Pregenerated sensors for FBXW2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000035949Ensembl transcript IDs: ENSMUST00000028220.10, ENSMUST00000091020.10, ENSMUST00000113075.8, ENSMUST00000113077.8, ENSMUST00000113078.8, ENSMUST00000113080.9
Found 142 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AAAATCAGTCACAGCTTTCATAGGGTGGCAGTTCCCAAATACCAATaGCCAAGACACAAAATGGGAGACCTAATGCAATATATGCACCAA | + |
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Preference number: 1 (lower is better) Translates to: KISHSFHRVAVPKYQ*PRHKMGDLMQYMHQ Trigger: TTGGTGCATATATTGCATTAGGTCTCCCATTTTGTGTCTTGGTCATTGGTATTTGGGAACTGCCACCCTATGAAAGCTGTGACTGATTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113075.8 |
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| 3UTR TCA 90 bp | AAAAATGCAACCTCTCTTACACTGACCAACATAACTAAGTACAAATaGAGTCAATGGTGTATCCCATTAGCATGCTGCGGTGTATGTCAG | + |
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Preference number: 1 (lower is better) Translates to: KNATSLTLTNITKYK*SQWCIPLACCGVCQ Trigger: CTGACATACACCGCAGCATGCTAATGGGATACACCATTGACTTCATTTGTACTTAGTTATGTTGGTCAGTGTAAGAGAGGTTGCATTTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000028220.10 ENSMUST00000091020.10 ENSMUST00000113077.8 ENSMUST00000113078.8 ENSMUST00000113080.9 |
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| 3UTR CCA 90 bp | TCTATTAACAATGGATTCATAGGTTTTAGAAACAACTGGCTAAGTTaGAAAATCAGTCACAGCTTTCATAGGGTGGCAGTTCCCAAATAC | + |
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Preference number: 1 (lower is better) Translates to: SINNGFIGFRNNWLS*KISHSFHRVAVPKY Trigger: GTATTTGGGAACTGCCACCCTATGAAAGCTGTGACTGATTTTCCAACTTAGCCAGTTGTTTCTAAAACCTATGAATCCATTGTTAATAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113075.8 |
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| 3UTR-3UTR GCA 90 bp | ATGAAGTCAATGGTGTATCCCATTAGCATGCTGCGGTGTATGTCAGTAAACAAGGGCTGCCATAGACATTaGACCCAAAACCCGCAGCCC | + |
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Preference number: 2 (lower is better) Translates to: MKSMVYPISMLRCMSVNKGCHRH*TQNPQP Trigger: GGGCTGCGGGTTTTGGGTGCAATGTCTATGGCAGCC...CTTGTTTACTGACATACACCGCAGCATGCTAATGGGATACACCATTGACTTCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028220.10 ENSMUST00000091020.10 ENSMUST00000113077.8 ENSMUST00000113078.8 ENSMUST00000113080.9 |
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| 3UTR-3UTR TCA 90 bp | AGCTTCCCTGTGTCAAGCACCAGATTGACAGGACAAGTCAGATGTTGTCTGGAGGGTGTCACTACAAAATaGGGAAGATTGAGAACCTCT | + |
|
Preference number: 2 (lower is better) Translates to: SFPVSSTRLTGQVRCCLEGVTTK*GRLRTS Trigger: AGAGGTTCTCAATCTTCCTCATTTTGTAGTGACACC...CTCCAGACAACATCTGACTTGTCCTGTCAATCTGGTGCTTGACACAGGGAAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113075.8 |
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| 3UTR-3UTR GCA 90 bp | ATGAAGTCAATGGTGTATCCCATTAGCATGCTGCGGTGTATGTCAGTAAACAAGGTTCATGCAGTTGGCTaGCATAGACATTGCACCCAA | + |
|
Preference number: 2 (lower is better) Translates to: MKSMVYPISMLRCMSVNKVHAVG*HRHCTQ Trigger: TTGGGTGCAATGTCTATGGCAGCCAACTGCATGAAC...CTTGTTTACTGACATACACCGCAGCATGCTAATGGGATACACCATTGACTTCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000028220.10 ENSMUST00000091020.10 ENSMUST00000113077.8 ENSMUST00000113078.8 ENSMUST00000113080.9 |
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| 3UTR CAA 90 bp | AAGAAAAACAAAAATCAAAGCAGCTTCCCTGTGTCAAGCACCAGATaGACAGGACAAGTCAGATGTTGTCTGGAGTCTACACTTTCCCAC | + |
|
Preference number: 2 (lower is better) Translates to: KKNKNQSSFPVSSTR*TGQVRCCLESTLSH Trigger: GTGGGAAAGTGTAGACTCCAGACAACATCTGACTTGTCCTGTCAATCTGGTGCTTGACACAGGGAAGCTGCTTTGATTTTTGTTTTTCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000113075.8 |
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| 3UTR-3UTR GCA 90 bp | ACTCAATATTCCACTCAGAAAGATAAATCCAAAAATGCAACCTCTCTTACACTGGTTCATGCAGTTGGCTaGCATAGACATTGCACCCAA | + |
|
Preference number: 2 (lower is better) Translates to: TQYSTQKDKSKNATSLTLVHAVG*HRHCTQ Trigger: TTGGGTGCAATGTCTATGGCAGCCAACTGCATGAAC...CAGTGTAAGAGAGGTTGCATTTTTGGATTTATCTTTCTGAGTGGAATATTGAGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000028220.10 ENSMUST00000091020.10 ENSMUST00000113077.8 ENSMUST00000113078.8 ENSMUST00000113080.9 |
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| 3UTR CCA 72 bp | GAAACTGACACCCAGGCAGGAGTTCACAGAATCTGTTaGTTAGGGGTGAAAACCAGAATGAAGCCTGATTCA | + |
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Preference number: 3 (lower is better) Translates to: ETDTQAGVHRIC*LGVKTRMKPDS Trigger: TGAATCAGGCTTCATTCTGGTTTTCACCCCTAACCAACAGATTCTGTGAACTCCTGCCTGGGTGTCAGTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113075.8 |
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| 3UTR TCA 72 bp | AAAATCAAAGCAGCTTCCCTGTGTCAAGCACCAGATTaGCAGGACAAGTCAGATGTTGTCTGGAGTCTACAC | + |
|
Preference number: 3 (lower is better) Translates to: KIKAASLCQAPD*QDKSDVVWSLH Trigger: GTGTAGACTCCAGACAACATCTGACTTGTCCTGTCAATCTGGTGCTTGACACAGGGAAGCTGCTTTGATTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113075.8 |
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| 3UTR TCA 72 bp | TGGTGTCACTACAAAATGAGGAAGATTGAGAACCTCTaGGCTAGAGTAAGCAAAACAGAATGTCAGGAAGGG | + |
|
Preference number: 3 (lower is better) Translates to: WCHYKMRKIENL*ARVSKTECQEG Trigger: CCCTTCCTGACATTCTGTTTTGCTTACTCTAGCTCAGAGGTTCTCAATCTTCCTCATTTTGTAGTGACACCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113075.8 |
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| 3UTR-3UTR CAA 90 bp | GCTAGAGTAAGCAAAACAGAATGTCAGGAAGGGAAACAACACATTATTACTGTCCCCCACCACCCAGATTaGAATTTGACATTAGGAAGG | + |
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Preference number: 3 (lower is better) Translates to: ARVSKTECQEGKQHIITVPHHPD*NLTLGR Trigger: CCTTCCTAATGTCAAATTCAAATCTGGGTGGTGGGG...GACAGTAATAATGTGTTGTTTCCCTTCCTGACATTCTGTTTTGCTTACTCTAGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113075.8 |
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| 3UTR CCA 72 bp | TCTATTAACAATGGATTCATAGGTTTTAGAAACAACTaGCTAAGTTGGAAAATCAGTCACAGCTTTCATAGG | + |
|
Preference number: 3 (lower is better) Translates to: SINNGFIGFRNN*LSWKISHSFHR Trigger: CCTATGAAAGCTGTGACTGATTTTCCAACTTAGCCAGTTGTTTCTAAAACCTATGAATCCATTGTTAATAGA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113075.8 |
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| CDS-3UTR GCA 90 bp | CCCAAAACCCGCAGCCCTGGCACCCAAAGTCAGTCAGCGGTGGTAGCTCCTGGTCCAGGACGCTTCGCCTaGCAGGAAGCTGGAGCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: PKTRSPGTQSQSAVVAPGPGRFA*QEAGAS Trigger: AGAGGCTCCAGCTTCCTGGCAGGCGAAGCGTCCTGG...ACCAGGAGCTACCACCGCTGACTGACTTTGGGTGCCAGGGCTGCGGGTTTTGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028220.10 ENSMUST00000091020.10 ENSMUST00000113077.8 ENSMUST00000113078.8 ENSMUST00000113080.9 |
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| CDS-3UTR CCA 90 bp | CCCAAAACCCGCAGCCCTGGCACCCAAAGTCAGTCAGCGGTGGTAGCTCCTGGTGGTCAGGCATGCTGGTaGCAAAGACTAAGCCCGTGT | + |
|
Preference number: 4 (lower is better) Translates to: PKTRSPGTQSQSAVVAPGGQACW*QRLSPC Trigger: ACACGGGCTTAGTCTTTGCCACCAGCATGCCTGACC...ACCAGGAGCTACCACCGCTGACTGACTTTGGGTGCCAGGGCTGCGGGTTTTGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028220.10 ENSMUST00000091020.10 ENSMUST00000113077.8 ENSMUST00000113078.8 ENSMUST00000113080.9 |
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| CDS-3UTR CCA 90 bp | CCCAAAACCCGCAGCCCTGGCACCCAAAGTCAGTCAGCGGTGGTAGCTCCTGGTTGTGGTCAGGCATGCTaGTGGCAAAGACTAAGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: PKTRSPGTQSQSAVVAPGCGQAC*WQRLSP Trigger: CGGGCTTAGTCTTTGCCACCAGCATGCCTGACCACA...ACCAGGAGCTACCACCGCTGACTGACTTTGGGTGCCAGGGCTGCGGGTTTTGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028220.10 ENSMUST00000091020.10 ENSMUST00000113077.8 ENSMUST00000113078.8 ENSMUST00000113080.9 |
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| CDS-3UTR TCA 90 bp | CCCAAAACCCGCAGCCCTGGCACCCAAAGTCAGTCAGCGGTGGTAGCTCCTGGTAGACCAGGCAGCATGTaGGTAAAGTCTGAGGATCGA | + |
|
Preference number: 4 (lower is better) Translates to: PKTRSPGTQSQSAVVAPGRPGSM*VKSEDR Trigger: TCGATCCTCAGACTTTACTCACATGCTGCCTGGTCT...ACCAGGAGCTACCACCGCTGACTGACTTTGGGTGCCAGGGCTGCGGGTTTTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028220.10 ENSMUST00000113077.8 ENSMUST00000113078.8 ENSMUST00000113080.9 |
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| CDS-3UTR TCA 90 bp | CCCAAAACCCGCAGCCCTGGCACCCAAAGTCAGTCAGCGGTGGTAGCTCCTGGTATTCAGTATGCCCAGTaGGTGTATTCAGGCATGTCC | + |
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Preference number: 4 (lower is better) Translates to: PKTRSPGTQSQSAVVAPGIQYAQ*VYSGMS Trigger: GGACATGCCTGAATACACTCACTGGGCATACTGAAT...ACCAGGAGCTACCACCGCTGACTGACTTTGGGTGCCAGGGCTGCGGGTTTTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028220.10 ENSMUST00000091020.10 ENSMUST00000113077.8 ENSMUST00000113078.8 ENSMUST00000113080.9 |
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| CDS-3UTR GCA 90 bp | CCCAAAACCCGCAGCCCTGGCACCCAAAGTCAGTCAGCGGTGGTAGCTCCTGGTGTGACCCATTCAGTATaGCCAGTGAGTGTATTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: PKTRSPGTQSQSAVVAPGVTHSV*PVSVFR Trigger: CCTGAATACACTCACTGGGCATACTGAATGGGTCAC...ACCAGGAGCTACCACCGCTGACTGACTTTGGGTGCCAGGGCTGCGGGTTTTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028220.10 ENSMUST00000091020.10 ENSMUST00000113077.8 ENSMUST00000113078.8 ENSMUST00000113080.9 |
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| CDS-3UTR TCA 90 bp | CCCAAAACCCGCAGCCCTGGCACCCAAAGTCAGTCAGCGGTGGTAGCTCCTGGTCAGTGCAATGAGTCCTaGACAGAATCATCTATCTGC | + |
|
Preference number: 4 (lower is better) Translates to: PKTRSPGTQSQSAVVAPGQCNES*TESSIC Trigger: GCAGATAGATGATTCTGTTCAGGACTCATTGCACTG...ACCAGGAGCTACCACCGCTGACTGACTTTGGGTGCCAGGGCTGCGGGTTTTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028220.10 ENSMUST00000113077.8 ENSMUST00000113078.8 ENSMUST00000113080.9 |
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| CDS-3UTR TCA 90 bp | CCCAAAACCCGCAGCCCTGGCACCCAAAGTCAGTCAGCGGTGGTAGCTCCTGGTTCAAGCACTTACAGTTaGTTTCTCTCCCAATTGGCC | + |
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Preference number: 4 (lower is better) Translates to: PKTRSPGTQSQSAVVAPGSSTYS*FLSQLA Trigger: GGCCAATTGGGAGAGAAATCAACTGTAAGTGCTTGA...ACCAGGAGCTACCACCGCTGACTGACTTTGGGTGCCAGGGCTGCGGGTTTTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028220.10 ENSMUST00000091020.10 ENSMUST00000113077.8 ENSMUST00000113078.8 ENSMUST00000113080.9 |
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| CDS-3UTR GCA 90 bp | CCCAAAACCCGCAGCCCTGGCACCCAAAGTCAGTCAGCGGTGGTAGCTCCTGGTTTTTTACATGCAGTCTaGCACACCTCTGTACAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: PKTRSPGTQSQSAVVAPGFLHAV*HTSVQA Trigger: TGCCTGTACAGAGGTGTGGCAGACTGCATGTAAAAA...ACCAGGAGCTACCACCGCTGACTGACTTTGGGTGCCAGGGCTGCGGGTTTTGGG 56% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000028220.10 ENSMUST00000113077.8 ENSMUST00000113078.8 ENSMUST00000113080.9 |
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| CDS-3UTR GCA 90 bp | CCCAAAACCCGCAGCCCTGGCACCCAAAGTCAGTCAGCGGTGGTAGCTCCTGGTGCCCAAATTTTTACATaGAGTCTGCCACACCTCTGT | + |
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Preference number: 4 (lower is better) Translates to: PKTRSPGTQSQSAVVAPGAQIFT*SLPHLC Trigger: ACAGAGGTGTGGCAGACTGCATGTAAAAATTTGGGC...ACCAGGAGCTACCACCGCTGACTGACTTTGGGTGCCAGGGCTGCGGGTTTTGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000028220.10 ENSMUST00000113077.8 ENSMUST00000113078.8 ENSMUST00000113080.9 |
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| CDS-3UTR GCA 90 bp | CCCAAAACCCGCAGCCCTGGCACCCAAAGTCAGTCAGCGGTGGTAGCTCCTGGTTCATGGTCCTCCAGTTaGTTCATCCTCAAAATAGCC | + |
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Preference number: 4 (lower is better) Translates to: PKTRSPGTQSQSAVVAPGSWSSS*FILKIA Trigger: GGCTATTTTGAGGATGAAGCAACTGGAGGACCATGA...ACCAGGAGCTACCACCGCTGACTGACTTTGGGTGCCAGGGCTGCGGGTTTTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000028220.10 ENSMUST00000113077.8 ENSMUST00000113078.8 ENSMUST00000113080.9 |
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| CDS-3UTR TCA 90 bp | CCCAAAACCCGCAGCCCTGGCACCCAAAGTCAGTCAGCGGTGGTAGCTCCTGGTCATGTGAGTAAAGTCTaGGGATCGAGCCATTTTAAC | + |
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Preference number: 4 (lower is better) Translates to: PKTRSPGTQSQSAVVAPGHVSKV*GSSHFN Trigger: GTTAAAATGGCTCGATCCTCAGACTTTACTCACATG...ACCAGGAGCTACCACCGCTGACTGACTTTGGGTGCCAGGGCTGCGGGTTTTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000028220.10 ENSMUST00000113077.8 ENSMUST00000113078.8 ENSMUST00000113080.9 |
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| CDS-3UTR TCA 90 bp | CCCAAAACCCGCAGCCCTGGCACCCAAAGTCAGTCAGCGGTGGTAGCTCCTGGTTTAACAAATAAAAACTaGGCTCCAGGGGAAGGAGTT | + |
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Preference number: 4 (lower is better) Translates to: PKTRSPGTQSQSAVVAPGLTNKN*APGEGV Trigger: AACTCCTTCCCCTGGAGCTCAGTTTTTATTTGTTAA...ACCAGGAGCTACCACCGCTGACTGACTTTGGGTGCCAGGGCTGCGGGTTTTGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000028220.10 ENSMUST00000113077.8 ENSMUST00000113078.8 ENSMUST00000113080.9 |
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| CDS-3UTR TCA 90 bp | CCCAAAACCCGCAGCCCTGGCACCCAAAGTCAGTCAGCGGTGGTAGCTCCTGGTCAATTGGCCAAATCTTaGTCTCATATTTGTCTGCAC | + |
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Preference number: 4 (lower is better) Translates to: PKTRSPGTQSQSAVVAPGQLAKS*SHICLH Trigger: GTGCAGACAAATATGAGATCAAGATTTGGCCAATTG...ACCAGGAGCTACCACCGCTGACTGACTTTGGGTGCCAGGGCTGCGGGTTTTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028220.10 ENSMUST00000091020.10 ENSMUST00000113077.8 ENSMUST00000113078.8 ENSMUST00000113080.9 |
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| CDS-3UTR GCA 90 bp | ATGAAGTCAATGGTGTATCCCATTAGCATGCTGCGGTGTATGTCAGTAAACAAGAACACCGCCCCCGTGTaGCCCCGGAAGTGCTGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: MKSMVYPISMLRCMSVNKNTAPV*PRKCWV Trigger: GACCCAGCACTTCCGGGGGCACACGGGGGCGGTGTT...CTTGTTTACTGACATACACCGCAGCATGCTAATGGGATACACCATTGACTTCAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000028220.10 ENSMUST00000091020.10 ENSMUST00000113078.8 ENSMUST00000113080.9 |
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| CDS-3UTR CCA 90 bp | CCCAAAACCCGCAGCCCTGGCACCCAAAGTCAGTCAGCGGTGGTAGCTCCTGGTCTCAGACTAATCAGGTaGTCCAGAGTTTCATTTTTC | + |
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Preference number: 4 (lower is better) Translates to: PKTRSPGTQSQSAVVAPGLRLIR*SRVSFF Trigger: GAAAAATGAAACTCTGGACCACCTGATTAGTCTGAG...ACCAGGAGCTACCACCGCTGACTGACTTTGGGTGCCAGGGCTGCGGGTTTTGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000028220.10 ENSMUST00000113077.8 ENSMUST00000113078.8 ENSMUST00000113080.9 |
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| CDS-3UTR CCA 90 bp | CCCAAAACCCGCAGCCCTGGCACCCAAAGTCAGTCAGCGGTGGTAGCTCCTGGTATCAAAATGAAGTCTTaGCTGCAGGCAGATACTTCT | + |
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Preference number: 4 (lower is better) Translates to: PKTRSPGTQSQSAVVAPGIKMKS*LQADTS Trigger: AGAAGTATCTGCCTGCAGCCAAGACTTCATTTTGAT...ACCAGGAGCTACCACCGCTGACTGACTTTGGGTGCCAGGGCTGCGGGTTTTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000028220.10 ENSMUST00000091020.10 ENSMUST00000113077.8 ENSMUST00000113078.8 ENSMUST00000113080.9 |
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| CDS-3UTR GCA 90 bp | CCCAAAACCCGCAGCCCTGGCACCCAAAGTCAGTCAGCGGTGGTAGCTCCTGGTAGAGTTTCATTTTTCTaGAAGTCCGTCAGAGAAAGA | + |
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Preference number: 4 (lower is better) Translates to: PKTRSPGTQSQSAVVAPGRVSFF*KSVRER Trigger: TCTTTCTCTGACGGACTTGCAGAAAAATGAAACTCT...ACCAGGAGCTACCACCGCTGACTGACTTTGGGTGCCAGGGCTGCGGGTTTTGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000028220.10 ENSMUST00000113077.8 ENSMUST00000113078.8 ENSMUST00000113080.9 |
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| CDS-3UTR CCA 90 bp | CCCAAAACCCGCAGCCCTGGCACCCAAAGTCAGTCAGCGGTGGTAGCTCCTGGTGATTTCTCTCCCAATTaGCCAAATCTTGATCTCATA | + |
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Preference number: 4 (lower is better) Translates to: PKTRSPGTQSQSAVVAPGDFSPN*PNLDLI Trigger: TATGAGATCAAGATTTGGCCAATTGGGAGAGAAATC...ACCAGGAGCTACCACCGCTGACTGACTTTGGGTGCCAGGGCTGCGGGTTTTGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028220.10 ENSMUST00000091020.10 ENSMUST00000113077.8 ENSMUST00000113078.8 ENSMUST00000113080.9 |
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| CDS-3UTR GCA 90 bp | ATGAAGTCAATGGTGTATCCCATTAGCATGCTGCGGTGTATGTCAGTAAACAAGCCAGGACGCTTCGCCTaGCAGGAAGCTGGAGCCTCT | + |
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Preference number: 4 (lower is better) Translates to: MKSMVYPISMLRCMSVNKPGRFA*QEAGAS Trigger: AGAGGCTCCAGCTTCCTGGCAGGCGAAGCGTCCTGG...CTTGTTTACTGACATACACCGCAGCATGCTAATGGGATACACCATTGACTTCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000028220.10 ENSMUST00000091020.10 ENSMUST00000113077.8 ENSMUST00000113078.8 ENSMUST00000113080.9 |
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| CDS-3UTR TCA 90 bp | AAAGTTACCATCACCACCACCACCCCACCACCCAGATTTGAATTTGACATTAGGTATTGGAGAGATGCCTaGGCTGGACTGCCCCACTCA | + |
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Preference number: 4 (lower is better) Translates to: KVTITTTTPPPRFEFDIRYWRDA*AGLPHS Trigger: TGAGTGGGGCAGTCCAGCTCAGGCATCTCTCCAATA...CCTAATGTCAAATTCAAATCTGGGTGGTGGGGTGGTGGTGGTGATGGTAACTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113075.8 |
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| CDS-3UTR TCA 90 bp | AGCTTCCCTGTGTCAAGCACCAGATTGACAGGACAAGTCAGATGTTGTCTGGAGAGACCAGGCAGCATGTaGGTAAAGTCTGAGGATCGA | + |
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Preference number: 4 (lower is better) Translates to: SFPVSSTRLTGQVRCCLERPGSM*VKSEDR Trigger: TCGATCCTCAGACTTTACTCACATGCTGCCTGGTCT...CTCCAGACAACATCTGACTTGTCCTGTCAATCTGGTGCTTGACACAGGGAAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113075.8 |
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| CDS-3UTR GCA 90 bp | ATCATTTACCATGTGTTGGGCATAAAACTTCTAATTAACACAGAGCACATGCTGAACACCGCCCCCGTGTaGCCCCGGAAGTGCTGGGTC | + |
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Preference number: 4 (lower is better) Translates to: IIYHVLGIKLLINTEHMLNTAPV*PRKCWV Trigger: GACCCAGCACTTCCGGGGGCACACGGGGGCGGTGTT...CAGCATGTGCTCTGTGTTAATTAGAAGTTTTATGCCCAACACATGGTAAATGAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000113075.8 |
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| 3UTR CAA 72 bp | TGTGTCAAGCACCAGATTGACAGGACAAGTCAGATGTaGTCTGGAGTCTACACTTTCCCACGGCAACCTCCT | + |
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Preference number: 4 (lower is better) Translates to: CVKHQIDRTSQM*SGVYTFPRQPP Trigger: AGGAGGTTGCCGTGGGAAAGTGTAGACTCCAGACAACATCTGACTTGTCCTGTCAATCTGGTGCTTGACACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113075.8 |
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| CDS-3UTR GCA 90 bp | CCATGTGAGAAAAGTTGCTATAACATAGCACCTTTGCTTCAATTTCAAAGAACAAACACCGCCCCCGTGTaGCCCCGGAAGTGCTGGGTC | + |
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Preference number: 4 (lower is better) Translates to: PCEKSCYNIAPLLQFQRTNTAPV*PRKCWV Trigger: GACCCAGCACTTCCGGGGGCACACGGGGGCGGTGTT...TGTTCTTTGAAATTGAAGCAAAGGTGCTATGTTATAGCAACTTTTCTCACATGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000028220.10 |
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| CDS-3UTR GCA 90 bp | ACTCAATATTCCACTCAGAAAGATAAATCCAAAAATGCAACCTCTCTTACACTGAACACCGCCCCCGTGTaGCCCCGGAAGTGCTGGGTC | + |
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Preference number: 4 (lower is better) Translates to: TQYSTQKDKSKNATSLTLNTAPV*PRKCWV Trigger: GACCCAGCACTTCCGGGGGCACACGGGGGCGGTGTT...CAGTGTAAGAGAGGTTGCATTTTTGGATTTATCTTTCTGAGTGGAATATTGAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000028220.10 ENSMUST00000091020.10 ENSMUST00000113078.8 ENSMUST00000113080.9 |
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| CDS-3UTR TCA 90 bp | ATGAAGTCAATGGTGTATCCCATTAGCATGCTGCGGTGTATGTCAGTAAACAAGTATTGGAGAGATGCCTaGGCTGGACTGCCCCACTCA | + |
|
Preference number: 4 (lower is better) Translates to: MKSMVYPISMLRCMSVNKYWRDA*AGLPHS Trigger: TGAGTGGGGCAGTCCAGCTCAGGCATCTCTCCAATA...CTTGTTTACTGACATACACCGCAGCATGCTAATGGGATACACCATTGACTTCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028220.10 ENSMUST00000113077.8 ENSMUST00000113078.8 ENSMUST00000113080.9 |
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| CDS-3UTR CCA 90 bp | ATGAAGTCAATGGTGTATCCCATTAGCATGCTGCGGTGTATGTCAGTAAACAAGGGTCAGGCATGCTGGTaGCAAAGACTAAGCCCGTGT | + |
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Preference number: 4 (lower is better) Translates to: MKSMVYPISMLRCMSVNKGQACW*QRLSPC Trigger: ACACGGGCTTAGTCTTTGCCACCAGCATGCCTGACC...CTTGTTTACTGACATACACCGCAGCATGCTAATGGGATACACCATTGACTTCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000028220.10 ENSMUST00000091020.10 ENSMUST00000113077.8 ENSMUST00000113078.8 ENSMUST00000113080.9 |
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| CDS-3UTR CCA 90 bp | ATGAAGTCAATGGTGTATCCCATTAGCATGCTGCGGTGTATGTCAGTAAACAAGTGTGGTCAGGCATGCTaGTGGCAAAGACTAAGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: MKSMVYPISMLRCMSVNKCGQAC*WQRLSP Trigger: CGGGCTTAGTCTTTGCCACCAGCATGCCTGACCACA...CTTGTTTACTGACATACACCGCAGCATGCTAATGGGATACACCATTGACTTCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000028220.10 ENSMUST00000091020.10 ENSMUST00000113077.8 ENSMUST00000113078.8 ENSMUST00000113080.9 |
||
| CDS-3UTR GCA 90 bp | ATGAAGTCAATGGTGTATCCCATTAGCATGCTGCGGTGTATGTCAGTAAACAAGATGCCTGAGCTGGACTaGCCCACTCAGACTAATCAG | + |
|
Preference number: 4 (lower is better) Translates to: MKSMVYPISMLRCMSVNKMPELD*PTQTNQ Trigger: CTGATTAGTCTGAGTGGGGCAGTCCAGCTCAGGCAT...CTTGTTTACTGACATACACCGCAGCATGCTAATGGGATACACCATTGACTTCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028220.10 ENSMUST00000113077.8 ENSMUST00000113078.8 ENSMUST00000113080.9 |
||
| CDS-3UTR GCA 90 bp | AAAGTTACCATCACCACCACCACCCCACCACCCAGATTTGAATTTGACATTAGGGTGACCCATTCAGTATaGCCAGTGAGTGTATTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: KVTITTTTPPPRFEFDIRVTHSV*PVSVFR Trigger: CCTGAATACACTCACTGGGCATACTGAATGGGTCAC...CCTAATGTCAAATTCAAATCTGGGTGGTGGGGTGGTGGTGGTGATGGTAACTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113075.8 |
||
| CDS-3UTR GCA 90 bp | ACTCAATATTCCACTCAGAAAGATAAATCCAAAAATGCAACCTCTCTTACACTGCCAGGACGCTTCGCCTaGCAGGAAGCTGGAGCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: TQYSTQKDKSKNATSLTLPGRFA*QEAGAS Trigger: AGAGGCTCCAGCTTCCTGGCAGGCGAAGCGTCCTGG...CAGTGTAAGAGAGGTTGCATTTTTGGATTTATCTTTCTGAGTGGAATATTGAGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000028220.10 ENSMUST00000091020.10 ENSMUST00000113077.8 ENSMUST00000113078.8 ENSMUST00000113080.9 |
||
| CDS-3UTR TCA 90 bp | ATGAAGTCAATGGTGTATCCCATTAGCATGCTGCGGTGTATGTCAGTAAACAAGATTCAGTATGCCCAGTaGGTGTATTCAGGCATGTCC | + |
|
Preference number: 4 (lower is better) Translates to: MKSMVYPISMLRCMSVNKIQYAQ*VYSGMS Trigger: GGACATGCCTGAATACACTCACTGGGCATACTGAAT...CTTGTTTACTGACATACACCGCAGCATGCTAATGGGATACACCATTGACTTCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000028220.10 ENSMUST00000091020.10 ENSMUST00000113077.8 ENSMUST00000113078.8 ENSMUST00000113080.9 |
||
| CDS-3UTR GCA 90 bp | ATGAAGTCAATGGTGTATCCCATTAGCATGCTGCGGTGTATGTCAGTAAACAAGGTGACCCATTCAGTATaGCCAGTGAGTGTATTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: MKSMVYPISMLRCMSVNKVTHSV*PVSVFR Trigger: CCTGAATACACTCACTGGGCATACTGAATGGGTCAC...CTTGTTTACTGACATACACCGCAGCATGCTAATGGGATACACCATTGACTTCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000028220.10 ENSMUST00000091020.10 ENSMUST00000113077.8 ENSMUST00000113078.8 ENSMUST00000113080.9 |
||
| CDS-3UTR TCA 90 bp | AAAGTTACCATCACCACCACCACCCCACCACCCAGATTTGAATTTGACATTAGGTTAACAAATAAAAACTaGGCTCCAGGGGAAGGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: KVTITTTTPPPRFEFDIRLTNKN*APGEGV Trigger: AACTCCTTCCCCTGGAGCTCAGTTTTTATTTGTTAA...CCTAATGTCAAATTCAAATCTGGGTGGTGGGGTGGTGGTGGTGATGGTAACTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000113075.8 |
||
| CDS-3UTR TCA 90 bp | ATGAAGTCAATGGTGTATCCCATTAGCATGCTGCGGTGTATGTCAGTAAACAAGCAGTGCAATGAGTCCTaGACAGAATCATCTATCTGC | + |
|
Preference number: 4 (lower is better) Translates to: MKSMVYPISMLRCMSVNKQCNES*TESSIC Trigger: GCAGATAGATGATTCTGTTCAGGACTCATTGCACTG...CTTGTTTACTGACATACACCGCAGCATGCTAATGGGATACACCATTGACTTCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028220.10 ENSMUST00000113077.8 ENSMUST00000113078.8 ENSMUST00000113080.9 |
||
| CDS-3UTR TCA 90 bp | ATGAAGTCAATGGTGTATCCCATTAGCATGCTGCGGTGTATGTCAGTAAACAAGTCAAGCACTTACAGTTaGTTTCTCTCCCAATTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: MKSMVYPISMLRCMSVNKSSTYS*FLSQLA Trigger: GGCCAATTGGGAGAGAAATCAACTGTAAGTGCTTGA...CTTGTTTACTGACATACACCGCAGCATGCTAATGGGATACACCATTGACTTCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000028220.10 ENSMUST00000091020.10 ENSMUST00000113077.8 ENSMUST00000113078.8 ENSMUST00000113080.9 |
||
| CDS-3UTR TCA 90 bp | AAACAGCAGAGTGTGGATAGAGAAGGCCTCCCATTACAACTTCTAGAAAACAGATCAAGCACTTACAGTTaGTTTCTCTCCCAATTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: KQQSVDREGLPLQLLENRSSTYS*FLSQLA Trigger: GGCCAATTGGGAGAGAAATCAACTGTAAGTGCTTGA...TCTGTTTTCTAGAAGTTGTAATGGGAGGCCTTCTCTATCCACACTCTGCTGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113075.8 |
||
| CDS-3UTR TCA 90 bp | ATGAAGTCAATGGTGTATCCCATTAGCATGCTGCGGTGTATGTCAGTAAACAAGGTACAGACCCAGGGCTaGACTACAGACAATGTATTT | + |
|
Preference number: 4 (lower is better) Translates to: MKSMVYPISMLRCMSVNKVQTQG*TTDNVF Trigger: AAATACATTGTCTGTAGTTCAGCCCTGGGTCTGTAC...CTTGTTTACTGACATACACCGCAGCATGCTAATGGGATACACCATTGACTTCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000028220.10 ENSMUST00000091020.10 ENSMUST00000113077.8 ENSMUST00000113078.8 ENSMUST00000113080.9 |
||
| CDS-3UTR GCA 90 bp | TTACCATCACCACCACCACCCCACCACCCAGATTTGAATTTGACATTAGGAAGGAGAGTTTCATTTTTCTaGAAGTCCGTCAGAGAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: LPSPPPPHHPDLNLTLGRRVSFF*KSVRER Trigger: TCTTTCTCTGACGGACTTGCAGAAAAATGAAACTCT...CCTTCCTAATGTCAAATTCAAATCTGGGTGGTGGGGTGGTGGTGGTGATGGTAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113075.8 |
||
| CDS-3UTR GCA 90 bp | ATGAAGTCAATGGTGTATCCCATTAGCATGCTGCGGTGTATGTCAGTAAACAAGATCACCTTATTCCACTaGTTAGAGACCAGGCAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: MKSMVYPISMLRCMSVNKITLFH*LETRQH Trigger: ATGCTGCCTGGTCTCTAAGCAGTGGAATAAGGTGAT...CTTGTTTACTGACATACACCGCAGCATGCTAATGGGATACACCATTGACTTCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028220.10 ENSMUST00000113077.8 ENSMUST00000113078.8 ENSMUST00000113080.9 |
||
| CDS-3UTR GCA 90 bp | ATGAAGTCAATGGTGTATCCCATTAGCATGCTGCGGTGTATGTCAGTAAACAAGGCCCAAATTTTTACATaGAGTCTGCCACACCTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: MKSMVYPISMLRCMSVNKAQIFT*SLPHLC Trigger: ACAGAGGTGTGGCAGACTGCATGTAAAAATTTGGGC...CTTGTTTACTGACATACACCGCAGCATGCTAATGGGATACACCATTGACTTCAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000028220.10 ENSMUST00000113077.8 ENSMUST00000113078.8 ENSMUST00000113080.9 |
||
| CDS-3UTR GCA 90 bp | TTACCATCACCACCACCACCCCACCACCCAGATTTGAATTTGACATTAGGAAGGATCTTTGTAGTAAAGTaGATACACTCTGGCACTATG | + |
|
Preference number: 4 (lower is better) Translates to: LPSPPPPHHPDLNLTLGRIFVVK*IHSGTM Trigger: CATAGTGCCAGAGTGTATGCACTTTACTACAAAGAT...CCTTCCTAATGTCAAATTCAAATCTGGGTGGTGGGGTGGTGGTGGTGATGGTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113075.8 |
||
| CDS-3UTR CCA 90 bp | TTACCATCACCACCACCACCCCACCACCCAGATTTGAATTTGACATTAGGAAGGGATTTCTCTCCCAATTaGCCAAATCTTGATCTCATA | + |
|
Preference number: 4 (lower is better) Translates to: LPSPPPPHHPDLNLTLGRDFSPN*PNLDLI Trigger: TATGAGATCAAGATTTGGCCAATTGGGAGAGAAATC...CCTTCCTAATGTCAAATTCAAATCTGGGTGGTGGGGTGGTGGTGGTGATGGTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113075.8 |
||
| CDS-3UTR CCA 90 bp | ACTCAATATTCCACTCAGAAAGATAAATCCAAAAATGCAACCTCTCTTACACTGGGTCAGGCATGCTGGTaGCAAAGACTAAGCCCGTGT | + |
|
Preference number: 4 (lower is better) Translates to: TQYSTQKDKSKNATSLTLGQACW*QRLSPC Trigger: ACACGGGCTTAGTCTTTGCCACCAGCATGCCTGACC...CAGTGTAAGAGAGGTTGCATTTTTGGATTTATCTTTCTGAGTGGAATATTGAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000028220.10 ENSMUST00000091020.10 ENSMUST00000113077.8 ENSMUST00000113078.8 ENSMUST00000113080.9 |
||
| CDS-3UTR CCA 90 bp | CCATGTGAGAAAAGTTGCTATAACATAGCACCTTTGCTTCAATTTCAAAGAACATGTGGTCAGGCATGCTaGTGGCAAAGACTAAGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: PCEKSCYNIAPLLQFQRTCGQAC*WQRLSP Trigger: CGGGCTTAGTCTTTGCCACCAGCATGCCTGACCACA...TGTTCTTTGAAATTGAAGCAAAGGTGCTATGTTATAGCAACTTTTCTCACATGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028220.10 |
||
| CDS-3UTR CCA 90 bp | ACTCAATATTCCACTCAGAAAGATAAATCCAAAAATGCAACCTCTCTTACACTGTGTGGTCAGGCATGCTaGTGGCAAAGACTAAGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: TQYSTQKDKSKNATSLTLCGQAC*WQRLSP Trigger: CGGGCTTAGTCTTTGCCACCAGCATGCCTGACCACA...CAGTGTAAGAGAGGTTGCATTTTTGGATTTATCTTTCTGAGTGGAATATTGAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000028220.10 ENSMUST00000091020.10 ENSMUST00000113077.8 ENSMUST00000113078.8 ENSMUST00000113080.9 |
||
| CDS-3UTR TCA 90 bp | AGGAAGGGAAACAACACATTATTACTGTCAAACAGCAGAGTGTGGATAGAGAAGCAGTGCAATGAGTCCTaGACAGAATCATCTATCTGC | + |
|
Preference number: 4 (lower is better) Translates to: RKGNNTLLLSNSRVWIEKQCNES*TESSIC Trigger: GCAGATAGATGATTCTGTTCAGGACTCATTGCACTG...CTTCTCTATCCACACTCTGCTGTTTGACAGTAATAATGTGTTGTTTCCCTTCCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113075.8 |
||
| CDS-3UTR TCA 90 bp | AGCAAAACAGAATGTCAGGAAGGGAAACAACACATTATTACTGTCAAACAGCAGATTCAGTATGCCCAGTaGGTGTATTCAGGCATGTCC | + |
|
Preference number: 4 (lower is better) Translates to: SKTECQEGKQHIITVKQQIQYAQ*VYSGMS Trigger: GGACATGCCTGAATACACTCACTGGGCATACTGAAT...CTGCTGTTTGACAGTAATAATGTGTTGTTTCCCTTCCTGACATTCTGTTTTGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113075.8 |
||
| CDS-3UTR GCA 90 bp | AGGAAGGGAAACAACACATTATTACTGTCAAACAGCAGAGTGTGGATAGAGAAGATCACCTTATTCCACTaGTTAGAGACCAGGCAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: RKGNNTLLLSNSRVWIEKITLFH*LETRQH Trigger: ATGCTGCCTGGTCTCTAAGCAGTGGAATAAGGTGAT...CTTCTCTATCCACACTCTGCTGTTTGACAGTAATAATGTGTTGTTTCCCTTCCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113075.8 |
||
| CDS-3UTR GCA 90 bp | AGGAAGGGAAACAACACATTATTACTGTCAAACAGCAGAGTGTGGATAGAGAAGTTTTTACATGCAGTCTaGCACACCTCTGTACAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: RKGNNTLLLSNSRVWIEKFLHAV*HTSVQA Trigger: TGCCTGTACAGAGGTGTGGCAGACTGCATGTAAAAA...CTTCTCTATCCACACTCTGCTGTTTGACAGTAATAATGTGTTGTTTCCCTTCCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113075.8 |
||
| CDS-3UTR TCA 90 bp | ACTCAATATTCCACTCAGAAAGATAAATCCAAAAATGCAACCTCTCTTACACTGAGACCAGGCAGCATGTaGGTAAAGTCTGAGGATCGA | + |
|
Preference number: 4 (lower is better) Translates to: TQYSTQKDKSKNATSLTLRPGSM*VKSEDR Trigger: TCGATCCTCAGACTTTACTCACATGCTGCCTGGTCT...CAGTGTAAGAGAGGTTGCATTTTTGGATTTATCTTTCTGAGTGGAATATTGAGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000028220.10 ENSMUST00000113077.8 ENSMUST00000113078.8 ENSMUST00000113080.9 |
||
| CDS-3UTR TCA 90 bp | ATGAAGTCAATGGTGTATCCCATTAGCATGCTGCGGTGTATGTCAGTAAACAAGCAATTGGCCAAATCTTaGTCTCATATTTGTCTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: MKSMVYPISMLRCMSVNKQLAKS*SHICLH Trigger: GTGCAGACAAATATGAGATCAAGATTTGGCCAATTG...CTTGTTTACTGACATACACCGCAGCATGCTAATGGGATACACCATTGACTTCAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000028220.10 ENSMUST00000091020.10 ENSMUST00000113077.8 ENSMUST00000113078.8 ENSMUST00000113080.9 |
||
| CDS-3UTR GCA 90 bp | AGCAAAACAGAATGTCAGGAAGGGAAACAACACATTATTACTGTCAAACAGCAGGCCCAAATTTTTACATaGAGTCTGCCACACCTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: SKTECQEGKQHIITVKQQAQIFT*SLPHLC Trigger: ACAGAGGTGTGGCAGACTGCATGTAAAAATTTGGGC...CTGCTGTTTGACAGTAATAATGTGTTGTTTCCCTTCCTGACATTCTGTTTTGCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113075.8 |
||
| CDS-3UTR GCA 90 bp | GCTAGAGTAAGCAAAACAGAATGTCAGGAAGGGAAACAACACATTATTACTGTCTCATGGTCCTCCAGTTaGTTCATCCTCAAAATAGCC | + |
|
Preference number: 4 (lower is better) Translates to: ARVSKTECQEGKQHIITVSWSSS*FILKIA Trigger: GGCTATTTTGAGGATGAAGCAACTGGAGGACCATGA...GACAGTAATAATGTGTTGTTTCCCTTCCTGACATTCTGTTTTGCTTACTCTAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113075.8 |
||
| CDS-3UTR CCA 90 bp | ATGAAGTCAATGGTGTATCCCATTAGCATGCTGCGGTGTATGTCAGTAAACAAGCTCAGACTAATCAGGTaGTCCAGAGTTTCATTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: MKSMVYPISMLRCMSVNKLRLIR*SRVSFF Trigger: GAAAAATGAAACTCTGGACCACCTGATTAGTCTGAG...CTTGTTTACTGACATACACCGCAGCATGCTAATGGGATACACCATTGACTTCAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000028220.10 ENSMUST00000113077.8 ENSMUST00000113078.8 ENSMUST00000113080.9 |
||
| CDS-3UTR CCA 90 bp | ATGAAGTCAATGGTGTATCCCATTAGCATGCTGCGGTGTATGTCAGTAAACAAGAAAGTGCATACACTCTaGCACTATGTCCAATTAACG | + |
|
Preference number: 4 (lower is better) Translates to: MKSMVYPISMLRCMSVNKKVHTL*HYVQLT Trigger: CGTTAATTGGACATAGTGCCAGAGTGTATGCACTTT...CTTGTTTACTGACATACACCGCAGCATGCTAATGGGATACACCATTGACTTCAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000028220.10 ENSMUST00000091020.10 ENSMUST00000113077.8 ENSMUST00000113078.8 ENSMUST00000113080.9 |
||
| CDS-3UTR CCA 90 bp | ATGAAGTCAATGGTGTATCCCATTAGCATGCTGCGGTGTATGTCAGTAAACAAGATCAAAATGAAGTCTTaGCTGCAGGCAGATACTTCT | + |
|
Preference number: 4 (lower is better) Translates to: MKSMVYPISMLRCMSVNKIKMKS*LQADTS Trigger: AGAAGTATCTGCCTGCAGCCAAGACTTCATTTTGAT...CTTGTTTACTGACATACACCGCAGCATGCTAATGGGATACACCATTGACTTCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028220.10 ENSMUST00000091020.10 ENSMUST00000113077.8 ENSMUST00000113078.8 ENSMUST00000113080.9 |
||
| CDS-3UTR TCA 90 bp | ACTCAATATTCCACTCAGAAAGATAAATCCAAAAATGCAACCTCTCTTACACTGATTCAGTATGCCCAGTaGGTGTATTCAGGCATGTCC | + |
|
Preference number: 4 (lower is better) Translates to: TQYSTQKDKSKNATSLTLIQYAQ*VYSGMS Trigger: GGACATGCCTGAATACACTCACTGGGCATACTGAAT...CAGTGTAAGAGAGGTTGCATTTTTGGATTTATCTTTCTGAGTGGAATATTGAGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000028220.10 ENSMUST00000091020.10 ENSMUST00000113077.8 ENSMUST00000113078.8 ENSMUST00000113080.9 |
||
| CDS-3UTR TCA 90 bp | ATCATTTACCATGTGTTGGGCATAAAACTTCTAATTAACACAGAGCACATGCTGGTACAGACCCAGGGCTaGACTACAGACAATGTATTT | + |
|
Preference number: 4 (lower is better) Translates to: IIYHVLGIKLLINTEHMLVQTQG*TTDNVF Trigger: AAATACATTGTCTGTAGTTCAGCCCTGGGTCTGTAC...CAGCATGTGCTCTGTGTTAATTAGAAGTTTTATGCCCAACACATGGTAAATGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113075.8 |
||
| CDS-3UTR TCA 90 bp | ACTCAATATTCCACTCAGAAAGATAAATCCAAAAATGCAACCTCTCTTACACTGCACTGTAGTCCACACTaGACACTGTACAGAGAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: TQYSTQKDKSKNATSLTLHCSPH*TLYREV Trigger: GACTTCTCTGTACAGTGTTCAGTGTGGACTACAGTG...CAGTGTAAGAGAGGTTGCATTTTTGGATTTATCTTTCTGAGTGGAATATTGAGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113077.8 |
||
| CDS-3UTR GCA 90 bp | ATGAAGTCAATGGTGTATCCCATTAGCATGCTGCGGTGTATGTCAGTAAACAAGATCTTTGTAGTAAAGTaGATACACTCTGGCACTATG | + |
|
Preference number: 4 (lower is better) Translates to: MKSMVYPISMLRCMSVNKIFVVK*IHSGTM Trigger: CATAGTGCCAGAGTGTATGCACTTTACTACAAAGAT...CTTGTTTACTGACATACACCGCAGCATGCTAATGGGATACACCATTGACTTCAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000028220.10 ENSMUST00000091020.10 ENSMUST00000113077.8 ENSMUST00000113078.8 ENSMUST00000113080.9 |
||
| CDS-3UTR GCA 90 bp | ACTCAATATTCCACTCAGAAAGATAAATCCAAAAATGCAACCTCTCTTACACTGGTGACCCATTCAGTATaGCCAGTGAGTGTATTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: TQYSTQKDKSKNATSLTLVTHSV*PVSVFR Trigger: CCTGAATACACTCACTGGGCATACTGAATGGGTCAC...CAGTGTAAGAGAGGTTGCATTTTTGGATTTATCTTTCTGAGTGGAATATTGAGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000028220.10 ENSMUST00000091020.10 ENSMUST00000113077.8 ENSMUST00000113078.8 ENSMUST00000113080.9 |
||
| CDS-3UTR CCA 90 bp | CCATGTGAGAAAAGTTGCTATAACATAGCACCTTTGCTTCAATTTCAAAGAACAGTCTCAAAGGCTTCATaGTCCTCCAGTTGCTTCATC | + |
|
Preference number: 4 (lower is better) Translates to: PCEKSCYNIAPLLQFQRTVSKAS*SSSCFI Trigger: GATGAAGCAACTGGAGGACCATGAAGCCTTTGAGAC...TGTTCTTTGAAATTGAAGCAAAGGTGCTATGTTATAGCAACTTTTCTCACATGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028220.10 |
||
| CDS-3UTR CCA 90 bp | ATGAAGTCAATGGTGTATCCCATTAGCATGCTGCGGTGTATGTCAGTAAACAAGGATTTCTCTCCCAATTaGCCAAATCTTGATCTCATA | + |
|
Preference number: 4 (lower is better) Translates to: MKSMVYPISMLRCMSVNKDFSPN*PNLDLI Trigger: TATGAGATCAAGATTTGGCCAATTGGGAGAGAAATC...CTTGTTTACTGACATACACCGCAGCATGCTAATGGGATACACCATTGACTTCAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000028220.10 ENSMUST00000091020.10 ENSMUST00000113077.8 ENSMUST00000113078.8 ENSMUST00000113080.9 |
||
| CDS-3UTR TCA 90 bp | ATCATTTACCATGTGTTGGGCATAAAACTTCTAATTAACACAGAGCACATGCTGCATGTGAGTAAAGTCTaGGGATCGAGCCATTTTAAC | + |
|
Preference number: 4 (lower is better) Translates to: IIYHVLGIKLLINTEHMLHVSKV*GSSHFN Trigger: GTTAAAATGGCTCGATCCTCAGACTTTACTCACATG...CAGCATGTGCTCTGTGTTAATTAGAAGTTTTATGCCCAACACATGGTAAATGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113075.8 |
||
| CDS-3UTR TCA 90 bp | ACTCAATATTCCACTCAGAAAGATAAATCCAAAAATGCAACCTCTCTTACACTGCAGTGCAATGAGTCCTaGACAGAATCATCTATCTGC | + |
|
Preference number: 4 (lower is better) Translates to: TQYSTQKDKSKNATSLTLQCNES*TESSIC Trigger: GCAGATAGATGATTCTGTTCAGGACTCATTGCACTG...CAGTGTAAGAGAGGTTGCATTTTTGGATTTATCTTTCTGAGTGGAATATTGAGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000028220.10 ENSMUST00000113077.8 ENSMUST00000113078.8 ENSMUST00000113080.9 |
||
| CDS-3UTR TCA 90 bp | ACTCAATATTCCACTCAGAAAGATAAATCCAAAAATGCAACCTCTCTTACACTGTCAAGCACTTACAGTTaGTTTCTCTCCCAATTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: TQYSTQKDKSKNATSLTLSSTYS*FLSQLA Trigger: GGCCAATTGGGAGAGAAATCAACTGTAAGTGCTTGA...CAGTGTAAGAGAGGTTGCATTTTTGGATTTATCTTTCTGAGTGGAATATTGAGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000028220.10 ENSMUST00000091020.10 ENSMUST00000113077.8 ENSMUST00000113078.8 ENSMUST00000113080.9 |
||
| CDS-3UTR TCA 90 bp | CCATGTGAGAAAAGTTGCTATAACATAGCACCTTTGCTTCAATTTCAAAGAACAGTACAGACCCAGGGCTaGACTACAGACAATGTATTT | + |
|
Preference number: 4 (lower is better) Translates to: PCEKSCYNIAPLLQFQRTVQTQG*TTDNVF Trigger: AAATACATTGTCTGTAGTTCAGCCCTGGGTCTGTAC...TGTTCTTTGAAATTGAAGCAAAGGTGCTATGTTATAGCAACTTTTCTCACATGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028220.10 |
||
| CDS-3UTR TCA 90 bp | ACTCAATATTCCACTCAGAAAGATAAATCCAAAAATGCAACCTCTCTTACACTGGTACAGACCCAGGGCTaGACTACAGACAATGTATTT | + |
|
Preference number: 4 (lower is better) Translates to: TQYSTQKDKSKNATSLTLVQTQG*TTDNVF Trigger: AAATACATTGTCTGTAGTTCAGCCCTGGGTCTGTAC...CAGTGTAAGAGAGGTTGCATTTTTGGATTTATCTTTCTGAGTGGAATATTGAGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000028220.10 ENSMUST00000091020.10 ENSMUST00000113077.8 ENSMUST00000113078.8 ENSMUST00000113080.9 |
||
| CDS-3UTR GCA 90 bp | ACTCAATATTCCACTCAGAAAGATAAATCCAAAAATGCAACCTCTCTTACACTGATCACCTTATTCCACTaGTTAGAGACCAGGCAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: TQYSTQKDKSKNATSLTLITLFH*LETRQH Trigger: ATGCTGCCTGGTCTCTAAGCAGTGGAATAAGGTGAT...CAGTGTAAGAGAGGTTGCATTTTTGGATTTATCTTTCTGAGTGGAATATTGAGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000028220.10 ENSMUST00000113077.8 ENSMUST00000113078.8 ENSMUST00000113080.9 |
||
| CDS-3UTR GCA 90 bp | CCATGTGAGAAAAGTTGCTATAACATAGCACCTTTGCTTCAATTTCAAAGAACATTTTTACATGCAGTCTaGCACACCTCTGTACAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: PCEKSCYNIAPLLQFQRTFLHAV*HTSVQA Trigger: TGCCTGTACAGAGGTGTGGCAGACTGCATGTAAAAA...TGTTCTTTGAAATTGAAGCAAAGGTGCTATGTTATAGCAACTTTTCTCACATGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028220.10 |
||
| CDS-3UTR GCA 90 bp | ACTCAATATTCCACTCAGAAAGATAAATCCAAAAATGCAACCTCTCTTACACTGTTTTTACATGCAGTCTaGCACACCTCTGTACAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: TQYSTQKDKSKNATSLTLFLHAV*HTSVQA Trigger: TGCCTGTACAGAGGTGTGGCAGACTGCATGTAAAAA...CAGTGTAAGAGAGGTTGCATTTTTGGATTTATCTTTCTGAGTGGAATATTGAGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000028220.10 ENSMUST00000113077.8 ENSMUST00000113078.8 ENSMUST00000113080.9 |
||
| CDS-3UTR GCA 90 bp | ACTCAATATTCCACTCAGAAAGATAAATCCAAAAATGCAACCTCTCTTACACTGTCATGGTCCTCCAGTTaGTTCATCCTCAAAATAGCC | + |
|
Preference number: 4 (lower is better) Translates to: TQYSTQKDKSKNATSLTLSWSSS*FILKIA Trigger: GGCTATTTTGAGGATGAAGCAACTGGAGGACCATGA...CAGTGTAAGAGAGGTTGCATTTTTGGATTTATCTTTCTGAGTGGAATATTGAGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000028220.10 ENSMUST00000113077.8 ENSMUST00000113078.8 ENSMUST00000113080.9 |
||
| CDS-3UTR CCA 90 bp | GCTAGAGTAAGCAAAACAGAATGTCAGGAAGGGAAACAACACATTATTACTGTCAAAGTGCATACACTCTaGCACTATGTCCAATTAACG | + |
|
Preference number: 4 (lower is better) Translates to: ARVSKTECQEGKQHIITVKVHTL*HYVQLT Trigger: CGTTAATTGGACATAGTGCCAGAGTGTATGCACTTT...GACAGTAATAATGTGTTGTTTCCCTTCCTGACATTCTGTTTTGCTTACTCTAGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113075.8 |
||
| CDS-3UTR TCA 90 bp | CCATGTGAGAAAAGTTGCTATAACATAGCACCTTTGCTTCAATTTCAAAGAACACATGTGAGTAAAGTCTaGGGATCGAGCCATTTTAAC | + |
|
Preference number: 4 (lower is better) Translates to: PCEKSCYNIAPLLQFQRTHVSKV*GSSHFN Trigger: GTTAAAATGGCTCGATCCTCAGACTTTACTCACATG...TGTTCTTTGAAATTGAAGCAAAGGTGCTATGTTATAGCAACTTTTCTCACATGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028220.10 |
||
| CDS-3UTR TCA 90 bp | ACTCAATATTCCACTCAGAAAGATAAATCCAAAAATGCAACCTCTCTTACACTGCATGTGAGTAAAGTCTaGGGATCGAGCCATTTTAAC | + |
|
Preference number: 4 (lower is better) Translates to: TQYSTQKDKSKNATSLTLHVSKV*GSSHFN Trigger: GTTAAAATGGCTCGATCCTCAGACTTTACTCACATG...CAGTGTAAGAGAGGTTGCATTTTTGGATTTATCTTTCTGAGTGGAATATTGAGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000028220.10 ENSMUST00000113077.8 ENSMUST00000113078.8 ENSMUST00000113080.9 |
||
| CDS-3UTR TCA 90 bp | ATCATTTACCATGTGTTGGGCATAAAACTTCTAATTAACACAGAGCACATGCTGCAATTGGCCAAATCTTaGTCTCATATTTGTCTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: IIYHVLGIKLLINTEHMLQLAKS*SHICLH Trigger: GTGCAGACAAATATGAGATCAAGATTTGGCCAATTG...CAGCATGTGCTCTGTGTTAATTAGAAGTTTTATGCCCAACACATGGTAAATGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113075.8 |
||
| CDS-3UTR CCA 90 bp | ATCATTTACCATGTGTTGGGCATAAAACTTCTAATTAACACAGAGCACATGCTGCTCAGACTAATCAGGTaGTCCAGAGTTTCATTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: IIYHVLGIKLLINTEHMLLRLIR*SRVSFF Trigger: GAAAAATGAAACTCTGGACCACCTGATTAGTCTGAG...CAGCATGTGCTCTGTGTTAATTAGAAGTTTTATGCCCAACACATGGTAAATGAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113075.8 |
||
| CDS-3UTR CCA 90 bp | ATCATTTACCATGTGTTGGGCATAAAACTTCTAATTAACACAGAGCACATGCTGATCAAAATGAAGTCTTaGCTGCAGGCAGATACTTCT | + |
|
Preference number: 4 (lower is better) Translates to: IIYHVLGIKLLINTEHMLIKMKS*LQADTS Trigger: AGAAGTATCTGCCTGCAGCCAAGACTTCATTTTGAT...CAGCATGTGCTCTGTGTTAATTAGAAGTTTTATGCCCAACACATGGTAAATGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113075.8 |
||
| CDS-3UTR TCA 90 bp | CCATGTGAGAAAAGTTGCTATAACATAGCACCTTTGCTTCAATTTCAAAGAACATTAACAAATAAAAACTaGGCTCCAGGGGAAGGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: PCEKSCYNIAPLLQFQRTLTNKN*APGEGV Trigger: AACTCCTTCCCCTGGAGCTCAGTTTTTATTTGTTAA...TGTTCTTTGAAATTGAAGCAAAGGTGCTATGTTATAGCAACTTTTCTCACATGG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000028220.10 |
||
| CDS-3UTR TCA 90 bp | ACTCAATATTCCACTCAGAAAGATAAATCCAAAAATGCAACCTCTCTTACACTGCAATTGGCCAAATCTTaGTCTCATATTTGTCTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: TQYSTQKDKSKNATSLTLQLAKS*SHICLH Trigger: GTGCAGACAAATATGAGATCAAGATTTGGCCAATTG...CAGTGTAAGAGAGGTTGCATTTTTGGATTTATCTTTCTGAGTGGAATATTGAGT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000028220.10 ENSMUST00000091020.10 ENSMUST00000113077.8 ENSMUST00000113078.8 ENSMUST00000113080.9 |
||
| CDS-3UTR CCA 90 bp | ACTCAATATTCCACTCAGAAAGATAAATCCAAAAATGCAACCTCTCTTACACTGCTCAGACTAATCAGGTaGTCCAGAGTTTCATTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: TQYSTQKDKSKNATSLTLLRLIR*SRVSFF Trigger: GAAAAATGAAACTCTGGACCACCTGATTAGTCTGAG...CAGTGTAAGAGAGGTTGCATTTTTGGATTTATCTTTCTGAGTGGAATATTGAGT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000028220.10 ENSMUST00000113077.8 ENSMUST00000113078.8 ENSMUST00000113080.9 |
||
| CDS-3UTR CCA 90 bp | ACTCAATATTCCACTCAGAAAGATAAATCCAAAAATGCAACCTCTCTTACACTGAAAGTGCATACACTCTaGCACTATGTCCAATTAACG | + |
|
Preference number: 4 (lower is better) Translates to: TQYSTQKDKSKNATSLTLKVHTL*HYVQLT Trigger: CGTTAATTGGACATAGTGCCAGAGTGTATGCACTTT...CAGTGTAAGAGAGGTTGCATTTTTGGATTTATCTTTCTGAGTGGAATATTGAGT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000028220.10 ENSMUST00000091020.10 ENSMUST00000113077.8 ENSMUST00000113078.8 ENSMUST00000113080.9 |
||
| CDS-3UTR CCA 90 bp | ACTCAATATTCCACTCAGAAAGATAAATCCAAAAATGCAACCTCTCTTACACTGATCAAAATGAAGTCTTaGCTGCAGGCAGATACTTCT | + |
|
Preference number: 4 (lower is better) Translates to: TQYSTQKDKSKNATSLTLIKMKS*LQADTS Trigger: AGAAGTATCTGCCTGCAGCCAAGACTTCATTTTGAT...CAGTGTAAGAGAGGTTGCATTTTTGGATTTATCTTTCTGAGTGGAATATTGAGT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000028220.10 ENSMUST00000091020.10 ENSMUST00000113077.8 ENSMUST00000113078.8 ENSMUST00000113080.9 |
||
| CDS-3UTR GCA 90 bp | CCATGTGAGAAAAGTTGCTATAACATAGCACCTTTGCTTCAATTTCAAAGAACAAGAGTTTCATTTTTCTaGAAGTCCGTCAGAGAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: PCEKSCYNIAPLLQFQRTRVSFF*KSVRER Trigger: TCTTTCTCTGACGGACTTGCAGAAAAATGAAACTCT...TGTTCTTTGAAATTGAAGCAAAGGTGCTATGTTATAGCAACTTTTCTCACATGG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028220.10 |
||
| CDS-3UTR GCA 90 bp | ACTCAATATTCCACTCAGAAAGATAAATCCAAAAATGCAACCTCTCTTACACTGAGAGTTTCATTTTTCTaGAAGTCCGTCAGAGAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: TQYSTQKDKSKNATSLTLRVSFF*KSVRER Trigger: TCTTTCTCTGACGGACTTGCAGAAAAATGAAACTCT...CAGTGTAAGAGAGGTTGCATTTTTGGATTTATCTTTCTGAGTGGAATATTGAGT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000028220.10 ENSMUST00000113077.8 ENSMUST00000113078.8 ENSMUST00000113080.9 |
||
| CDS-3UTR GCA 90 bp | CCATGTGAGAAAAGTTGCTATAACATAGCACCTTTGCTTCAATTTCAAAGAACAATCTTTGTAGTAAAGTaGATACACTCTGGCACTATG | + |
|
Preference number: 4 (lower is better) Translates to: PCEKSCYNIAPLLQFQRTIFVVK*IHSGTM Trigger: CATAGTGCCAGAGTGTATGCACTTTACTACAAAGAT...TGTTCTTTGAAATTGAAGCAAAGGTGCTATGTTATAGCAACTTTTCTCACATGG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028220.10 |
||
| CDS-3UTR GCA 90 bp | ACTCAATATTCCACTCAGAAAGATAAATCCAAAAATGCAACCTCTCTTACACTGATCTTTGTAGTAAAGTaGATACACTCTGGCACTATG | + |
|
Preference number: 4 (lower is better) Translates to: TQYSTQKDKSKNATSLTLIFVVK*IHSGTM Trigger: CATAGTGCCAGAGTGTATGCACTTTACTACAAAGAT...CAGTGTAAGAGAGGTTGCATTTTTGGATTTATCTTTCTGAGTGGAATATTGAGT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000028220.10 ENSMUST00000091020.10 ENSMUST00000113077.8 ENSMUST00000113078.8 ENSMUST00000113080.9 |
||
| CDS-3UTR CCA 90 bp | CCATGTGAGAAAAGTTGCTATAACATAGCACCTTTGCTTCAATTTCAAAGAACAGATTTCTCTCCCAATTaGCCAAATCTTGATCTCATA | + |
|
Preference number: 4 (lower is better) Translates to: PCEKSCYNIAPLLQFQRTDFSPN*PNLDLI Trigger: TATGAGATCAAGATTTGGCCAATTGGGAGAGAAATC...TGTTCTTTGAAATTGAAGCAAAGGTGCTATGTTATAGCAACTTTTCTCACATGG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028220.10 |
||
| CDS-3UTR CAA 90 bp | CCCAAAACCCGCAGCCCTGGCACCCAAAGTCAGTCAGCGGTGGTAGCTCCTGGTCAGCAGGCCACAGTGTaGTCAAAGGAGCCTGTCACA | + |
|
Preference number: 5 (lower is better) Translates to: PKTRSPGTQSQSAVVAPGQQATV*SKEPVT Trigger: TGTGACAGGCTCCTTTGACAACACTGTGGCCTGCTG...ACCAGGAGCTACCACCGCTGACTGACTTTGGGTGCCAGGGCTGCGGGTTTTGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028220.10 ENSMUST00000091020.10 ENSMUST00000113078.8 ENSMUST00000113080.9 |
||
| CDS-3UTR CAA 90 bp | CCCAAAACCCGCAGCCCTGGCACCCAAAGTCAGTCAGCGGTGGTAGCTCCTGGTAGAGTCTCCAGGTTATaGGAGAGATGCCTGAGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: PKTRSPGTQSQSAVVAPGRVSRL*ERCLSW Trigger: CCAGCTCAGGCATCTCTCCAATAACCTGGAGACTCT...ACCAGGAGCTACCACCGCTGACTGACTTTGGGTGCCAGGGCTGCGGGTTTTGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028220.10 ENSMUST00000113077.8 ENSMUST00000113078.8 ENSMUST00000113080.9 |
||
| CDS-3UTR CAA 90 bp | CCCAAAACCCGCAGCCCTGGCACCCAAAGTCAGTCAGCGGTGGTAGCTCCTGGTTTGAGGAAGTCCCGCTaGAGGAGAGTCTCCAGGTTA | + |
|
Preference number: 5 (lower is better) Translates to: PKTRSPGTQSQSAVVAPGLRKSR*RRVSRL Trigger: TAACCTGGAGACTCTCCTCAAGCGGGACTTCCTCAA...ACCAGGAGCTACCACCGCTGACTGACTTTGGGTGCCAGGGCTGCGGGTTTTGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028220.10 ENSMUST00000113077.8 ENSMUST00000113078.8 ENSMUST00000113080.9 |
||
| CDS-3UTR CAA 90 bp | CCCAAAACCCGCAGCCCTGGCACCCAAAGTCAGTCAGCGGTGGTAGCTCCTGGTTTCTGCAAAACCACCTaGGTGACCCATTCAGTATGC | + |
|
Preference number: 5 (lower is better) Translates to: PKTRSPGTQSQSAVVAPGFCKTT*VTHSVC Trigger: GCATACTGAATGGGTCACCAAGGTGGTTTTGCAGAA...ACCAGGAGCTACCACCGCTGACTGACTTTGGGTGCCAGGGCTGCGGGTTTTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000028220.10 ENSMUST00000091020.10 ENSMUST00000113077.8 ENSMUST00000113078.8 ENSMUST00000113080.9 |
||
| CDS-3UTR CAA 90 bp | CCCAAAACCCGCAGCCCTGGCACCCAAAGTCAGTCAGCGGTGGTAGCTCCTGGTGCTACCTCAGGTGTCTaGATGACCCTGAGAATATCA | + |
|
Preference number: 5 (lower is better) Translates to: PKTRSPGTQSQSAVVAPGATSGV*MTLRIS Trigger: TGATATTCTCAGGGTCATCAAGACACCTGAGGTAGC...ACCAGGAGCTACCACCGCTGACTGACTTTGGGTGCCAGGGCTGCGGGTTTTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028220.10 ENSMUST00000091020.10 ENSMUST00000113077.8 ENSMUST00000113078.8 ENSMUST00000113080.9 |
||
| CDS-3UTR CAA 90 bp | CCCAAAACCCGCAGCCCTGGCACCCAAAGTCAGTCAGCGGTGGTAGCTCCTGGTTTCATGGTCCTCCAGTaGCTTCATCCTCAAAATAGC | + |
|
Preference number: 5 (lower is better) Translates to: PKTRSPGTQSQSAVVAPGFMVLQ*LHPQNS Trigger: GCTATTTTGAGGATGAAGCAACTGGAGGACCATGAA...ACCAGGAGCTACCACCGCTGACTGACTTTGGGTGCCAGGGCTGCGGGTTTTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000028220.10 ENSMUST00000113077.8 ENSMUST00000113078.8 ENSMUST00000113080.9 |
||
| CDS-3UTR CAA 90 bp | CCCAAAACCCGCAGCCCTGGCACCCAAAGTCAGTCAGCGGTGGTAGCTCCTGGTCATCAAAATGAAGTCTaGGCTGCAGGCAGATACTTC | + |
|
Preference number: 5 (lower is better) Translates to: PKTRSPGTQSQSAVVAPGHQNEV*AAGRYF Trigger: GAAGTATCTGCCTGCAGCCAAGACTTCATTTTGATG...ACCAGGAGCTACCACCGCTGACTGACTTTGGGTGCCAGGGCTGCGGGTTTTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000028220.10 ENSMUST00000091020.10 ENSMUST00000113077.8 ENSMUST00000113078.8 ENSMUST00000113080.9 |
||
| CDS-3UTR CAA 90 bp | CCCAAAACCCGCAGCCCTGGCACCCAAAGTCAGTCAGCGGTGGTAGCTCCTGGTTTCAAGCACTTACAGTaGATTTCTCTCCCAATTGGC | + |
|
Preference number: 5 (lower is better) Translates to: PKTRSPGTQSQSAVVAPGFKHLQ*ISLPIG Trigger: GCCAATTGGGAGAGAAATCAACTGTAAGTGCTTGAA...ACCAGGAGCTACCACCGCTGACTGACTTTGGGTGCCAGGGCTGCGGGTTTTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028220.10 ENSMUST00000091020.10 ENSMUST00000113077.8 ENSMUST00000113078.8 ENSMUST00000113080.9 |
||
| CDS-3UTR CAA 90 bp | AAAGTTACCATCACCACCACCACCCCACCACCCAGATTTGAATTTGACATTAGGTCCAGGGGAAGGAGTTaGAGGAAGTCCCGCTTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: KVTITTTTPPPRFEFDIRSRGRS*RKSRLR Trigger: CCTCAAGCGGGACTTCCTCAAACTCCTTCCCCTGGA...CCTAATGTCAAATTCAAATCTGGGTGGTGGGGTGGTGGTGGTGATGGTAACTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113075.8 |
||
| CDS GCA 90 bp | CTTGAGGAGAGTCTCCAGGTTATTGGAGAGATGCCTGAGCTGGACTaGCCCACTCAGACTAATCAGGTGGTCCAGAGTTTCATTTTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: LEESLQVIGEMPELD*PTQTNQVVQSFIFL Trigger: CAGAAAAATGAAACTCTGGACCACCTGATTAGTCTGAGTGGGGCAGTCCAGCTCAGGCATCTCTCCAATAACCTGGAGACTCTCCTCAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000028220.10 ENSMUST00000113075.8 ENSMUST00000113077.8 ENSMUST00000113078.8 ENSMUST00000113080.9 |
||
| CDS-3UTR CAA 90 bp | ATGAAGTCAATGGTGTATCCCATTAGCATGCTGCGGTGTATGTCAGTAAACAAGTCCAGGGGAAGGAGTTaGAGGAAGTCCCGCTTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: MKSMVYPISMLRCMSVNKSRGRS*RKSRLR Trigger: CCTCAAGCGGGACTTCCTCAAACTCCTTCCCCTGGA...CTTGTTTACTGACATACACCGCAGCATGCTAATGGGATACACCATTGACTTCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028220.10 ENSMUST00000113077.8 ENSMUST00000113078.8 ENSMUST00000113080.9 |
||
| CDS-3UTR CAA 90 bp | ATGAAGTCAATGGTGTATCCCATTAGCATGCTGCGGTGTATGTCAGTAAACAAGCAGCAGGCCACAGTGTaGTCAAAGGAGCCTGTCACA | + |
|
Preference number: 5 (lower is better) Translates to: MKSMVYPISMLRCMSVNKQQATV*SKEPVT Trigger: TGTGACAGGCTCCTTTGACAACACTGTGGCCTGCTG...CTTGTTTACTGACATACACCGCAGCATGCTAATGGGATACACCATTGACTTCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028220.10 ENSMUST00000091020.10 ENSMUST00000113078.8 ENSMUST00000113080.9 |
||
| CDS-3UTR CAA 90 bp | AGCAAAACAGAATGTCAGGAAGGGAAACAACACATTATTACTGTCAAACAGCAGCAGCAGGCCACAGTGTaGTCAAAGGAGCCTGTCACA | + |
|
Preference number: 5 (lower is better) Translates to: SKTECQEGKQHIITVKQQQQATV*SKEPVT Trigger: TGTGACAGGCTCCTTTGACAACACTGTGGCCTGCTG...CTGCTGTTTGACAGTAATAATGTGTTGTTTCCCTTCCTGACATTCTGTTTTGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113075.8 |
||
| CDS-3UTR CAA 90 bp | ACTCAATATTCCACTCAGAAAGATAAATCCAAAAATGCAACCTCTCTTACACTGTCCAGGGGAAGGAGTTaGAGGAAGTCCCGCTTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: TQYSTQKDKSKNATSLTLSRGRS*RKSRLR Trigger: CCTCAAGCGGGACTTCCTCAAACTCCTTCCCCTGGA...CAGTGTAAGAGAGGTTGCATTTTTGGATTTATCTTTCTGAGTGGAATATTGAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000028220.10 ENSMUST00000113077.8 ENSMUST00000113078.8 ENSMUST00000113080.9 |
||
| CDS-3UTR CAA 90 bp | AAACAGCAGAGTGTGGATAGAGAAGGCCTCCCATTACAACTTCTAGAAAACAGATTCTGCAAAACCACCTaGGTGACCCATTCAGTATGC | + |
|
Preference number: 5 (lower is better) Translates to: KQQSVDREGLPLQLLENRFCKTT*VTHSVC Trigger: GCATACTGAATGGGTCACCAAGGTGGTTTTGCAGAA...TCTGTTTTCTAGAAGTTGTAATGGGAGGCCTTCTCTATCCACACTCTGCTGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113075.8 |
||
| CDS-3UTR CAA 90 bp | ATGAAGTCAATGGTGTATCCCATTAGCATGCTGCGGTGTATGTCAGTAAACAAGGCTACCTCAGGTGTCTaGATGACCCTGAGAATATCA | + |
|
Preference number: 5 (lower is better) Translates to: MKSMVYPISMLRCMSVNKATSGV*MTLRIS Trigger: TGATATTCTCAGGGTCATCAAGACACCTGAGGTAGC...CTTGTTTACTGACATACACCGCAGCATGCTAATGGGATACACCATTGACTTCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000028220.10 ENSMUST00000091020.10 ENSMUST00000113077.8 ENSMUST00000113078.8 ENSMUST00000113080.9 |
||
| CDS CCA 90 bp | ACCCTGTACAGAGAAGTCCATCTTTGTAGTAAAGTGCATACACTCTaGCACTATGTCCAATTAACGAAGAGGTCTCAAAGGCTTCATGGT | + |
|
Preference number: 5 (lower is better) Translates to: TLYREVHLCSKVHTL*HYVQLTKRSQRLHG Trigger: ACCATGAAGCCTTTGAGACCTCTTCGTTAATTGGACATAGTGCCAGAGTGTATGCACTTTACTACAAAGATGGACTTCTCTGTACAGGGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000028220.10 ENSMUST00000091020.10 ENSMUST00000113075.8 ENSMUST00000113078.8 ENSMUST00000113080.9 |
||
| CDS-3UTR CAA 90 bp | ATCATTTACCATGTGTTGGGCATAAAACTTCTAATTAACACAGAGCACATGCTGAGAGTCTCCAGGTTATaGGAGAGATGCCTGAGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: IIYHVLGIKLLINTEHMLRVSRL*ERCLSW Trigger: CCAGCTCAGGCATCTCTCCAATAACCTGGAGACTCT...CAGCATGTGCTCTGTGTTAATTAGAAGTTTTATGCCCAACACATGGTAAATGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113075.8 |
||
| CDS-3UTR CAA 90 bp | ATCATTTACCATGTGTTGGGCATAAAACTTCTAATTAACACAGAGCACATGCTGTTGAGGAAGTCCCGCTaGAGGAGAGTCTCCAGGTTA | + |
|
Preference number: 5 (lower is better) Translates to: IIYHVLGIKLLINTEHMLLRKSR*RRVSRL Trigger: TAACCTGGAGACTCTCCTCAAGCGGGACTTCCTCAA...CAGCATGTGCTCTGTGTTAATTAGAAGTTTTATGCCCAACACATGGTAAATGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113075.8 |
||
| CDS-3UTR CAA 90 bp | ATGAAGTCAATGGTGTATCCCATTAGCATGCTGCGGTGTATGTCAGTAAACAAGTTCATGGTCCTCCAGTaGCTTCATCCTCAAAATAGC | + |
|
Preference number: 5 (lower is better) Translates to: MKSMVYPISMLRCMSVNKFMVLQ*LHPQNS Trigger: GCTATTTTGAGGATGAAGCAACTGGAGGACCATGAA...CTTGTTTACTGACATACACCGCAGCATGCTAATGGGATACACCATTGACTTCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028220.10 ENSMUST00000113077.8 ENSMUST00000113078.8 ENSMUST00000113080.9 |
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| CDS CCA 90 bp | ACACTGTACAGAGAAGTCCATCTTTGTAGTAAAGTGCATACACTCTaGCACTATGTCCAATTAACGAAGAGGTCTCAAAGGCTTCATGGT | + |
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Preference number: 5 (lower is better) Translates to: TLYREVHLCSKVHTL*HYVQLTKRSQRLHG Trigger: ACCATGAAGCCTTTGAGACCTCTTCGTTAATTGGACATAGTGCCAGAGTGTATGCACTTTACTACAAAGATGGACTTCTCTGTACAGTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113077.8 |
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| CDS-3UTR CAA 90 bp | ACTCAATATTCCACTCAGAAAGATAAATCCAAAAATGCAACCTCTCTTACACTGTTGAGGAAGTCCCGCTaGAGGAGAGTCTCCAGGTTA | + |
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Preference number: 5 (lower is better) Translates to: TQYSTQKDKSKNATSLTLLRKSR*RRVSRL Trigger: TAACCTGGAGACTCTCCTCAAGCGGGACTTCCTCAA...CAGTGTAAGAGAGGTTGCATTTTTGGATTTATCTTTCTGAGTGGAATATTGAGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000028220.10 ENSMUST00000113077.8 ENSMUST00000113078.8 ENSMUST00000113080.9 |
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| CDS-3UTR CAA 90 bp | AGGAAGGGAAACAACACATTATTACTGTCAAACAGCAGAGTGTGGATAGAGAAGTTCATGGTCCTCCAGTaGCTTCATCCTCAAAATAGC | + |
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Preference number: 5 (lower is better) Translates to: RKGNNTLLLSNSRVWIEKFMVLQ*LHPQNS Trigger: GCTATTTTGAGGATGAAGCAACTGGAGGACCATGAA...CTTCTCTATCCACACTCTGCTGTTTGACAGTAATAATGTGTTGTTTCCCTTCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113075.8 |
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| CDS-3UTR CAA 90 bp | AGGAAGGGAAACAACACATTATTACTGTCAAACAGCAGAGTGTGGATAGAGAAGTTCAAGCACTTACAGTaGATTTCTCTCCCAATTGGC | + |
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Preference number: 5 (lower is better) Translates to: RKGNNTLLLSNSRVWIEKFKHLQ*ISLPIG Trigger: GCCAATTGGGAGAGAAATCAACTGTAAGTGCTTGAA...CTTCTCTATCCACACTCTGCTGTTTGACAGTAATAATGTGTTGTTTCCCTTCCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113075.8 |
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| CDS-3UTR CAA 90 bp | GCTAGAGTAAGCAAAACAGAATGTCAGGAAGGGAAACAACACATTATTACTGTCCATCAAAATGAAGTCTaGGCTGCAGGCAGATACTTC | + |
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Preference number: 5 (lower is better) Translates to: ARVSKTECQEGKQHIITVHQNEV*AAGRYF Trigger: GAAGTATCTGCCTGCAGCCAAGACTTCATTTTGATG...GACAGTAATAATGTGTTGTTTCCCTTCCTGACATTCTGTTTTGCTTACTCTAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113075.8 |
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| CDS-3UTR CAA 90 bp | CCATGTGAGAAAAGTTGCTATAACATAGCACCTTTGCTTCAATTTCAAAGAACATTCTGCAAAACCACCTaGGTGACCCATTCAGTATGC | + |
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Preference number: 5 (lower is better) Translates to: PCEKSCYNIAPLLQFQRTFCKTT*VTHSVC Trigger: GCATACTGAATGGGTCACCAAGGTGGTTTTGCAGAA...TGTTCTTTGAAATTGAAGCAAAGGTGCTATGTTATAGCAACTTTTCTCACATGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028220.10 |
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| CDS-3UTR CAA 90 bp | ACTCAATATTCCACTCAGAAAGATAAATCCAAAAATGCAACCTCTCTTACACTGTTCTGCAAAACCACCTaGGTGACCCATTCAGTATGC | + |
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Preference number: 5 (lower is better) Translates to: TQYSTQKDKSKNATSLTLFCKTT*VTHSVC Trigger: GCATACTGAATGGGTCACCAAGGTGGTTTTGCAGAA...CAGTGTAAGAGAGGTTGCATTTTTGGATTTATCTTTCTGAGTGGAATATTGAGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000028220.10 ENSMUST00000091020.10 ENSMUST00000113077.8 ENSMUST00000113078.8 ENSMUST00000113080.9 |
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| CDS TCA 90 bp | CTTCATCCTCAAAATAGCCTTCAAATAAACCTTCTTCCAGTGCAATaGGTCCTGAACAGAATCATCTATCTGCCAGCCCAAATTTTTACA | + |
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Preference number: 5 (lower is better) Translates to: LHPQNSLQINLLPVQ*VLNRIIYLPAQIFT Trigger: TGTAAAAATTTGGGCTGGCAGATAGATGATTCTGTTCAGGACTCATTGCACTGGAAGAAGGTTTATTTGAAGGCTATTTTGAGGATGAAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000028220.10 ENSMUST00000113075.8 ENSMUST00000113077.8 ENSMUST00000113078.8 ENSMUST00000113080.9 |
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| CDS-3UTR CAA 90 bp | ACTCAATATTCCACTCAGAAAGATAAATCCAAAAATGCAACCTCTCTTACACTGTTCATGGTCCTCCAGTaGCTTCATCCTCAAAATAGC | + |
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Preference number: 5 (lower is better) Translates to: TQYSTQKDKSKNATSLTLFMVLQ*LHPQNS Trigger: GCTATTTTGAGGATGAAGCAACTGGAGGACCATGAA...CAGTGTAAGAGAGGTTGCATTTTTGGATTTATCTTTCTGAGTGGAATATTGAGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000028220.10 ENSMUST00000113077.8 ENSMUST00000113078.8 ENSMUST00000113080.9 |
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| CDS-3UTR CAA 90 bp | CCATGTGAGAAAAGTTGCTATAACATAGCACCTTTGCTTCAATTTCAAAGAACATTCAAGCACTTACAGTaGATTTCTCTCCCAATTGGC | + |
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Preference number: 5 (lower is better) Translates to: PCEKSCYNIAPLLQFQRTFKHLQ*ISLPIG Trigger: GCCAATTGGGAGAGAAATCAACTGTAAGTGCTTGAA...TGTTCTTTGAAATTGAAGCAAAGGTGCTATGTTATAGCAACTTTTCTCACATGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028220.10 |
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| CDS-3UTR CAA 90 bp | ACTCAATATTCCACTCAGAAAGATAAATCCAAAAATGCAACCTCTCTTACACTGTTCAAGCACTTACAGTaGATTTCTCTCCCAATTGGC | + |
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Preference number: 5 (lower is better) Translates to: TQYSTQKDKSKNATSLTLFKHLQ*ISLPIG Trigger: GCCAATTGGGAGAGAAATCAACTGTAAGTGCTTGAA...CAGTGTAAGAGAGGTTGCATTTTTGGATTTATCTTTCTGAGTGGAATATTGAGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000028220.10 ENSMUST00000091020.10 ENSMUST00000113077.8 ENSMUST00000113078.8 ENSMUST00000113080.9 |
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| CDS CAA 72 bp | TTGAGGAAGTCCCGCTTGAGGAGAGTCTCCAGGTTATaGGAGAGATGCCTGAGCTGGACTGCCCCACTCAGA | + |
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Preference number: 6 (lower is better) Translates to: LRKSRLRRVSRL*ERCLSWTAPLR Trigger: TCTGAGTGGGGCAGTCCAGCTCAGGCATCTCTCCAATAACCTGGAGACTCTCCTCAAGCGGGACTTCCTCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028220.10 ENSMUST00000113075.8 ENSMUST00000113077.8 ENSMUST00000113078.8 ENSMUST00000113080.9 |
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| CDS CAA 72 bp | CTGAGCTCCAGGGGAAGGAGTTTGAGGAAGTCCCGCTaGAGGAGAGTCTCCAGGTTATTGGAGAGATGCCTG | + |
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Preference number: 6 (lower is better) Translates to: LSSRGRSLRKSR*RRVSRLLERCL Trigger: CAGGCATCTCTCCAATAACCTGGAGACTCTCCTCAAGCGGGACTTCCTCAAACTCCTTCCCCTGGAGCTCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028220.10 ENSMUST00000113075.8 ENSMUST00000113077.8 ENSMUST00000113078.8 ENSMUST00000113080.9 |
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| CDS CAA 90 bp | GGAAGGAGTTTGAGGAAGTCCCGCTTGAGGAGAGTCTCCAGGTTATaGGAGAGATGCCTGAGCTGGACTGCCCCACTCAGACTAATCAGG | + |
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Preference number: 6 (lower is better) Translates to: GRSLRKSRLRRVSRL*ERCLSWTAPLRLIR Trigger: CCTGATTAGTCTGAGTGGGGCAGTCCAGCTCAGGCATCTCTCCAATAACCTGGAGACTCTCCTCAAGCGGGACTTCCTCAAACTCCTTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028220.10 ENSMUST00000113075.8 ENSMUST00000113077.8 ENSMUST00000113078.8 ENSMUST00000113080.9 |
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| CDS GCA 72 bp | AGTCTCCAGGTTATTGGAGAGATGCCTGAGCTGGACTaGCCCACTCAGACTAATCAGGTGGTCCAGAGTTTC | + |
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Preference number: 6 (lower is better) Translates to: SLQVIGEMPELD*PTQTNQVVQSF Trigger: GAAACTCTGGACCACCTGATTAGTCTGAGTGGGGCAGTCCAGCTCAGGCATCTCTCCAATAACCTGGAGACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000028220.10 ENSMUST00000113075.8 ENSMUST00000113077.8 ENSMUST00000113078.8 ENSMUST00000113080.9 |
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| CDS GCA 72 bp | TCATCTATCTGCCAGCCCAAATTTTTACATGCAGTCTaGCACACCTCTGTACAGGCACTTATCACCTTATTC | + |
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Preference number: 6 (lower is better) Translates to: SSICQPKFLHAV*HTSVQALITLF Trigger: GAATAAGGTGATAAGTGCCTGTACAGAGGTGTGGCAGACTGCATGTAAAAATTTGGGCTGGCAGATAGATGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000028220.10 ENSMUST00000113075.8 ENSMUST00000113077.8 ENSMUST00000113078.8 ENSMUST00000113080.9 |
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| CDS CCA 72 bp | CTATGTCCAATTAACGAAGAGGTCTCAAAGGCTTCATaGTCCTCCAGTTGCTTCATCCTCAAAATAGCCTTC | + |
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Preference number: 6 (lower is better) Translates to: LCPINEEVSKAS*SSSCFILKIAF Trigger: GAAGGCTATTTTGAGGATGAAGCAACTGGAGGACCATGAAGCCTTTGAGACCTCTTCGTTAATTGGACATAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028220.10 ENSMUST00000113075.8 ENSMUST00000113077.8 ENSMUST00000113078.8 ENSMUST00000113080.9 |
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| CDS TCA 72 bp | CAAAATAGCCTTCAAATAAACCTTCTTCCAGTGCAATaGGTCCTGAACAGAATCATCTATCTGCCAGCCCAA | + |
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Preference number: 6 (lower is better) Translates to: QNSLQINLLPVQ*VLNRIIYLPAQ Trigger: TTGGGCTGGCAGATAGATGATTCTGTTCAGGACTCATTGCACTGGAAGAAGGTTTATTTGAAGGCTATTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028220.10 ENSMUST00000113075.8 ENSMUST00000113077.8 ENSMUST00000113078.8 ENSMUST00000113080.9 |
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| CDS CCA 72 bp | AGAGAAGTCCATCTTTGTAGTAAAGTGCATACACTCTaGCACTATGTCCAATTAACGAAGAGGTCTCAAAGG | + |
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Preference number: 6 (lower is better) Translates to: REVHLCSKVHTL*HYVQLTKRSQR Trigger: CCTTTGAGACCTCTTCGTTAATTGGACATAGTGCCAGAGTGTATGCACTTTACTACAAAGATGGACTTCTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000028220.10 ENSMUST00000091020.10 ENSMUST00000113075.8 ENSMUST00000113077.8 ENSMUST00000113078.8 ENSMUST00000113080.9 |
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