Pregenerated sensors for FBXO9 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000001366Ensembl transcript IDs: ENSMUST00000001402.14, ENSMUST00000085311.13, ENSMUST00000159099.8, ENSMUST00000162625.2
Found 131 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | CTCTGGCTGATGCGCACAGTGGCACCGAGTTCCTCCAGCTTCCCAAGGGCTTCAAACACCTGCATGCCCTaGTCTGTTGTTTCAGATTCT | + |
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Preference number: 2 (lower is better) Translates to: LWLMRTVAPSSSSFPRASNTCMP*SVVSDS Trigger: AGAATCTGAAACAACAGACCAGGGCATGCAGGTGTT...TGAAGCCCTTGGGAAGCTGGAGGAACTCGGTGCCACTGTGCGCATCAGCCAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159099.8 |
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| 3UTR-3UTR GCA 90 bp | AGGCACAAGGCAGTGGATGTGACAGATCTGCTCAGAAACCTGCTTGAAAACATGCTATGCTTCTGCTCATaGAGCAGTGACATGCTGGTG | + |
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Preference number: 2 (lower is better) Translates to: RHKAVDVTDLLRNLLENMLCFCS*SSDMLV Trigger: CACCAGCATGTCACTGCTGCATGAGCAGAAGCATAG...CATGTTTTCAAGCAGGTTTCTGAGCAGATCTGTCACATCCACTGCCTTGTGCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001402.14 ENSMUST00000085311.13 |
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| 3UTR-3UTR GCA 90 bp | TATATGAACATGCTAACTCCTGAGCATTCAGCCTCATCAGGACCACTGCACACTTCCCAAACACCTGCATaGCCTGGTCTGTTGTTTCAG | + |
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Preference number: 2 (lower is better) Translates to: YMNMLTPEHSASSGPLHTSQTPA*PGLLFQ Trigger: CTGAAACAACAGACCAGGGCATGCAGGTGTTTGGGA...AGTGTGCAGTGGTCCTGATGAGGCTGAATGCTCAGGAGTTAGCATGTTCATATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159099.8 |
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| 3UTR TCA 72 bp | TGGCACCGAGTTCCTCCAGCTTCCCAAGGGCTTCAGTaGAAAAAGTATGGCGTCCCAAACACCTGCATGCCC | + |
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Preference number: 3 (lower is better) Translates to: WHRVPPASQGLQ*KKYGVPNTCMP Trigger: GGGCATGCAGGTGTTTGGGACGCCATACTTTTTTCACTGAAGCCCTTGGGAAGCTGGAGGAACTCGGTGCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000159099.8 |
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| 3UTR TCA 72 bp | AAACACCTGCATGCCCTGGTCTGTTGTTTCAGATTCTaGATAGCACAGGCTTACATCGCCAGCTGTTTCTAT | + |
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Preference number: 3 (lower is better) Translates to: KHLHALVCCFRF*IAQAYIASCFY Trigger: ATAGAAACAGCTGGCGATGTAAGCCTGTGCTATTCAGAATCTGAAACAACAGACCAGGGCATGCAGGTGTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159099.8 |
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| CDS-3UTR TCA 90 bp | GGTGTCCCAGCGCTCTATGCTTCTGCTCATGCAGCAGTGACATGCTGGTGTGGCGGCCGAGTTTCTCCATaGCTGGAGCCTACACCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: GVPALYASAHAAVTCWCGGRVSP*LEPTPG Trigger: CCCAGGTGTAGGCTCCAGTCATGGAGAAACTCGGCC...GCCACACCAGCATGTCACTGCTGCATGAGCAGAAGCATAGAGCGCTGGGACACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001402.14 ENSMUST00000085311.13 |
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| CDS-3UTR TCA 90 bp | GCTGATGCGCACAGTGGCACCGAGTTCCTCCAGCTTCCCAAGGGCTTCAGTGAAGGCCGAGTTTCTCCATaGCTGGAGCCTACACCTGGG | + |
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Preference number: 4 (lower is better) Translates to: ADAHSGTEFLQLPKGFSEGRVSP*LEPTPG Trigger: CCCAGGTGTAGGCTCCAGTCATGGAGAAACTCGGCC...TTCACTGAAGCCCTTGGGAAGCTGGAGGAACTCGGTGCCACTGTGCGCATCAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159099.8 |
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| CDS-3UTR CCA 90 bp | GGTGTCCCAGCGCTCTATGCTTCTGCTCATGCAGCAGTGACATGCTGGTGTGGCACCTCTGGTGGCCACTaGAGCACAGCTGCAGTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: GVPALYASAHAAVTCWCGTSGGH*STAAVP Trigger: TGGGACTGCAGCTGTGCTCCAGTGGCCACCAGAGGT...GCCACACCAGCATGTCACTGCTGCATGAGCAGAAGCATAGAGCGCTGGGACACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001402.14 ENSMUST00000085311.13 |
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| CDS-3UTR GCA 90 bp | ACACTCTGGCTGATGCGCACAGTGGCACCGAGTTCCTCCAGCTTCCCAAGGGCTTCTTCCTCCACTGCCTaGAGGAAGAGTTCTCGAGCC | + |
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Preference number: 4 (lower is better) Translates to: TLWLMRTVAPSSSSFPRASSSTA*RKSSRA Trigger: GGCTCGAGAACTCTTCCTGCAGGCAGTGGAGGAAGA...AGCCCTTGGGAAGCTGGAGGAACTCGGTGCCACTGTGCGCATCAGCCAGAGTGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159099.8 |
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| CDS-3UTR GCA 90 bp | GGTGTCCCAGCGCTCTATGCTTCTGCTCATGCAGCAGTGACATGCTGGTGTGGCCCACTGGAGCACAGCTaGAGTCCCACATGGAAGCTG | + |
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Preference number: 4 (lower is better) Translates to: GVPALYASAHAAVTCWCGPLEHS*SPTWKL Trigger: CAGCTTCCATGTGGGACTGCAGCTGTGCTCCAGTGG...GCCACACCAGCATGTCACTGCTGCATGAGCAGAAGCATAGAGCGCTGGGACACC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001402.14 ENSMUST00000085311.13 |
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| CDS-3UTR TCA 90 bp | GGTGTCCCAGCGCTCTATGCTTCTGCTCATGCAGCAGTGACATGCTGGTGTGGCCAGGCTGACAGAGTTTaGGCACAGACTCCTGCAACG | + |
|
Preference number: 4 (lower is better) Translates to: GVPALYASAHAAVTCWCGQADRV*AQTPAT Trigger: CGTTGCAGGAGTCTGTGCTCAAACTCTGTCAGCCTG...GCCACACCAGCATGTCACTGCTGCATGAGCAGAAGCATAGAGCGCTGGGACACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001402.14 ENSMUST00000085311.13 |
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| CDS-3UTR TCA 90 bp | GCTGATGCGCACAGTGGCACCGAGTTCCTCCAGCTTCCCAAGGGCTTCAGTGAACCAAGGGTTTCTGAGTaGCAACAGCCAAGGAGCCAC | + |
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Preference number: 4 (lower is better) Translates to: ADAHSGTEFLQLPKGFSEPRVSE*QQPRSH Trigger: GTGGCTCCTTGGCTGTTGTCACTCAGAAACCCTTGG...TTCACTGAAGCCCTTGGGAAGCTGGAGGAACTCGGTGCCACTGTGCGCATCAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159099.8 |
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| CDS-3UTR GCA 90 bp | GGTGTCCCAGCGCTCTATGCTTCTGCTCATGCAGCAGTGACATGCTGGTGTGGCTTGAGCACAGACTCCTaGAACGTGAGCTGCTGCTGG | + |
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Preference number: 4 (lower is better) Translates to: GVPALYASAHAAVTCWCGLSTDS*NVSCCW Trigger: CCAGCAGCAGCTCACGTTGCAGGAGTCTGTGCTCAA...GCCACACCAGCATGTCACTGCTGCATGAGCAGAAGCATAGAGCGCTGGGACACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001402.14 ENSMUST00000085311.13 |
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| CDS-3UTR CCA 90 bp | GGTGTCCCAGCGCTCTATGCTTCTGCTCATGCAGCAGTGACATGCTGGTGTGGCGAGGCTCCTCGGGGGTaGTTAACATCATCACATGGC | + |
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Preference number: 4 (lower is better) Translates to: GVPALYASAHAAVTCWCGEAPRG*LTSSHG Trigger: GCCATGTGATGATGTTAACCACCCCCGAGGAGCCTC...GCCACACCAGCATGTCACTGCTGCATGAGCAGAAGCATAGAGCGCTGGGACACC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001402.14 ENSMUST00000085311.13 |
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| CDS-3UTR CCA 90 bp | GGTGTCCCAGCGCTCTATGCTTCTGCTCATGCAGCAGTGACATGCTGGTGTGGCCCGTTCTGGTGTTCCTaGTTCTTAACCGGGGAACGA | + |
|
Preference number: 4 (lower is better) Translates to: GVPALYASAHAAVTCWCGPFWCS*FLTGER Trigger: TCGTTCCCCGGTTAAGAACCAGGAACACCAGAACGG...GCCACACCAGCATGTCACTGCTGCATGAGCAGAAGCATAGAGCGCTGGGACACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001402.14 ENSMUST00000085311.13 |
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| CDS-3UTR GCA 90 bp | GGTGTCCCAGCGCTCTATGCTTCTGCTCATGCAGCAGTGACATGCTGGTGTGGCATGGAACGAGCTTCATaGAGCTTCTGCCCCACACTT | + |
|
Preference number: 4 (lower is better) Translates to: GVPALYASAHAAVTCWCGMERAS*SFCPTL Trigger: AAGTGTGGGGCAGAAGCTGCATGAAGCTCGTTCCAT...GCCACACCAGCATGTCACTGCTGCATGAGCAGAAGCATAGAGCGCTGGGACACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001402.14 ENSMUST00000085311.13 |
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| CDS-3UTR GCA 90 bp | ACACTCTGGCTGATGCGCACAGTGGCACCGAGTTCCTCCAGCTTCCCAAGGGCTAGCCTTTTCTTCCTTTaGCAGTTCCTGTCGTCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: TLWLMRTVAPSSSSFPRASLFFL*QFLSSF Trigger: AAAGGACGACAGGAACTGGCAAAGGAAGAAAAGGCT...AGCCCTTGGGAAGCTGGAGGAACTCGGTGCCACTGTGCGCATCAGCCAGAGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159099.8 |
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| CDS-3UTR TCA 90 bp | GGTGTCCCAGCGCTCTATGCTTCTGCTCATGCAGCAGTGACATGCTGGTGTGGCGCAAAGACTTTGGTCTaGTTGTCTGCATCTTGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: GVPALYASAHAAVTCWCGAKTLV*LSASCD Trigger: GTCACAAGATGCAGACAATCAGACCAAAGTCTTTGC...GCCACACCAGCATGTCACTGCTGCATGAGCAGAAGCATAGAGCGCTGGGACACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001402.14 ENSMUST00000085311.13 |
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| CDS-3UTR TCA 90 bp | GGTGTCCCAGCGCTCTATGCTTCTGCTCATGCAGCAGTGACATGCTGGTGTGGCCAGTTGCTTTGTAAGTaGTGTGACAAGAGTGGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: GVPALYASAHAAVTCWCGQLLCK*CDKSGG Trigger: TCCACCACTCTTGTCACATCACTTACAAAGCAACTG...GCCACACCAGCATGTCACTGCTGCATGAGCAGAAGCATAGAGCGCTGGGACACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001402.14 ENSMUST00000085311.13 |
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| CDS-3UTR TCA 90 bp | AGGCACAAGGCAGTGGATGTGACAGATCTGCTCAGAAACCTGCTTGAAAACATGCAGACTCCTGCAACGTaGGCTGCTGCTGGAAGTACG | + |
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Preference number: 4 (lower is better) Translates to: RHKAVDVTDLLRNLLENMQTPAT*AAAGST Trigger: CGTACTTCCAGCAGCAGCTCACGTTGCAGGAGTCTG...CATGTTTTCAAGCAGGTTTCTGAGCAGATCTGTCACATCCACTGCCTTGTGCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001402.14 ENSMUST00000085311.13 |
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| CDS-3UTR TCA 90 bp | TCCCAAACACCTGCATGCCCTGGTCTGTTGTTTCAGATTCTGAATAGCACAGGCCAGGCTGACAGAGTTTaGGCACAGACTCCTGCAACG | + |
|
Preference number: 4 (lower is better) Translates to: SQTPACPGLLFQILNSTGQADRV*AQTPAT Trigger: CGTTGCAGGAGTCTGTGCTCAAACTCTGTCAGCCTG...GCCTGTGCTATTCAGAATCTGAAACAACAGACCAGGGCATGCAGGTGTTTGGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159099.8 |
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| CDS-3UTR GCA 90 bp | CTCAGGCACAAGGCAGTGGATGTGACAGATCTGCTCAGAAACCTGCTTGAAAACTCTTCCTCCACTGCCTaGAGGAAGAGTTCTCGAGCC | + |
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Preference number: 4 (lower is better) Translates to: LRHKAVDVTDLLRNLLENSSSTA*RKSSRA Trigger: GGCTCGAGAACTCTTCCTGCAGGCAGTGGAGGAAGA...GTTTTCAAGCAGGTTTCTGAGCAGATCTGTCACATCCACTGCCTTGTGCCTGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001402.14 ENSMUST00000085311.13 |
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| CDS-3UTR GCA 90 bp | CTCAGGCACAAGGCAGTGGATGTGACAGATCTGCTCAGAAACCTGCTTGAAAACTTGAGCACAGACTCCTaGAACGTGAGCTGCTGCTGG | + |
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Preference number: 4 (lower is better) Translates to: LRHKAVDVTDLLRNLLENLSTDS*NVSCCW Trigger: CCAGCAGCAGCTCACGTTGCAGGAGTCTGTGCTCAA...GTTTTCAAGCAGGTTTCTGAGCAGATCTGTCACATCCACTGCCTTGTGCCTGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001402.14 ENSMUST00000085311.13 |
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| CDS-3UTR CCA 90 bp | CTCAGGCACAAGGCAGTGGATGTGACAGATCTGCTCAGAAACCTGCTTGAAAACGAGGCTCCTCGGGGGTaGTTAACATCATCACATGGC | + |
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Preference number: 4 (lower is better) Translates to: LRHKAVDVTDLLRNLLENEAPRG*LTSSHG Trigger: GCCATGTGATGATGTTAACCACCCCCGAGGAGCCTC...GTTTTCAAGCAGGTTTCTGAGCAGATCTGTCACATCCACTGCCTTGTGCCTGAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001402.14 ENSMUST00000085311.13 |
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| CDS-3UTR CCA 90 bp | CTCAGGCACAAGGCAGTGGATGTGACAGATCTGCTCAGAAACCTGCTTGAAAACTTGTTGAACCTCTGGTaGCCACTGGAGCACAGCTGC | + |
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Preference number: 4 (lower is better) Translates to: LRHKAVDVTDLLRNLLENLLNLW*PLEHSC Trigger: GCAGCTGTGCTCCAGTGGCCACCAGAGGTTCAACAA...GTTTTCAAGCAGGTTTCTGAGCAGATCTGTCACATCCACTGCCTTGTGCCTGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001402.14 ENSMUST00000085311.13 |
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| CDS-3UTR TCA 90 bp | TATATGAACATGCTAACTCCTGAGCATTCAGCCTCATCAGGACCACTGCACACTCAGACTCCTGCAACGTaGGCTGCTGCTGGAAGTACG | + |
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Preference number: 4 (lower is better) Translates to: YMNMLTPEHSASSGPLHTQTPAT*AAAGST Trigger: CGTACTTCCAGCAGCAGCTCACGTTGCAGGAGTCTG...AGTGTGCAGTGGTCCTGATGAGGCTGAATGCTCAGGAGTTAGCATGTTCATATA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159099.8 |
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| CDS-3UTR TCA 90 bp | AGGCACAAGGCAGTGGATGTGACAGATCTGCTCAGAAACCTGCTTGAAAACATGCAGGCTGACAGAGTTTaGGCACAGACTCCTGCAACG | + |
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Preference number: 4 (lower is better) Translates to: RHKAVDVTDLLRNLLENMQADRV*AQTPAT Trigger: CGTTGCAGGAGTCTGTGCTCAAACTCTGTCAGCCTG...CATGTTTTCAAGCAGGTTTCTGAGCAGATCTGTCACATCCACTGCCTTGTGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001402.14 ENSMUST00000085311.13 |
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| CDS-3UTR TCA 90 bp | TCCCAAACACCTGCATGCCCTGGTCTGTTGTTTCAGATTCTGAATAGCACAGGCCCAAGGAGCCACACCTaGTATGTGAGTCTGACTGGT | + |
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Preference number: 4 (lower is better) Translates to: SQTPACPGLLFQILNSTGPRSHT*YVSLTG Trigger: ACCAGTCAGACTCACATATCAGGTGTGGCTCCTTGG...GCCTGTGCTATTCAGAATCTGAAACAACAGACCAGGGCATGCAGGTGTTTGGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159099.8 |
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| CDS-3UTR GCA 90 bp | AGGCACAAGGCAGTGGATGTGACAGATCTGCTCAGAAACCTGCTTGAAAACATGCTGAACATCTGGAGCTaGGCCTGCAGGTCTCTCTCA | + |
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Preference number: 4 (lower is better) Translates to: RHKAVDVTDLLRNLLENMLNIWS*ACRSLS Trigger: TGAGAGAGACCTGCAGGCGCAGCTCCAGATGTTCAG...CATGTTTTCAAGCAGGTTTCTGAGCAGATCTGTCACATCCACTGCCTTGTGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001402.14 ENSMUST00000085311.13 |
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| CDS-3UTR GCA 90 bp | AGGCACAAGGCAGTGGATGTGACAGATCTGCTCAGAAACCTGCTTGAAAACATGTCTTCCTCCACTGCCTaGAGGAAGAGTTCTCGAGCC | + |
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Preference number: 4 (lower is better) Translates to: RHKAVDVTDLLRNLLENMSSSTA*RKSSRA Trigger: GGCTCGAGAACTCTTCCTGCAGGCAGTGGAGGAAGA...CATGTTTTCAAGCAGGTTTCTGAGCAGATCTGTCACATCCACTGCCTTGTGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001402.14 ENSMUST00000085311.13 |
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| CDS-3UTR CCA 90 bp | TCTACATGCGTGTGTCTATGTACATATAACTTAGGTGTCCCAGCGCTCTATGCTACCTCTGGTGGCCACTaGAGCACAGCTGCAGTCCCA | + |
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Preference number: 4 (lower is better) Translates to: STCVCLCTYNLGVPALYATSGGH*STAAVP Trigger: TGGGACTGCAGCTGTGCTCCAGTGGCCACCAGAGGT...AGCATAGAGCGCTGGGACACCTAAGTTATATGTACATAGACACACGCATGTAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001402.14 ENSMUST00000085311.13 |
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| CDS-3UTR CCA 90 bp | CTCAGGCACAAGGCAGTGGATGTGACAGATCTGCTCAGAAACCTGCTTGAAAACAGTTTGTTGAACCTCTaGTGGCCACTGGAGCACAGC | + |
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Preference number: 4 (lower is better) Translates to: LRHKAVDVTDLLRNLLENSLLNL*WPLEHS Trigger: GCTGTGCTCCAGTGGCCACCAGAGGTTCAACAAACT...GTTTTCAAGCAGGTTTCTGAGCAGATCTGTCACATCCACTGCCTTGTGCCTGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001402.14 ENSMUST00000085311.13 |
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| CDS-3UTR TCA 90 bp | CTCAGGCACAAGGCAGTGGATGTGACAGATCTGCTCAGAAACCTGCTTGAAAACGAGGTCCAAGTCACTTaGTACCACCCATCGGAAGAT | + |
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Preference number: 4 (lower is better) Translates to: LRHKAVDVTDLLRNLLENEVQVT*YHPSED Trigger: ATCTTCCGATGGGTGGTATCAAGTGACTTGGACCTC...GTTTTCAAGCAGGTTTCTGAGCAGATCTGTCACATCCACTGCCTTGTGCCTGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001402.14 ENSMUST00000085311.13 |
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| CDS-3UTR GCA 90 bp | TATATGAACATGCTAACTCCTGAGCATTCAGCCTCATCAGGACCACTGCACACTCTGAACATCTGGAGCTaGGCCTGCAGGTCTCTCTCA | + |
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Preference number: 4 (lower is better) Translates to: YMNMLTPEHSASSGPLHTLNIWS*ACRSLS Trigger: TGAGAGAGACCTGCAGGCGCAGCTCCAGATGTTCAG...AGTGTGCAGTGGTCCTGATGAGGCTGAATGCTCAGGAGTTAGCATGTTCATATA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159099.8 |
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| CDS-3UTR GCA 90 bp | CTCAGGCACAAGGCAGTGGATGTGACAGATCTGCTCAGAAACCTGCTTGAAAACCATAGAGCTTCTTCCTaGTCTGCAAGGCCGAGTTTC | + |
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Preference number: 4 (lower is better) Translates to: LRHKAVDVTDLLRNLLENHRASS*SARPSF Trigger: GAAACTCGGCCTTGCAGAGCAGGAAGAAGCTCTATG...GTTTTCAAGCAGGTTTCTGAGCAGATCTGTCACATCCACTGCCTTGTGCCTGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001402.14 ENSMUST00000085311.13 |
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| CDS-3UTR GCA 90 bp | TACTATATGAACATGCTAACTCCTGAGCATTCAGCCTCATCAGGACCACTGCACGGAGATCGGCCATCTTaGTGGCGTCCTCGTTCTCTT | + |
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Preference number: 4 (lower is better) Translates to: YYMNMLTPEHSASSGPLHGDRPS*WRPRSL Trigger: AAGAGAACGAGGACGCCAGCAAGATGGCCGATCTCC...GTGCAGTGGTCCTGATGAGGCTGAATGCTCAGGAGTTAGCATGTTCATATAGTA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159099.8 |
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| CDS-3UTR GCA 90 bp | CAAACACCTGCATGCCCTGGTCTGTTGTTTCAGATTCTGAATAGCACAGGCTTATTGAGCACAGACTCCTaGAACGTGAGCTGCTGCTGG | + |
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Preference number: 4 (lower is better) Translates to: QTPACPGLLFQILNSTGLLSTDS*NVSCCW Trigger: CCAGCAGCAGCTCACGTTGCAGGAGTCTGTGCTCAA...TAAGCCTGTGCTATTCAGAATCTGAAACAACAGACCAGGGCATGCAGGTGTTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159099.8 |
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| CDS-3UTR GCA 90 bp | CTCAGGCACAAGGCAGTGGATGTGACAGATCTGCTCAGAAACCTGCTTGAAAACGCTTCATGCAGCTTCTaGCCCACACTTTCAAGCAAG | + |
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Preference number: 4 (lower is better) Translates to: LRHKAVDVTDLLRNLLENASCSF*PTLSSK Trigger: CTTGCTTGAAAGTGTGGGGCAGAAGCTGCATGAAGC...GTTTTCAAGCAGGTTTCTGAGCAGATCTGTCACATCCACTGCCTTGTGCCTGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001402.14 ENSMUST00000085311.13 |
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| CDS-3UTR CCA 90 bp | CTCAGGCACAAGGCAGTGGATGTGACAGATCTGCTCAGAAACCTGCTTGAAAACACTGGAGCCTACACCTaGGGTCAGTTCAAACATCCA | + |
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Preference number: 4 (lower is better) Translates to: LRHKAVDVTDLLRNLLENTGAYT*GQFKHP Trigger: TGGATGTTTGAACTGACCCCAGGTGTAGGCTCCAGT...GTTTTCAAGCAGGTTTCTGAGCAGATCTGTCACATCCACTGCCTTGTGCCTGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001402.14 ENSMUST00000085311.13 |
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| CDS-3UTR CCA 90 bp | AGGCACAAGGCAGTGGATGTGACAGATCTGCTCAGAAACCTGCTTGAAAACATGAGTTTGTTGAACCTCTaGTGGCCACTGGAGCACAGC | + |
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Preference number: 4 (lower is better) Translates to: RHKAVDVTDLLRNLLENMSLLNL*WPLEHS Trigger: GCTGTGCTCCAGTGGCCACCAGAGGTTCAACAAACT...CATGTTTTCAAGCAGGTTTCTGAGCAGATCTGTCACATCCACTGCCTTGTGCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001402.14 ENSMUST00000085311.13 |
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| 3UTR CAA 72 bp | AGTATGGCGTCCCAAACACCTGCATGCCCTGGTCTGTaGTTTCAGATTCTGAATAGCACAGGCTTACATCGC | + |
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Preference number: 4 (lower is better) Translates to: SMASQTPACPGL*FQILNSTGLHR Trigger: GCGATGTAAGCCTGTGCTATTCAGAATCTGAAACAACAGACCAGGGCATGCAGGTGTTTGGGACGCCATACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159099.8 |
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| CDS-3UTR TCA 90 bp | AGGCACAAGGCAGTGGATGTGACAGATCTGCTCAGAAACCTGCTTGAAAACATGGAGGTCCAAGTCACTTaGTACCACCCATCGGAAGAT | + |
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Preference number: 4 (lower is better) Translates to: RHKAVDVTDLLRNLLENMEVQVT*YHPSED Trigger: ATCTTCCGATGGGTGGTATCAAGTGACTTGGACCTC...CATGTTTTCAAGCAGGTTTCTGAGCAGATCTGTCACATCCACTGCCTTGTGCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001402.14 ENSMUST00000085311.13 |
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| CDS-3UTR GCA 90 bp | TCTACATGCGTGTGTCTATGTACATATAACTTAGGTGTCCCAGCGCTCTATGCTCTGAACATCTGGAGCTaGGCCTGCAGGTCTCTCTCA | + |
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Preference number: 4 (lower is better) Translates to: STCVCLCTYNLGVPALYALNIWS*ACRSLS Trigger: TGAGAGAGACCTGCAGGCGCAGCTCCAGATGTTCAG...AGCATAGAGCGCTGGGACACCTAAGTTATATGTACATAGACACACGCATGTAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001402.14 ENSMUST00000085311.13 |
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| CDS-3UTR GCA 90 bp | AGGCACAAGGCAGTGGATGTGACAGATCTGCTCAGAAACCTGCTTGAAAACATGAGCTTCTTCCTGCTCTaGAAGGCCGAGTTTCTCCAT | + |
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Preference number: 4 (lower is better) Translates to: RHKAVDVTDLLRNLLENMSFFLL*KAEFLH Trigger: ATGGAGAAACTCGGCCTTGCAGAGCAGGAAGAAGCT...CATGTTTTCAAGCAGGTTTCTGAGCAGATCTGTCACATCCACTGCCTTGTGCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001402.14 ENSMUST00000085311.13 |
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| CDS-3UTR GCA 90 bp | TCTACATGCGTGTGTCTATGTACATATAACTTAGGTGTCCCAGCGCTCTATGCTGGAGATCGGCCATCTTaGTGGCGTCCTCGTTCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: STCVCLCTYNLGVPALYAGDRPS*WRPRSL Trigger: AAGAGAACGAGGACGCCAGCAAGATGGCCGATCTCC...AGCATAGAGCGCTGGGACACCTAAGTTATATGTACATAGACACACGCATGTAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001402.14 ENSMUST00000085311.13 |
||
| CDS-3UTR GCA 90 bp | TCTACATGCGTGTGTCTATGTACATATAACTTAGGTGTCCCAGCGCTCTATGCTTCCTGCAACGTGAGCTaGTGCTGGAAGTACGACAGG | + |
|
Preference number: 4 (lower is better) Translates to: STCVCLCTYNLGVPALYASCNVS*CWKYDR Trigger: CCTGTCGTACTTCCAGCAGCAGCTCACGTTGCAGGA...AGCATAGAGCGCTGGGACACCTAAGTTATATGTACATAGACACACGCATGTAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001402.14 ENSMUST00000085311.13 |
||
| CDS-3UTR GCA 90 bp | ACATCGCCAGCTGTTTCTATCATAACTAGATCACCACCATCTAGGTCACCAATCTCCTGCAACGTGAGCTaGTGCTGGAAGTACGACAGG | + |
|
Preference number: 4 (lower is better) Translates to: TSPAVSIITRSPPSRSPISCNVS*CWKYDR Trigger: CCTGTCGTACTTCCAGCAGCAGCTCACGTTGCAGGA...GATTGGTGACCTAGATGGTGGTGATCTAGTTATGATAGAAACAGCTGGCGATGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159099.8 |
||
| CDS-3UTR GCA 90 bp | AGGCACAAGGCAGTGGATGTGACAGATCTGCTCAGAAACCTGCTTGAAAACATGCACACCAGTGACAACTaGTCTAACGATCTGAGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: RHKAVDVTDLLRNLLENMHTSDN*SNDLRS Trigger: GGACCTCAGATCGTTAGAGCAGTTGTCACTGGTGTG...CATGTTTTCAAGCAGGTTTCTGAGCAGATCTGTCACATCCACTGCCTTGTGCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001402.14 ENSMUST00000085311.13 |
||
| CDS-3UTR CCA 90 bp | AGGCACAAGGCAGTGGATGTGACAGATCTGCTCAGAAACCTGCTTGAAAACATGGTTCCTGTCGTCCTTTaGTGTCTGCAGCTGCTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: RHKAVDVTDLLRNLLENMVPVVL*CLQLLS Trigger: TGAAAGCAGCTGCAGACACCAAAGGACGACAGGAAC...CATGTTTTCAAGCAGGTTTCTGAGCAGATCTGTCACATCCACTGCCTTGTGCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001402.14 ENSMUST00000085311.13 |
||
| CDS-3UTR CCA 90 bp | TCTACATGCGTGTGTCTATGTACATATAACTTAGGTGTCCCAGCGCTCTATGCTTTGTTGAACCTCTGGTaGCCACTGGAGCACAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: STCVCLCTYNLGVPALYALLNLW*PLEHSC Trigger: GCAGCTGTGCTCCAGTGGCCACCAGAGGTTCAACAA...AGCATAGAGCGCTGGGACACCTAAGTTATATGTACATAGACACACGCATGTAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001402.14 ENSMUST00000085311.13 |
||
| CDS-3UTR TCA 90 bp | CTCAGGCACAAGGCAGTGGATGTGACAGATCTGCTCAGAAACCTGCTTGAAAACACTGCTCTAACGATCTaGGGTCCAAGTCACTTGATA | + |
|
Preference number: 4 (lower is better) Translates to: LRHKAVDVTDLLRNLLENTALTI*GPSHLI Trigger: TATCAAGTGACTTGGACCTCAGATCGTTAGAGCAGT...GTTTTCAAGCAGGTTTCTGAGCAGATCTGTCACATCCACTGCCTTGTGCCTGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001402.14 ENSMUST00000085311.13 |
||
| CDS-3UTR GCA 90 bp | CTCAGGCACAAGGCAGTGGATGTGACAGATCTGCTCAGAAACCTGCTTGAAAACAAACCATCAAGTGACTaGTCTCCCTGGCGAATATAC | + |
|
Preference number: 4 (lower is better) Translates to: LRHKAVDVTDLLRNLLENKPSSD*SPWRIY Trigger: GTATATTCGCCAGGGAGAGCAGTCACTTGATGGTTT...GTTTTCAAGCAGGTTTCTGAGCAGATCTGTCACATCCACTGCCTTGTGCCTGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001402.14 ENSMUST00000085311.13 |
||
| CDS-3UTR CCA 90 bp | TACTATATGAACATGCTAACTCCTGAGCATTCAGCCTCATCAGGACCACTGCACACTGGAGCCTACACCTaGGGTCAGTTCAAACATCCA | + |
|
Preference number: 4 (lower is better) Translates to: YYMNMLTPEHSASSGPLHTGAYT*GQFKHP Trigger: TGGATGTTTGAACTGACCCCAGGTGTAGGCTCCAGT...GTGCAGTGGTCCTGATGAGGCTGAATGCTCAGGAGTTAGCATGTTCATATAGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159099.8 |
||
| CDS-3UTR CCA 90 bp | TCTACATGCGTGTGTCTATGTACATATAACTTAGGTGTCCCAGCGCTCTATGCTCCGTTCTGGTGTTCCTaGTTCTTAACCGGGGAACGA | + |
|
Preference number: 4 (lower is better) Translates to: STCVCLCTYNLGVPALYAPFWCS*FLTGER Trigger: TCGTTCCCCGGTTAAGAACCAGGAACACCAGAACGG...AGCATAGAGCGCTGGGACACCTAAGTTATATGTACATAGACACACGCATGTAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001402.14 ENSMUST00000085311.13 |
||
| CDS-3UTR CCA 90 bp | CTCAGGCACAAGGCAGTGGATGTGACAGATCTGCTCAGAAACCTGCTTGAAAACGAATTGCATCCGTTCTaGTGTTCCTGGTTCTTAACC | + |
|
Preference number: 4 (lower is better) Translates to: LRHKAVDVTDLLRNLLENELHPF*CSWFLT Trigger: GGTTAAGAACCAGGAACACCAGAACGGATGCAATTC...GTTTTCAAGCAGGTTTCTGAGCAGATCTGTCACATCCACTGCCTTGTGCCTGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001402.14 ENSMUST00000085311.13 |
||
| CDS-3UTR TCA 90 bp | AGGCACAAGGCAGTGGATGTGACAGATCTGCTCAGAAACCTGCTTGAAAACATGCAGTTGCTTTGTAAGTaGTGTGACAAGAGTGGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: RHKAVDVTDLLRNLLENMQLLCK*CDKSGG Trigger: TCCACCACTCTTGTCACATCACTTACAAAGCAACTG...CATGTTTTCAAGCAGGTTTCTGAGCAGATCTGTCACATCCACTGCCTTGTGCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001402.14 ENSMUST00000085311.13 |
||
| CDS-3UTR GCA 90 bp | TCTACATGCGTGTGTCTATGTACATATAACTTAGGTGTCCCAGCGCTCTATGCTCATAGAGCTTCTTCCTaGTCTGCAAGGCCGAGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: STCVCLCTYNLGVPALYAHRASS*SARPSF Trigger: GAAACTCGGCCTTGCAGAGCAGGAAGAAGCTCTATG...AGCATAGAGCGCTGGGACACCTAAGTTATATGTACATAGACACACGCATGTAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001402.14 ENSMUST00000085311.13 |
||
| CDS-3UTR GCA 90 bp | ACATCGCCAGCTGTTTCTATCATAACTAGATCACCACCATCTAGGTCACCAATCCATAGAGCTTCTTCCTaGTCTGCAAGGCCGAGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: TSPAVSIITRSPPSRSPIHRASS*SARPSF Trigger: GAAACTCGGCCTTGCAGAGCAGGAAGAAGCTCTATG...GATTGGTGACCTAGATGGTGGTGATCTAGTTATGATAGAAACAGCTGGCGATGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159099.8 |
||
| CDS-3UTR GCA 90 bp | AGGCACAAGGCAGTGGATGTGACAGATCTGCTCAGAAACCTGCTTGAAAACATGAGCCTTTTCTTCCTTTaGCAGTTCCTGTCGTCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: RHKAVDVTDLLRNLLENMSLFFL*QFLSSF Trigger: AAAGGACGACAGGAACTGGCAAAGGAAGAAAAGGCT...CATGTTTTCAAGCAGGTTTCTGAGCAGATCTGTCACATCCACTGCCTTGTGCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001402.14 ENSMUST00000085311.13 |
||
| CDS-3UTR GCA 90 bp | TCTACATGCGTGTGTCTATGTACATATAACTTAGGTGTCCCAGCGCTCTATGCTCACACCAGTGACAACTaGTCTAACGATCTGAGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: STCVCLCTYNLGVPALYAHTSDN*SNDLRS Trigger: GGACCTCAGATCGTTAGAGCAGTTGTCACTGGTGTG...AGCATAGAGCGCTGGGACACCTAAGTTATATGTACATAGACACACGCATGTAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001402.14 ENSMUST00000085311.13 |
||
| CDS-3UTR GCA 90 bp | CTCAGGCACAAGGCAGTGGATGTGACAGATCTGCTCAGAAACCTGCTTGAAAACAGATATAGAATCCTCTaGACACCAGTGACAACTGCT | + |
|
Preference number: 4 (lower is better) Translates to: LRHKAVDVTDLLRNLLENRYRIL*TPVTTA Trigger: AGCAGTTGTCACTGGTGTGCAGAGGATTCTATATCT...GTTTTCAAGCAGGTTTCTGAGCAGATCTGTCACATCCACTGCCTTGTGCCTGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001402.14 ENSMUST00000085311.13 |
||
| CDS-3UTR GCA 90 bp | TCTACATGCGTGTGTCTATGTACATATAACTTAGGTGTCCCAGCGCTCTATGCTGCTTCATGCAGCTTCTaGCCCACACTTTCAAGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: STCVCLCTYNLGVPALYAASCSF*PTLSSK Trigger: CTTGCTTGAAAGTGTGGGGCAGAAGCTGCATGAAGC...AGCATAGAGCGCTGGGACACCTAAGTTATATGTACATAGACACACGCATGTAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001402.14 ENSMUST00000085311.13 |
||
| CDS-3UTR GCA 90 bp | AGGCACAAGGCAGTGGATGTGACAGATCTGCTCAGAAACCTGCTTGAAAACATGCTCAAAAGCACTCACTaGAGTCTCACCAGTTGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: RHKAVDVTDLLRNLLENMLKSTH*SLTSCF Trigger: AAAGCAACTGGTGAGACTGCAGTGAGTGCTTTTGAG...CATGTTTTCAAGCAGGTTTCTGAGCAGATCTGTCACATCCACTGCCTTGTGCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001402.14 ENSMUST00000085311.13 |
||
| CDS-3UTR CCA 90 bp | TCTACATGCGTGTGTCTATGTACATATAACTTAGGTGTCCCAGCGCTCTATGCTACTGGAGCCTACACCTaGGGTCAGTTCAAACATCCA | + |
|
Preference number: 4 (lower is better) Translates to: STCVCLCTYNLGVPALYATGAYT*GQFKHP Trigger: TGGATGTTTGAACTGACCCCAGGTGTAGGCTCCAGT...AGCATAGAGCGCTGGGACACCTAAGTTATATGTACATAGACACACGCATGTAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001402.14 ENSMUST00000085311.13 |
||
| CDS-3UTR CCA 90 bp | AGGCACAAGGCAGTGGATGTGACAGATCTGCTCAGAAACCTGCTTGAAAACATGGAATTGCATCCGTTCTaGTGTTCCTGGTTCTTAACC | + |
|
Preference number: 4 (lower is better) Translates to: RHKAVDVTDLLRNLLENMELHPF*CSWFLT Trigger: GGTTAAGAACCAGGAACACCAGAACGGATGCAATTC...CATGTTTTCAAGCAGGTTTCTGAGCAGATCTGTCACATCCACTGCCTTGTGCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001402.14 ENSMUST00000085311.13 |
||
| CDS-3UTR TCA 90 bp | CTCTTCTTAAAGGAATTCCAACAACTTAAAGTAAGCTCCAACTCCATGTATGTAGGCCGAGTTTCTCCATaGCTGGAGCCTACACCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: LFLKEFQQLKVSSNSMYVGRVSP*LEPTPG Trigger: CCCAGGTGTAGGCTCCAGTCATGGAGAAACTCGGCC...TACATACATGGAGTTGGAGCTTACTTTAAGTTGTTGGAATTCCTTTAAGAAGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001402.14 ENSMUST00000085311.13 |
||
| CDS-3UTR GCA 90 bp | AGGCACAAGGCAGTGGATGTGACAGATCTGCTCAGAAACCTGCTTGAAAACATGTGCAGTCTCACCAGTTaGTTTGTAAGTGATGTGACA | + |
|
Preference number: 4 (lower is better) Translates to: RHKAVDVTDLLRNLLENMCSLTS*FVSDVT Trigger: TGTCACATCACTTACAAAGCAACTGGTGAGACTGCA...CATGTTTTCAAGCAGGTTTCTGAGCAGATCTGTCACATCCACTGCCTTGTGCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001402.14 ENSMUST00000085311.13 |
||
| CDS-3UTR TCA 90 bp | TCTACATGCGTGTGTCTATGTACATATAACTTAGGTGTCCCAGCGCTCTATGCTACTGCTCTAACGATCTaGGGTCCAAGTCACTTGATA | + |
|
Preference number: 4 (lower is better) Translates to: STCVCLCTYNLGVPALYATALTI*GPSHLI Trigger: TATCAAGTGACTTGGACCTCAGATCGTTAGAGCAGT...AGCATAGAGCGCTGGGACACCTAAGTTATATGTACATAGACACACGCATGTAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001402.14 ENSMUST00000085311.13 |
||
| CDS-3UTR TCA 90 bp | TCTACATGCGTGTGTCTATGTACATATAACTTAGGTGTCCCAGCGCTCTATGCTGCAAAGACTTTGGTCTaGTTGTCTGCATCTTGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: STCVCLCTYNLGVPALYAAKTLV*LSASCD Trigger: GTCACAAGATGCAGACAATCAGACCAAAGTCTTTGC...AGCATAGAGCGCTGGGACACCTAAGTTATATGTACATAGACACACGCATGTAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001402.14 ENSMUST00000085311.13 |
||
| CDS-3UTR CCA 90 bp | CTCAGGCACAAGGCAGTGGATGTGACAGATCTGCTCAGAAACCTGCTTGAAAACTTACAGCAAAGACTTTaGTCTGATTGTCTGCATCTT | + |
|
Preference number: 4 (lower is better) Translates to: LRHKAVDVTDLLRNLLENLQQRL*SDCLHL Trigger: AAGATGCAGACAATCAGACCAAAGTCTTTGCTGTAA...GTTTTCAAGCAGGTTTCTGAGCAGATCTGTCACATCCACTGCCTTGTGCCTGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001402.14 ENSMUST00000085311.13 |
||
| CDS-3UTR TCA 90 bp | CTCTTCTTAAAGGAATTCCAACAACTTAAAGTAAGCTCCAACTCCATGTATGTACCCACATGGAAGCTGTaGTCTGCCTCTTGGACAGGA | + |
|
Preference number: 4 (lower is better) Translates to: LFLKEFQQLKVSSNSMYVPTWKL*SASWTG Trigger: TCCTGTCCAAGAGGCAGATCACAGCTTCCATGTGGG...TACATACATGGAGTTGGAGCTTACTTTAAGTTGTTGGAATTCCTTTAAGAAGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001402.14 ENSMUST00000085311.13 |
||
| CDS-3UTR GCA 90 bp | CTCTTCTTAAAGGAATTCCAACAACTTAAAGTAAGCTCCAACTCCATGTATGTATCCTGCAACGTGAGCTaGTGCTGGAAGTACGACAGG | + |
|
Preference number: 4 (lower is better) Translates to: LFLKEFQQLKVSSNSMYVSCNVS*CWKYDR Trigger: CCTGTCGTACTTCCAGCAGCAGCTCACGTTGCAGGA...TACATACATGGAGTTGGAGCTTACTTTAAGTTGTTGGAATTCCTTTAAGAAGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001402.14 ENSMUST00000085311.13 |
||
| CDS-3UTR GCA 90 bp | TCTACATGCGTGTGTCTATGTACATATAACTTAGGTGTCCCAGCGCTCTATGCTAGATATAGAATCCTCTaGACACCAGTGACAACTGCT | + |
|
Preference number: 4 (lower is better) Translates to: STCVCLCTYNLGVPALYARYRIL*TPVTTA Trigger: AGCAGTTGTCACTGGTGTGCAGAGGATTCTATATCT...AGCATAGAGCGCTGGGACACCTAAGTTATATGTACATAGACACACGCATGTAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001402.14 ENSMUST00000085311.13 |
||
| CDS-3UTR GCA 90 bp | TCTACATGCGTGTGTCTATGTACATATAACTTAGGTGTCCCAGCGCTCTATGCTTGCAGTCTCACCAGTTaGTTTGTAAGTGATGTGACA | + |
|
Preference number: 4 (lower is better) Translates to: STCVCLCTYNLGVPALYACSLTS*FVSDVT Trigger: TGTCACATCACTTACAAAGCAACTGGTGAGACTGCA...AGCATAGAGCGCTGGGACACCTAAGTTATATGTACATAGACACACGCATGTAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001402.14 ENSMUST00000085311.13 |
||
| CDS-3UTR CCA 90 bp | TCTACATGCGTGTGTCTATGTACATATAACTTAGGTGTCCCAGCGCTCTATGCTGTTAACATCATCACATaGCCATCAGGAAAGAATCTC | + |
|
Preference number: 4 (lower is better) Translates to: STCVCLCTYNLGVPALYAVNIIT*PSGKNL Trigger: GAGATTCTTTCCTGATGGCCATGTGATGATGTTAAC...AGCATAGAGCGCTGGGACACCTAAGTTATATGTACATAGACACACGCATGTAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001402.14 ENSMUST00000085311.13 |
||
| CDS-3UTR GCA 90 bp | CTCTTCTTAAAGGAATTCCAACAACTTAAAGTAAGCTCCAACTCCATGTATGTAAGCTTCTTCCTGCTCTaGAAGGCCGAGTTTCTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: LFLKEFQQLKVSSNSMYVSFFLL*KAEFLH Trigger: ATGGAGAAACTCGGCCTTGCAGAGCAGGAAGAAGCT...TACATACATGGAGTTGGAGCTTACTTTAAGTTGTTGGAATTCCTTTAAGAAGAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001402.14 ENSMUST00000085311.13 |
||
| CDS-3UTR CCA 90 bp | CTCTTCTTAAAGGAATTCCAACAACTTAAAGTAAGCTCCAACTCCATGTATGTAGTTCCTGTCGTCCTTTaGTGTCTGCAGCTGCTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: LFLKEFQQLKVSSNSMYVVPVVL*CLQLLS Trigger: TGAAAGCAGCTGCAGACACCAAAGGACGACAGGAAC...TACATACATGGAGTTGGAGCTTACTTTAAGTTGTTGGAATTCCTTTAAGAAGAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001402.14 ENSMUST00000085311.13 |
||
| CDS-3UTR GCA 90 bp | CTCTTCTTAAAGGAATTCCAACAACTTAAAGTAAGCTCCAACTCCATGTATGTAAAACCATCAAGTGACTaGTCTCCCTGGCGAATATAC | + |
|
Preference number: 4 (lower is better) Translates to: LFLKEFQQLKVSSNSMYVKPSSD*SPWRIY Trigger: GTATATTCGCCAGGGAGAGCAGTCACTTGATGGTTT...TACATACATGGAGTTGGAGCTTACTTTAAGTTGTTGGAATTCCTTTAAGAAGAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001402.14 ENSMUST00000085311.13 |
||
| CDS-3UTR GCA 90 bp | CTCTTCTTAAAGGAATTCCAACAACTTAAAGTAAGCTCCAACTCCATGTATGTACTCAAAAGCACTCACTaGAGTCTCACCAGTTGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: LFLKEFQQLKVSSNSMYVLKSTH*SLTSCF Trigger: AAAGCAACTGGTGAGACTGCAGTGAGTGCTTTTGAG...TACATACATGGAGTTGGAGCTTACTTTAAGTTGTTGGAATTCCTTTAAGAAGAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001402.14 ENSMUST00000085311.13 |
||
| CDS-3UTR CCA 90 bp | CTCTTCTTAAAGGAATTCCAACAACTTAAAGTAAGCTCCAACTCCATGTATGTAGTTAACATCATCACATaGCCATCAGGAAAGAATCTC | + |
|
Preference number: 4 (lower is better) Translates to: LFLKEFQQLKVSSNSMYVVNIIT*PSGKNL Trigger: GAGATTCTTTCCTGATGGCCATGTGATGATGTTAAC...TACATACATGGAGTTGGAGCTTACTTTAAGTTGTTGGAATTCCTTTAAGAAGAG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001402.14 ENSMUST00000085311.13 |
||
| CDS CCA 90 bp | GTCCTCGTTCTCTTCGATGTAGCCGCTCCCAACGCCGTCGCCGTCTaGAGACCGGGTGTAAGTGATCTTGAACTCAATGTCTGGCACCAG | + |
|
Preference number: 5 (lower is better) Translates to: VLVLFDVAAPNAVAV*RPGVSDLELNVWHQ Trigger: CTGGTGCCAGACATTGAGTTCAAGATCACTTACACCCGGTCTCCAGACGGCGACGGCGTTGGGAGCGGCTACATCGAAGAGAACGAGGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001402.14 ENSMUST00000085311.13 ENSMUST00000159099.8 |
||
| CDS-3UTR CAA 90 bp | GGTGTCCCAGCGCTCTATGCTTCTGCTCATGCAGCAGTGACATGCTGGTGTGGCAGTTCCTGTCGTCCTTaGGTGTCTGCAGCTGCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: GVPALYASAHAAVTCWCGSSCRP*VSAAAF Trigger: GAAAGCAGCTGCAGACACCAAAGGACGACAGGAACT...GCCACACCAGCATGTCACTGCTGCATGAGCAGAAGCATAGAGCGCTGGGACACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001402.14 ENSMUST00000085311.13 |
||
| CDS-3UTR CAA 90 bp | GGTGTCCCAGCGCTCTATGCTTCTGCTCATGCAGCAGTGACATGCTGGTGTGGCGCTGTGATCTGCCTCTaGGACAGGAACACGACGAAA | + |
|
Preference number: 5 (lower is better) Translates to: GVPALYASAHAAVTCWCGAVICL*DRNTTK Trigger: TTTCGTCGTGTTCCTGTCCAAGAGGCAGATCACAGC...GCCACACCAGCATGTCACTGCTGCATGAGCAGAAGCATAGAGCGCTGGGACACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001402.14 ENSMUST00000085311.13 |
||
| CDS-3UTR CAA 90 bp | GGTGTCCCAGCGCTCTATGCTTCTGCTCATGCAGCAGTGACATGCTGGTGTGGCAATGACCCAGCAGAATaGCATCCGTTCTGGTGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: GVPALYASAHAAVTCWCGNDPAE*HPFWCS Trigger: GGAACACCAGAACGGATGCAATTCTGCTGGGTCATT...GCCACACCAGCATGTCACTGCTGCATGAGCAGAAGCATAGAGCGCTGGGACACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001402.14 ENSMUST00000085311.13 |
||
| CDS GCA 90 bp | TCGTCCTTTGGTGTCTGCAGCTGCTTTCAGCATAGAGCTTCTTCCTaGTCTGCAAGGCCGAGTTTCTCCATGACTGGAGCCTACACCTGG | + |
|
Preference number: 5 (lower is better) Translates to: SSFGVCSCFQHRASS*SARPSFSMTGAYTW Trigger: CCAGGTGTAGGCTCCAGTCATGGAGAAACTCGGCCTTGCAGAGCAGGAAGAAGCTCTATGCTGAAAGCAGCTGCAGACACCAAAGGACGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001402.14 ENSMUST00000085311.13 ENSMUST00000159099.8 ENSMUST00000162625.2 |
||
| CDS CCA 90 bp | GAATTGCATCCGTTCTGGTGTTCCTGGTTCTTAACCGGGGAACGATaGACGGAGGCTCCTCGGGGGTGGTTAACATCATCACATGGCCAT | + |
|
Preference number: 5 (lower is better) Translates to: ELHPFWCSWFLTGER*TEAPRGWLTSSHGH Trigger: ATGGCCATGTGATGATGTTAACCACCCCCGAGGAGCCTCCGTCCATCGTTCCCCGGTTAAGAACCAGGAACACCAGAACGGATGCAATTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001402.14 ENSMUST00000085311.13 |
||
| CDS-3UTR CAA 90 bp | GGTGTCCCAGCGCTCTATGCTTCTGCTCATGCAGCAGTGACATGCTGGTGTGGCATAGAGAGCTCCATTTaGTTCTTCCTCCACTGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: GVPALYASAHAAVTCWCGIESSI*FFLHCL Trigger: CAGGCAGTGGAGGAAGAACAAAATGGAGCTCTCTAT...GCCACACCAGCATGTCACTGCTGCATGAGCAGAAGCATAGAGCGCTGGGACACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001402.14 ENSMUST00000085311.13 |
||
| CDS-3UTR CAA 90 bp | GCTGATGCGCACAGTGGCACCGAGTTCCTCCAGCTTCCCAAGGGCTTCAGTGAAATAGAGAGCTCCATTTaGTTCTTCCTCCACTGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: ADAHSGTEFLQLPKGFSEIESSI*FFLHCL Trigger: CAGGCAGTGGAGGAAGAACAAAATGGAGCTCTCTAT...TTCACTGAAGCCCTTGGGAAGCTGGAGGAACTCGGTGCCACTGTGCGCATCAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159099.8 |
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| CDS-3UTR CAA 90 bp | GGTGTCCCAGCGCTCTATGCTTCTGCTCATGCAGCAGTGACATGCTGGTGTGGCTCTGTAATATTCCACTaGGTGCCACGCCCTGTAGAA | + |
|
Preference number: 5 (lower is better) Translates to: GVPALYASAHAAVTCWCGSVIFH*VPRPVE Trigger: TTCTACAGGGCGTGGCACCAAGTGGAATATTACAGA...GCCACACCAGCATGTCACTGCTGCATGAGCAGAAGCATAGAGCGCTGGGACACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001402.14 ENSMUST00000085311.13 |
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| CDS GCA 90 bp | TCGAGCCTTTTCTTCCTTTGCCAGTTCCTGTCGTCCTTTGGTGTCTaGAGCTGCTTTCAGCATAGAGCTTCTTCCTGCTCTGCAAGGCCG | + |
|
Preference number: 5 (lower is better) Translates to: SSLFFLCQFLSSFGV*SCFQHRASSCSARP Trigger: CGGCCTTGCAGAGCAGGAAGAAGCTCTATGCTGAAAGCAGCTGCAGACACCAAAGGACGACAGGAACTGGCAAAGGAAGAAAAGGCTCGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001402.14 ENSMUST00000085311.13 ENSMUST00000159099.8 ENSMUST00000162625.2 |
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| CDS CCA 90 bp | GTCGCCGTCTGGAGACCGGGTGTAAGTGATCTTGAACTCAATGTCTaGCACCAGCTGCATCGCCCTACGGTAGAACTTGATGGCTTCATA | + |
|
Preference number: 5 (lower is better) Translates to: VAVWRPGVSDLELNV*HQLHRPTVELDGFI Trigger: TATGAAGCCATCAAGTTCTACCGTAGGGCGATGCAGCTGGTGCCAGACATTGAGTTCAAGATCACTTACACCCGGTCTCCAGACGGCGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001402.14 ENSMUST00000085311.13 ENSMUST00000159099.8 |
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| CDS CCA 90 bp | CATCTTGTGACAAGCGGTAATGACCCAGCAGAATTGCATCCGTTCTaGTGTTCCTGGTTCTTAACCGGGGAACGATGGACGGAGGCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: HLVTSGNDPAELHPF*CSWFLTGERWTEAP Trigger: AGGAGCCTCCGTCCATCGTTCCCCGGTTAAGAACCAGGAACACCAGAACGGATGCAATTCTGCTGGGTCATTACCGCTTGTCACAAGATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001402.14 ENSMUST00000085311.13 |
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| CDS CCA 90 bp | TCCTGGTTCTTAACCGGGGAACGATGGACGGAGGCTCCTCGGGGGTaGTTAACATCATCACATGGCCATCAGGAAAGAATCTCATGTATC | + |
|
Preference number: 5 (lower is better) Translates to: SWFLTGERWTEAPRG*LTSSHGHQERISCI Trigger: GATACATGAGATTCTTTCCTGATGGCCATGTGATGATGTTAACCACCCCCGAGGAGCCTCCGTCCATCGTTCCCCGGTTAAGAACCAGGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001402.14 ENSMUST00000085311.13 |
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| CDS GCA 90 bp | CTTTTCTTCCTTTGCCAGTTCCTGTCGTCCTTTGGTGTCTGCAGCTaGTTTCAGCATAGAGCTTCTTCCTGCTCTGCAAGGCCGAGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: LFFLCQFLSSFGVCS*FQHRASSCSARPSF Trigger: GAAACTCGGCCTTGCAGAGCAGGAAGAAGCTCTATGCTGAAAGCAGCTGCAGACACCAAAGGACGACAGGAACTGGCAAAGGAAGAAAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001402.14 ENSMUST00000085311.13 ENSMUST00000159099.8 ENSMUST00000162625.2 |
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| CDS-3UTR CAA 90 bp | CTCAGGCACAAGGCAGTGGATGTGACAGATCTGCTCAGAAACCTGCTTGAAAACGAGCCTTTTCTTCCTTaGCCAGTTCCTGTCGTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: LRHKAVDVTDLLRNLLENEPFLP*PVPVVL Trigger: AAGGACGACAGGAACTGGCAAAGGAAGAAAAGGCTC...GTTTTCAAGCAGGTTTCTGAGCAGATCTGTCACATCCACTGCCTTGTGCCTGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001402.14 ENSMUST00000085311.13 |
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| CDS-3UTR CAA 90 bp | CTCAGGCACAAGGCAGTGGATGTGACAGATCTGCTCAGAAACCTGCTTGAAAACATCCAGATGAGTTTGTaGAACCTCTGGTGGCCACTG | + |
|
Preference number: 5 (lower is better) Translates to: LRHKAVDVTDLLRNLLENIQMSL*NLWWPL Trigger: CAGTGGCCACCAGAGGTTCAACAAACTCATCTGGAT...GTTTTCAAGCAGGTTTCTGAGCAGATCTGTCACATCCACTGCCTTGTGCCTGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001402.14 ENSMUST00000085311.13 |
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| CDS-3UTR CAA 90 bp | AGGCACAAGGCAGTGGATGTGACAGATCTGCTCAGAAACCTGCTTGAAAACATGGAGCCTTTTCTTCCTTaGCCAGTTCCTGTCGTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: RHKAVDVTDLLRNLLENMEPFLP*PVPVVL Trigger: AAGGACGACAGGAACTGGCAAAGGAAGAAAAGGCTC...CATGTTTTCAAGCAGGTTTCTGAGCAGATCTGTCACATCCACTGCCTTGTGCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001402.14 ENSMUST00000085311.13 |
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| CDS-3UTR CAA 90 bp | CTCAGGCACAAGGCAGTGGATGTGACAGATCTGCTCAGAAACCTGCTTGAAAACATAGAGAGCTCCATTTaGTTCTTCCTCCACTGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: LRHKAVDVTDLLRNLLENIESSI*FFLHCL Trigger: CAGGCAGTGGAGGAAGAACAAAATGGAGCTCTCTAT...GTTTTCAAGCAGGTTTCTGAGCAGATCTGTCACATCCACTGCCTTGTGCCTGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001402.14 ENSMUST00000085311.13 |
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| CDS-3UTR CAA 90 bp | CTCAGGCACAAGGCAGTGGATGTGACAGATCTGCTCAGAAACCTGCTTGAAAACAGGGGCGTGTACATCTaGTCAATCTCAAAAGCACTC | + |
|
Preference number: 5 (lower is better) Translates to: LRHKAVDVTDLLRNLLENRGVYI*SISKAL Trigger: GAGTGCTTTTGAGATTGACAAGATGTACACGCCCCT...GTTTTCAAGCAGGTTTCTGAGCAGATCTGTCACATCCACTGCCTTGTGCCTGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000001402.14 ENSMUST00000085311.13 |
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| CDS GCA 90 bp | GAACTTGATGGCTTCATAGAGAGCTCCATTTTGTTCTTCCTCCACTaGCTGCAGGAAGAGTTCTCGAGCCTTTTCTTCCTTTGCCAGTTC | + |
|
Preference number: 5 (lower is better) Translates to: ELDGFIESSILFFLH*LQEEFSSLFFLCQF Trigger: GAACTGGCAAAGGAAGAAAAGGCTCGAGAACTCTTCCTGCAGGCAGTGGAGGAAGAACAAAATGGAGCTCTCTATGAAGCCATCAAGTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001402.14 ENSMUST00000085311.13 ENSMUST00000159099.8 |
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| CDS-3UTR CAA 90 bp | TCTACATGCGTGTGTCTATGTACATATAACTTAGGTGTCCCAGCGCTCTATGCTAGTTCCTGTCGTCCTTaGGTGTCTGCAGCTGCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: STCVCLCTYNLGVPALYASSCRP*VSAAAF Trigger: GAAAGCAGCTGCAGACACCAAAGGACGACAGGAACT...AGCATAGAGCGCTGGGACACCTAAGTTATATGTACATAGACACACGCATGTAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001402.14 ENSMUST00000085311.13 |
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| CDS-3UTR CAA 90 bp | ACATCGCCAGCTGTTTCTATCATAACTAGATCACCACCATCTAGGTCACCAATCAGTTCCTGTCGTCCTTaGGTGTCTGCAGCTGCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: TSPAVSIITRSPPSRSPISSCRP*VSAAAF Trigger: GAAAGCAGCTGCAGACACCAAAGGACGACAGGAACT...GATTGGTGACCTAGATGGTGGTGATCTAGTTATGATAGAAACAGCTGGCGATGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159099.8 |
||
| CDS-3UTR CAA 90 bp | AGGCACAAGGCAGTGGATGTGACAGATCTGCTCAGAAACCTGCTTGAAAACATGTCTGTAATATTCCACTaGGTGCCACGCCCTGTAGAA | + |
|
Preference number: 5 (lower is better) Translates to: RHKAVDVTDLLRNLLENMSVIFH*VPRPVE Trigger: TTCTACAGGGCGTGGCACCAAGTGGAATATTACAGA...CATGTTTTCAAGCAGGTTTCTGAGCAGATCTGTCACATCCACTGCCTTGTGCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001402.14 ENSMUST00000085311.13 |
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| CDS-3UTR CAA 90 bp | TCTACATGCGTGTGTCTATGTACATATAACTTAGGTGTCCCAGCGCTCTATGCTGCTGTGATCTGCCTCTaGGACAGGAACACGACGAAA | + |
|
Preference number: 5 (lower is better) Translates to: STCVCLCTYNLGVPALYAAVICL*DRNTTK Trigger: TTTCGTCGTGTTCCTGTCCAAGAGGCAGATCACAGC...AGCATAGAGCGCTGGGACACCTAAGTTATATGTACATAGACACACGCATGTAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001402.14 ENSMUST00000085311.13 |
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| CDS TCA 90 bp | TCTGTAATATTCCACTTGGTGCCACGCCCTGTAGAAACCATCAAGTaGCTGCTCTCCCTGGCGAATATACGTGGTTTTACTGATGTACAC | + |
|
Preference number: 5 (lower is better) Translates to: SVIFHLVPRPVETIK*LLSLANIRGFTDVH Trigger: GTGTACATCAGTAAAACCACGTATATTCGCCAGGGAGAGCAGTCACTTGATGGTTTCTACAGGGCGTGGCACCAAGTGGAATATTACAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001402.14 ENSMUST00000085311.13 |
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| CDS TCA 90 bp | AGATATAGAATCCTCTGCACACCAGTGACAACTGCTCTAACGATCTaGGGTCCAAGTCACTTGATACCACCCATCGGAAGATGTACATCA | + |
|
Preference number: 5 (lower is better) Translates to: RYRILCTPVTTALTI*GPSHLIPPIGRCTS Trigger: TGATGTACATCTTCCGATGGGTGGTATCAAGTGACTTGGACCTCAGATCGTTAGAGCAGTTGTCACTGGTGTGCAGAGGATTCTATATCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001402.14 ENSMUST00000085311.13 |
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| CDS-3UTR CAA 90 bp | TCTACATGCGTGTGTCTATGTACATATAACTTAGGTGTCCCAGCGCTCTATGCTAGGGGCGTGTACATCTaGTCAATCTCAAAAGCACTC | + |
|
Preference number: 5 (lower is better) Translates to: STCVCLCTYNLGVPALYARGVYI*SISKAL Trigger: GAGTGCTTTTGAGATTGACAAGATGTACACGCCCCT...AGCATAGAGCGCTGGGACACCTAAGTTATATGTACATAGACACACGCATGTAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001402.14 ENSMUST00000085311.13 |
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| CDS TCA 90 bp | CTTAGTTATTACAGCAAAGACTTTGGTCTGATTGTCTGCATCTTGTaGCAAGCGGTAATGACCCAGCAGAATTGCATCCGTTCTGGTGTT | + |
|
Preference number: 5 (lower is better) Translates to: LSYYSKDFGLIVCIL*QAVMTQQNCIRSGV Trigger: AACACCAGAACGGATGCAATTCTGCTGGGTCATTACCGCTTGTCACAAGATGCAGACAATCAGACCAAAGTCTTTGCTGTAATAACTAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001402.14 ENSMUST00000085311.13 |
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| CDS-3UTR CAA 90 bp | CTCTTCTTAAAGGAATTCCAACAACTTAAAGTAAGCTCCAACTCCATGTATGTAAATGACCCAGCAGAATaGCATCCGTTCTGGTGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: LFLKEFQQLKVSSNSMYVNDPAE*HPFWCS Trigger: GGAACACCAGAACGGATGCAATTCTGCTGGGTCATT...TACATACATGGAGTTGGAGCTTACTTTAAGTTGTTGGAATTCCTTTAAGAAGAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001402.14 ENSMUST00000085311.13 |
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| CDS GCA 72 bp | GCTGCTGCTGGAAGTACGACAGGAGATCGGCCATCTTaGTGGCGTCCTCGTTCTCTTCGATGTAGCCGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: AAAGSTTGDRPS*WRPRSLRCSRS Trigger: GGAGCGGCTACATCGAAGAGAACGAGGACGCCAGCAAGATGGCCGATCTCCTGTCGTACTTCCAGCAGCAGC 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001402.14 ENSMUST00000085311.13 ENSMUST00000159099.8 |
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| CDS CCA 72 bp | GCTGCTGGAAGTACGACAGGAGATCGGCCATCTTGCTaGCGTCCTCGTTCTCTTCGATGTAGCCGCTCCCAA | + |
|
Preference number: 6 (lower is better) Translates to: AAGSTTGDRPSC*RPRSLRCSRSQ Trigger: TTGGGAGCGGCTACATCGAAGAGAACGAGGACGCCAGCAAGATGGCCGATCTCCTGTCGTACTTCCAGCAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001402.14 ENSMUST00000085311.13 ENSMUST00000159099.8 |
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| CDS CCA 72 bp | CTCTTCGATGTAGCCGCTCCCAACGCCGTCGCCGTCTaGAGACCGGGTGTAAGTGATCTTGAACTCAATGTC | + |
|
Preference number: 6 (lower is better) Translates to: LFDVAAPNAVAV*RPGVSDLELNV Trigger: GACATTGAGTTCAAGATCACTTACACCCGGTCTCCAGACGGCGACGGCGTTGGGAGCGGCTACATCGAAGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001402.14 ENSMUST00000085311.13 ENSMUST00000159099.8 |
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| CDS CCA 72 bp | AGTTTGAGCACAGACTCCTGCAACGTGAGCTGCTGCTaGAAGTACGACAGGAGATCGGCCATCTTGCTGGCG | + |
|
Preference number: 6 (lower is better) Translates to: SLSTDSCNVSCC*KYDRRSAILLA Trigger: CGCCAGCAAGATGGCCGATCTCCTGTCGTACTTCCAGCAGCAGCTCACGTTGCAGGAGTCTGTGCTCAAACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001402.14 ENSMUST00000085311.13 ENSMUST00000159099.8 |
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| CDS GCA 72 bp | GGTGTCTGCAGCTGCTTTCAGCATAGAGCTTCTTCCTaGTCTGCAAGGCCGAGTTTCTCCATGACTGGAGCC | + |
|
Preference number: 6 (lower is better) Translates to: GVCSCFQHRASS*SARPSFSMTGA Trigger: GGCTCCAGTCATGGAGAAACTCGGCCTTGCAGAGCAGGAAGAAGCTCTATGCTGAAAGCAGCTGCAGACACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001402.14 ENSMUST00000085311.13 ENSMUST00000159099.8 ENSMUST00000162625.2 |
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| CDS CCA 72 bp | CAAGAGTGGTGGATCCAGATGAGTTTGTTGAACCTCTaGTGGCCACTGGAGCACAGCTGCAGTCCCACATGG | + |
|
Preference number: 6 (lower is better) Translates to: QEWWIQMSLLNL*WPLEHSCSPTW Trigger: CCATGTGGGACTGCAGCTGTGCTCCAGTGGCCACCAGAGGTTCAACAAACTCATCTGGATCCACCACTCTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001402.14 ENSMUST00000085311.13 |
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| CDS TCA 72 bp | GAGCTTCTTCCTGCTCTGCAAGGCCGAGTTTCTCCATaGCTGGAGCCTACACCTGGGGTCAGTTCAAACATC | + |
|
Preference number: 6 (lower is better) Translates to: ELLPALQGRVSP*LEPTPGVSSNI Trigger: GATGTTTGAACTGACCCCAGGTGTAGGCTCCAGTCATGGAGAAACTCGGCCTTGCAGAGCAGGAAGAAGCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001402.14 ENSMUST00000085311.13 ENSMUST00000159099.8 ENSMUST00000162625.2 |
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| CDS GCA 72 bp | ACATCTCTCTCCAGGACGCGTATGGAACGAGCTTCATaGAGCTTCTGCCCCACACTTTCAAGCAAGCCAGAC | + |
|
Preference number: 6 (lower is better) Translates to: TSLSRTRMERAS*SFCPTLSSKPD Trigger: GTCTGGCTTGCTTGAAAGTGTGGGGCAGAAGCTGCATGAAGCTCGTTCCATACGCGTCCTGGAGAGAGATGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001402.14 ENSMUST00000085311.13 |
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| CDS CCA 72 bp | TTAACCGGGGAACGATGGACGGAGGCTCCTCGGGGGTaGTTAACATCATCACATGGCCATCAGGAAAGAATC | + |
|
Preference number: 6 (lower is better) Translates to: LTGERWTEAPRG*LTSSHGHQERI Trigger: GATTCTTTCCTGATGGCCATGTGATGATGTTAACCACCCCCGAGGAGCCTCCGTCCATCGTTCCCCGGTTAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001402.14 ENSMUST00000085311.13 |
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| CDS CCA 72 bp | AATGACCCAGCAGAATTGCATCCGTTCTGGTGTTCCTaGTTCTTAACCGGGGAACGATGGACGGAGGCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: NDPAELHPFWCS*FLTGERWTEAP Trigger: AGGAGCCTCCGTCCATCGTTCCCCGGTTAAGAACCAGGAACACCAGAACGGATGCAATTCTGCTGGGTCATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001402.14 ENSMUST00000085311.13 |
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| CDS CCA 72 bp | GAGGCCTTTCCGAGAAGGCAGTGTAGCTCCTCACTCTaGCGAACAACAGGGGCGTGTACATCTTGTCAATCT | + |
|
Preference number: 6 (lower is better) Translates to: EAFPRRQCSSSL*RTTGACTSCQS Trigger: AGATTGACAAGATGTACACGCCCCTGTTGTTCGCCAGAGTGAGGAGCTACACTGCCTTCTCGGAAAGGCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001402.14 ENSMUST00000085311.13 |
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| CDS GCA 72 bp | GGAGCACAGCTGCAGTCCCACATGGAAGCTGTGATCTaGCTCTTGGACAGGAACACGACGAAAATACCTGTA | + |
|
Preference number: 6 (lower is better) Translates to: GAQLQSHMEAVI*LLDRNTTKIPV Trigger: TACAGGTATTTTCGTCGTGTTCCTGTCCAAGAGGCAGATCACAGCTTCCATGTGGGACTGCAGCTGTGCTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001402.14 ENSMUST00000085311.13 |
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| CDS CCA 72 bp | GCAAGGCCGAGTTTCTCCATGACTGGAGCCTACACCTaGGGTCAGTTCAAACATCCACTGAGCTCTGAACAT | + |
|
Preference number: 6 (lower is better) Translates to: ARPSFSMTGAYT*GQFKHPLSSEH Trigger: ATGTTCAGAGCTCAGTGGATGTTTGAACTGACCCCAGGTGTAGGCTCCAGTCATGGAGAAACTCGGCCTTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001402.14 ENSMUST00000085311.13 ENSMUST00000159099.8 ENSMUST00000162625.2 |
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| CDS CCA 72 bp | TTCTTCCTGCTCTGCAAGGCCGAGTTTCTCCATGACTaGAGCCTACACCTGGGGTCAGTTCAAACATCCACT | + |
|
Preference number: 6 (lower is better) Translates to: FFLLCKAEFLHD*SLHLGSVQTST Trigger: AGTGGATGTTTGAACTGACCCCAGGTGTAGGCTCCAGTCATGGAGAAACTCGGCCTTGCAGAGCAGGAAGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001402.14 ENSMUST00000085311.13 ENSMUST00000159099.8 ENSMUST00000162625.2 |
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| CDS CCA 72 bp | ACAAGCGGTAATGACCCAGCAGAATTGCATCCGTTCTaGTGTTCCTGGTTCTTAACCGGGGAACGATGGACG | + |
|
Preference number: 6 (lower is better) Translates to: TSGNDPAELHPF*CSWFLTGERWT Trigger: CGTCCATCGTTCCCCGGTTAAGAACCAGGAACACCAGAACGGATGCAATTCTGCTGGGTCATTACCGCTTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001402.14 ENSMUST00000085311.13 |
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| CDS TCA 72 bp | GTGACTGCTCTCCCTGGCGAATATACGTGGTTTTACTaGTGTACACTCCATCAAACCGAACTCGGGGCCGTT | + |
|
Preference number: 6 (lower is better) Translates to: VTALPGEYTWFY*CTLHQTELGAV Trigger: AACGGCCCCGAGTTCGGTTTGATGGAGTGTACATCAGTAAAACCACGTATATTCGCCAGGGAGAGCAGTCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001402.14 ENSMUST00000085311.13 |
||
| CDS CCA 72 bp | TGGAGACCGGGTGTAAGTGATCTTGAACTCAATGTCTaGCACCAGCTGCATCGCCCTACGGTAGAACTTGAT | + |
|
Preference number: 6 (lower is better) Translates to: WRPGVSDLELNV*HQLHRPTVELD Trigger: ATCAAGTTCTACCGTAGGGCGATGCAGCTGGTGCCAGACATTGAGTTCAAGATCACTTACACCCGGTCTCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001402.14 ENSMUST00000085311.13 ENSMUST00000159099.8 |
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| CDS CAA 90 bp | TCTGATTGTCTGCATCTTGTGACAAGCGGTAATGACCCAGCAGAATaGCATCCGTTCTGGTGTTCCTGGTTCTTAACCGGGGAACGATGG | + |
|
Preference number: 6 (lower is better) Translates to: SDCLHLVTSGNDPAE*HPFWCSWFLTGERW Trigger: CCATCGTTCCCCGGTTAAGAACCAGGAACACCAGAACGGATGCAATTCTGCTGGGTCATTACCGCTTGTCACAAGATGCAGACAATCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001402.14 ENSMUST00000085311.13 |
||
| CDS TCA 72 bp | ATCCTCTGCACACCAGTGACAACTGCTCTAACGATCTaGGGTCCAAGTCACTTGATACCACCCATCGGAAGA | + |
|
Preference number: 6 (lower is better) Translates to: ILCTPVTTALTI*GPSHLIPPIGR Trigger: TCTTCCGATGGGTGGTATCAAGTGACTTGGACCTCAGATCGTTAGAGCAGTTGTCACTGGTGTGCAGAGGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001402.14 ENSMUST00000085311.13 |
||
| CDS TCA 72 bp | TTCCACTTGGTGCCACGCCCTGTAGAAACCATCAAGTaGCTGCTCTCCCTGGCGAATATACGTGGTTTTACT | + |
|
Preference number: 6 (lower is better) Translates to: FHLVPRPVETIK*LLSLANIRGFT Trigger: AGTAAAACCACGTATATTCGCCAGGGAGAGCAGTCACTTGATGGTTTCTACAGGGCGTGGCACCAAGTGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001402.14 ENSMUST00000085311.13 |
||
| CDS GCA 72 bp | TTCTTCCTTTGCCAGTTCCTGTCGTCCTTTGGTGTCTaGAGCTGCTTTCAGCATAGAGCTTCTTCCTGCTCT | + |
|
Preference number: 6 (lower is better) Translates to: FFLCQFLSSFGV*SCFQHRASSCS Trigger: AGAGCAGGAAGAAGCTCTATGCTGAAAGCAGCTGCAGACACCAAAGGACGACAGGAACTGGCAAAGGAAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001402.14 ENSMUST00000085311.13 ENSMUST00000159099.8 ENSMUST00000162625.2 |
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| CDS TCA 72 bp | TACAGCAAAGACTTTGGTCTGATTGTCTGCATCTTGTaGCAAGCGGTAATGACCCAGCAGAATTGCATCCGT | + |
|
Preference number: 6 (lower is better) Translates to: YSKDFGLIVCIL*QAVMTQQNCIR Trigger: ACGGATGCAATTCTGCTGGGTCATTACCGCTTGTCACAAGATGCAGACAATCAGACCAAAGTCTTTGCTGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001402.14 ENSMUST00000085311.13 |
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