCAGTACTGCCCAGAAACGATCGTGAGACTCTGTGTGGACCCTGTTCATGTCATCGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163839.3 |
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| CDS TCA 90 bp | ATGCGTATCCATAAAATCCACACTCCACAGGAATTTCCTTGTAAGTaGAATCTTCTGGCTTTGCCCGGGTCTTGGCGTGTTCTTGCCATA | + |
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Preference number: 5 (lower is better) Translates to: MRIHKIHTPQEFPCK*NLLALPGSWRVLAI Trigger: TATGGCAAGAACACGCCAAGACCCGGGCAAAGCCAGAAGATTTCACTTACAAGGAAATTCCTGTGGAGTGTGGATTTTATGGATACGCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163839.3 |
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| CDS GCA 90 bp | ACCAATCCAGTTGGGGCTCTCCTCATAATATGGCAAGAAGAAGCTTaGTATCAATTTTCCTTGAACAGCTACTTTGTTCCCGATCCCTTC | + |
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Preference number: 5 (lower is better) Translates to: TNPVGALLIIWQEEA*YQFSLNSYFVPDPF Trigger: GAAGGGATCGGGAACAAAGTAGCTGTTCAAGGAAAATTGATAGCAAGCTTCTTCTTGCCATATTATGAGGAGAGCCCCAACTGGATTGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163839.3 |
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| CDS CCA 90 bp | ATAAAATCCACACTCCACAGGAATTTCCTTGTAAGTGAAATCTTCTaGCTTTGCCCGGGTCTTGGCGTGTTCTTGCCATATTCGGTAAAT | + |
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Preference number: 5 (lower is better) Translates to: IKSTLHRNFLVSEIF*LCPGLGVFLPYSVN Trigger: ATTTACCGAATATGGCAAGAACACGCCAAGACCCGGGCAAAGCCAGAAGATTTCACTTACAAGGAAATTCCTGTGGAGTGTGGATTTTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163839.3 |
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| CDS-3UTR CAA 90 bp | GGGCTTGCAAATAGACCTTTATTATCATTGAGGAAGAGACACACAACCCACTCAACATCCAAAGAGCCATaGTTACAGGTGACGATGACA | + |
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Preference number: 5 (lower is better) Translates to: GLANRPLLSLRKRHTTHSTSKEP*LQVTMT Trigger: TGTCATCGTCACCTGTAACAATGGCTCTTTGGATGT...TGAGTGGGTTGTGTGTCTCTTCCTCAATGATAATAAAGGTCTATTTGCAAGCCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163839.3 |
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| CDS-3UTR CAA 90 bp | GGGCTTGCAAATAGACCTTTATTATCATTGAGGAAGAGACACACAACCCACTCACCATATGGGAATACATaGACTGTGGAAATGAGGTGT | + |
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Preference number: 5 (lower is better) Translates to: GLANRPLLSLRKRHTTHSPYGNT*TVEMRC Trigger: ACACCTCATTTCCACAGTCAATGTATTCCCATATGG...TGAGTGGGTTGTGTGTCTCTTCCTCAATGATAATAAAGGTCTATTTGCAAGCCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163839.3 |
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| CDS CCA 90 bp | ATCCTTATCACTGACACCAATCCAGTTGGGGCTCTCCTCATAATATaGCAAGAAGAAGCTTGCTATCAATTTTCCTTGAACAGCTACTTT | + |
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Preference number: 5 (lower is better) Translates to: ILITDTNPVGALLII*QEEACYQFSLNSYF Trigger: AAAGTAGCTGTTCAAGGAAAATTGATAGCAAGCTTCTTCTTGCCATATTATGAGGAGAGCCCCAACTGGATTGGTGTCAGTGATAAGGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163839.3 |
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| CDS-3UTR CAA 90 bp | GGGCTTGCAAATAGACCTTTATTATCATTGAGGAAGAGACACACAACCCACTCATCGTCACATAGCAAATaGTTAATGAAGCCGTACAGT | + |
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Preference number: 5 (lower is better) Translates to: GLANRPLLSLRKRHTTHSSSHSK*LMKPYS Trigger: ACTGTACGGCTTCATTAACAATTTGCTATGTGACGA...TGAGTGGGTTGTGTGTCTCTTCCTCAATGATAATAAAGGTCTATTTGCAAGCCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163839.3 |
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| CDS-3UTR CAA 90 bp | GGGCTTGCAAATAGACCTTTATTATCATTGAGGAAGAGACACACAACCCACTCATCATGTAAAACACCTTaGGCAAAATATGTGGGTAGT | + |
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Preference number: 5 (lower is better) Translates to: GLANRPLLSLRKRHTTHSSCKTP*AKYVGS Trigger: ACTACCCACATATTTTGCCAAAGGTGTTTTACATGA...TGAGTGGGTTGTGTGTCTCTTCCTCAATGATAATAAAGGTCTATTTGCAAGCCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163839.3 |
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| CDS-3UTR CAA 90 bp | GGGCTTGCAAATAGACCTTTATTATCATTGAGGAAGAGACACACAACCCACTCAAGAGAAAGAAGTGAGTaGAACAAACAATCACATCCT | + |
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Preference number: 5 (lower is better) Translates to: GLANRPLLSLRKRHTTHSRERSE*NKQSHP Trigger: AGGATGTGATTGTTTGTTCAACTCACTTCTTTCTCT...TGAGTGGGTTGTGTGTCTCTTCCTCAATGATAATAAAGGTCTATTTGCAAGCCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163839.3 |
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| CDS TCA 72 bp | ACTGCTTCCATGTCTCTTTGCCCTGGAGCTGTAGGGTaGCCATGTCACAATAGTGCCATCTCCTCTGACACA | + |
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Preference number: 6 (lower is better) Translates to: TASMSLCPGAVG*PCHNSAISSDT Trigger: TGTGTCAGAGGAGATGGCACTATTGTGACATGGTCACCCTACAGCTCCAGGGCAAAGAGACATGGAAGCAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163839.3 |
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| CDS TCA 72 bp | CCCGGGTCTTGGCGTGTTCTTGCCATATTCGGTAAATaGAGAACTGCTTCCATGTCTCTTTGCCCTGGAGCT | + |
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Preference number: 6 (lower is better) Translates to: PGSWRVLAIFGK*RTASMSLCPGA Trigger: AGCTCCAGGGCAAAGAGACATGGAAGCAGTTCTTCATTTACCGAATATGGCAAGAACACGCCAAGACCCGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163839.3 |
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| CDS CAA 90 bp | GGGGGAAACCACTTCTGGACATCAGGGTTATCCTGTCTTCCCTTCTaGGTGTCCAGAAGGCTCCTTGGCATAAGGAAAATTCGAGAATGG | + |
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Preference number: 6 (lower is better) Translates to: GGNHFWTSGLSCLPF*VSRRLLGIRKIREW Trigger: CCATTCTCGAATTTTCCTTATGCCAAGGAGCCTTCTGGACACCAAGAAGGGAAGACAGGATAACCCTGATGTCCAGAAGTGGTTTCCCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000163839.3 |
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| CDS GCA 72 bp | ATCTCCTCTGACACAATTTCCTCCACAGGACATCACTaGTGGCAAGTGCATTCCAGTTCTTGTTCACTTGGG | + |
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Preference number: 6 (lower is better) Translates to: ISSDTISSTGHH*WQVHSSSCSLG Trigger: CCCAAGTGAACAAGAACTGGAATGCACTTGCCAGCAGTGATGTCCTGTGGAGGAAATTGTGTCAGAGGAGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163839.3 |
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| CDS GCA 72 bp | CACAGGAATTTCCTTGTAAGTGAAATCTTCTGGCTTTaGCCGGGTCTTGGCGTGTTCTTGCCATATTCGGTA | + |
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Preference number: 6 (lower is better) Translates to: HRNFLVSEIFWL*PGLGVFLPYSV Trigger: TACCGAATATGGCAAGAACACGCCAAGACCCGGGCAAAGCCAGAAGATTTCACTTACAAGGAAATTCCTGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163839.3 |
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| CDS CCA 72 bp | ACACTCCACAGGAATTTCCTTGTAAGTGAAATCTTCTaGCTTTGCCCGGGTCTTGGCGTGTTCTTGCCATAT | + |
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Preference number: 6 (lower is better) Translates to: TLHRNFLVSEIF*LCPGLGVFLPY Trigger: ATATGGCAAGAACACGCCAAGACCCGGGCAAAGCCAGAAGATTTCACTTACAAGGAAATTCCTGTGGAGTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163839.3 |
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| CDS CAA 72 bp | CACTTCTGGACATCAGGGTTATCCTGTCTTCCCTTCTaGGTGTCCAGAAGGCTCCTTGGCATAAGGAAAATT | + |
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Preference number: 6 (lower is better) Translates to: HFWTSGLSCLPF*VSRRLLGIRKI Trigger: AATTTTCCTTATGCCAAGGAGCCTTCTGGACACCAAGAAGGGAAGACAGGATAACCCTGATGTCCAGAAGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163839.3 |
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| CDS TCA 72 bp | CATAAAATCCACACTCCACAGGAATTTCCTTGTAAGTaGAATCTTCTGGCTTTGCCCGGGTCTTGGCGTGTT | + |
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Preference number: 6 (lower is better) Translates to: HKIHTPQEFPCK*NLLALPGSWRV Trigger: AACACGCCAAGACCCGGGCAAAGCCAGAAGATTTCACTTACAAGGAAATTCCTGTGGAGTGTGGATTTTATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163839.3 |
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| CDS TCA 72 bp | GACAATTGGGCCATCCTTGGAAATGACAGCTTTCAGTaGTTTACATGGAGATTCCAGGTTGTTAGTCGCCAG | + |
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Preference number: 6 (lower is better) Translates to: DNWAILGNDSFQ*FTWRFQVVSRQ Trigger: CTGGCGACTAACAACCTGGAATCTCCATGTAAATCACTGAAAGCTGTCATTTCCAAGGATGGCCCAATTGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163839.3 |
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| CDS TCA 72 bp | GCAGAGGTCTCTTATTTTGCAGTCGATAACACTTCCTaGGCAACAGGCTTCTCTCCTCCCATGCATATACAT | + |
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Preference number: 6 (lower is better) Translates to: AEVSYFAVDNTS*ATGFSPPMHIH Trigger: ATGTATATGCATGGGAGGAGAGAAGCCTGTTGCTCAGGAAGTGTTATCGACTGCAAAATAAGAGACCTCTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163839.3 |
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| CDS CAA 72 bp | CCCAAGGTATCGCCTACCAAGACAATTGGGCCATCCTaGGAAATGACAGCTTTCAGTGATTTACATGGAGAT | + |
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Preference number: 6 (lower is better) Translates to: PKVSPTKTIGPS*EMTAFSDLHGD Trigger: ATCTCCATGTAAATCACTGAAAGCTGTCATTTCCAAGGATGGCCCAATTGTCTTGGTAGGCGATACCTTGGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163839.3 |
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| CDS CAA 72 bp | GTTAATGAAGCCGTACAGTGGCAGAGGTCTCTTATTTaGCAGTCGATAACACTTCCTGAGCAACAGGCTTCT | + |
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Preference number: 6 (lower is better) Translates to: VNEAVQWQRSLI*QSITLPEQQAS Trigger: AGAAGCCTGTTGCTCAGGAAGTGTTATCGACTGCAAAATAAGAGACCTCTGCCACTGTACGGCTTCATTAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163839.3 |
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| CDS CAA 90 bp | CACCAATCCAGTTGGGGCTCTCCTCATAATATGGCAAGAAGAAGCTaGCTATCAATTTTCCTTGAACAGCTACTTTGTTCCCGATCCCTT | + |
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Preference number: 6 (lower is better) Translates to: HQSSWGSPHNMARRS*LSIFLEQLLCSRSL Trigger: AAGGGATCGGGAACAAAGTAGCTGTTCAAGGAAAATTGATAGCAAGCTTCTTCTTGCCATATTATGAGGAGAGCCCCAACTGGATTGGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163839.3 |
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| CDS TCA 72 bp | TATCGCCTACCAAGACAATTGGGCCATCCTTGGAAATaGCAGCTTTCAGTGATTTACATGGAGATTCCAGGT | + |
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Preference number: 6 (lower is better) Translates to: YRLPRQLGHPWK*QLSVIYMEIPG Trigger: ACCTGGAATCTCCATGTAAATCACTGAAAGCTGTCATTTCCAAGGATGGCCCAATTGTCTTGGTAGGCGATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163839.3 |
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| CDS TCA 72 bp | AGCTTCCCTGTTGTGACAGTCCCACAGTTTGATAGTTaGTTGAATATCTACAGTGACCGCAATGTGCATATC | + |
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Preference number: 6 (lower is better) Translates to: SFPVVTVPQFDS*LNIYSDRNVHI Trigger: GATATGCACATTGCGGTCACTGTAGATATTCAATCAACTATCAAACTGTGGGACTGTCACAACAGGGAAGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163839.3 |
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| CDS GCA 72 bp | GTTGGGGCTCTCCTCATAATATGGCAAGAAGAAGCTTaGTATCAATTTTCCTTGAACAGCTACTTTGTTCCC | + |
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Preference number: 6 (lower is better) Translates to: VGALLIIWQEEA*YQFSLNSYFVP Trigger: GGGAACAAAGTAGCTGTTCAAGGAAAATTGATAGCAAGCTTCTTCTTGCCATATTATGAGGAGAGCCCCAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163839.3 |
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| CDS CCA 72 bp | ACTGACACCAATCCAGTTGGGGCTCTCCTCATAATATaGCAAGAAGAAGCTTGCTATCAATTTTCCTTGAAC | + |
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Preference number: 6 (lower is better) Translates to: TDTNPVGALLII*QEEACYQFSLN Trigger: GTTCAAGGAAAATTGATAGCAAGCTTCTTCTTGCCATATTATGAGGAGAGCCCCAACTGGATTGGTGTCAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163839.3 |
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| CDS TCA 72 bp | TCCCTTCCAGCTTCATATCAAATGTTTCAAACTTTGTaGTTTGGGGGAAACCACTTCTGGACATCAGGGTTA | + |
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Preference number: 6 (lower is better) Translates to: SLPASYQMFQTL*FGGNHFWTSGL Trigger: TAACCCTGATGTCCAGAAGTGGTTTCCCCCAAATCACAAAGTTTGAAACATTTGATATGAAGCTGGAAGGGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000163839.3 |
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| CDS TCA 72 bp | AGAAGTGAGTTGAACAAACAATCACATCCTTATCACTaGCACCAATCCAGTTGGGGCTCTCCTCATAATATG | + |
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Preference number: 6 (lower is better) Translates to: RSELNKQSHPYH*HQSSWGSPHNM Trigger: CATATTATGAGGAGAGCCCCAACTGGATTGGTGTCAGTGATAAGGATGTGATTGTTTGTTCAACTCACTTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163839.3 |
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| CDS CAA 90 bp | GCTCTCCTCATAATATGGCAAGAAGAAGCTTGCTATCAATTTTCCTaGAACAGCTACTTTGTTCCCGATCCCTTCCAGCTTCATATCAAA | + |
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Preference number: 6 (lower is better) Translates to: ALLIIWQEEACYQFS*NSYFVPDPFQLHIK Trigger: TTTGATATGAAGCTGGAAGGGATCGGGAACAAAGTAGCTGTTCAAGGAAAATTGATAGCAAGCTTCTTCTTGCCATATTATGAGGAGAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163839.3 |
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| CDS CAA 72 bp | TTCCAGCTTCATATCAAATGTTTCAAACTTTGTGATTaGGGGGAAACCACTTCTGGACATCAGGGTTATCCT | + |
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Preference number: 6 (lower is better) Translates to: FQLHIKCFKLCD*GETTSGHQGYP Trigger: AGGATAACCCTGATGTCCAGAAGTGGTTTCCCCCAAATCACAAAGTTTGAAACATTTGATATGAAGCTGGAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000163839.3 |
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| CDS CAA 72 bp | ATAATATGGCAAGAAGAAGCTTGCTATCAATTTTCCTaGAACAGCTACTTTGTTCCCGATCCCTTCCAGCTT | + |
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Preference number: 6 (lower is better) Translates to: IIWQEEACYQFS*NSYFVPDPFQL Trigger: AAGCTGGAAGGGATCGGGAACAAAGTAGCTGTTCAAGGAAAATTGATAGCAAGCTTCTTCTTGCCATATTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163839.3 |
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| CDS CAA 72 bp | GAGCAATCAATTTCATCAAAACCATATGGGAATACATaGACTGTGGAAATGAGGTGTAAATCTGGAATCCTA | + |
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Preference number: 6 (lower is better) Translates to: EQSISSKPYGNT*TVEMRCKSGIL Trigger: TAGGATTCCAGATTTACACCTCATTTCCACAGTCAATGTATTCCCATATGGTTTTGATGAAATTGATTGCTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163839.3 |
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