Pregenerated sensors for FBXW15 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000074060Ensembl transcript IDs: ENSMUST00000056745.12, ENSMUST00000198112.2, ENSMUST00000198397.5
Found 61 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR CCA 90 bp | CCTGGGCTTGCAAATAGGCCTTTATTATCTTTGAGGAAGAGGATACACAACCCACATGTCTCTTTGCCCTaGAGCTGCAGGGTATCCATG | + |
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Preference number: 4 (lower is better) Translates to: PGLANRPLLSLRKRIHNPHVSLP*SCRVSM Trigger: CATGGATACCCTGCAGCTCCAGGGCAAAGAGACATG...TGGGTTGTGTATCCTCTTCCTCAAAGATAATAAAGGCCTATTTGCAAGCCCAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056745.12 |
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| CDS-3UTR TCA 90 bp | CCTGGGCTTGCAAATAGGCCTTTATTATCTTTGAGGAAGAGGATACACAACCCAAGGGGCAGAGAATTCTaGTGTCCTCAGAAAGCTGCT | + |
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Preference number: 4 (lower is better) Translates to: PGLANRPLLSLRKRIHNPRGREF*CPQKAA Trigger: AGCAGCTTTCTGAGGACATCAGAATTCTCTGCCCCT...TGGGTTGTGTATCCTCTTCCTCAAAGATAATAAAGGCCTATTTGCAAGCCCAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056745.12 |
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| CDS-3UTR TCA 90 bp | CCTGGGCTTGCAAATAGGCCTTTATTATCTTTGAGGAAGAGGATACACAACCCAGATGTTCAAGGCATATaGAGTCAGAGAGCTGAGGCT | + |
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Preference number: 4 (lower is better) Translates to: PGLANRPLLSLRKRIHNPDVQGI*SQRAEA Trigger: AGCCTCAGCTCTCTGACTTCATATGCCTTGAACATC...TGGGTTGTGTATCCTCTTCCTCAAAGATAATAAAGGCCTATTTGCAAGCCCAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056745.12 |
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| CDS-3UTR CCA 90 bp | CCTGGGCTTGCAAATAGGCCTTTATTATCTTTGAGGAAGAGGATACACAACCCAACTTGCCGGCTGTTCTaGGCTTTTCCAGGTTATAAC | + |
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Preference number: 4 (lower is better) Translates to: PGLANRPLLSLRKRIHNPTCRLF*AFPGYN Trigger: GTTATAACCTGGAAAAGCCCAGAACAGCCGGCAAGT...TGGGTTGTGTATCCTCTTCCTCAAAGATAATAAAGGCCTATTTGCAAGCCCAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056745.12 |
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| CDS-3UTR CCA 90 bp | CCTGGGCTTGCAAATAGGCCTTTATTATCTTTGAGGAAGAGGATACACAACCCACCTGTCTTCCCTTCTTaGTGTCCAGAAGACTCTTTC | + |
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Preference number: 4 (lower is better) Translates to: PGLANRPLLSLRKRIHNPPVFPS*CPEDSF Trigger: GAAAGAGTCTTCTGGACACCAAGAAGGGAAGACAGG...TGGGTTGTGTATCCTCTTCCTCAAAGATAATAAAGGCCTATTTGCAAGCCCAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056745.12 |
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| CDS-3UTR CCA 90 bp | CCTGGGCTTGCAAATAGGCCTTTATTATCTTTGAGGAAGAGGATACACAACCCAAATGAAGCCGTACAGTaGCAGAGGTCTCTCAATGTG | + |
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Preference number: 4 (lower is better) Translates to: PGLANRPLLSLRKRIHNPNEAVQ*QRSLNV Trigger: CACATTGAGAGACCTCTGCCACTGTACGGCTTCATT...TGGGTTGTGTATCCTCTTCCTCAAAGATAATAAAGGCCTATTTGCAAGCCCAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056745.12 |
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| CDS-3UTR GCA 90 bp | CCTGGGCTTGCAAATAGGCCTTTATTATCTTTGAGGAAGAGGATACACAACCCACGATCAATGAAGAACTaGTTCCATGTCTCTTTGCCC | + |
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Preference number: 4 (lower is better) Translates to: PGLANRPLLSLRKRIHNPRSMKN*FHVSLP Trigger: GGGCAAAGAGACATGGAAGCAGTTCTTCATTGATCG...TGGGTTGTGTATCCTCTTCCTCAAAGATAATAAAGGCCTATTTGCAAGCCCAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056745.12 |
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| CDS-3UTR TCA 90 bp | CCTGGGCTTGCAAATAGGCCTTTATTATCTTTGAGGAAGAGGATACACAACCCAATTTCTGGGCAGTACTaGAATGTCTTTAGACGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: PGLANRPLLSLRKRIHNPISGQY*NVFRRR Trigger: TCTCCGTCTAAAGACATTTCAGTACTGCCCAGAAAT...TGGGTTGTGTATCCTCTTCCTCAAAGATAATAAAGGCCTATTTGCAAGCCCAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056745.12 |
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| CDS-3UTR GCA 90 bp | CCTGGGCTTGCAAATAGGCCTTTATTATCTTTGAGGAAGAGGATACACAACCCAGTAAGTGAAATCTTTTaGCTTTGCACGGAACTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: PGLANRPLLSLRKRIHNPVSEIF*LCTELG Trigger: GCCAAGTTCCGTGCAAAGGCAAAAGATTTCACTTAC...TGGGTTGTGTATCCTCTTCCTCAAAGATAATAAAGGCCTATTTGCAAGCCCAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056745.12 |
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| CDS-3UTR GCA 90 bp | CTTGCAAATAGGCCTTTATTATCTTTGAGGAAGAGGATACACAACCCATTCAGTGCTTCTCTCCTCCCATaGATACACATCCATAGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: LANRPLLSLRKRIHNPFSASLLP*IHIHRA Trigger: GGCTCTATGGATGTGTATGCATGGGAGGAGAGAAGC...ACTGAATGGGTTGTGTATCCTCTTCCTCAAAGATAATAAAGGCCTATTTGCAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056745.12 |
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| CDS-3UTR TCA 90 bp | CCTGGGCTTGCAAATAGGCCTTTATTATCTTTGAGGAAGAGGATACACAACCCAGAGAGAGGATTCAGTTaGACAAACAATCACGTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: PGLANRPLLSLRKRIHNPERGFS*TNNHVL Trigger: AAGAACGTGATTGTTTGTTCAACTGAATCCTCTCTC...TGGGTTGTGTATCCTCTTCCTCAAAGATAATAAAGGCCTATTTGCAAGCCCAGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056745.12 |
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| CDS-3UTR GCA 90 bp | CTTGCAAATAGGCCTTTATTATCTTTGAGGAAGAGGATACACAACCCATTCAGTTCCACAGGACATCACTaGTGGCAAGTTCATTCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: LANRPLLSLRKRIHNPFSSTGHH*WQVHSS Trigger: ACTGGAATGAACTTGCCAGCAGTGATGTCCTGTGGA...ACTGAATGGGTTGTGTATCCTCTTCCTCAAAGATAATAAAGGCCTATTTGCAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056745.12 |
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| CDS-3UTR GCA 90 bp | GGGCTTGCAAATAGGCCTTTATTATCTTTGAGGAAGAGGATACACAACCCATTCCAGCTTTCAGTGATTTaGATGGAGACTTCAGGTTGT | + |
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Preference number: 4 (lower is better) Translates to: GLANRPLLSLRKRIHNPFQLSVI*METSGC Trigger: ACAACCTGAAGTCTCCATGCAAATCACTGAAAGCTG...GAATGGGTTGTGTATCCTCTTCCTCAAAGATAATAAAGGCCTATTTGCAAGCCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056745.12 |
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| CDS-3UTR GCA 90 bp | CCTGGGCTTGCAAATAGGCCTTTATTATCTTTGAGGAAGAGGATACACAACCCAGCTCACATCATCACATaGTGCTTTATAAATGAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: PGLANRPLLSLRKRIHNPAHIIT*CFINEA Trigger: GGCTTCATTTATAAAGCAGCATGTGATGATGTGAGC...TGGGTTGTGTATCCTCTTCCTCAAAGATAATAAAGGCCTATTTGCAAGCCCAGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056745.12 |
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| CDS-3UTR CCA 90 bp | CCTGGGCTTGCAAATAGGCCTTTATTATCTTTGAGGAAGAGGATACACAACCCAGGAATCCTAAAGATGTaGATGTTACCCAAGGTATCA | + |
|
Preference number: 4 (lower is better) Translates to: PGLANRPLLSLRKRIHNPGILKM*MLPKVS Trigger: TGATACCTTGGGTAACATCCACATCTTTAGGATTCC...TGGGTTGTGTATCCTCTTCCTCAAAGATAATAAAGGCCTATTTGCAAGCCCAGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056745.12 |
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| CDS-3UTR TCA 90 bp | GGGCTTGCAAATAGGCCTTTATTATCTTTGAGGAAGAGGATACACAACCCATTCATGTTTCAAACATTTTaGCTTGGGGGAAACCACTTC | + |
|
Preference number: 4 (lower is better) Translates to: GLANRPLLSLRKRIHNPFMFQTF*LGGNHF Trigger: GAAGTGGTTTCCCCCAAGTCAAAATGTTTGAAACAT...GAATGGGTTGTGTATCCTCTTCCTCAAAGATAATAAAGGCCTATTTGCAAGCCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056745.12 |
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| CDS-3UTR CCA 90 bp | CCTGGGCTTGCAAATAGGCCTTTATTATCTTTGAGGAAGAGGATACACAACCCATGTGAACATCCCAGGTaGAAATTGTATTCTTGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: PGLANRPLLSLRKRIHNPCEHPR*KLYSWN Trigger: ATTCCAAGAATACAATTTCCACCTGGGATGTTCACA...TGGGTTGTGTATCCTCTTCCTCAAAGATAATAAAGGCCTATTTGCAAGCCCAGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056745.12 |
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| CDS-3UTR CCA 90 bp | CCTGGGCTTGCAAATAGGCCTTTATTATCTTTGAGGAAGAGGATACACAACCCATCCATCAAAACCATATaGCAATACATTGACTGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: PGLANRPLLSLRKRIHNPSIKTI*QYIDCG Trigger: TCCACAGTCAATGTATTGCCATATGGTTTTGATGGA...TGGGTTGTGTATCCTCTTCCTCAAAGATAATAAAGGCCTATTTGCAAGCCCAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056745.12 |
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| CDS-3UTR TCA 90 bp | CTTGCAAATAGGCCTTTATTATCTTTGAGGAAGAGGATACACAACCCATTCAGTAAAGACAGCTTTCAGTaGTTTGCATGGAGACTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: LANRPLLSLRKRIHNPFSKDSFQ*FAWRLQ Trigger: CTGAAGTCTCCATGCAAATCACTGAAAGCTGTCTTT...ACTGAATGGGTTGTGTATCCTCTTCCTCAAAGATAATAAAGGCCTATTTGCAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056745.12 |
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| CDS-3UTR CCA 90 bp | CTTGCAAATAGGCCTTTATTATCTTTGAGGAAGAGGATACACAACCCATTCAGTTTTCACGATCATTTCTaGGCAGTACTGAAATGTCTT | + |
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Preference number: 4 (lower is better) Translates to: LANRPLLSLRKRIHNPFSFHDHF*AVLKCL Trigger: AAGACATTTCAGTACTGCCCAGAAATGATCGTGAAA...ACTGAATGGGTTGTGTATCCTCTTCCTCAAAGATAATAAAGGCCTATTTGCAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056745.12 |
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| CDS GCA 90 bp | GACTGCAATGTGCATCTCAGGGAGGGTAGTCAACAGCTTGATACTTaGCGGCTGTTCTGGGCTTTTCCAGGTTATAACGCTCTTTGCACG | + |
|
Preference number: 5 (lower is better) Translates to: DCNVHLREGSQQLDT*RLFWAFPGYNALCT Trigger: CGTGCAAAGAGCGTTATAACCTGGAAAAGCCCAGAACAGCCGGCAAGTATCAAGCTGTTGACTACCCTCCCTGAGATGCACATTGCAGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198112.2 |
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| CDS TCA 90 bp | CGCTCTTTGCACGGAACTTGGCACGTTCTTGCCATATTCGATCAATaGAGAACTGCTTCCATGTCTCTTTGCCCTGGAGCTGCAGGGTAT | + |
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Preference number: 5 (lower is better) Translates to: RSLHGTWHVLAIFDQ*RTASMSLCPGAAGY Trigger: ATACCCTGCAGCTCCAGGGCAAAGAGACATGGAAGCAGTTCTTCATTGATCGAATATGGCAAGAACGTGCCAAGTTCCGTGCAAAGAGCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198112.2 |
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| CDS GCA 90 bp | GCACGGAACTTGGCACGTTCTTGCCATATTCGATCAATGAAGAACTaGTTCCATGTCTCTTTGCCCTGGAGCTGCAGGGTATCCATGTCA | + |
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Preference number: 5 (lower is better) Translates to: ARNLARSCHIRSMKN*FHVSLPWSCRVSMS Trigger: TGACATGGATACCCTGCAGCTCCAGGGCAAAGAGACATGGAAGCAGTTCTTCATTGATCGAATATGGCAAGAACGTGCCAAGTTCCGTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056745.12 ENSMUST00000198112.2 ENSMUST00000198397.5 |
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| CDS GCA 90 bp | GACTGCAATGTGCATCTCAGGGAGGGTAGTCAACAGCTTGATACTTaGCGGCTGTTCTGGGCTTTTCCAGGTTATAACGCTCTTGTGAAC | + |
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Preference number: 5 (lower is better) Translates to: DCNVHLREGSQQLDT*RLFWAFPGYNALVN Trigger: GTTCACAAGAGCGTTATAACCTGGAAAAGCCCAGAACAGCCGGCAAGTATCAAGCTGTTGACTACCCTCCCTGAGATGCACATTGCAGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056745.12 ENSMUST00000198397.5 |
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| CDS CCA 90 bp | AGAGCCATCTCTTCTGACACAATTTCCTCCACAGGACATCACTGCTaGCAAGTTCATTCCAGTCCTTGTTCACTTGGGCAGCCTGTAGCA | + |
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Preference number: 5 (lower is better) Translates to: RAISSDTISSTGHHC*QVHSSPCSLGQPVA Trigger: TGCTACAGGCTGCCCAAGTGAACAAGGACTGGAATGAACTTGCCAGCAGTGATGTCCTGTGGAGGAAATTGTGTCAGAAGAGATGGCTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056745.12 ENSMUST00000198112.2 ENSMUST00000198397.5 |
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| CDS TCA 90 bp | TTGCCTTTGCACGGAACTTGGCACGTTCTTGCCATATTCGATCAATaGAGAACTGCTTCCATGTCTCTTTGCCCTGGAGCTGCAGGGTAT | + |
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Preference number: 5 (lower is better) Translates to: LPLHGTWHVLAIFDQ*RTASMSLCPGAAGY Trigger: ATACCCTGCAGCTCCAGGGCAAAGAGACATGGAAGCAGTTCTTCATTGATCGAATATGGCAAGAACGTGCCAAGTTCCGTGCAAAGGCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056745.12 ENSMUST00000198397.5 |
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| CDS GCA 90 bp | GATACTTGCCGGCTGTTCTGGGCTTTTCCAGGTTATAACGCTCTTTaGACGGAACTTGGCACGTTCTTGCCATATTCGATCAATGAAGAA | + |
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Preference number: 5 (lower is better) Translates to: DTCRLFWAFPGYNAL*TELGTFLPYSINEE Trigger: TTCTTCATTGATCGAATATGGCAAGAACGTGCCAAGTTCCGTGCAAAGAGCGTTATAACCTGGAAAAGCCCAGAACAGCCGGCAAGTATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198112.2 |
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| CDS TCA 90 bp | ATACTTGCCGGCTGTTCTGGGCTTTTCCAGGTTATAACGCTCTTGTaGACATCCCAGGTGGAAATTGTATTCTTGGAATTCACCATACAG | + |
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Preference number: 5 (lower is better) Translates to: ILAGCSGLFQVITLL*TSQVEIVFLEFTIQ Trigger: CTGTATGGTGAATTCCAAGAATACAATTTCCACCTGGGATGTTCACAAGAGCGTTATAACCTGGAAAAGCCCAGAACAGCCGGCAAGTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056745.12 ENSMUST00000198397.5 |
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| CDS CCA 90 bp | CCAAACTCTTCCAGCTTGATATCATATGTTTCAAACATTTTGACTTaGGGGAAACCACTTCTGGACATCAGGGTTATCCTGTCTTCCCTT | + |
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Preference number: 5 (lower is better) Translates to: PNSSSLISYVSNILT*GKPLLDIRVILSSL Trigger: AAGGGAAGACAGGATAACCCTGATGTCCAGAAGTGGTTTCCCCCAAGTCAAAATGTTTGAAACATATGATATCAAGCTGGAAGAGTTTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056745.12 |
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| CDS-3UTR CAA 90 bp | CCTGGGCTTGCAAATAGGCCTTTATTATCTTTGAGGAAGAGGATACACAACCCACCTTTAACAATTCTTTaGTTCCCAAACTCTTCCAGC | + |
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Preference number: 5 (lower is better) Translates to: PGLANRPLLSLRKRIHNPPLTIL*FPNSSS Trigger: GCTGGAAGAGTTTGGGAACAAAAGAATTGTTAAAGG...TGGGTTGTGTATCCTCTTCCTCAAAGATAATAAAGGCCTATTTGCAAGCCCAGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056745.12 |
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| CDS-3UTR CAA 90 bp | CCTGGGCTTGCAAATAGGCCTTTATTATCTTTGAGGAAGAGGATACACAACCCAGTGGAAATTGTATTCTaGGAATTCACCATACAGACA | + |
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Preference number: 5 (lower is better) Translates to: PGLANRPLLSLRKRIHNPVEIVF*EFTIQT Trigger: TGTCTGTATGGTGAATTCCAAGAATACAATTTCCAC...TGGGTTGTGTATCCTCTTCCTCAAAGATAATAAAGGCCTATTTGCAAGCCCAGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056745.12 |
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| CDS-3UTR CAA 90 bp | CCTGGGCTTGCAAATAGGCCTTTATTATCTTTGAGGAAGAGGATACACAACCCATATGTTTCAAACATTTaGACTTGGGGGAAACCACTT | + |
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Preference number: 5 (lower is better) Translates to: PGLANRPLLSLRKRIHNPYVSNI*TWGKPL Trigger: AAGTGGTTTCCCCCAAGTCAAAATGTTTGAAACATA...TGGGTTGTGTATCCTCTTCCTCAAAGATAATAAAGGCCTATTTGCAAGCCCAGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056745.12 |
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| CDS-3UTR CAA 90 bp | CTTGCAAATAGGCCTTTATTATCTTTGAGGAAGAGGATACACAACCCATTCAGTCATCCCAGGTGGAAATaGTATTCTTGGAATTCACCA | + |
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Preference number: 5 (lower is better) Translates to: LANRPLLSLRKRIHNPFSHPRWK*YSWNSP Trigger: TGGTGAATTCCAAGAATACAATTTCCACCTGGGATG...ACTGAATGGGTTGTGTATCCTCTTCCTCAAAGATAATAAAGGCCTATTTGCAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056745.12 |
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| CDS-3UTR CAA 90 bp | GGGCTTGCAAATAGGCCTTTATTATCTTTGAGGAAGAGGATACACAACCCATTCTCATGTAAAACACCTTaGGCAAAATATGTGGGTGTT | + |
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Preference number: 5 (lower is better) Translates to: GLANRPLLSLRKRIHNPFSCKTP*AKYVGV Trigger: AACACCCACATATTTTGCCAAAGGTGTTTTACATGA...GAATGGGTTGTGTATCCTCTTCCTCAAAGATAATAAAGGCCTATTTGCAAGCCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056745.12 |
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| CDS TCA 90 bp | ATCACGTTCTTATCACTGACTCCAAACCTCTGTGGGTTCACCTTGTaGCATTGTAACTCGAAGCTTGCTATCAATTTTCCTTTAACAATT | + |
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Preference number: 5 (lower is better) Translates to: ITFLSLTPNLCGFTL*HCNSKLAINFPLTI Trigger: AATTGTTAAAGGAAAATTGATAGCAAGCTTCGAGTTACAATGTCACAAGGTGAACCCACAGAGGTTTGGAGTCAGTGATAAGAACGTGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056745.12 |
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| CDS-3UTR CAA 90 bp | CTTGCAAATAGGCCTTTATTATCTTTGAGGAAGAGGATACACAACCCATTCAGTCCATATGGCAATACATaGACTGTGGAAATGAGGTAT | + |
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Preference number: 5 (lower is better) Translates to: LANRPLLSLRKRIHNPFSPYGNT*TVEMRY Trigger: ATACCTCATTTCCACAGTCAATGTATTGCCATATGG...ACTGAATGGGTTGTGTATCCTCTTCCTCAAAGATAATAAAGGCCTATTTGCAAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056745.12 |
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| CDS-3UTR CAA 90 bp | CTTGCAAATAGGCCTTTATTATCTTTGAGGAAGAGGATACACAACCCATTCAGTTCATATAAGGATAATTaGAGAACGGTAGACACAGGG | + |
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Preference number: 5 (lower is better) Translates to: LANRPLLSLRKRIHNPFSSYKDN*RTVDTG Trigger: CCCTGTGTCTACCGTTCTCAAATTATCCTTATATGA...ACTGAATGGGTTGTGTATCCTCTTCCTCAAAGATAATAAAGGCCTATTTGCAAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056745.12 |
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| CDS-3UTR CAA 90 bp | CTTGCAAATAGGCCTTTATTATCTTTGAGGAAGAGGATACACAACCCATTCAGTCCAAACTCTTCCAGCTaGATATCATATGTTTCAAAC | + |
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Preference number: 5 (lower is better) Translates to: LANRPLLSLRKRIHNPFSPNSSS*ISYVSN Trigger: GTTTGAAACATATGATATCAAGCTGGAAGAGTTTGG...ACTGAATGGGTTGTGTATCCTCTTCCTCAAAGATAATAAAGGCCTATTTGCAAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056745.12 |
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| CDS CAA 72 bp | ACTGCAATGTGCATCTCAGGGAGGGTAGTCAACAGCTaGATACTTGCCGGCTGTTCTGGGCTTTTCCAGGTT | + |
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Preference number: 6 (lower is better) Translates to: TAMCISGRVVNS*ILAGCSGLFQV Trigger: AACCTGGAAAAGCCCAGAACAGCCGGCAAGTATCAAGCTGTTGACTACCCTCCCTGAGATGCACATTGCAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056745.12 ENSMUST00000198112.2 ENSMUST00000198397.5 |
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| CDS CAA 90 bp | TCTACAGTGACTGCAATGTGCATCTCAGGGAGGGTAGTCAACAGCTaGATACTTGCCGGCTGTTCTGGGCTTTTCCAGGTTATAACGCTC | + |
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Preference number: 6 (lower is better) Translates to: STVTAMCISGRVVNS*ILAGCSGLFQVITL Trigger: GAGCGTTATAACCTGGAAAAGCCCAGAACAGCCGGCAAGTATCAAGCTGTTGACTACCCTCCCTGAGATGCACATTGCAGTCACTGTAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056745.12 ENSMUST00000198112.2 ENSMUST00000198397.5 |
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| CDS TCA 72 bp | CACGGAACTTGGCACGTTCTTGCCATATTCGATCAATaGAGAACTGCTTCCATGTCTCTTTGCCCTGGAGCT | + |
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Preference number: 6 (lower is better) Translates to: HGTWHVLAIFDQ*RTASMSLCPGA Trigger: AGCTCCAGGGCAAAGAGACATGGAAGCAGTTCTTCATTGATCGAATATGGCAAGAACGTGCCAAGTTCCGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056745.12 ENSMUST00000198112.2 ENSMUST00000198397.5 |
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| CDS CCA 72 bp | TCTTCTGACACAATTTCCTCCACAGGACATCACTGCTaGCAAGTTCATTCCAGTCCTTGTTCACTTGGGCAG | + |
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Preference number: 6 (lower is better) Translates to: SSDTISSTGHHC*QVHSSPCSLGQ Trigger: CTGCCCAAGTGAACAAGGACTGGAATGAACTTGCCAGCAGTGATGTCCTGTGGAGGAAATTGTGTCAGAAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056745.12 ENSMUST00000198112.2 ENSMUST00000198397.5 |
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| CDS TCA 72 bp | GACAATTGGGCCATCCTTGGTAAAGACAGCTTTCAGTaGTTTGCATGGAGACTTCAGGTTGTTAGTCGCCAG | + |
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Preference number: 6 (lower is better) Translates to: DNWAILGKDSFQ*FAWRLQVVSRQ Trigger: CTGGCGACTAACAACCTGAAGTCTCCATGCAAATCACTGAAAGCTGTCTTTACCAAGGATGGCCCAATTGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056745.12 ENSMUST00000198112.2 ENSMUST00000198397.5 |
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| CDS CAA 72 bp | CCCAAGGTATCACCTATCAAGACAATTGGGCCATCCTaGGTAAAGACAGCTTTCAGTGATTTGCATGGAGAC | + |
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Preference number: 6 (lower is better) Translates to: PKVSPIKTIGPS*VKTAFSDLHGD Trigger: GTCTCCATGCAAATCACTGAAAGCTGTCTTTACCAAGGATGGCCCAATTGTCTTGATAGGTGATACCTTGGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056745.12 ENSMUST00000198112.2 |
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| CDS CAA 90 bp | TGGATGTTACCCAAGGTATCACCTATCAAGACAATTGGGCCATCCTaGGTAAAGACAGCTTTCAGTGATTTGCATGGAGACTTCAGGTTG | + |
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Preference number: 6 (lower is better) Translates to: WMLPKVSPIKTIGPS*VKTAFSDLHGDFRL Trigger: CAACCTGAAGTCTCCATGCAAATCACTGAAAGCTGTCTTTACCAAGGATGGCCCAATTGTCTTGATAGGTGATACCTTGGGTAACATCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056745.12 ENSMUST00000198112.2 |
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| CDS TCA 72 bp | GGCTGTTCTGGGCTTTTCCAGGTTATAACGCTCTTGTaGACATCCCAGGTGGAAATTGTATTCTTGGAATTC | + |
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Preference number: 6 (lower is better) Translates to: GCSGLFQVITLL*TSQVEIVFLEF Trigger: GAATTCCAAGAATACAATTTCCACCTGGGATGTTCACAAGAGCGTTATAACCTGGAAAAGCCCAGAACAGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056745.12 ENSMUST00000198397.5 |
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| CDS CAA 90 bp | CCCAAACTCTTCCAGCTTGATATCATATGTTTCAAACATTTTGACTaGGGGGAAACCACTTCTGGACATCAGGGTTATCCTGTCTTCCCT | + |
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Preference number: 6 (lower is better) Translates to: PKLFQLDIICFKHFD*GETTSGHQGYPVFP Trigger: AGGGAAGACAGGATAACCCTGATGTCCAGAAGTGGTTTCCCCCAAGTCAAAATGTTTGAAACATATGATATCAAGCTGGAAGAGTTTGGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056745.12 |
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| CDS TCA 72 bp | AGCTTCCCTGTTGTGACAGTCCCACAGTTTGATAGTTaGTTGAATATCTACAGTGACTGCAATGTGCATCTC | + |
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Preference number: 6 (lower is better) Translates to: SFPVVTVPQFDS*LNIYSDCNVHL Trigger: GAGATGCACATTGCAGTCACTGTAGATATTCAATCAACTATCAAACTGTGGGACTGTCACAACAGGGAAGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056745.12 ENSMUST00000198112.2 ENSMUST00000198397.5 |
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| CDS TCA 72 bp | TCCACACTGAGTTTCACGATCATTTCTGGGCAGTACTaGAATGTCTTTAGACGGAGACCATTTATGTCGAAG | + |
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Preference number: 6 (lower is better) Translates to: STLSFTIISGQY*NVFRRRPFMSK Trigger: CTTCGACATAAATGGTCTCCGTCTAAAGACATTTCAGTACTGCCCAGAAATGATCGTGAAACTCAGTGTGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056745.12 |
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| CDS TCA 72 bp | GAATTATGCTCACATCATCACATGCTGCTTTATAAATaGAGCCGTACAGTGGCAGAGGTCTCTCAATGTGCA | + |
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Preference number: 6 (lower is better) Translates to: ELCSHHHMLLYK*SRTVAEVSQCA Trigger: TGCACATTGAGAGACCTCTGCCACTGTACGGCTTCATTTATAAAGCAGCATGTGATGATGTGAGCATAATTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056745.12 ENSMUST00000198397.5 |
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| CDS TCA 72 bp | TTATCACTGACTCCAAACCTCTGTGGGTTCACCTTGTaGCATTGTAACTCGAAGCTTGCTATCAATTTTCCT | + |
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Preference number: 6 (lower is better) Translates to: LSLTPNLCGFTL*HCNSKLAINFP Trigger: AGGAAAATTGATAGCAAGCTTCGAGTTACAATGTCACAAGGTGAACCCACAGAGGTTTGGAGTCAGTGATAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056745.12 |
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| CDS TCA 72 bp | AGGATTCAGTTGAACAAACAATCACGTTCTTATCACTaGCTCCAAACCTCTGTGGGTTCACCTTGTGACATT | + |
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Preference number: 6 (lower is better) Translates to: RIQLNKQSRSYH*LQTSVGSPCDI Trigger: AATGTCACAAGGTGAACCCACAGAGGTTTGGAGTCAGTGATAAGAACGTGATTGTTTGTTCAACTGAATCCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056745.12 |
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| CDS CAA 72 bp | CTTGGTGTCCAGAAGACTCTTTCATATAAGGATAATTaGAGAACGGTAGACACAGGGGCAGAGAATTCTGAT | + |
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Preference number: 6 (lower is better) Translates to: LGVQKTLSYKDN*RTVDTGAENSD Trigger: ATCAGAATTCTCTGCCCCTGTGTCTACCGTTCTCAAATTATCCTTATATGAAAGAGTCTTCTGGACACCAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056745.12 ENSMUST00000198112.2 |
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| CDS CAA 90 bp | TTGTTCCCAAACTCTTCCAGCTTGATATCATATGTTTCAAACATTTaGACTTGGGGGAAACCACTTCTGGACATCAGGGTTATCCTGTCT | + |
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Preference number: 6 (lower is better) Translates to: LFPNSSSLISYVSNI*TWGKPLLDIRVILS Trigger: AGACAGGATAACCCTGATGTCCAGAAGTGGTTTCCCCCAAGTCAAAATGTTTGAAACATATGATATCAAGCTGGAAGAGTTTGGGAACAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056745.12 |
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| CDS CAA 90 bp | CAGAGAATTCTGATGTCCTCAGAAAGCTGCTCATGTAAAACACCTTaGGCAAAATATGTGGGTGTTTCTTACTCAGTAAGACCCATTTCT | + |
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Preference number: 6 (lower is better) Translates to: QRILMSSESCSCKTP*AKYVGVSYSVRPIS Trigger: AGAAATGGGTCTTACTGAGTAAGAAACACCCACATATTTTGCCAAAGGTGTTTTACATGAGCAGCTTTCTGAGGACATCAGAATTCTCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056745.12 ENSMUST00000198112.2 |
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| CDS GCA 72 bp | TGTAATCAACTGAATTATGCTCACATCATCACATGCTaGTTTATAAATGAAGCCGTACAGTGGCAGAGGTCT | + |
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Preference number: 6 (lower is better) Translates to: CNQLNYAHIITC*FINEAVQWQRS Trigger: AGACCTCTGCCACTGTACGGCTTCATTTATAAAGCAGCATGTGATGATGTGAGCATAATTCAGTTGATTACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056745.12 ENSMUST00000198397.5 |
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| CDS CAA 72 bp | CTGATGTCCTCAGAAAGCTGCTCATGTAAAACACCTTaGGCAAAATATGTGGGTGTTTCTTACTCAGTAAGA | + |
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Preference number: 6 (lower is better) Translates to: LMSSESCSCKTP*AKYVGVSYSVR Trigger: TCTTACTGAGTAAGAAACACCCACATATTTTGCCAAAGGTGTTTTACATGAGCAGCTTTCTGAGGACATCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056745.12 ENSMUST00000198112.2 |
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| CDS CAA 72 bp | TTCCAGCTTGATATCATATGTTTCAAACATTTTGACTaGGGGGAAACCACTTCTGGACATCAGGGTTATCCT | + |
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Preference number: 6 (lower is better) Translates to: FQLDIICFKHFD*GETTSGHQGYP Trigger: AGGATAACCCTGATGTCCAGAAGTGGTTTCCCCCAAGTCAAAATGTTTGAAACATATGATATCAAGCTGGAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056745.12 |
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| CDS CAA 72 bp | AACTCTTCCAGCTTGATATCATATGTTTCAAACATTTaGACTTGGGGGAAACCACTTCTGGACATCAGGGTT | + |
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Preference number: 6 (lower is better) Translates to: NSSSLISYVSNI*TWGKPLLDIRV Trigger: AACCCTGATGTCCAGAAGTGGTTTCCCCCAAGTCAAAATGTTTGAAACATATGATATCAAGCTGGAAGAGTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056745.12 |
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| CDS TCA 72 bp | ACCATTTATGTCGAAGAGCAAGAGAGAGGATTCAGTTaGACAAACAATCACGTTCTTATCACTGACTCCAAA | + |
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Preference number: 6 (lower is better) Translates to: TIYVEEQERGFS*TNNHVLITDSK Trigger: TTTGGAGTCAGTGATAAGAACGTGATTGTTTGTTCAACTGAATCCTCTCTCTTGCTCTTCGACATAAATGGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056745.12 |
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| CDS CCA 72 bp | GTGGAAATGAGGTATAAATCTGGAATCCTAAAGATGTaGATGTTACCCAAGGTATCACCTATCAAGACAATT | + |
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Preference number: 6 (lower is better) Translates to: VEMRYKSGILKM*MLPKVSPIKTI Trigger: AATTGTCTTGATAGGTGATACCTTGGGTAACATCCACATCTTTAGGATTCCAGATTTATACCTCATTTCCAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056745.12 ENSMUST00000198112.2 |
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