Pregenerated sensors for FBXO6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000055401Ensembl transcript IDs: ENSMUST00000030858.14, ENSMUST00000056965.12, ENSMUST00000105706.8, ENSMUST00000126615.8, ENSMUST00000132083.2, ENSMUST00000134261.2, ENSMUST00000152098.8, ENSMUST00000168503.8
Found 104 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TTATTACAACAAAATGTCAGAGCTGTGGGTGCCAACTATCACTACTaGGTTGATGGGCTTGCCCAAGGTTGTATAGGGCAAGTGCTCATG | + |
|
Preference number: 1 (lower is better) Translates to: LLQQNVRAVGANYHY*VDGLAQGCIGQVLM Trigger: CATGAGCACTTGCCCTATACAACCTTGGGCAAGCCCATCAACTCAGTAGTGATAGTTGGCACCCACAGCTCTGACATTTTGTTGTAATAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030858.14 ENSMUST00000056965.12 ENSMUST00000105706.8 ENSMUST00000168503.8 |
||
| 3UTR CCA 90 bp | GGCTGGGTTACTGAAAACATTTATTACAACAAAATGTCAGAGCTGTaGGTGCCAACTATCACTACTGAGTTGATGGGCTTGCCCAAGGTT | + |
|
Preference number: 1 (lower is better) Translates to: GWVTENIYYNKMSEL*VPTITTELMGLPKV Trigger: AACCTTGGGCAAGCCCATCAACTCAGTAGTGATAGTTGGCACCCACAGCTCTGACATTTTGTTGTAATAAATGTTTTCAGTAACCCAGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000105706.8 ENSMUST00000168503.8 |
||
| 3UTR-3UTR TCA 90 bp | CAGCAACCCACCTGTAAGCCCTCAAACCAGGCTGGGTTACTGAAAACATTTATTCTATCACTACTGAGTTaGTGGGCTTGCCCAAGGTTG | + |
|
Preference number: 2 (lower is better) Translates to: QQPTCKPSNQAGLLKTFILSLLS*WACPRL Trigger: CAACCTTGGGCAAGCCCATCAACTCAGTAGTGATAG...AATAAATGTTTTCAGTAACCCAGCCTGGTTTGAGGGCTTACAGGTGGGTTGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105706.8 ENSMUST00000168503.8 |
||
| 3UTR GCA 72 bp | ATCGAAGCTGCCCTGAGAAGGGGCTCTTTCTCAGAGTaGCAGCAACCCACCTGTAAGCCCTCAAACCAGGCT | + |
|
Preference number: 3 (lower is better) Translates to: IEAALRRGSFSE*QQPTCKPSNQA Trigger: AGCCTGGTTTGAGGGCTTACAGGTGGGTTGCTGGCACTCTGAGAAAGAGCCCCTTCTCAGGGCAGCTTCGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105706.8 ENSMUST00000168503.8 |
||
| 3UTR CCA 72 bp | ACTGAAAACATTTATTACAACAAAATGTCAGAGCTGTaGGTGCCAACTATCACTACTGAGTTGATGGGCTTG | + |
|
Preference number: 3 (lower is better) Translates to: TENIYYNKMSEL*VPTITTELMGL Trigger: CAAGCCCATCAACTCAGTAGTGATAGTTGGCACCCACAGCTCTGACATTTTGTTGTAATAAATGTTTTCAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000030858.14 ENSMUST00000056965.12 ENSMUST00000105706.8 ENSMUST00000168503.8 |
||
| CDS-3UTR TCA 90 bp | AGAAGGGGCTCTTTCTCAGAGTGCCAGCAACCCACCTGTAAGCCCTCAAACCAGCAGCCTTTCCAGAACTaGGTGTCCTGGCCCCCGTGT | + |
|
Preference number: 4 (lower is better) Translates to: RRGSFSECQQPTCKPSNQQPFQN*VSWPPC Trigger: ACACGGGGGCCAGGACACTCAGTTCTGGAAAGGCTG...CTGGTTTGAGGGCTTACAGGTGGGTTGCTGGCACTCTGAGAAAGAGCCCCTTCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000105706.8 ENSMUST00000168503.8 |
||
| CDS-3UTR CCA 90 bp | AGAAGGGGCTCTTTCTCAGAGTGCCAGCAACCCACCTGTAAGCCCTCAAACCAGAGCGATCCCCTCCGTTaGAGTCTATCCGCCATGAGC | + |
|
Preference number: 4 (lower is better) Translates to: RRGSFSECQQPTCKPSNQSDPLR*SLSAMS Trigger: GCTCATGGCGGATAGACTCCAACGGAGGGGATCGCT...CTGGTTTGAGGGCTTACAGGTGGGTTGCTGGCACTCTGAGAAAGAGCCCCTTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000105706.8 ENSMUST00000168503.8 |
||
| CDS-3UTR TCA 90 bp | AGAAGGGGCTCTTTCTCAGAGTGCCAGCAACCCACCTGTAAGCCCTCAAACCAGGGAGTCTATCCGCCATaGGCTCAGGTTCTCTTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: RRGSFSECQQPTCKPSNQGVYPP*AQVLFS Trigger: GCTGAAGAGAACCTGAGCTCATGGCGGATAGACTCC...CTGGTTTGAGGGCTTACAGGTGGGTTGCTGGCACTCTGAGAAAGAGCCCCTTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105706.8 ENSMUST00000168503.8 |
||
| CDS-3UTR TCA 90 bp | TGGGCTTGCCCAAGGTTGTATAGGGCAAGTGCTCATGGGACTGGGAGCCTGACTAGTAGCCCTCAGCTTTaGGGTCCACCATCTGGGATT | + |
|
Preference number: 4 (lower is better) Translates to: WACPRLYRASAHGTGSLTSSPQL*GPPSGI Trigger: AATCCCAGATGGTGGACCTCAAAGCTGAGGGCTACT...AGTCAGGCTCCCAGTCCCATGAGCACTTGCCCTATACAACCTTGGGCAAGCCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030858.14 ENSMUST00000056965.12 ENSMUST00000105706.8 ENSMUST00000168503.8 |
||
| CDS-3UTR GCA 90 bp | TGGGCTTGCCCAAGGTTGTATAGGGCAAGTGCTCATGGGACTGGGAGCCTGACTGGTTCCTCTGCAGGCTaGACAGGATATAGAAGACCT | + |
|
Preference number: 4 (lower is better) Translates to: WACPRLYRASAHGTGSLTGSSAG*TGYRRP Trigger: AGGTCTTCTATATCCTGTGCAGCCTGCAGAGGAACC...AGTCAGGCTCCCAGTCCCATGAGCACTTGCCCTATACAACCTTGGGCAAGCCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030858.14 ENSMUST00000056965.12 ENSMUST00000105706.8 ENSMUST00000168503.8 |
||
| CDS-3UTR CCA 90 bp | CTTTCTCAGAGTGCCAGCAACCCACCTGTAAGCCCTCAAACCAGGCTGGGTTACCAGGAGAATGTTCTCTaGCAGCTCGTTGATGTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: LSQSASNPPVSPQTRLGYQENVL*QLVDVD Trigger: GTCCACATCAACGAGCTGCCAGAGAACATTCTCCTG...GTAACCCAGCCTGGTTTGAGGGCTTACAGGTGGGTTGCTGGCACTCTGAGAAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105706.8 ENSMUST00000168503.8 |
||
| CDS-3UTR CCA 90 bp | TGGGCTTGCCCAAGGTTGTATAGGGCAAGTGCTCATGGGACTGGGAGCCTGACTTTCTTGGCTGTCCTGTaGCTGATAATGATGCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: WACPRLYRASAHGTGSLTFLAVL*LIMMLL Trigger: CAGCAGCATCATTATCAGCCACAGGACAGCCAAGAA...AGTCAGGCTCCCAGTCCCATGAGCACTTGCCCTATACAACCTTGGGCAAGCCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030858.14 ENSMUST00000056965.12 ENSMUST00000105706.8 ENSMUST00000168503.8 |
||
| CDS-3UTR CCA 90 bp | GAAGGGGCTCTTTCTCAGAGTGCCAGCAACCCACCTGTAAGCCCTCAAACCAGGTTCTTGGCTGTCCTGTaGCTGATAATGATGCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: EGALSQSASNPPVSPQTRFLAVL*LIMMLL Trigger: CAGCAGCATCATTATCAGCCACAGGACAGCCAAGAA...CCTGGTTTGAGGGCTTACAGGTGGGTTGCTGGCACTCTGAGAAAGAGCCCCTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105706.8 ENSMUST00000168503.8 |
||
| CDS-3UTR GCA 90 bp | TCAGAGTGCCAGCAACCCACCTGTAAGCCCTCAAACCAGGCTGGGTTACTGAAAGGTTCCTCTGCAGGCTaGACAGGATATAGAAGACCT | + |
|
Preference number: 4 (lower is better) Translates to: SECQQPTCKPSNQAGLLKGSSAG*TGYRRP Trigger: AGGTCTTCTATATCCTGTGCAGCCTGCAGAGGAACC...TTTCAGTAACCCAGCCTGGTTTGAGGGCTTACAGGTGGGTTGCTGGCACTCTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105706.8 ENSMUST00000168503.8 |
||
| CDS-3UTR GCA 90 bp | CTTTCTCAGAGTGCCAGCAACCCACCTGTAAGCCCTCAAACCAGGCTGGGTTACGTGTGGGAAATCTCTTaGCATTTGGCATCATTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: LSQSASNPPVSPQTRLGYVWEIS*HLASFH Trigger: GTGGAATGATGCCAAATGGCAAGAGATTTCCCACAC...GTAACCCAGCCTGGTTTGAGGGCTTACAGGTGGGTTGCTGGCACTCTGAGAAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105706.8 ENSMUST00000168503.8 |
||
| CDS-3UTR CCA 90 bp | CAGCAACCCACCTGTAAGCCCTCAAACCAGGCTGGGTTACTGAAAACATTTATTAACCCTCATGAGTGTTaGAGTCCGAAGCTCGCCGTC | + |
|
Preference number: 4 (lower is better) Translates to: QQPTCKPSNQAGLLKTFINPHEC*SPKLAV Trigger: GACGGCGAGCTTCGGACTCCAACACTCATGAGGGTT...AATAAATGTTTTCAGTAACCCAGCCTGGTTTGAGGGCTTACAGGTGGGTTGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105706.8 ENSMUST00000168503.8 |
||
| CDS-3UTR TCA 90 bp | TATTACAACAAAATGTCAGAGCTGTGGGTGCCAACTATCACTACTGAGTTGATGCAGCCTTTCCAGAACTaGGTGTCCTGGCCCCCGTGT | + |
|
Preference number: 4 (lower is better) Translates to: YYNKMSELWVPTITTELMQPFQN*VSWPPC Trigger: ACACGGGGGCCAGGACACTCAGTTCTGGAAAGGCTG...CATCAACTCAGTAGTGATAGTTGGCACCCACAGCTCTGACATTTTGTTGTAATA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000030858.14 ENSMUST00000056965.12 ENSMUST00000105706.8 ENSMUST00000168503.8 |
||
| CDS-3UTR GCA 90 bp | GGGTTACTGAAAACATTTATTACAACAAAATGTCAGAGCTGTGGGTGCCAACTAGGTGCAGCCACAGTCTaGTCTGGGGGCAACCCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: GLLKTFITTKCQSCGCQLGAATV*SGGNPV Trigger: GACTGGGTTGCCCCCAGAGCAGACTGTGGCTGCACC...TAGTTGGCACCCACAGCTCTGACATTTTGTTGTAATAAATGTTTTCAGTAACCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000030858.14 ENSMUST00000056965.12 ENSMUST00000105706.8 ENSMUST00000168503.8 |
||
| CDS-3UTR CCA 90 bp | CTTTCTCAGAGTGCCAGCAACCCACCTGTAAGCCCTCAAACCAGGCTGGGTTACAAATCTCTTGCCATTTaGCATCATTCCACTGTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: LSQSASNPPVSPQTRLGYKSLAI*HHSTVG Trigger: TCCAACAGTGGAATGATGCCAAATGGCAAGAGATTT...GTAACCCAGCCTGGTTTGAGGGCTTACAGGTGGGTTGCTGGCACTCTGAGAAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105706.8 ENSMUST00000168503.8 |
||
| CDS-3UTR TCA 90 bp | ATTTATTACAACAAAATGTCAGAGCTGTGGGTGCCAACTATCACTACTGAGTTGCAGCCTTTCCAGAACTaGGTGTCCTGGCCCCCGTGT | + |
|
Preference number: 4 (lower is better) Translates to: IYYNKMSELWVPTITTELQPFQN*VSWPPC Trigger: ACACGGGGGCCAGGACACTCAGTTCTGGAAAGGCTG...CAACTCAGTAGTGATAGTTGGCACCCACAGCTCTGACATTTTGTTGTAATAAAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000030858.14 ENSMUST00000056965.12 ENSMUST00000105706.8 ENSMUST00000168503.8 |
||
| CDS-3UTR CCA 90 bp | TCAGAGTGCCAGCAACCCACCTGTAAGCCCTCAAACCAGGCTGGGTTACTGAAAAAATCTCTTGCCATTTaGCATCATTCCACTGTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: SECQQPTCKPSNQAGLLKKSLAI*HHSTVG Trigger: TCCAACAGTGGAATGATGCCAAATGGCAAGAGATTT...TTTCAGTAACCCAGCCTGGTTTGAGGGCTTACAGGTGGGTTGCTGGCACTCTGA 48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000105706.8 ENSMUST00000168503.8 |
||
| CDS-3UTR CCA 90 bp | ACATTTATTACAACAAAATGTCAGAGCTGTGGGTGCCAACTATCACTACTGAGTGTTGCGCAGCAGCTGTaGGGCCGGGATATGGATGAA | + |
|
Preference number: 4 (lower is better) Translates to: TFITTKCQSCGCQLSLLSVAQQL*GRDMDE Trigger: TTCATCCATATCCCGGCCCCACAGCTGCTGCGCAAC...ACTCAGTAGTGATAGTTGGCACCCACAGCTCTGACATTTTGTTGTAATAAATGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030858.14 ENSMUST00000056965.12 ENSMUST00000105706.8 ENSMUST00000168503.8 |
||
| CDS-3UTR CCA 90 bp | AACATTTATTACAACAAAATGTCAGAGCTGTGGGTGCCAACTATCACTACTGAGAGCGATCCCCTCCGTTaGAGTCTATCCGCCATGAGC | + |
|
Preference number: 4 (lower is better) Translates to: NIYYNKMSELWVPTITTESDPLR*SLSAMS Trigger: GCTCATGGCGGATAGACTCCAACGGAGGGGATCGCT...CTCAGTAGTGATAGTTGGCACCCACAGCTCTGACATTTTGTTGTAATAAATGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000030858.14 ENSMUST00000056965.12 ENSMUST00000105706.8 ENSMUST00000168503.8 |
||
| CDS-3UTR CCA 90 bp | ATTTATTACAACAAAATGTCAGAGCTGTGGGTGCCAACTATCACTACTGAGTTGAGCGATCCCCTCCGTTaGAGTCTATCCGCCATGAGC | + |
|
Preference number: 4 (lower is better) Translates to: IYYNKMSELWVPTITTELSDPLR*SLSAMS Trigger: GCTCATGGCGGATAGACTCCAACGGAGGGGATCGCT...CAACTCAGTAGTGATAGTTGGCACCCACAGCTCTGACATTTTGTTGTAATAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000030858.14 ENSMUST00000056965.12 ENSMUST00000105706.8 ENSMUST00000168503.8 |
||
| CDS-3UTR CCA 90 bp | TATTACAACAAAATGTCAGAGCTGTGGGTGCCAACTATCACTACTGAGTTGATGAACCCTCATGAGTGTTaGAGTCCGAAGCTCGCCGTC | + |
|
Preference number: 4 (lower is better) Translates to: YYNKMSELWVPTITTELMNPHEC*SPKLAV Trigger: GACGGCGAGCTTCGGACTCCAACACTCATGAGGGTT...CATCAACTCAGTAGTGATAGTTGGCACCCACAGCTCTGACATTTTGTTGTAATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030858.14 ENSMUST00000056965.12 ENSMUST00000105706.8 ENSMUST00000168503.8 |
||
| CDS-3UTR TCA 90 bp | AACATTTATTACAACAAAATGTCAGAGCTGTGGGTGCCAACTATCACTACTGAGGGAGTCTATCCGCCATaGGCTCAGGTTCTCTTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: NIYYNKMSELWVPTITTEGVYPP*AQVLFS Trigger: GCTGAAGAGAACCTGAGCTCATGGCGGATAGACTCC...CTCAGTAGTGATAGTTGGCACCCACAGCTCTGACATTTTGTTGTAATAAATGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030858.14 ENSMUST00000056965.12 ENSMUST00000105706.8 ENSMUST00000168503.8 |
||
| CDS-3UTR TCA 90 bp | ATTTATTACAACAAAATGTCAGAGCTGTGGGTGCCAACTATCACTACTGAGTTGGGAGTCTATCCGCCATaGGCTCAGGTTCTCTTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: IYYNKMSELWVPTITTELGVYPP*AQVLFS Trigger: GCTGAAGAGAACCTGAGCTCATGGCGGATAGACTCC...CAACTCAGTAGTGATAGTTGGCACCCACAGCTCTGACATTTTGTTGTAATAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030858.14 ENSMUST00000056965.12 ENSMUST00000105706.8 ENSMUST00000168503.8 |
||
| CDS-3UTR TCA 90 bp | GGGTTACTGAAAACATTTATTACAACAAAATGTCAGAGCTGTGGGTGCCAACTAGGAGTCTATCCGCCATaGGCTCAGGTTCTCTTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: GLLKTFITTKCQSCGCQLGVYPP*AQVLFS Trigger: GCTGAAGAGAACCTGAGCTCATGGCGGATAGACTCC...TAGTTGGCACCCACAGCTCTGACATTTTGTTGTAATAAATGTTTTCAGTAACCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000030858.14 ENSMUST00000056965.12 ENSMUST00000105706.8 ENSMUST00000168503.8 |
||
| CDS-3UTR GCA 90 bp | CAGCAACCCACCTGTAAGCCCTCAAACCAGGCTGGGTTACTGAAAACATTTATTGTGTGGGAAATCTCTTaGCATTTGGCATCATTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: QQPTCKPSNQAGLLKTFIVWEIS*HLASFH Trigger: GTGGAATGATGCCAAATGGCAAGAGATTTCCCACAC...AATAAATGTTTTCAGTAACCCAGCCTGGTTTGAGGGCTTACAGGTGGGTTGCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105706.8 ENSMUST00000168503.8 |
||
| CDS-3UTR CCA 90 bp | GTTACTGAAAACATTTATTACAACAAAATGTCAGAGCTGTGGGTGCCAACTATCAGCGATCCCCTCCGTTaGAGTCTATCCGCCATGAGC | + |
|
Preference number: 4 (lower is better) Translates to: VTENIYYNKMSELWVPTISDPLR*SLSAMS Trigger: GCTCATGGCGGATAGACTCCAACGGAGGGGATCGCT...GATAGTTGGCACCCACAGCTCTGACATTTTGTTGTAATAAATGTTTTCAGTAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000030858.14 ENSMUST00000056965.12 ENSMUST00000105706.8 ENSMUST00000168503.8 |
||
| CDS-3UTR CCA 90 bp | ACATTTATTACAACAAAATGTCAGAGCTGTGGGTGCCAACTATCACTACTGAGTAACCCTCATGAGTGTTaGAGTCCGAAGCTCGCCGTC | + |
|
Preference number: 4 (lower is better) Translates to: TFITTKCQSCGCQLSLLSNPHEC*SPKLAV Trigger: GACGGCGAGCTTCGGACTCCAACACTCATGAGGGTT...ACTCAGTAGTGATAGTTGGCACCCACAGCTCTGACATTTTGTTGTAATAAATGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030858.14 ENSMUST00000056965.12 ENSMUST00000105706.8 ENSMUST00000168503.8 |
||
| CDS-3UTR TCA 90 bp | GGGTTACTGAAAACATTTATTACAACAAAATGTCAGAGCTGTGGGTGCCAACTAAGTAGCCCTCAGCTTTaGGGTCCACCATCTGGGATT | + |
|
Preference number: 4 (lower is better) Translates to: GLLKTFITTKCQSCGCQLSSPQL*GPPSGI Trigger: AATCCCAGATGGTGGACCTCAAAGCTGAGGGCTACT...TAGTTGGCACCCACAGCTCTGACATTTTGTTGTAATAAATGTTTTCAGTAACCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000030858.14 ENSMUST00000056965.12 ENSMUST00000105706.8 ENSMUST00000168503.8 |
||
| CDS-3UTR TCA 90 bp | ACATTTATTACAACAAAATGTCAGAGCTGTGGGTGCCAACTATCACTACTGAGTAGTAGCCCTCAGCTTTaGGGTCCACCATCTGGGATT | + |
|
Preference number: 4 (lower is better) Translates to: TFITTKCQSCGCQLSLLSSSPQL*GPPSGI Trigger: AATCCCAGATGGTGGACCTCAAAGCTGAGGGCTACT...ACTCAGTAGTGATAGTTGGCACCCACAGCTCTGACATTTTGTTGTAATAAATGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030858.14 ENSMUST00000056965.12 ENSMUST00000105706.8 ENSMUST00000168503.8 |
||
| CDS-3UTR TCA 90 bp | AACATTTATTACAACAAAATGTCAGAGCTGTGGGTGCCAACTATCACTACTGAGAGTAGCCCTCAGCTTTaGGGTCCACCATCTGGGATT | + |
|
Preference number: 4 (lower is better) Translates to: NIYYNKMSELWVPTITTESSPQL*GPPSGI Trigger: AATCCCAGATGGTGGACCTCAAAGCTGAGGGCTACT...CTCAGTAGTGATAGTTGGCACCCACAGCTCTGACATTTTGTTGTAATAAATGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030858.14 ENSMUST00000056965.12 ENSMUST00000105706.8 ENSMUST00000168503.8 |
||
| CDS-3UTR CCA 90 bp | TATTACAACAAAATGTCAGAGCTGTGGGTGCCAACTATCACTACTGAGTTGATGCAGGAGAATGTTCTCTaGCAGCTCGTTGATGTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: YYNKMSELWVPTITTELMQENVL*QLVDVD Trigger: GTCCACATCAACGAGCTGCCAGAGAACATTCTCCTG...CATCAACTCAGTAGTGATAGTTGGCACCCACAGCTCTGACATTTTGTTGTAATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030858.14 ENSMUST00000056965.12 ENSMUST00000105706.8 ENSMUST00000168503.8 |
||
| CDS-3UTR CCA 90 bp | TTACTGAAAACATTTATTACAACAAAATGTCAGAGCTGTGGGTGCCAACTATCAGTTGCGCAGCAGCTGTaGGGCCGGGATATGGATGAA | + |
|
Preference number: 4 (lower is better) Translates to: LLKTFITTKCQSCGCQLSVAQQL*GRDMDE Trigger: TTCATCCATATCCCGGCCCCACAGCTGCTGCGCAAC...TGATAGTTGGCACCCACAGCTCTGACATTTTGTTGTAATAAATGTTTTCAGTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000030858.14 ENSMUST00000056965.12 ENSMUST00000105706.8 ENSMUST00000168503.8 |
||
| CDS-3UTR TCA 90 bp | ATTTATTACAACAAAATGTCAGAGCTGTGGGTGCCAACTATCACTACTGAGTTGCCACCATCTGGGATTTaGGGCACATCTCAAAAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: IYYNKMSELWVPTITTELPPSGI*GTSQKR Trigger: CCTCTTTTGAGATGTGCCTCAAATCCCAGATGGTGG...CAACTCAGTAGTGATAGTTGGCACCCACAGCTCTGACATTTTGTTGTAATAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000030858.14 ENSMUST00000056965.12 ENSMUST00000105706.8 ENSMUST00000168503.8 |
||
| CDS-3UTR GCA 90 bp | ATTTATTACAACAAAATGTCAGAGCTGTGGGTGCCAACTATCACTACTGAGTTGGGTTCCTCTGCAGGCTaGACAGGATATAGAAGACCT | + |
|
Preference number: 4 (lower is better) Translates to: IYYNKMSELWVPTITTELGSSAG*TGYRRP Trigger: AGGTCTTCTATATCCTGTGCAGCCTGCAGAGGAACC...CAACTCAGTAGTGATAGTTGGCACCCACAGCTCTGACATTTTGTTGTAATAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030858.14 ENSMUST00000056965.12 ENSMUST00000105706.8 ENSMUST00000168503.8 |
||
| CDS-3UTR CCA 90 bp | ACATTTATTACAACAAAATGTCAGAGCTGTGGGTGCCAACTATCACTACTGAGTCAGGAGAATGTTCTCTaGCAGCTCGTTGATGTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: TFITTKCQSCGCQLSLLSQENVL*QLVDVD Trigger: GTCCACATCAACGAGCTGCCAGAGAACATTCTCCTG...ACTCAGTAGTGATAGTTGGCACCCACAGCTCTGACATTTTGTTGTAATAAATGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030858.14 ENSMUST00000056965.12 ENSMUST00000105706.8 ENSMUST00000168503.8 |
||
| CDS-3UTR CCA 90 bp | ATTTATTACAACAAAATGTCAGAGCTGTGGGTGCCAACTATCACTACTGAGTTGGCATCATTCCACTGTTaGAATGTCACAGGTGGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: IYYNKMSELWVPTITTELASFHC*NVTGGG Trigger: GCCTCCACCTGTGACATTCCAACAGTGGAATGATGC...CAACTCAGTAGTGATAGTTGGCACCCACAGCTCTGACATTTTGTTGTAATAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030858.14 ENSMUST00000056965.12 ENSMUST00000105706.8 ENSMUST00000168503.8 |
||
| CDS-3UTR CCA 90 bp | GGGTTACTGAAAACATTTATTACAACAAAATGTCAGAGCTGTGGGTGCCAACTAGCATCATTCCACTGTTaGAATGTCACAGGTGGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: GLLKTFITTKCQSCGCQLASFHC*NVTGGG Trigger: GCCTCCACCTGTGACATTCCAACAGTGGAATGATGC...TAGTTGGCACCCACAGCTCTGACATTTTGTTGTAATAAATGTTTTCAGTAACCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000030858.14 ENSMUST00000056965.12 ENSMUST00000105706.8 ENSMUST00000168503.8 |
||
| CDS-3UTR CCA 90 bp | TTACTGAAAACATTTATTACAACAAAATGTCAGAGCTGTGGGTGCCAACTATCAAACCCTCATGAGTGTTaGAGTCCGAAGCTCGCCGTC | + |
|
Preference number: 4 (lower is better) Translates to: LLKTFITTKCQSCGCQLSNPHEC*SPKLAV Trigger: GACGGCGAGCTTCGGACTCCAACACTCATGAGGGTT...TGATAGTTGGCACCCACAGCTCTGACATTTTGTTGTAATAAATGTTTTCAGTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000030858.14 ENSMUST00000056965.12 ENSMUST00000105706.8 ENSMUST00000168503.8 |
||
| CDS-3UTR GCA 90 bp | TTACTGAAAACATTTATTACAACAAAATGTCAGAGCTGTGGGTGCCAACTATCAGGTTCCTCTGCAGGCTaGACAGGATATAGAAGACCT | + |
|
Preference number: 4 (lower is better) Translates to: LLKTFITTKCQSCGCQLSGSSAG*TGYRRP Trigger: AGGTCTTCTATATCCTGTGCAGCCTGCAGAGGAACC...TGATAGTTGGCACCCACAGCTCTGACATTTTGTTGTAATAAATGTTTTCAGTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000030858.14 ENSMUST00000056965.12 ENSMUST00000105706.8 ENSMUST00000168503.8 |
||
| CDS-3UTR GCA 90 bp | ACATTTATTACAACAAAATGTCAGAGCTGTGGGTGCCAACTATCACTACTGAGTGTGTGGGAAATCTCTTaGCATTTGGCATCATTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: TFITTKCQSCGCQLSLLSVWEIS*HLASFH Trigger: GTGGAATGATGCCAAATGGCAAGAGATTTCCCACAC...ACTCAGTAGTGATAGTTGGCACCCACAGCTCTGACATTTTGTTGTAATAAATGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030858.14 ENSMUST00000056965.12 ENSMUST00000105706.8 ENSMUST00000168503.8 |
||
| CDS-3UTR GCA 90 bp | AACATTTATTACAACAAAATGTCAGAGCTGTGGGTGCCAACTATCACTACTGAGGTGTGGGAAATCTCTTaGCATTTGGCATCATTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: NIYYNKMSELWVPTITTEVWEIS*HLASFH Trigger: GTGGAATGATGCCAAATGGCAAGAGATTTCCCACAC...CTCAGTAGTGATAGTTGGCACCCACAGCTCTGACATTTTGTTGTAATAAATGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030858.14 ENSMUST00000056965.12 ENSMUST00000105706.8 ENSMUST00000168503.8 |
||
| CDS-3UTR CCA 90 bp | TTACTGAAAACATTTATTACAACAAAATGTCAGAGCTGTGGGTGCCAACTATCAGCATCATTCCACTGTTaGAATGTCACAGGTGGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: LLKTFITTKCQSCGCQLSASFHC*NVTGGG Trigger: GCCTCCACCTGTGACATTCCAACAGTGGAATGATGC...TGATAGTTGGCACCCACAGCTCTGACATTTTGTTGTAATAAATGTTTTCAGTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000030858.14 ENSMUST00000056965.12 ENSMUST00000105706.8 ENSMUST00000168503.8 |
||
| CDS-3UTR CCA 90 bp | GTTACTGAAAACATTTATTACAACAAAATGTCAGAGCTGTGGGTGCCAACTATCTTCTTGGCTGTCCTGTaGCTGATAATGATGCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: VTENIYYNKMSELWVPTIFLAVL*LIMMLL Trigger: CAGCAGCATCATTATCAGCCACAGGACAGCCAAGAA...GATAGTTGGCACCCACAGCTCTGACATTTTGTTGTAATAAATGTTTTCAGTAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000030858.14 ENSMUST00000056965.12 ENSMUST00000105706.8 ENSMUST00000168503.8 |
||
| CDS-3UTR CCA 90 bp | TTACTGAAAACATTTATTACAACAAAATGTCAGAGCTGTGGGTGCCAACTATCAAAATCTCTTGCCATTTaGCATCATTCCACTGTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: LLKTFITTKCQSCGCQLSKSLAI*HHSTVG Trigger: TCCAACAGTGGAATGATGCCAAATGGCAAGAGATTT...TGATAGTTGGCACCCACAGCTCTGACATTTTGTTGTAATAAATGTTTTCAGTAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000030858.14 ENSMUST00000056965.12 ENSMUST00000105706.8 ENSMUST00000168503.8 |
||
| CDS CCA 90 bp | CACAGCTCCCAGGGAGCGTCTCCACCTTCCAGCGATCCCCTCCGTTaGAGTCTATCCGCCATGAGCTCAGGTTCTCTTCAGCACACGGGT | + |
|
Preference number: 5 (lower is better) Translates to: HSSQGASPPSSDPLR*SLSAMSSGSLQHTG Trigger: ACCCGTGTGCTGAAGAGAACCTGAGCTCATGGCGGATAGACTCCAACGGAGGGGATCGCTGGAAGGTGGAGACGCTCCCTGGGAGCTGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000030858.14 ENSMUST00000056965.12 ENSMUST00000105706.8 ENSMUST00000126615.8 ENSMUST00000134261.2 ENSMUST00000152098.8 ENSMUST00000168503.8 |
||
| CDS-3UTR CAA 90 bp | TGGGCTTGCCCAAGGTTGTATAGGGCAAGTGCTCATGGGACTGGGAGCCTGACTCAGCGATCCCCTCCGTaGGAGTCTATCCGCCATGAG | + |
|
Preference number: 5 (lower is better) Translates to: WACPRLYRASAHGTGSLTQRSPP*ESIRHE Trigger: CTCATGGCGGATAGACTCCAACGGAGGGGATCGCTG...AGTCAGGCTCCCAGTCCCATGAGCACTTGCCCTATACAACCTTGGGCAAGCCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030858.14 ENSMUST00000056965.12 ENSMUST00000105706.8 ENSMUST00000168503.8 |
||
| CDS-3UTR CAA 90 bp | TGGGCTTGCCCAAGGTTGTATAGGGCAAGTGCTCATGGGACTGGGAGCCTGACTGCAGGGGGAGGGTTCTaGGCTGTCCTGTGGCTGATA | + |
|
Preference number: 5 (lower is better) Translates to: WACPRLYRASAHGTGSLTAGGGF*AVLWLI Trigger: TATCAGCCACAGGACAGCCAAGAACCCTCCCCCTGC...AGTCAGGCTCCCAGTCCCATGAGCACTTGCCCTATACAACCTTGGGCAAGCCCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000030858.14 ENSMUST00000056965.12 ENSMUST00000105706.8 ENSMUST00000168503.8 |
||
| CDS-3UTR CAA 90 bp | AGAAGGGGCTCTTTCTCAGAGTGCCAGCAACCCACCTGTAAGCCCTCAAACCAGCAGCGATCCCCTCCGTaGGAGTCTATCCGCCATGAG | + |
|
Preference number: 5 (lower is better) Translates to: RRGSFSECQQPTCKPSNQQRSPP*ESIRHE Trigger: CTCATGGCGGATAGACTCCAACGGAGGGGATCGCTG...CTGGTTTGAGGGCTTACAGGTGGGTTGCTGGCACTCTGAGAAAGAGCCCCTTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000105706.8 ENSMUST00000168503.8 |
||
| CDS-3UTR CAA 90 bp | GAAGGGGCTCTTTCTCAGAGTGCCAGCAACCCACCTGTAAGCCCTCAAACCAGGGGCATCATTCCACTGTaGGAATGTCACAGGTGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: EGALSQSASNPPVSPQTRGIIPL*ECHRWR Trigger: CCTCCACCTGTGACATTCCAACAGTGGAATGATGCC...CCTGGTTTGAGGGCTTACAGGTGGGTTGCTGGCACTCTGAGAAAGAGCCCCTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000105706.8 ENSMUST00000168503.8 |
||
| CDS CCA 90 bp | CTGAGTGTCCTGGCCCCCGTGTTGAAAAAGGATGTGACGGACACCTaGAGGGTAATCAGAGAAGGTGTGGGAAATCTCTTGCCATTTGGC | + |
|
Preference number: 5 (lower is better) Translates to: LSVLAPVLKKDVTDT*RVIREGVGNLLPFG Trigger: GCCAAATGGCAAGAGATTTCCCACACCTTCTCTGATTACCCTCCAGGTGTCCGTCACATCCTTTTTCAACACGGGGGCCAGGACACTCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 6 transcripts: ENSMUST00000030858.14 ENSMUST00000056965.12 ENSMUST00000105706.8 ENSMUST00000126615.8 ENSMUST00000152098.8 ENSMUST00000168503.8 |
||
| CDS-3UTR CAA 90 bp | TGGGCTTGCCCAAGGTTGTATAGGGCAAGTGCTCATGGGACTGGGAGCCTGACTGGTGTGGGAAATCTCTaGCCATTTGGCATCATTCCA | + |
|
Preference number: 5 (lower is better) Translates to: WACPRLYRASAHGTGSLTGVGNL*PFGIIP Trigger: TGGAATGATGCCAAATGGCAAGAGATTTCCCACACC...AGTCAGGCTCCCAGTCCCATGAGCACTTGCCCTATACAACCTTGGGCAAGCCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030858.14 ENSMUST00000056965.12 ENSMUST00000105706.8 ENSMUST00000168503.8 |
||
| CDS-3UTR CAA 90 bp | CAGCAACCCACCTGTAAGCCCTCAAACCAGGCTGGGTTACTGAAAACATTTATTCAGCTGTACCCGGAGTaGATAGGTGCAGCCACAGTC | + |
|
Preference number: 5 (lower is better) Translates to: QQPTCKPSNQAGLLKTFIQLYPE*IGAATV Trigger: GACTGTGGCTGCACCTATCAACTCCGGGTACAGCTG...AATAAATGTTTTCAGTAACCCAGCCTGGTTTGAGGGCTTACAGGTGGGTTGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105706.8 ENSMUST00000168503.8 |
||
| CDS CCA 90 bp | AATCTCTTGCCATTTGGCATCATTCCACTGTTGGAATGTCACAGGTaGAGGCTCAAAAGAGGCCAAGACAATGTAGTCCGCAGAGGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: NLLPFGIIPLLECHR*RLKRGQDNVVRRGQ Trigger: CTGGCCTCTGCGGACTACATTGTCTTGGCCTCTTTTGAGCCTCCACCTGTGACATTCCAACAGTGGAATGATGCCAAATGGCAAGAGATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000030858.14 ENSMUST00000056965.12 ENSMUST00000105706.8 ENSMUST00000126615.8 ENSMUST00000134261.2 ENSMUST00000152098.8 ENSMUST00000168503.8 |
||
| CDS-3UTR CAA 90 bp | TGGGCTTGCCCAAGGTTGTATAGGGCAAGTGCTCATGGGACTGGGAGCCTGACTAAATACTTCTTGACCTaGTTGTCAGGAAAGCTTGTG | + |
|
Preference number: 5 (lower is better) Translates to: WACPRLYRASAHGTGSLTKYFLT*LSGKLV Trigger: CACAAGCTTTCCTGACAACAAGGTCAAGAAGTATTT...AGTCAGGCTCCCAGTCCCATGAGCACTTGCCCTATACAACCTTGGGCAAGCCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030858.14 ENSMUST00000056965.12 ENSMUST00000105706.8 ENSMUST00000168503.8 |
||
| CDS-3UTR CAA 90 bp | GAAGGGGCTCTTTCTCAGAGTGCCAGCAACCCACCTGTAAGCCCTCAAACCAGGAAATACTTCTTGACCTaGTTGTCAGGAAAGCTTGTG | + |
|
Preference number: 5 (lower is better) Translates to: EGALSQSASNPPVSPQTRKYFLT*LSGKLV Trigger: CACAAGCTTTCCTGACAACAAGGTCAAGAAGTATTT...CCTGGTTTGAGGGCTTACAGGTGGGTTGCTGGCACTCTGAGAAAGAGCCCCTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105706.8 ENSMUST00000168503.8 |
||
| CDS-3UTR CAA 90 bp | TGGGCTTGCCCAAGGTTGTATAGGGCAAGTGCTCATGGGACTGGGAGCCTGACTGTGACAAAATACTTCTaGACCTTGTTGTCAGGAAAG | + |
|
Preference number: 5 (lower is better) Translates to: WACPRLYRASAHGTGSLTVTKYF*TLLSGK Trigger: CTTTCCTGACAACAAGGTCAAGAAGTATTTTGTCAC...AGTCAGGCTCCCAGTCCCATGAGCACTTGCCCTATACAACCTTGGGCAAGCCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030858.14 ENSMUST00000056965.12 ENSMUST00000105706.8 ENSMUST00000168503.8 |
||
| CDS-3UTR CAA 90 bp | GAAGGGGCTCTTTCTCAGAGTGCCAGCAACCCACCTGTAAGCCCTCAAACCAGGGTGACAAAATACTTCTaGACCTTGTTGTCAGGAAAG | + |
|
Preference number: 5 (lower is better) Translates to: EGALSQSASNPPVSPQTRVTKYF*TLLSGK Trigger: CTTTCCTGACAACAAGGTCAAGAAGTATTTTGTCAC...CCTGGTTTGAGGGCTTACAGGTGGGTTGCTGGCACTCTGAGAAAGAGCCCCTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000105706.8 ENSMUST00000168503.8 |
||
| CDS CCA 90 bp | CACCTGGAGGGTAATCAGAGAAGGTGTGGGAAATCTCTTGCCATTTaGCATCATTCCACTGTTGGAATGTCACAGGTGGAGGCTCAAAAG | + |
|
Preference number: 5 (lower is better) Translates to: HLEGNQRRCGKSLAI*HHSTVGMSQVEAQK Trigger: CTTTTGAGCCTCCACCTGTGACATTCCAACAGTGGAATGATGCCAAATGGCAAGAGATTTCCCACACCTTCTCTGATTACCCTCCAGGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000030858.14 ENSMUST00000056965.12 ENSMUST00000105706.8 ENSMUST00000126615.8 ENSMUST00000134261.2 ENSMUST00000152098.8 ENSMUST00000168503.8 |
||
| CDS-3UTR CAA 90 bp | AACATTTATTACAACAAAATGTCAGAGCTGTGGGTGCCAACTATCACTACTGAGCAGCGATCCCCTCCGTaGGAGTCTATCCGCCATGAG | + |
|
Preference number: 5 (lower is better) Translates to: NIYYNKMSELWVPTITTEQRSPP*ESIRHE Trigger: CTCATGGCGGATAGACTCCAACGGAGGGGATCGCTG...CTCAGTAGTGATAGTTGGCACCCACAGCTCTGACATTTTGTTGTAATAAATGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000030858.14 ENSMUST00000056965.12 ENSMUST00000105706.8 ENSMUST00000168503.8 |
||
| CDS-3UTR CAA 90 bp | ATTTATTACAACAAAATGTCAGAGCTGTGGGTGCCAACTATCACTACTGAGTTGGCAGGGGGAGGGTTCTaGGCTGTCCTGTGGCTGATA | + |
|
Preference number: 5 (lower is better) Translates to: IYYNKMSELWVPTITTELAGGGF*AVLWLI Trigger: TATCAGCCACAGGACAGCCAAGAACCCTCCCCCTGC...CAACTCAGTAGTGATAGTTGGCACCCACAGCTCTGACATTTTGTTGTAATAAAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000030858.14 ENSMUST00000056965.12 ENSMUST00000105706.8 ENSMUST00000168503.8 |
||
| CDS-3UTR CAA 90 bp | GGGTTACTGAAAACATTTATTACAACAAAATGTCAGAGCTGTGGGTGCCAACTAGCAGGGGGAGGGTTCTaGGCTGTCCTGTGGCTGATA | + |
|
Preference number: 5 (lower is better) Translates to: GLLKTFITTKCQSCGCQLAGGGF*AVLWLI Trigger: TATCAGCCACAGGACAGCCAAGAACCCTCCCCCTGC...TAGTTGGCACCCACAGCTCTGACATTTTGTTGTAATAAATGTTTTCAGTAACCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000030858.14 ENSMUST00000056965.12 ENSMUST00000105706.8 ENSMUST00000168503.8 |
||
| CDS-3UTR CAA 90 bp | AACATTTATTACAACAAAATGTCAGAGCTGTGGGTGCCAACTATCACTACTGAGCAGCTGTACCCGGAGTaGATAGGTGCAGCCACAGTC | + |
|
Preference number: 5 (lower is better) Translates to: NIYYNKMSELWVPTITTEQLYPE*IGAATV Trigger: GACTGTGGCTGCACCTATCAACTCCGGGTACAGCTG...CTCAGTAGTGATAGTTGGCACCCACAGCTCTGACATTTTGTTGTAATAAATGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030858.14 ENSMUST00000056965.12 ENSMUST00000105706.8 ENSMUST00000168503.8 |
||
| CDS-3UTR CAA 90 bp | GGGTTACTGAAAACATTTATTACAACAAAATGTCAGAGCTGTGGGTGCCAACTACAGCTGTACCCGGAGTaGATAGGTGCAGCCACAGTC | + |
|
Preference number: 5 (lower is better) Translates to: GLLKTFITTKCQSCGCQLQLYPE*IGAATV Trigger: GACTGTGGCTGCACCTATCAACTCCGGGTACAGCTG...TAGTTGGCACCCACAGCTCTGACATTTTGTTGTAATAAATGTTTTCAGTAACCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000030858.14 ENSMUST00000056965.12 ENSMUST00000105706.8 ENSMUST00000168503.8 |
||
| CDS-3UTR CAA 90 bp | CAGCAACCCACCTGTAAGCCCTCAAACCAGGCTGGGTTACTGAAAACATTTATTGGTGTGGGAAATCTCTaGCCATTTGGCATCATTCCA | + |
|
Preference number: 5 (lower is better) Translates to: QQPTCKPSNQAGLLKTFIGVGNL*PFGIIP Trigger: TGGAATGATGCCAAATGGCAAGAGATTTCCCACACC...AATAAATGTTTTCAGTAACCCAGCCTGGTTTGAGGGCTTACAGGTGGGTTGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105706.8 ENSMUST00000168503.8 |
||
| CDS-3UTR CAA 90 bp | TTACTGAAAACATTTATTACAACAAAATGTCAGAGCTGTGGGTGCCAACTATCACAGCGATCCCCTCCGTaGGAGTCTATCCGCCATGAG | + |
|
Preference number: 5 (lower is better) Translates to: LLKTFITTKCQSCGCQLSQRSPP*ESIRHE Trigger: CTCATGGCGGATAGACTCCAACGGAGGGGATCGCTG...TGATAGTTGGCACCCACAGCTCTGACATTTTGTTGTAATAAATGTTTTCAGTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000030858.14 ENSMUST00000056965.12 ENSMUST00000105706.8 ENSMUST00000168503.8 |
||
| CDS-3UTR CAA 90 bp | GTTACTGAAAACATTTATTACAACAAAATGTCAGAGCTGTGGGTGCCAACTATCCAGCTGTACCCGGAGTaGATAGGTGCAGCCACAGTC | + |
|
Preference number: 5 (lower is better) Translates to: VTENIYYNKMSELWVPTIQLYPE*IGAATV Trigger: GACTGTGGCTGCACCTATCAACTCCGGGTACAGCTG...GATAGTTGGCACCCACAGCTCTGACATTTTGTTGTAATAAATGTTTTCAGTAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000030858.14 ENSMUST00000056965.12 ENSMUST00000105706.8 ENSMUST00000168503.8 |
||
| CDS-3UTR CAA 90 bp | ACATTTATTACAACAAAATGTCAGAGCTGTGGGTGCCAACTATCACTACTGAGTATAATGATGCTGCTGTaGGTGACACGGGGGCCGTAC | + |
|
Preference number: 5 (lower is better) Translates to: TFITTKCQSCGCQLSLLSIMMLL*VTRGPY Trigger: GTACGGCCCCCGTGTCACCAACAGCAGCATCATTAT...ACTCAGTAGTGATAGTTGGCACCCACAGCTCTGACATTTTGTTGTAATAAATGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000030858.14 ENSMUST00000056965.12 ENSMUST00000105706.8 ENSMUST00000168503.8 |
||
| CDS-3UTR CAA 90 bp | TTACTGAAAACATTTATTACAACAAAATGTCAGAGCTGTGGGTGCCAACTATCAGCAGGGGGAGGGTTCTaGGCTGTCCTGTGGCTGATA | + |
|
Preference number: 5 (lower is better) Translates to: LLKTFITTKCQSCGCQLSAGGGF*AVLWLI Trigger: TATCAGCCACAGGACAGCCAAGAACCCTCCCCCTGC...TGATAGTTGGCACCCACAGCTCTGACATTTTGTTGTAATAAATGTTTTCAGTAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000030858.14 ENSMUST00000056965.12 ENSMUST00000105706.8 ENSMUST00000168503.8 |
||
| CDS-3UTR CAA 90 bp | GTTACTGAAAACATTTATTACAACAAAATGTCAGAGCTGTGGGTGCCAACTATCTGTTGTCAGGAAAGCTaGTGCCACAGCTCCCAGGGA | + |
|
Preference number: 5 (lower is better) Translates to: VTENIYYNKMSELWVPTICCQES*CHSSQG Trigger: TCCCTGGGAGCTGTGGCACAAGCTTTCCTGACAACA...GATAGTTGGCACCCACAGCTCTGACATTTTGTTGTAATAAATGTTTTCAGTAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000030858.14 ENSMUST00000056965.12 ENSMUST00000105706.8 ENSMUST00000168503.8 |
||
| CDS-3UTR CAA 90 bp | GGGTTACTGAAAACATTTATTACAACAAAATGTCAGAGCTGTGGGTGCCAACTAGGCATCATTCCACTGTaGGAATGTCACAGGTGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: GLLKTFITTKCQSCGCQLGIIPL*ECHRWR Trigger: CCTCCACCTGTGACATTCCAACAGTGGAATGATGCC...TAGTTGGCACCCACAGCTCTGACATTTTGTTGTAATAAATGTTTTCAGTAACCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000030858.14 ENSMUST00000056965.12 ENSMUST00000105706.8 ENSMUST00000168503.8 |
||
| CDS-3UTR CAA 90 bp | AACATTTATTACAACAAAATGTCAGAGCTGTGGGTGCCAACTATCACTACTGAGGGCATCATTCCACTGTaGGAATGTCACAGGTGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: NIYYNKMSELWVPTITTEGIIPL*ECHRWR Trigger: CCTCCACCTGTGACATTCCAACAGTGGAATGATGCC...CTCAGTAGTGATAGTTGGCACCCACAGCTCTGACATTTTGTTGTAATAAATGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030858.14 ENSMUST00000056965.12 ENSMUST00000105706.8 ENSMUST00000168503.8 |
||
| CDS-3UTR CAA 90 bp | TTACTGAAAACATTTATTACAACAAAATGTCAGAGCTGTGGGTGCCAACTATCAATAATGATGCTGCTGTaGGTGACACGGGGGCCGTAC | + |
|
Preference number: 5 (lower is better) Translates to: LLKTFITTKCQSCGCQLSIMMLL*VTRGPY Trigger: GTACGGCCCCCGTGTCACCAACAGCAGCATCATTAT...TGATAGTTGGCACCCACAGCTCTGACATTTTGTTGTAATAAATGTTTTCAGTAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000030858.14 ENSMUST00000056965.12 ENSMUST00000105706.8 ENSMUST00000168503.8 |
||
| CDS-3UTR CAA 90 bp | TATTACAACAAAATGTCAGAGCTGTGGGTGCCAACTATCACTACTGAGTTGATGGAAATCTCTTGCCATTaGGCATCATTCCACTGTTGG | + |
|
Preference number: 5 (lower is better) Translates to: YYNKMSELWVPTITTELMEISCH*ASFHCW Trigger: CCAACAGTGGAATGATGCCAAATGGCAAGAGATTTC...CATCAACTCAGTAGTGATAGTTGGCACCCACAGCTCTGACATTTTGTTGTAATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030858.14 ENSMUST00000056965.12 ENSMUST00000105706.8 ENSMUST00000168503.8 |
||
| CDS-3UTR CAA 90 bp | AACATTTATTACAACAAAATGTCAGAGCTGTGGGTGCCAACTATCACTACTGAGGGTGTGGGAAATCTCTaGCCATTTGGCATCATTCCA | + |
|
Preference number: 5 (lower is better) Translates to: NIYYNKMSELWVPTITTEGVGNL*PFGIIP Trigger: TGGAATGATGCCAAATGGCAAGAGATTTCCCACACC...CTCAGTAGTGATAGTTGGCACCCACAGCTCTGACATTTTGTTGTAATAAATGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030858.14 ENSMUST00000056965.12 ENSMUST00000105706.8 ENSMUST00000168503.8 |
||
| CDS-3UTR CAA 90 bp | AACATTTATTACAACAAAATGTCAGAGCTGTGGGTGCCAACTATCACTACTGAGGAAATCTCTTGCCATTaGGCATCATTCCACTGTTGG | + |
|
Preference number: 5 (lower is better) Translates to: NIYYNKMSELWVPTITTEEISCH*ASFHCW Trigger: CCAACAGTGGAATGATGCCAAATGGCAAGAGATTTC...CTCAGTAGTGATAGTTGGCACCCACAGCTCTGACATTTTGTTGTAATAAATGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030858.14 ENSMUST00000056965.12 ENSMUST00000105706.8 ENSMUST00000168503.8 |
||
| CDS-3UTR CAA 90 bp | GTTACTGAAAACATTTATTACAACAAAATGTCAGAGCTGTGGGTGCCAACTATCGGTGTGGGAAATCTCTaGCCATTTGGCATCATTCCA | + |
|
Preference number: 5 (lower is better) Translates to: VTENIYYNKMSELWVPTIGVGNL*PFGIIP Trigger: TGGAATGATGCCAAATGGCAAGAGATTTCCCACACC...GATAGTTGGCACCCACAGCTCTGACATTTTGTTGTAATAAATGTTTTCAGTAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000030858.14 ENSMUST00000056965.12 ENSMUST00000105706.8 ENSMUST00000168503.8 |
||
| CDS-3UTR CAA 90 bp | ACATTTATTACAACAAAATGTCAGAGCTGTGGGTGCCAACTATCACTACTGAGTAAATACTTCTTGACCTaGTTGTCAGGAAAGCTTGTG | + |
|
Preference number: 5 (lower is better) Translates to: TFITTKCQSCGCQLSLLSKYFLT*LSGKLV Trigger: CACAAGCTTTCCTGACAACAAGGTCAAGAAGTATTT...ACTCAGTAGTGATAGTTGGCACCCACAGCTCTGACATTTTGTTGTAATAAATGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030858.14 ENSMUST00000056965.12 ENSMUST00000105706.8 ENSMUST00000168503.8 |
||
| CDS-3UTR CAA 90 bp | ATTTATTACAACAAAATGTCAGAGCTGTGGGTGCCAACTATCACTACTGAGTTGGTGACAAAATACTTCTaGACCTTGTTGTCAGGAAAG | + |
|
Preference number: 5 (lower is better) Translates to: IYYNKMSELWVPTITTELVTKYF*TLLSGK Trigger: CTTTCCTGACAACAAGGTCAAGAAGTATTTTGTCAC...CAACTCAGTAGTGATAGTTGGCACCCACAGCTCTGACATTTTGTTGTAATAAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000030858.14 ENSMUST00000056965.12 ENSMUST00000105706.8 ENSMUST00000168503.8 |
||
| CDS-3UTR CAA 90 bp | GTTACTGAAAACATTTATTACAACAAAATGTCAGAGCTGTGGGTGCCAACTATCAAATACTTCTTGACCTaGTTGTCAGGAAAGCTTGTG | + |
|
Preference number: 5 (lower is better) Translates to: VTENIYYNKMSELWVPTIKYFLT*LSGKLV Trigger: CACAAGCTTTCCTGACAACAAGGTCAAGAAGTATTT...GATAGTTGGCACCCACAGCTCTGACATTTTGTTGTAATAAATGTTTTCAGTAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000030858.14 ENSMUST00000056965.12 ENSMUST00000105706.8 ENSMUST00000168503.8 |
||
| CDS CAA 90 bp | CCACAGCTCCCAGGGAGCGTCTCCACCTTCCAGCGATCCCCTCCGTaGGAGTCTATCCGCCATGAGCTCAGGTTCTCTTCAGCACACGGG | + |
|
Preference number: 6 (lower is better) Translates to: PQLPGSVSTFQRSPP*ESIRHELRFSSAHG Trigger: CCCGTGTGCTGAAGAGAACCTGAGCTCATGGCGGATAGACTCCAACGGAGGGGATCGCTGGAAGGTGGAGACGCTCCCTGGGAGCTGTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000030858.14 ENSMUST00000056965.12 ENSMUST00000105706.8 ENSMUST00000126615.8 ENSMUST00000134261.2 ENSMUST00000152098.8 ENSMUST00000168503.8 |
||
| CDS TCA 72 bp | GGCAGTTGCGCAGCAGCTGTGGGGCCGGGATATGGATaGACAGCTCCAGGAGAATGTTCTCTGGCAGCTCGT | + |
|
Preference number: 6 (lower is better) Translates to: GSCAAAVGPGYG*TAPGECSLAAR Trigger: ACGAGCTGCCAGAGAACATTCTCCTGGAGCTGTTCATCCATATCCCGGCCCCACAGCTGCTGCGCAACTGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000030858.14 ENSMUST00000056965.12 ENSMUST00000105706.8 ENSMUST00000126615.8 ENSMUST00000132083.2 ENSMUST00000134261.2 ENSMUST00000152098.8 ENSMUST00000168503.8 |
||
| CDS CCA 72 bp | CAGGGAGCGTCTCCACCTTCCAGCGATCCCCTCCGTTaGAGTCTATCCGCCATGAGCTCAGGTTCTCTTCAG | + |
|
Preference number: 6 (lower is better) Translates to: QGASPPSSDPLR*SLSAMSSGSLQ Trigger: CTGAAGAGAACCTGAGCTCATGGCGGATAGACTCCAACGGAGGGGATCGCTGGAAGGTGGAGACGCTCCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000030858.14 ENSMUST00000056965.12 ENSMUST00000105706.8 ENSMUST00000126615.8 ENSMUST00000134261.2 ENSMUST00000152098.8 ENSMUST00000168503.8 |
||
| CDS CAA 72 bp | CCAGGGAGCGTCTCCACCTTCCAGCGATCCCCTCCGTaGGAGTCTATCCGCCATGAGCTCAGGTTCTCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: PGSVSTFQRSPP*ESIRHELRFSS Trigger: TGAAGAGAACCTGAGCTCATGGCGGATAGACTCCAACGGAGGGGATCGCTGGAAGGTGGAGACGCTCCCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000030858.14 ENSMUST00000056965.12 ENSMUST00000105706.8 ENSMUST00000126615.8 ENSMUST00000134261.2 ENSMUST00000152098.8 ENSMUST00000168503.8 |
||
| CDS CAA 72 bp | GACAATGTAGTCCGCAGAGGCCAGCTGTACCCGGAGTaGATAGGTGCAGCCACAGTCTGCTCTGGGGGCAAC | + |
|
Preference number: 6 (lower is better) Translates to: DNVVRRGQLYPE*IGAATVCSGGN Trigger: GTTGCCCCCAGAGCAGACTGTGGCTGCACCTATCAACTCCGGGTACAGCTGGCCTCTGCGGACTACATTGTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENSMUST00000030858.14 ENSMUST00000056965.12 ENSMUST00000105706.8 ENSMUST00000126615.8 ENSMUST00000134261.2 ENSMUST00000152098.8 ENSMUST00000168503.8 |
||
| CDS CAA 90 bp | AGAGGCCAAGACAATGTAGTCCGCAGAGGCCAGCTGTACCCGGAGTaGATAGGTGCAGCCACAGTCTGCTCTGGGGGCAACCCAGTCCTT | + |
|
Preference number: 6 (lower is better) Translates to: RGQDNVVRRGQLYPE*IGAATVCSGGNPVL Trigger: AAGGACTGGGTTGCCCCCAGAGCAGACTGTGGCTGCACCTATCAACTCCGGGTACAGCTGGCCTCTGCGGACTACATTGTCTTGGCCTCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENSMUST00000030858.14 ENSMUST00000056965.12 ENSMUST00000105706.8 ENSMUST00000126615.8 ENSMUST00000134261.2 ENSMUST00000152098.8 ENSMUST00000168503.8 |
||
| CDS TCA 72 bp | CTTCCAGCGATCCCCTCCGTTGGAGTCTATCCGCCATaGGCTCAGGTTCTCTTCAGCACACGGGTTCCGAAG | + |
|
Preference number: 6 (lower is better) Translates to: LPAIPSVGVYPP*AQVLFSTRVPK Trigger: CTTCGGAACCCGTGTGCTGAAGAGAACCTGAGCTCATGGCGGATAGACTCCAACGGAGGGGATCGCTGGAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000030858.14 ENSMUST00000056965.12 ENSMUST00000105706.8 ENSMUST00000126615.8 ENSMUST00000134261.2 ENSMUST00000152098.8 ENSMUST00000168503.8 |
||
| CDS CAA 72 bp | GTTTCTTCCGGTAGAGTTCTGGCAGGGGGAGGGTTCTaGGCTGTCCTGTGGCTGATAATGATGCTGCTGTTG | + |
|
Preference number: 6 (lower is better) Translates to: VSSGRVLAGGGF*AVLWLIMMLLL Trigger: CAACAGCAGCATCATTATCAGCCACAGGACAGCCAAGAACCCTCCCCCTGCCAGAACTCTACCGGAAGAAAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000030858.14 ENSMUST00000056965.12 ENSMUST00000105706.8 ENSMUST00000168503.8 |
||
| CDS CCA 72 bp | CTGGCCCCCGTGTTGAAAAAGGATGTGACGGACACCTaGAGGGTAATCAGAGAAGGTGTGGGAAATCTCTTG | + |
|
Preference number: 6 (lower is better) Translates to: LAPVLKKDVTDT*RVIREGVGNLL Trigger: CAAGAGATTTCCCACACCTTCTCTGATTACCCTCCAGGTGTCCGTCACATCCTTTTTCAACACGGGGGCCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 7 transcripts: ENSMUST00000030858.14 ENSMUST00000056965.12 ENSMUST00000105706.8 ENSMUST00000126615.8 ENSMUST00000134261.2 ENSMUST00000152098.8 ENSMUST00000168503.8 |
||
| CDS CAA 90 bp | ATTACTACAGTTTCTTCCGGTAGAGTTCTGGCAGGGGGAGGGTTCTaGGCTGTCCTGTGGCTGATAATGATGCTGCTGTTGGTGACACGG | + |
|
Preference number: 6 (lower is better) Translates to: ITTVSSGRVLAGGGF*AVLWLIMMLLLVTR Trigger: CCGTGTCACCAACAGCAGCATCATTATCAGCCACAGGACAGCCAAGAACCCTCCCCCTGCCAGAACTCTACCGGAAGAAACTGTAGTAAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000030858.14 ENSMUST00000056965.12 ENSMUST00000105706.8 ENSMUST00000168503.8 |
||
| CDS CAA 90 bp | TTGAGGCACATCTCAAAAGAGGTGACAAAATACTTCTTGACCTTGTaGTCAGGAAAGCTTGTGCCACAGCTCCCAGGGAGCGTCTCCACC | + |
|
Preference number: 6 (lower is better) Translates to: LRHISKEVTKYFLTL*SGKLVPQLPGSVST Trigger: GGTGGAGACGCTCCCTGGGAGCTGTGGCACAAGCTTTCCTGACAACAAGGTCAAGAAGTATTTTGTCACCTCTTTTGAGATGTGCCTCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000030858.14 ENSMUST00000056965.12 ENSMUST00000105706.8 ENSMUST00000126615.8 ENSMUST00000134261.2 ENSMUST00000152098.8 ENSMUST00000168503.8 |
||
| CDS CCA 72 bp | CCATTTGGCATCATTCCACTGTTGGAATGTCACAGGTaGAGGCTCAAAAGAGGCCAAGACAATGTAGTCCGC | + |
|
Preference number: 6 (lower is better) Translates to: PFGIIPLLECHR*RLKRGQDNVVR Trigger: GCGGACTACATTGTCTTGGCCTCTTTTGAGCCTCCACCTGTGACATTCCAACAGTGGAATGATGCCAAATGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000030858.14 ENSMUST00000056965.12 ENSMUST00000105706.8 ENSMUST00000126615.8 ENSMUST00000134261.2 ENSMUST00000152098.8 ENSMUST00000168503.8 |
||
| CDS CAA 90 bp | GATTTGAGGCACATCTCAAAAGAGGTGACAAAATACTTCTTGACCTaGTTGTCAGGAAAGCTTGTGCCACAGCTCCCAGGGAGCGTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: DLRHISKEVTKYFLT*LSGKLVPQLPGSVS Trigger: GGAGACGCTCCCTGGGAGCTGTGGCACAAGCTTTCCTGACAACAAGGTCAAGAAGTATTTTGTCACCTCTTTTGAGATGTGCCTCAAATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000030858.14 ENSMUST00000056965.12 ENSMUST00000105706.8 ENSMUST00000126615.8 ENSMUST00000134261.2 ENSMUST00000152098.8 ENSMUST00000168503.8 |
||
| CDS CCA 72 bp | TGGGAAATCTCTTGCCATTTGGCATCATTCCACTGTTaGAATGTCACAGGTGGAGGCTCAAAAGAGGCCAAG | + |
|
Preference number: 6 (lower is better) Translates to: WEISCHLASFHC*NVTGGGSKEAK Trigger: CTTGGCCTCTTTTGAGCCTCCACCTGTGACATTCCAACAGTGGAATGATGCCAAATGGCAAGAGATTTCCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000030858.14 ENSMUST00000056965.12 ENSMUST00000105706.8 ENSMUST00000126615.8 ENSMUST00000134261.2 ENSMUST00000152098.8 ENSMUST00000168503.8 |
||
| CDS CAA 72 bp | GTGGGAAATCTCTTGCCATTTGGCATCATTCCACTGTaGGAATGTCACAGGTGGAGGCTCAAAAGAGGCCAA | + |
|
Preference number: 6 (lower is better) Translates to: VGNLLPFGIIPL*ECHRWRLKRGQ Trigger: TTGGCCTCTTTTGAGCCTCCACCTGTGACATTCCAACAGTGGAATGATGCCAAATGGCAAGAGATTTCCCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000030858.14 ENSMUST00000056965.12 ENSMUST00000105706.8 ENSMUST00000126615.8 ENSMUST00000134261.2 ENSMUST00000152098.8 ENSMUST00000168503.8 |
||
| CDS CAA 90 bp | ATCTGGGATTTGAGGCACATCTCAAAAGAGGTGACAAAATACTTCTaGACCTTGTTGTCAGGAAAGCTTGTGCCACAGCTCCCAGGGAGC | + |
|
Preference number: 6 (lower is better) Translates to: IWDLRHISKEVTKYF*TLLSGKLVPQLPGS Trigger: GCTCCCTGGGAGCTGTGGCACAAGCTTTCCTGACAACAAGGTCAAGAAGTATTTTGTCACCTCTTTTGAGATGTGCCTCAAATCCCAGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000030858.14 ENSMUST00000056965.12 ENSMUST00000105706.8 ENSMUST00000126615.8 ENSMUST00000134261.2 ENSMUST00000152098.8 ENSMUST00000168503.8 |
||
| CDS CAA 90 bp | AGAGAAGGTGTGGGAAATCTCTTGCCATTTGGCATCATTCCACTGTaGGAATGTCACAGGTGGAGGCTCAAAAGAGGCCAAGACAATGTA | + |
|
Preference number: 6 (lower is better) Translates to: REGVGNLLPFGIIPL*ECHRWRLKRGQDNV Trigger: TACATTGTCTTGGCCTCTTTTGAGCCTCCACCTGTGACATTCCAACAGTGGAATGATGCCAAATGGCAAGAGATTTCCCACACCTTCTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000030858.14 ENSMUST00000056965.12 ENSMUST00000105706.8 ENSMUST00000126615.8 ENSMUST00000134261.2 ENSMUST00000152098.8 ENSMUST00000168503.8 |
||
| CDS CCA 72 bp | GGTAATCAGAGAAGGTGTGGGAAATCTCTTGCCATTTaGCATCATTCCACTGTTGGAATGTCACAGGTGGAG | + |
|
Preference number: 6 (lower is better) Translates to: GNQRRCGKSLAI*HHSTVGMSQVE Trigger: CTCCACCTGTGACATTCCAACAGTGGAATGATGCCAAATGGCAAGAGATTTCCCACACCTTCTCTGATTACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000030858.14 ENSMUST00000056965.12 ENSMUST00000105706.8 ENSMUST00000126615.8 ENSMUST00000134261.2 ENSMUST00000152098.8 ENSMUST00000168503.8 |
||
| CDS CAA 72 bp | ATCTCAAAAGAGGTGACAAAATACTTCTTGACCTTGTaGTCAGGAAAGCTTGTGCCACAGCTCCCAGGGAGC | + |
|
Preference number: 6 (lower is better) Translates to: ISKEVTKYFLTL*SGKLVPQLPGS Trigger: GCTCCCTGGGAGCTGTGGCACAAGCTTTCCTGACAACAAGGTCAAGAAGTATTTTGTCACCTCTTTTGAGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000030858.14 ENSMUST00000056965.12 ENSMUST00000105706.8 ENSMUST00000126615.8 ENSMUST00000134261.2 ENSMUST00000152098.8 ENSMUST00000168503.8 |
||
| CDS CAA 72 bp | CACATCTCAAAAGAGGTGACAAAATACTTCTTGACCTaGTTGTCAGGAAAGCTTGTGCCACAGCTCCCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: HISKEVTKYFLT*LSGKLVPQLPG Trigger: CCCTGGGAGCTGTGGCACAAGCTTTCCTGACAACAAGGTCAAGAAGTATTTTGTCACCTCTTTTGAGATGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000030858.14 ENSMUST00000056965.12 ENSMUST00000105706.8 ENSMUST00000126615.8 ENSMUST00000134261.2 ENSMUST00000152098.8 ENSMUST00000168503.8 |
||
| CDS CAA 72 bp | TTGAGGCACATCTCAAAAGAGGTGACAAAATACTTCTaGACCTTGTTGTCAGGAAAGCTTGTGCCACAGCTC | + |
|
Preference number: 6 (lower is better) Translates to: LRHISKEVTKYF*TLLSGKLVPQL Trigger: GAGCTGTGGCACAAGCTTTCCTGACAACAAGGTCAAGAAGTATTTTGTCACCTCTTTTGAGATGTGCCTCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000030858.14 ENSMUST00000056965.12 ENSMUST00000105706.8 ENSMUST00000126615.8 ENSMUST00000134261.2 ENSMUST00000152098.8 ENSMUST00000168503.8 |
||