Pregenerated sensors for FBXW21 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000047237Ensembl transcript IDs: ENSMUST00000054925.13, ENSMUST00000198076.5, ENSMUST00000199540.2
Found 67 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCTGGAACTGGAGTTACAGACAGGTGTGAGCGGCCATGTGGATGCTaGGGATGGAACCCAAGTCCTCTGGAAGAGCAGCCAGTGCTCTTA | + |
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Preference number: 1 (lower is better) Translates to: PGTGVTDRCERPCGC*GWNPSPLEEQPVLL Trigger: TAAGAGCACTGGCTGCTCTTCCAGAGGACTTGGGTTCCATCCCCAGCATCCACATGGCCGCTCACACCTGTCTGTAACTCCAGTTCCAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198076.5 |
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| 3UTR TCA 90 bp | TTCTGCAACATTGGTACAGGGTTTGGGTCCTATATCACCACACCATaGTCACTGAAAATATCTTGGATGAAGGCAAGTAAAACTCAAAGG | + |
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Preference number: 1 (lower is better) Translates to: FCNIGTGFGSYITTP*SLKISWMKASKTQR Trigger: CCTTTGAGTTTTACTTGCCTTCATCCAAGATATTTTCAGTGATCATGGTGTGGTGATATAGGACCCAAACCCTGTACCAATGTTGCAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000198076.5 |
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| 3UTR-3UTR TCA 90 bp | CACTCAGAAGAACCCATCCTGCCATTAAAGACAAGATATGAGGAAGCAGTCCCCCTACATAGCAGATGGTaGCCTTGCACTTCTGGACCC | + |
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Preference number: 2 (lower is better) Translates to: HSEEPILPLKTRYEEAVPLHSRW*PCTSGP Trigger: GGGTCCAGAAGTGCAAGGTCACCATCTGCTATGTAG...GGGGACTGCTTCCTCATATCTTGTCTTTAATGGCAGGATGGGTTCTTCTGAGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000198076.5 |
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| 3UTR-3UTR GCA 90 bp | ACCAGCAATCAACATTTGCTTCTGCAACATTGGTACAGGGTTTGGGTCCTATATGAGCGGCCATGTGGATaGTGGGGATGGAACCCAAGT | + |
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Preference number: 2 (lower is better) Translates to: TSNQHLLLQHWYRVWVLYERPCG*WGWNPS Trigger: ACTTGGGTTCCATCCCCAGCATCCACATGGCCGCTC...ATATAGGACCCAAACCCTGTACCAATGTTGCAGAAGCAAATGTTGATTGCTGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198076.5 |
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| 3UTR-3UTR CCA 90 bp | GATGGTTTTGCAATGAACCCAATCTGGCTGCCAAACTTCCTACATAGCAGATGGTGTGGATGCTGGGGATaGAACCCAAGTCCTCTGGAA | + |
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Preference number: 2 (lower is better) Translates to: DGFAMNPIWLPNFLHSRWCGCWG*NPSPLE Trigger: TTCCAGAGGACTTGGGTTCCATCCCCAGCATCCACA...CCATCTGCTATGTAGGAAGTTTGGCAGCCAGATTGGGTTCATTGCAAAACCATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000198076.5 |
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| 3UTR-3UTR CCA 90 bp | TCAAAGGAAAATAAGCCAAATGGAGGTAATAACAGATCACTGATGAAGCAACCCCGGCCATGTGGATGCTaGGGATGGAACCCAAGTCCT | + |
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Preference number: 2 (lower is better) Translates to: SKENKPNGGNNRSLMKQPRPCGC*GWNPSP Trigger: AGGACTTGGGTTCCATCCCCAGCATCCACATGGCCG...GGGTTGCTTCATCAGTGATCTGTTATTACCTCCATTTGGCTTATTTTCCTTTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000198076.5 |
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| 3UTR-3UTR CCA 90 bp | CACTCAGAAGAACCCATCCTGCCATTAAAGACAAGATATGAGGAAGCAGTCCCCGCAATGAACCCAATCTaGCTGCCAAACTTCCTACAT | + |
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Preference number: 2 (lower is better) Translates to: HSEEPILPLKTRYEEAVPAMNPI*LPNFLH Trigger: ATGTAGGAAGTTTGGCAGCCAGATTGGGTTCATTGC...GGGGACTGCTTCCTCATATCTTGTCTTTAATGGCAGGATGGGTTCTTCTGAGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198076.5 |
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| 3UTR-3UTR GCA 90 bp | GTCTTGCTAACCAGCAATCAACATTTGCTTCTGCAACATTGGTACAGGGTTTGGTTGGGAGTAAAGGTGTaGGTTACACTTGGCCAGTTC | + |
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Preference number: 2 (lower is better) Translates to: VLLTSNQHLLLQHWYRVWLGVKV*VTLGQF Trigger: GAACTGGCCAAGTGTAACGCACACCTTTACTCCCAA...CCAAACCCTGTACCAATGTTGCAGAAGCAAATGTTGATTGCTGGTTAGCAAGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198076.5 |
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| 3UTR-3UTR CCA 90 bp | TTTTTCTTTGTTTGTGATGGTTTTGCAATGAACCCAATCTGGCTGCCAAACTTCGTGACCTTGCACTTCTaGACCCTCCTGCCTCTGCTT | + |
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Preference number: 2 (lower is better) Translates to: FFFVCDGFAMNPIWLPNFVTLHF*TLLPLL Trigger: AAGCAGAGGCAGGAGGGTCCAGAAGTGCAAGGTCAC...GAAGTTTGGCAGCCAGATTGGGTTCATTGCAAAACCATCACAAACAAAGAAAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000198076.5 |
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| 3UTR-3UTR GCA 90 bp | TCAAAGGAAAATAAGCCAAATGGAGGTAATAACAGATCACTGATGAAGCAACCCGGACCCTCCTGCCTCTaGTTCTTAAATATTACACAT | + |
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Preference number: 2 (lower is better) Translates to: SKENKPNGGNNRSLMKQPGPSCL*FLNITH Trigger: ATGTGTAATATTTAAGAAGCAGAGGCAGGAGGGTCC...GGGTTGCTTCATCAGTGATCTGTTATTACCTCCATTTGGCTTATTTTCCTTTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198076.5 |
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| 3UTR-3UTR TCA 90 bp | TCAAAGGAAAATAAGCCAAATGGAGGTAATAACAGATCACTGATGAAGCAACCCTTACTTTCAATGCATTaGTGTGAAGGTGTCAGTCAG | + |
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Preference number: 2 (lower is better) Translates to: SKENKPNGGNNRSLMKQPLLSMH*CEGVSQ Trigger: CTGACTGACACCTTCACATCAATGCATTGAAAGTAA...GGGTTGCTTCATCAGTGATCTGTTATTACCTCCATTTGGCTTATTTTCCTTTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198076.5 |
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| 3UTR-3UTR TCA 90 bp | TCAAAGGAAAATAAGCCAAATGGAGGTAATAACAGATCACTGATGAAGCAACCCAATATCTGTTCTGTGTaGTGCTGGAGATCATACATT | + |
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Preference number: 2 (lower is better) Translates to: SKENKPNGGNNRSLMKQPNICSV*CWRSYI Trigger: AATGTATGATCTCCAGCATCACACAGAACAGATATT...GGGTTGCTTCATCAGTGATCTGTTATTACCTCCATTTGGCTTATTTTCCTTTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198076.5 |
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| 3UTR CCA 72 bp | GGAGTTACAGACAGGTGTGAGCGGCCATGTGGATGCTaGGGATGGAACCCAAGTCCTCTGGAAGAGCAGCCA | + |
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Preference number: 3 (lower is better) Translates to: GVTDRCERPCGC*GWNPSPLEEQP Trigger: TGGCTGCTCTTCCAGAGGACTTGGGTTCCATCCCCAGCATCCACATGGCCGCTCACACCTGTCTGTAACTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198076.5 |
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| 3UTR GCA 72 bp | ACTGGAGTTACAGACAGGTGTGAGCGGCCATGTGGATaGTGGGGATGGAACCCAAGTCCTCTGGAAGAGCAG | + |
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Preference number: 3 (lower is better) Translates to: TGVTDRCERPCG*WGWNPSPLEEQ Trigger: CTGCTCTTCCAGAGGACTTGGGTTCCATCCCCAGCATCCACATGGCCGCTCACACCTGTCTGTAACTCCAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198076.5 |
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| 3UTR TCA 72 bp | CCAATCTGGCTGCCAAACTTCCTACATAGCAGATGGTaGCCTTGCACTTCTGGACCCTCCTGCCTCTGCTTC | + |
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Preference number: 3 (lower is better) Translates to: PIWLPNFLHSRW*PCTSGPSCLCF Trigger: GAAGCAGAGGCAGGAGGGTCCAGAAGTGCAAGGTCACCATCTGCTATGTAGGAAGTTTGGCAGCCAGATTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198076.5 |
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| CDS-3UTR TCA 90 bp | CTGGAACTGGAGTTACAGACAGGTGTGAGCGGCCATGTGGATGCTGGGGATGGACATTACATGAGACGATaGCATGAAGGGGGTCCACCC | + |
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Preference number: 4 (lower is better) Translates to: LELELQTGVSGHVDAGDGHYMRR*HEGGPP Trigger: GGGTGGACCCCCTTCATGTCATCGTCTCATGTAATG...TCCATCCCCAGCATCCACATGGCCGCTCACACCTGTCTGTAACTCCAGTTCCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000198076.5 |
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| CDS-3UTR GCA 90 bp | CTGGAACTGGAGTTACAGACAGGTGTGAGCGGCCATGTGGATGCTGGGGATGGAGCTTCTCTCCTCCCATaGGTACACATCCAAAAAGCC | + |
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Preference number: 4 (lower is better) Translates to: LELELQTGVSGHVDAGDGASLLP*VHIQKA Trigger: GGCTTTTTGGATGTGTACGCATGGGAGGAGAGAAGC...TCCATCCCCAGCATCCACATGGCCGCTCACACCTGTCTGTAACTCCAGTTCCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000198076.5 |
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| CDS-3UTR CCA 90 bp | CTGGAACTGGAGTTACAGACAGGTGTGAGCGGCCATGTGGATGCTGGGGATGGACACTTATTGAGCTGTTaGCTTCTCTCCTCCCATGCG | + |
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Preference number: 4 (lower is better) Translates to: LELELQTGVSGHVDAGDGHLLSC*LLSSHA Trigger: CGCATGGGAGGAGAGAAGCCAACAGCTCAATAAGTG...TCCATCCCCAGCATCCACATGGCCGCTCACACCTGTCTGTAACTCCAGTTCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198076.5 |
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| CDS-3UTR TCA 90 bp | CTGGAACTGGAGTTACAGACAGGTGTGAGCGGCCATGTGGATGCTGGGGATGGAGCCATGTTCGGTAAATaGAGAACTCCTTCCATGTCT | + |
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Preference number: 4 (lower is better) Translates to: LELELQTGVSGHVDAGDGAMFGK*RTPSMS Trigger: AGACATGGAAGGAGTTCTTCATTTACCGAACATGGC...TCCATCCCCAGCATCCACATGGCCGCTCACACCTGTCTGTAACTCCAGTTCCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198076.5 |
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| CDS-3UTR TCA 90 bp | GATGGTTTTGCAATGAACCCAATCTGGCTGCCAAACTTCCTACATAGCAGATGGCCAGGAGCTGTTGGGTaGCCATGTTACAGTAGAACC | + |
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Preference number: 4 (lower is better) Translates to: DGFAMNPIWLPNFLHSRWPGAVG*PCYSRT Trigger: GGTTCTACTGTAACATGGTCACCCAACAGCTCCTGG...CCATCTGCTATGTAGGAAGTTTGGCAGCCAGATTGGGTTCATTGCAAAACCATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198076.5 |
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| CDS-3UTR CCA 90 bp | CTGGAACTGGAGTTACAGACAGGTGTGAGCGGCCATGTGGATGCTGGGGATGGATTCACTAATACCGTATaGGAATACTTTGAGTCTGGT | + |
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Preference number: 4 (lower is better) Translates to: LELELQTGVSGHVDAGDGFTNTV*EYFESG Trigger: ACCAGACTCAAAGTATTCCCATACGGTATTAGTGAA...TCCATCCCCAGCATCCACATGGCCGCTCACACCTGTCTGTAACTCCAGTTCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198076.5 |
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| CDS-3UTR TCA 90 bp | CACTCAGAAGAACCCATCCTGCCATTAAAGACAAGATATGAGGAAGCAGTCCCCGCCGATAACACTTATTaGGCTGTTGGCTTCTCTCCT | + |
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Preference number: 4 (lower is better) Translates to: HSEEPILPLKTRYEEAVPADNTY*AVGFSP Trigger: AGGAGAGAAGCCAACAGCTCAATAAGTGTTATCGGC...GGGGACTGCTTCCTCATATCTTGTCTTTAATGGCAGGATGGGTTCTTCTGAGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198076.5 |
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| CDS-3UTR TCA 90 bp | GTCTTGCTAACCAGCAATCAACATTTGCTTCTGCAACATTGGTACAGGGTTTGGACAGCTTTCAGTGACTaGCAGGGAGAAATCAGGCTG | + |
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Preference number: 4 (lower is better) Translates to: VLLTSNQHLLLQHWYRVWTAFSD*QGEIRL Trigger: CAGCCTGATTTCTCCCTGTCAGTCACTGAAAGCTGT...CCAAACCCTGTACCAATGTTGCAGAAGCAAATGTTGATTGCTGGTTAGCAAGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198076.5 |
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| CDS-3UTR TCA 90 bp | CACTCAGAAGAACCCATCCTGCCATTAAAGACAAGATATGAGGAAGCAGTCCCCAATGCTTGCAGACAGTaGCCATTTATGTCGAAGAGC | + |
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Preference number: 4 (lower is better) Translates to: HSEEPILPLKTRYEEAVPNACRQ*PFMSKS Trigger: GCTCTTCGACATAAATGGTCACTGTCTGCAAGCATT...GGGGACTGCTTCCTCATATCTTGTCTTTAATGGCAGGATGGGTTCTTCTGAGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198076.5 |
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| CDS-3UTR TCA 90 bp | GTCTTGCTAACCAGCAATCAACATTTGCTTCTGCAACATTGGTACAGGGTTTGGAATGACAGCTTTCAGTaGCTGACAGGGAGAAATCAG | + |
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Preference number: 4 (lower is better) Translates to: VLLTSNQHLLLQHWYRVWNDSFQ*LTGRNQ Trigger: CTGATTTCTCCCTGTCAGTCACTGAAAGCTGTCATT...CCAAACCCTGTACCAATGTTGCAGAAGCAAATGTTGATTGCTGGTTAGCAAGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198076.5 |
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| 3UTR CAA 72 bp | CTTGCTAACCAGCAATCAACATTTGCTTCTGCAACATaGGTACAGGGTTTGGGTCCTATATCACCACACCAT | + |
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Preference number: 4 (lower is better) Translates to: LANQQSTFASAT*VQGLGPISPHH Trigger: ATGGTGTGGTGATATAGGACCCAAACCCTGTACCAATGTTGCAGAAGCAAATGTTGATTGCTGGTTAGCAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198076.5 |
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| 3UTR CAA 72 bp | TGGGTTAAAGGTGTCTTGCTAACCAGCAATCAACATTaGCTTCTGCAACATTGGTACAGGGTTTGGGTCCTA | + |
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Preference number: 4 (lower is better) Translates to: WVKGVLLTSNQH*LLQHWYRVWVL Trigger: TAGGACCCAAACCCTGTACCAATGTTGCAGAAGCAAATGTTGATTGCTGGTTAGCAAGACACCTTTAACCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198076.5 |
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| CDS-3UTR TCA 90 bp | GATGGTTTTGCAATGAACCCAATCTGGCTGCCAAACTTCCTACATAGCAGATGGCTCATAGTTCTGCAATaGGAAGCTTGCAAAGAAATG | + |
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Preference number: 4 (lower is better) Translates to: DGFAMNPIWLPNFLHSRWLIVLQ*EACKEM Trigger: CATTTCTTTGCAAGCTTCTCATTGCAGAACTATGAG...CCATCTGCTATGTAGGAAGTTTGGCAGCCAGATTGGGTTCATTGCAAAACCATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198076.5 |
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| CDS-3UTR CCA 90 bp | ACCAGCAATCAACATTTGCTTCTGCAACATTGGTACAGGGTTTGGGTCCTATATAACTCCATACCATTCTaGTCTCTCCTCATAGTTCTG | + |
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Preference number: 4 (lower is better) Translates to: TSNQHLLLQHWYRVWVLYNSIPF*SLLIVL Trigger: CAGAACTATGAGGAGAGACCAGAATGGTATGGAGTT...ATATAGGACCCAAACCCTGTACCAATGTTGCAGAAGCAAATGTTGATTGCTGGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198076.5 |
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| CDS-3UTR GCA 90 bp | TCAAAGGAAAATAAGCCAAATGGAGGTAATAACAGATCACTGATGAAGCAACCCTGGGCAGTACTGAAATaGTTGCAGACAGTGACCATT | + |
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Preference number: 4 (lower is better) Translates to: SKENKPNGGNNRSLMKQPWAVLK*LQTVTI Trigger: AATGGTCACTGTCTGCAAGCATTTCAGTACTGCCCA...GGGTTGCTTCATCAGTGATCTGTTATTACCTCCATTTGGCTTATTTTCCTTTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198076.5 |
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| CDS-3UTR CCA 90 bp | TTTTTCTTTGTTTGTGATGGTTTTGCAATGAACCCAATCTGGCTGCCAAACTTCTCTCAAGATCTGTTCTaGGCAGTACTGAAATGCTTG | + |
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Preference number: 4 (lower is better) Translates to: FFFVCDGFAMNPIWLPNFSQDLF*AVLKCL Trigger: CAAGCATTTCAGTACTGCCCAGAACAGATCTTGAGA...GAAGTTTGGCAGCCAGATTGGGTTCATTGCAAAACCATCACAAACAAAGAAAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000198076.5 |
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| CDS-3UTR TCA 90 bp | TTTTTCTTTGTTTGTGATGGTTTTGCAATGAACCCAATCTGGCTGCCAAACTTCGAATTTCCTTGTAAATaGAATCTTCTGGCTTTGCCC | + |
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Preference number: 4 (lower is better) Translates to: FFFVCDGFAMNPIWLPNFEFPCK*NLLALP Trigger: GGGCAAAGCCAGAAGATTTCATTTACAAGGAAATTC...GAAGTTTGGCAGCCAGATTGGGTTCATTGCAAAACCATCACAAACAAAGAAAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000198076.5 |
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| CDS-3UTR TCA 90 bp | TCAAAGGAAAATAAGCCAAATGGAGGTAATAACAGATCACTGATGAAGCAACCCGAGAGAGAATCTAGTTaGACAAACAATCACATCCTT | + |
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Preference number: 4 (lower is better) Translates to: SKENKPNGGNNRSLMKQPERESS*TNNHIL Trigger: AAGGATGTGATTGTTTGTTCAACTAGATTCTCTCTC...GGGTTGCTTCATCAGTGATCTGTTATTACCTCCATTTGGCTTATTTTCCTTTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198076.5 |
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| CDS-3UTR GCA 90 bp | TTTTTCTTTGTTTGTGATGGTTTTGCAATGAACCCAATCTGGCTGCCAAACTTCGATATAACATGCATATaGCTGAATTCCATACTCTGC | + |
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Preference number: 4 (lower is better) Translates to: FFFVCDGFAMNPIWLPNFDITCI*LNSILC Trigger: GCAGAGTATGGAATTCAGGCATATGCATGTTATATC...GAAGTTTGGCAGCCAGATTGGGTTCATTGCAAAACCATCACAAACAAAGAAAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000198076.5 |
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| CDS-3UTR CAA 90 bp | CTGGAACTGGAGTTACAGACAGGTGTGAGCGGCCATGTGGATGCTGGGGATGGAGGCTTTGCCCGGGACTaGGCATGTTCTTGCCATGTT | + |
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Preference number: 5 (lower is better) Translates to: LELELQTGVSGHVDAGDGGFARD*ACSCHV Trigger: AACATGGCAAGAACATGCCAAGTCCCGGGCAAAGCC...TCCATCCCCAGCATCCACATGGCCGCTCACACCTGTCTGTAACTCCAGTTCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198076.5 |
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| CDS-3UTR CAA 90 bp | CTGGAACTGGAGTTACAGACAGGTGTGAGCGGCCATGTGGATGCTGGGGATGGAGGACTTGGCATGTTCTaGCCATGTTCGGTAAATGAA | + |
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Preference number: 5 (lower is better) Translates to: LELELQTGVSGHVDAGDGGLGMF*PCSVNE Trigger: TTCATTTACCGAACATGGCAAGAACATGCCAAGTCC...TCCATCCCCAGCATCCACATGGCCGCTCACACCTGTCTGTAACTCCAGTTCCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198076.5 |
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| CDS TCA 90 bp | ATCAAGACAATTGGGCCATCCTTGGTAATGACAGCTTTCAGTGACTaGCAGGGAGAAATCAGGCTGTTAGTTGCCAGAGCTTCACTGTTG | + |
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Preference number: 5 (lower is better) Translates to: IKTIGPSLVMTAFSD*QGEIRLLVARASLL Trigger: CAACAGTGAAGCTCTGGCAACTAACAGCCTGATTTCTCCCTGTCAGTCACTGAAAGCTGTCATTACCAAGGATGGCCCAATTGTCTTGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054925.13 ENSMUST00000198076.5 |
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| CDS TCA 90 bp | ACCTATCAAGACAATTGGGCCATCCTTGGTAATGACAGCTTTCAGTaGCTGACAGGGAGAAATCAGGCTGTTAGTTGCCAGAGCTTCACT | + |
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Preference number: 5 (lower is better) Translates to: TYQDNWAILGNDSFQ*LTGRNQAVSCQSFT Trigger: AGTGAAGCTCTGGCAACTAACAGCCTGATTTCTCCCTGTCAGTCACTGAAAGCTGTCATTACCAAGGATGGCCCAATTGTCTTGATAGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054925.13 ENSMUST00000198076.5 |
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| CDS GCA 90 bp | AGTAGAACCATCTCTTTTGACACAACTTCCTCCATAGGACATCACTaGTTGCAAGTTCATTCCAGTTCTTGTTCACTTGGGCAACCTGTA | + |
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Preference number: 5 (lower is better) Translates to: SRTISFDTTSSIGHH*LQVHSSSCSLGQPV Trigger: TACAGGTTGCCCAAGTGAACAAGAACTGGAATGAACTTGCAAGCAGTGATGTCCTATGGAGGAAGTTGTGTCAAAAGAGATGGTTCTACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054925.13 ENSMUST00000198076.5 ENSMUST00000199540.2 |
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| CDS-3UTR CAA 90 bp | GTCTTGCTAACCAGCAATCAACATTTGCTTCTGCAACATTGGTACAGGGTTTGGGGAATCCTAAAGATGTaGAGGTTACCCAAGGTATCA | + |
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Preference number: 5 (lower is better) Translates to: VLLTSNQHLLLQHWYRVWGILKM*RLPKVS Trigger: TGATACCTTGGGTAACCTCAACATCTTTAGGATTCC...CCAAACCCTGTACCAATGTTGCAGAAGCAAATGTTGATTGCTGGTTAGCAAGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198076.5 |
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| CDS-3UTR CAA 90 bp | TTTTTCTTTGTTTGTGATGGTTTTGCAATGAACCCAATCTGGCTGCCAAACTTCACAATTGGGCCATCCTaGGTAATGACAGCTTTCAGT | + |
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Preference number: 5 (lower is better) Translates to: FFFVCDGFAMNPIWLPNFTIGPS*VMTAFS Trigger: ACTGAAAGCTGTCATTACCAAGGATGGCCCAATTGT...GAAGTTTGGCAGCCAGATTGGGTTCATTGCAAAACCATCACAAACAAAGAAAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000198076.5 |
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| CDS-3UTR CAA 90 bp | GTCTTGCTAACCAGCAATCAACATTTGCTTCTGCAACATTGGTACAGGGTTTGGTCTTTAACAGTTATTTaGTTCCCGATCTTTTCCAGC | + |
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Preference number: 5 (lower is better) Translates to: VLLTSNQHLLLQHWYRVWSLTVI*FPIFSS Trigger: GCTGGAAAAGATCGGGAACAAAATAACTGTTAAAGA...CCAAACCCTGTACCAATGTTGCAGAAGCAAATGTTGATTGCTGGTTAGCAAGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198076.5 |
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| CDS-3UTR CAA 90 bp | TTTTTCTTTGTTTGTGATGGTTTTGCAATGAACCCAATCTGGCTGCCAAACTTCGCAGTACTGAAATGCTaGCAGACAGTGACCATTTAT | + |
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Preference number: 5 (lower is better) Translates to: FFFVCDGFAMNPIWLPNFAVLKC*QTVTIY Trigger: ATAAATGGTCACTGTCTGCAAGCATTTCAGTACTGC...GAAGTTTGGCAGCCAGATTGGGTTCATTGCAAAACCATCACAAACAAAGAAAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000198076.5 |
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| CDS TCA 90 bp | ATCACTAACTCCATACCATTCTGGTCTCTCCTCATAGTTCTGCAATaGGAAGCTTGCAAAGAAATGCTCTTTAACAGTTATTTTGTTCCC | + |
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Preference number: 5 (lower is better) Translates to: ITNSIPFWSLLIVLQ*EACKEMLFNSYFVP Trigger: GGGAACAAAATAACTGTTAAAGAGCATTTCTTTGCAAGCTTCTCATTGCAGAACTATGAGGAGAGACCAGAATGGTATGGAGTTAGTGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054925.13 ENSMUST00000198076.5 |
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| CDS TCA 90 bp | ATAAATGCCATCAGAAAGCAGGGGGTGGTTCGAATTGTTATCACTTaGATTATGCTTACATCATCACTTAGTGTTTTGTTAATGAGGCCA | + |
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Preference number: 5 (lower is better) Translates to: INAIRKQGVVRIVIT*IMLTSSLSVLLMRP Trigger: TGGCCTCATTAACAAAACACTAAGTGATGATGTAAGCATAATTCAAGTGATAACAATTCGAACCACCCCCTGCTTTCTGATGGCATTTAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054925.13 |
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| CDS CAA 72 bp | ACTGCAATGTACATCTCAGGGAGGGTAGTCAACAGCTaGATACTTGCCGGCTGTTCTGGGCTTACCCAGGTC | + |
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Preference number: 6 (lower is better) Translates to: TAMYISGRVVNS*ILAGCSGLTQV Trigger: GACCTGGGTAAGCCCAGAACAGCCGGCAAGTATCAAGCTGTTGACTACCCTCCCTGAGATGTACATTGCAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054925.13 ENSMUST00000198076.5 |
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| CDS CCA 72 bp | GAGGGTAGTCAACAGCTTGATACTTGCCGGCTGTTCTaGGCTTACCCAGGTCAAAACACCCTCGTGAATATC | + |
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Preference number: 6 (lower is better) Translates to: EGSQQLDTCRLF*AYPGQNTLVNI Trigger: GATATTCACGAGGGTGTTTTGACCTGGGTAAGCCCAGAACAGCCGGCAAGTATCAAGCTGTTGACTACCCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054925.13 ENSMUST00000198076.5 |
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| CDS TCA 72 bp | CCCGGGACTTGGCATGTTCTTGCCATGTTCGGTAAATaGAGAACTCCTTCCATGTCTCTTTACCCAGGAGCT | + |
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Preference number: 6 (lower is better) Translates to: PGTWHVLAMFGK*RTPSMSLYPGA Trigger: AGCTCCTGGGTAAAGAGACATGGAAGGAGTTCTTCATTTACCGAACATGGCAAGAACATGCCAAGTCCCGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054925.13 ENSMUST00000198076.5 ENSMUST00000199540.2 |
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| CDS TCA 72 bp | ATTGGGCCATCCTTGGTAATGACAGCTTTCAGTGACTaGCAGGGAGAAATCAGGCTGTTAGTTGCCAGAGCT | + |
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Preference number: 6 (lower is better) Translates to: IGPSLVMTAFSD*QGEIRLLVARA Trigger: AGCTCTGGCAACTAACAGCCTGATTTCTCCCTGTCAGTCACTGAAAGCTGTCATTACCAAGGATGGCCCAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054925.13 ENSMUST00000198076.5 |
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| CDS TCA 72 bp | GACAATTGGGCCATCCTTGGTAATGACAGCTTTCAGTaGCTGACAGGGAGAAATCAGGCTGTTAGTTGCCAG | + |
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Preference number: 6 (lower is better) Translates to: DNWAILGNDSFQ*LTGRNQAVSCQ Trigger: CTGGCAACTAACAGCCTGATTTCTCCCTGTCAGTCACTGAAAGCTGTCATTACCAAGGATGGCCCAATTGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054925.13 ENSMUST00000198076.5 |
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| CDS CAA 90 bp | TCTTCCCTTCTTGGAGTCCAGAAGGCTCTTTGGCACAATGAAAATTaGAGATCGGTAGACACAGGGGCAGAGAATTCTGATGTCCTCAGT | + |
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Preference number: 6 (lower is better) Translates to: SSLLGVQKALWHNEN*RSVDTGAENSDVLS Trigger: ACTGAGGACATCAGAATTCTCTGCCCCTGTGTCTACCGATCTCAAATTTTCATTGTGCCAAAGAGCCTTCTGGACTCCAAGAAGGGAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054925.13 ENSMUST00000198076.5 |
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| CDS TCA 72 bp | ACTCCTTCCATGTCTCTTTACCCAGGAGCTGTTGGGTaGCCATGTTACAGTAGAACCATCTCTTTTGACACA | + |
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Preference number: 6 (lower is better) Translates to: TPSMSLYPGAVG*PCYSRTISFDT Trigger: TGTGTCAAAAGAGATGGTTCTACTGTAACATGGTCACCCAACAGCTCCTGGGTAAAGAGACATGGAAGGAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054925.13 ENSMUST00000198076.5 ENSMUST00000199540.2 |
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| CDS TCA 72 bp | GCAGATGTTTACTGTATTGCAGCCGATAACACTTATTaGGCTGTTGGCTTCTCTCCTCCCATGCGTACACAT | + |
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Preference number: 6 (lower is better) Translates to: ADVYCIAADNTY*AVGFSPPMRTH Trigger: ATGTGTACGCATGGGAGGAGAGAAGCCAACAGCTCAATAAGTGTTATCGGCTGCAATACAGTAAACATCTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054925.13 ENSMUST00000198076.5 |
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| CDS GCA 72 bp | TGCAGGAATTTCCTTGTAAATGAAATCTTCTGGCTTTaGCCGGGACTTGGCATGTTCTTGCCATGTTCGGTA | + |
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Preference number: 6 (lower is better) Translates to: CRNFLVNEIFWL*PGLGMFLPCSV Trigger: TACCGAACATGGCAAGAACATGCCAAGTCCCGGGCAAAGCCAGAAGATTTCATTTACAAGGAAATTCCTGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054925.13 ENSMUST00000198076.5 ENSMUST00000199540.2 |
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| CDS CAA 72 bp | GAAGAACTCCTTCCATGTCTCTTTACCCAGGAGCTGTaGGGTGACCATGTTACAGTAGAACCATCTCTTTTG | + |
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Preference number: 6 (lower is better) Translates to: EELLPCLFTQEL*GDHVTVEPSLL Trigger: CAAAAGAGATGGTTCTACTGTAACATGGTCACCCAACAGCTCCTGGGTAAAGAGACATGGAAGGAGTTCTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054925.13 ENSMUST00000198076.5 ENSMUST00000199540.2 |
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| CDS CAA 72 bp | CTTGGAGTCCAGAAGGCTCTTTGGCACAATGAAAATTaGAGATCGGTAGACACAGGGGCAGAGAATTCTGAT | + |
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Preference number: 6 (lower is better) Translates to: LGVQKALWHNEN*RSVDTGAENSD Trigger: ATCAGAATTCTCTGCCCCTGTGTCTACCGATCTCAAATTTTCATTGTGCCAAAGAGCCTTCTGGACTCCAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054925.13 ENSMUST00000198076.5 |
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| CDS CAA 90 bp | CTTGTAAATGAAATCTTCTGGCTTTGCCCGGGACTTGGCATGTTCTaGCCATGTTCGGTAAATGAAGAACTCCTTCCATGTCTCTTTACC | + |
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Preference number: 6 (lower is better) Translates to: LVNEIFWLCPGLGMF*PCSVNEELLPCLFT Trigger: GGTAAAGAGACATGGAAGGAGTTCTTCATTTACCGAACATGGCAAGAACATGCCAAGTCCCGGGCAAAGCCAGAAGATTTCATTTACAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054925.13 ENSMUST00000198076.5 ENSMUST00000199540.2 |
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| CDS CAA 90 bp | TGGCAGATGTTTACTGTATTGCAGCCGATAACACTTATTGAGCTGTaGGCTTCTCTCCTCCCATGCGTACACATCCAAAAAGCCATCATT | + |
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Preference number: 6 (lower is better) Translates to: WQMFTVLQPITLIEL*ASLLPCVHIQKAII Trigger: AATGATGGCTTTTTGGATGTGTACGCATGGGAGGAGAGAAGCCAACAGCTCAATAAGTGTTATCGGCTGCAATACAGTAAACATCTGCCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000054925.13 ENSMUST00000198076.5 |
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| CDS TCA 72 bp | CAAAACACCCATACTCTGCAGGAATTTCCTTGTAAATaGAATCTTCTGGCTTTGCCCGGGACTTGGCATGTT | + |
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Preference number: 6 (lower is better) Translates to: QNTHTLQEFPCK*NLLALPGTWHV Trigger: AACATGCCAAGTCCCGGGCAAAGCCAGAAGATTTCATTTACAAGGAAATTCCTGCAGAGTATGGGTGTTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199540.2 |
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| CDS CAA 72 bp | CATGTATGGACATCAGGGTTATCCTGTCTTCCCTTCTaGGAGTCCAGAAGGCTCTTTGGCACAATGAAAATT | + |
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Preference number: 6 (lower is better) Translates to: HVWTSGLSCLPF*ESRRLFGTMKI Trigger: AATTTTCATTGTGCCAAAGAGCCTTCTGGACTCCAAGAAGGGAAGACAGGATAACCCTGATGTCCATACATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054925.13 ENSMUST00000198076.5 |
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| CDS CAA 90 bp | TCGGTAAATGAAGAACTCCTTCCATGTCTCTTTACCCAGGAGCTGTaGGGTGACCATGTTACAGTAGAACCATCTCTTTTGACACAACTT | + |
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Preference number: 6 (lower is better) Translates to: SVNEELLPCLFTQEL*GDHVTVEPSLLTQL Trigger: AAGTTGTGTCAAAAGAGATGGTTCTACTGTAACATGGTCACCCAACAGCTCCTGGGTAAAGAGACATGGAAGGAGTTCTTCATTTACCGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054925.13 ENSMUST00000198076.5 ENSMUST00000199540.2 |
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| CDS TCA 72 bp | GAAATCAGGCTGTTAGTTGCCAGAGCTTCACTGTTGTaGCAGTCCCACAGTTTGATAGTTGATTCCATATCT | + |
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Preference number: 6 (lower is better) Translates to: EIRLLVARASLL*QSHSLIVDSIS Trigger: AGATATGGAATCAACTATCAAACTGTGGGACTGTCACAACAGTGAAGCTCTGGCAACTAACAGCCTGATTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054925.13 ENSMUST00000198076.5 |
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| CDS GCA 72 bp | ATCTCTTTTGACACAACTTCCTCCATAGGACATCACTaGTTGCAAGTTCATTCCAGTTCTTGTTCACTTGGG | + |
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Preference number: 6 (lower is better) Translates to: ISFDTTSSIGHH*LQVHSSSCSLG Trigger: CCCAAGTGAACAAGAACTGGAATGAACTTGCAAGCAGTGATGTCCTATGGAGGAAGTTGTGTCAAAAGAGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054925.13 ENSMUST00000198076.5 ENSMUST00000199540.2 |
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| CDS CAA 72 bp | TTTACTGTATTGCAGCCGATAACACTTATTGAGCTGTaGGCTTCTCTCCTCCCATGCGTACACATCCAAAAA | + |
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Preference number: 6 (lower is better) Translates to: FTVLQPITLIEL*ASLLPCVHIQK Trigger: TTTTTGGATGTGTACGCATGGGAGGAGAGAAGCCAACAGCTCAATAAGTGTTATCGGCTGCAATACAGTAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054925.13 ENSMUST00000198076.5 |
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| CDS TCA 72 bp | AGCTTCACTGTTGTGACAGTCCCACAGTTTGATAGTTaGTTCCATATCTACAGTGACTGCAATGTACATCTC | + |
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Preference number: 6 (lower is better) Translates to: SFTVVTVPQFDS*FHIYSDCNVHL Trigger: GAGATGTACATTGCAGTCACTGTAGATATGGAATCAACTATCAAACTGTGGGACTGTCACAACAGTGAAGCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054925.13 ENSMUST00000198076.5 |
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| CDS TCA 72 bp | TCCATACCATTCTGGTCTCTCCTCATAGTTCTGCAATaGGAAGCTTGCAAAGAAATGCTCTTTAACAGTTAT | + |
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Preference number: 6 (lower is better) Translates to: SIPFWSLLIVLQ*EACKEMLFNSY Trigger: ATAACTGTTAAAGAGCATTTCTTTGCAAGCTTCTCATTGCAGAACTATGAGGAGAGACCAGAATGGTATGGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054925.13 ENSMUST00000198076.5 |
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| CDS CAA 72 bp | GAGAAGCTTGCAAAGAAATGCTCTTTAACAGTTATTTaGTTCCCGATCTTTTCCAGCTCCATATCAAATGTG | + |
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Preference number: 6 (lower is better) Translates to: EKLAKKCSLTVI*FPIFSSSISNV Trigger: CACATTTGATATGGAGCTGGAAAAGATCGGGAACAAAATAACTGTTAAAGAGCATTTCTTTGCAAGCTTCTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054925.13 ENSMUST00000198076.5 |
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