Pregenerated sensors for FBXO47 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000070336Ensembl transcript IDs: ENSMUST00000093939.4
Found 64 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | GGTGAGCCAGCTGCCGACTCTTGGATAGTTAACACTCTGATTTGGTTTGATGTTACATTTACCAAGACCTaGAGAGCCAGAACTTGTTTT | + |
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Preference number: 2 (lower is better) Translates to: GEPAADSWIVNTLIWFDVTFTKT*RARTCF Trigger: AAAACAAGTTCTGGCTCTTCAGGTCTTGGTAAATGT...AACATCAAACCAAATCAGAGTGTTAACTATCCAAGAGTCGGCAGCTGGCTCACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093939.4 |
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| 3UTR-3UTR GCA 90 bp | GGTGAGCCAGCTGCCGACTCTTGGATAGTTAACACTCTGATTTGGTTTGATGTTATTCTTGGGTCTGCCTaGTATTTTGTAATAATCAGA | + |
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Preference number: 2 (lower is better) Translates to: GEPAADSWIVNTLIWFDVILGSA*YFVIIR Trigger: TCTGATTATTACAAAATAGCAGGCAGACCCAAGAAT...AACATCAAACCAAATCAGAGTGTTAACTATCCAAGAGTCGGCAGCTGGCTCACC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093939.4 |
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| 3UTR-3UTR GCA 90 bp | GGTGAGCCAGCTGCCGACTCTTGGATAGTTAACACTCTGATTTGGTTTGATGTTGTTTTCCAGAAAAGTTaGAATATATTCTTGGGTCTG | + |
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Preference number: 2 (lower is better) Translates to: GEPAADSWIVNTLIWFDVVFQKS*NIFLGL Trigger: CAGACCCAAGAATATATTGCAACTTTTCTGGAAAAC...AACATCAAACCAAATCAGAGTGTTAACTATCCAAGAGTCGGCAGCTGGCTCACC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093939.4 |
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| 3UTR-3UTR CCA 90 bp | TCTAAAAGTCAGTATTACAAATCCTTAGAGAACATGTGGGCTGTATCTGCTCAAGTTGCAATATATTCTTaGGTCTGCCTGCTATTTTGT | + |
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Preference number: 2 (lower is better) Translates to: SKSQYYKSLENMWAVSAQVAIYS*VCLLFC Trigger: ACAAAATAGCAGGCAGACCCAAGAATATATTGCAAC...TTGAGCAGATACAGCCCACATGTTCTCTAAGGATTTGTAATACTGACTTTTAGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093939.4 |
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| 3UTR-3UTR CAA 90 bp | TATTACAAATCCTTAGAGAACATGTGGGCTGTATCTGCTCAAAGTAAGCAAAGCCTGAAGAGCCAGAACTaGTTTTCCAGAAAAGTTGCA | + |
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Preference number: 3 (lower is better) Translates to: YYKSLENMWAVSAQSKQSLKSQN*FSRKVA Trigger: TGCAACTTTTCTGGAAAACAAGTTCTGGCTCTTCAG...GCTTTGCTTACTTTGAGCAGATACAGCCCACATGTTCTCTAAGGATTTGTAATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093939.4 |
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| 3UTR TCA 72 bp | ACTCTGATTTGGTTTGATGTTACATTTACCAAGACCTaGAGAGCCAGAACTTGTTTTCCAGAAAAGTTGCAA | + |
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Preference number: 3 (lower is better) Translates to: TLIWFDVTFTKT*RARTCFPEKLQ Trigger: TTGCAACTTTTCTGGAAAACAAGTTCTGGCTCTTCAGGTCTTGGTAAATGTAACATCAAACCAAATCAGAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093939.4 |
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| 3UTR CCA 72 bp | TCTAAAAGTCAGTATTACAAATCCTTAGAGAACATGTaGGCTGTATCTGCTCAAAGTAAGCAAAGCAACAGA | + |
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Preference number: 3 (lower is better) Translates to: SKSQYYKSLENM*AVSAQSKQSNR Trigger: TCTGTTGCTTTGCTTACTTTGAGCAGATACAGCCCACATGTTCTCTAAGGATTTGTAATACTGACTTTTAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093939.4 |
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| CDS-3UTR TCA 90 bp | CTATCCTTAGATGTGAAAAGGCATCACTCCCCTGAATGCCAGTCCAGAGGGACATATAGCAATCTTGCCTaGTTCACCATTGGCCATGGC | + |
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Preference number: 4 (lower is better) Translates to: LSLDVKRHHSPECQSRGTYSNLA*FTIGHG Trigger: GCCATGGCCAATGGTGAATCAGGCAAGATTGCTATA...TGTCCCTCTGGACTGGCATTCAGGGGAGTGATGCCTTTTCACATCTAAGGATAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093939.4 |
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| CDS-3UTR TCA 90 bp | CTATCCTTAGATGTGAAAAGGCATCACTCCCCTGAATGCCAGTCCAGAGGGACATCTCTGCTGCAGTGCTaGAGACTTTGCAGACTTTCT | + |
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Preference number: 4 (lower is better) Translates to: LSLDVKRHHSPECQSRGTSLLQC*RLCRLS Trigger: AGAAAGTCTGCAAAGTCTTCAGCACTGCAGCAGAGA...TGTCCCTCTGGACTGGCATTCAGGGGAGTGATGCCTTTTCACATCTAAGGATAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093939.4 |
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| CDS-3UTR CCA 90 bp | GGTGAGCCAGCTGCCGACTCTTGGATAGTTAACACTCTGATTTGGTTTGATGTTTCAGTCTTTCCTTGGTaGGAAGCAGCAAGGTGCATC | + |
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Preference number: 4 (lower is better) Translates to: GEPAADSWIVNTLIWFDVSVFPW*EAARCI Trigger: GATGCACCTTGCTGCTTCCCACCAAGGAAAGACTGA...AACATCAAACCAAATCAGAGTGTTAACTATCCAAGAGTCGGCAGCTGGCTCACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093939.4 |
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| CDS-3UTR TCA 90 bp | GGTGAGCCAGCTGCCGACTCTTGGATAGTTAACACTCTGATTTGGTTTGATGTTCTTCGATGTGTCCAGTaGTCAAGTAGGACATTCCGA | + |
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Preference number: 4 (lower is better) Translates to: GEPAADSWIVNTLIWFDVLRCVQ*SSRTFR Trigger: TCGGAATGTCCTACTTGATCACTGGACACATCGAAG...AACATCAAACCAAATCAGAGTGTTAACTATCCAAGAGTCGGCAGCTGGCTCACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093939.4 |
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| CDS-3UTR GCA 90 bp | GGTGAGCCAGCTGCCGACTCTTGGATAGTTAACACTCTGATTTGGTTTGATGTTGCATTTGCTATGCTCTaGAGGAAGCTCTTCCTCTCT | + |
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Preference number: 4 (lower is better) Translates to: GEPAADSWIVNTLIWFDVAFAML*RKLFLS Trigger: AGAGAGGAAGAGCTTCCTGCAGAGCATAGCAAATGC...AACATCAAACCAAATCAGAGTGTTAACTATCCAAGAGTCGGCAGCTGGCTCACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093939.4 |
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| CDS-3UTR GCA 90 bp | GGTGAGCCAGCTGCCGACTCTTGGATAGTTAACACTCTGATTTGGTTTGATGTTCACTTCCTGGTTTGTTaGAGACAACTGTCTGCATCT | + |
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Preference number: 4 (lower is better) Translates to: GEPAADSWIVNTLIWFDVHFLVC*RQLSAS Trigger: AGATGCAGACAGTTGTCTGCAACAAACCAGGAAGTG...AACATCAAACCAAATCAGAGTGTTAACTATCCAAGAGTCGGCAGCTGGCTCACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093939.4 |
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| CDS-3UTR GCA 90 bp | GGTGAGCCAGCTGCCGACTCTTGGATAGTTAACACTCTGATTTGGTTTGATGTTCAAAAGCATTTGCTATaGTCTGCAGGAAGCTCTTCC | + |
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Preference number: 4 (lower is better) Translates to: GEPAADSWIVNTLIWFDVQKHLL*SAGSSS Trigger: GGAAGAGCTTCCTGCAGAGCATAGCAAATGCTTTTG...AACATCAAACCAAATCAGAGTGTTAACTATCCAAGAGTCGGCAGCTGGCTCACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093939.4 |
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| CDS-3UTR TCA 90 bp | ACTGAATGCGGATCTGCTCTTAAAAAGGCAGAGCTAGCTCTTGCTTCAAAGAGCAGTGTAGATAAGAGTTaGGGATCTGAATCAAGGGTG | + |
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Preference number: 4 (lower is better) Translates to: TECGSALKKAELALASKSSVDKS*GSESRV Trigger: CACCCTTGATTCAGATCCTCAACTCTTATCTACACT...GCTCTTTGAAGCAAGAGCTAGCTCTGCCTTTTTAAGAGCAGATCCGCATTCAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093939.4 |
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| CDS-3UTR TCA 90 bp | GGTGAGCCAGCTGCCGACTCTTGGATAGTTAACACTCTGATTTGGTTTGATGTTGGCAGATCAAGGTCATaGAAGTTCTGTAGTAAAAGT | + |
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Preference number: 4 (lower is better) Translates to: GEPAADSWIVNTLIWFDVGRSRS*KFCSKS Trigger: ACTTTTACTACAGAACTTTCATGACCTTGATCTGCC...AACATCAAACCAAATCAGAGTGTTAACTATCCAAGAGTCGGCAGCTGGCTCACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093939.4 |
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| CDS-3UTR TCA 90 bp | ACTGAATGCGGATCTGCTCTTAAAAAGGCAGAGCTAGCTCTTGCTTCAAAGAGCTCTGAGAGTATCTTGTaGATGTACTTCAGTCTTTCC | + |
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Preference number: 4 (lower is better) Translates to: TECGSALKKAELALASKSSESIL*MYFSLS Trigger: GGAAAGACTGAAGTACATTCACAAGATACTCTCAGA...GCTCTTTGAAGCAAGAGCTAGCTCTGCCTTTTTAAGAGCAGATCCGCATTCAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093939.4 |
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| CDS-3UTR CCA 90 bp | TATTACAAATCCTTAGAGAACATGTGGGCTGTATCTGCTCAAAGTAAGCAAAGCACTTCAGTCTTTCCTTaGTGGGAAGCAGCAAGGTGC | + |
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Preference number: 4 (lower is better) Translates to: YYKSLENMWAVSAQSKQSTSVFP*WEAARC Trigger: GCACCTTGCTGCTTCCCACCAAGGAAAGACTGAAGT...GCTTTGCTTACTTTGAGCAGATACAGCCCACATGTTCTCTAAGGATTTGTAATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093939.4 |
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| CDS-3UTR GCA 90 bp | AGTCAGTATTACAAATCCTTAGAGAACATGTGGGCTGTATCTGCTCAAAGTAAGAAAGACTACAAGTCTTaGCAGTTCAACGGCTCGTCC | + |
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Preference number: 4 (lower is better) Translates to: SQYYKSLENMWAVSAQSKKDYKS*QFNGSS Trigger: GGACGAGCCGTTGAACTGGCAAGACTTGTAGTCTTT...CTTACTTTGAGCAGATACAGCCCACATGTTCTCTAAGGATTTGTAATACTGACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093939.4 |
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| CDS-3UTR CCA 90 bp | ACTGAATGCGGATCTGCTCTTAAAAAGGCAGAGCTAGCTCTTGCTTCAAAGAGCAAGTTATACACACGATaGCATTCAAGTTCATCCCAA | + |
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Preference number: 4 (lower is better) Translates to: TECGSALKKAELALASKSKLYTR*HSSSSQ Trigger: TTGGGATGAACTTGAATGCCATCGTGTGTATAACTT...GCTCTTTGAAGCAAGAGCTAGCTCTGCCTTTTTAAGAGCAGATCCGCATTCAGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093939.4 |
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| CDS-3UTR TCA 90 bp | TCTAAAAGTCAGTATTACAAATCCTTAGAGAACATGTGGGCTGTATCTGCTCAATTATGGAAGTTCGCCTaGGCATGGAGAAGATGGAAC | + |
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Preference number: 4 (lower is better) Translates to: SKSQYYKSLENMWAVSAQLWKFA*AWRRWN Trigger: GTTCCATCTTCTCCATGCTCAGGCGAACTTCCATAA...TTGAGCAGATACAGCCCACATGTTCTCTAAGGATTTGTAATACTGACTTTTAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093939.4 |
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| CDS-3UTR GCA 90 bp | AGTCAGTATTACAAATCCTTAGAGAACATGTGGGCTGTATCTGCTCAAAGTAAGCAGTCTCTTCTTTTGTaGCAGGCAGATCAAGGTCAT | + |
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Preference number: 4 (lower is better) Translates to: SQYYKSLENMWAVSAQSKQSLLL*QADQGH Trigger: ATGACCTTGATCTGCCTGGCACAAAAGAAGAGACTG...CTTACTTTGAGCAGATACAGCCCACATGTTCTCTAAGGATTTGTAATACTGACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093939.4 |
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| CDS-3UTR GCA 90 bp | AGTCAGTATTACAAATCCTTAGAGAACATGTGGGCTGTATCTGCTCAAAGTAAGCCTTCTATCATTTCCTaGCAAATCACCTGCCCATCA | + |
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Preference number: 4 (lower is better) Translates to: SQYYKSLENMWAVSAQSKPSIIS*QITCPS Trigger: TGATGGGCAGGTGATTTGGCAGGAAATGATAGAAGG...CTTACTTTGAGCAGATACAGCCCACATGTTCTCTAAGGATTTGTAATACTGACT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093939.4 |
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| CDS-3UTR GCA 90 bp | TATTACAAATCCTTAGAGAACATGTGGGCTGTATCTGCTCAAAGTAAGCAAAGCACAGGCAAAAGCATTTaGTATGCTCTGCAGGAAGCT | + |
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Preference number: 4 (lower is better) Translates to: YYKSLENMWAVSAQSKQSTGKSI*YALQEA Trigger: AGCTTCCTGCAGAGCATAGCAAATGCTTTTGCCTGT...GCTTTGCTTACTTTGAGCAGATACAGCCCACATGTTCTCTAAGGATTTGTAATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093939.4 |
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| CDS-3UTR GCA 90 bp | AGTCAGTATTACAAATCCTTAGAGAACATGTGGGCTGTATCTGCTCAAAGTAAGACTTTGCAGACTTTCTaGATCATTCTGACTGTCCAG | + |
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Preference number: 4 (lower is better) Translates to: SQYYKSLENMWAVSAQSKTLQTF*IILTVQ Trigger: CTGGACAGTCAGAATGATGCAGAAAGTCTGCAAAGT...CTTACTTTGAGCAGATACAGCCCACATGTTCTCTAAGGATTTGTAATACTGACT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093939.4 |
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| CDS-3UTR TCA 90 bp | AGTCAGTATTACAAATCCTTAGAGAACATGTGGGCTGTATCTGCTCAAAGTAAGACACTGCAAAGGAACTaGACAGCCACTGAATTTAAA | + |
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Preference number: 4 (lower is better) Translates to: SQYYKSLENMWAVSAQSKTLQRN*TATEFK Trigger: TTTAAATTCAGTGGCTGTTCAGTTCCTTTGCAGTGT...CTTACTTTGAGCAGATACAGCCCACATGTTCTCTAAGGATTTGTAATACTGACT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093939.4 |
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| CDS-3UTR GCA 90 bp | TATTACAAATCCTTAGAGAACATGTGGGCTGTATCTGCTCAAAGTAAGCAAAGCCTGAATCAAGGGTGTTaGAAAAATAGCTGGAGTGAT | + |
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Preference number: 4 (lower is better) Translates to: YYKSLENMWAVSAQSKQSLNQGC*KNSWSD Trigger: ATCACTCCAGCTATTTTTGCAACACCCTTGATTCAG...GCTTTGCTTACTTTGAGCAGATACAGCCCACATGTTCTCTAAGGATTTGTAATA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093939.4 |
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| CDS-3UTR GCA 90 bp | TATTACAAATCCTTAGAGAACATGTGGGCTGTATCTGCTCAAAGTAAGCAAAGCGAACGTCTACATTTTTaGTTGGGTATCAAAGTGAAA | + |
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Preference number: 4 (lower is better) Translates to: YYKSLENMWAVSAQSKQSERLHF*LGIKVK Trigger: TTTCACTTTGATACCCAAGCAAAAATGTAGACGTTC...GCTTTGCTTACTTTGAGCAGATACAGCCCACATGTTCTCTAAGGATTTGTAATA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093939.4 |
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| CDS-3UTR GCA 90 bp | AGTCAGTATTACAAATCCTTAGAGAACATGTGGGCTGTATCTGCTCAAAGTAAGACACCATACTTAACATaGCAATATCTTTCACTGACA | + |
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Preference number: 4 (lower is better) Translates to: SQYYKSLENMWAVSAQSKTPYLT*QYLSLT Trigger: TGTCAGTGAAAGATATTGGCATGTTAAGTATGGTGT...CTTACTTTGAGCAGATACAGCCCACATGTTCTCTAAGGATTTGTAATACTGACT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093939.4 |
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| CDS-3UTR GCA 90 bp | TATTACAAATCCTTAGAGAACATGTGGGCTGTATCTGCTCAAAGTAAGCAAAGCAGGTCTGTAAAAACATaGCGTAACATGATAATCCTA | + |
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Preference number: 4 (lower is better) Translates to: YYKSLENMWAVSAQSKQSRSVKT*RNMIIL Trigger: TAGGATTATCATGTTACGGCATGTTTTTACAGACCT...GCTTTGCTTACTTTGAGCAGATACAGCCCACATGTTCTCTAAGGATTTGTAATA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093939.4 |
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| CDS GCA 90 bp | AGGAAGCCTCTGTCATCGTCATCGCGATCTCCCGACATAACAGGCTaGAGCATTTCCATCGTGACACAGGCAAAAGCATTTGCTATGCTC | + |
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Preference number: 5 (lower is better) Translates to: RKPLSSSSRSPDITG*SISIVTQAKAFAML Trigger: GAGCATAGCAAATGCTTTTGCCTGTGTCACGATGGAAATGCTGCAGCCTGTTATGTCGGGAGATCGCGATGACGATGACAGAGGCTTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093939.4 |
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| CDS GCA 90 bp | CATAACAGGCTGCAGCATTTCCATCGTGACACAGGCAAAAGCATTTaGTATGCTCTGCAGGAAGCTCTTCCTCTCTGCTGCAGTGCTGAA | + |
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Preference number: 5 (lower is better) Translates to: HNRLQHFHRDTGKSI*YALQEALPLCCSAE Trigger: TTCAGCACTGCAGCAGAGAGGAAGAGCTTCCTGCAGAGCATAGCAAATGCTTTTGCCTGTGTCACGATGGAAATGCTGCAGCCTGTTATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093939.4 |
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| CDS-3UTR CAA 90 bp | CTATCCTTAGATGTGAAAAGGCATCACTCCCCTGAATGCCAGTCCAGAGGGACACACAGGCAAAAGCATTaGCTATGCTCTGCAGGAAGC | + |
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Preference number: 5 (lower is better) Translates to: LSLDVKRHHSPECQSRGTHRQKH*LCSAGS Trigger: GCTTCCTGCAGAGCATAGCAAATGCTTTTGCCTGTG...TGTCCCTCTGGACTGGCATTCAGGGGAGTGATGCCTTTTCACATCTAAGGATAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000093939.4 |
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| CDS-3UTR CAA 90 bp | GGTGAGCCAGCTGCCGACTCTTGGATAGTTAACACTCTGATTTGGTTTGATGTTCGAGCACTTCCTGGTTaGTTGCAGACAACTGTCTGC | + |
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Preference number: 5 (lower is better) Translates to: GEPAADSWIVNTLIWFDVRALPG*LQTTVC Trigger: GCAGACAGTTGTCTGCAACAAACCAGGAAGTGCTCG...AACATCAAACCAAATCAGAGTGTTAACTATCCAAGAGTCGGCAGCTGGCTCACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093939.4 |
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| CDS-3UTR CAA 90 bp | GGTGAGCCAGCTGCCGACTCTTGGATAGTTAACACTCTGATTTGGTTTGATGTTTACTTCAGTCTTTCCTaGGTGGGAAGCAGCAAGGTG | + |
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Preference number: 5 (lower is better) Translates to: GEPAADSWIVNTLIWFDVYFSLS*VGSSKV Trigger: CACCTTGCTGCTTCCCACCAAGGAAAGACTGAAGTA...AACATCAAACCAAATCAGAGTGTTAACTATCCAAGAGTCGGCAGCTGGCTCACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093939.4 |
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| CDS-3UTR CAA 90 bp | ACTGAATGCGGATCTGCTCTTAAAAAGGCAGAGCTAGCTCTTGCTTCAAAGAGCGCACTTCCTGGTTTGTaGCAGACAACTGTCTGCATC | + |
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Preference number: 5 (lower is better) Translates to: TECGSALKKAELALASKSALPGL*QTTVCI Trigger: GATGCAGACAGTTGTCTGCAACAAACCAGGAAGTGC...GCTCTTTGAAGCAAGAGCTAGCTCTGCCTTTTTAAGAGCAGATCCGCATTCAGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093939.4 |
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| CDS GCA 90 bp | AAGCTCTTCCTCTCTGCTGCAGTGCTGAAGACTTTGCAGACTTTCTaGATCATTCTGACTGTCCAGTCCATGCAGTACAACTCTTTCTCA | + |
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Preference number: 5 (lower is better) Translates to: KLFLSAAVLKTLQTF*IILTVQSMQYNSFS Trigger: TGAGAAAGAGTTGTACTGCATGGACTGGACAGTCAGAATGATGCAGAAAGTCTGCAAAGTCTTCAGCACTGCAGCAGAGAGGAAGAGCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093939.4 |
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| CDS-3UTR CAA 90 bp | ACTGAATGCGGATCTGCTCTTAAAAAGGCAGAGCTAGCTCTTGCTTCAAAGAGCGCAGTGCTGAAGACTTaGCAGACTTTCTGCATCATT | + |
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Preference number: 5 (lower is better) Translates to: TECGSALKKAELALASKSAVLKT*QTFCII Trigger: AATGATGCAGAAAGTCTGCAAAGTCTTCAGCACTGC...GCTCTTTGAAGCAAGAGCTAGCTCTGCCTTTTTAAGAGCAGATCCGCATTCAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093939.4 |
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| CDS GCA 90 bp | GTACAACTCTTTCTCACACACCAAAGCCAAAAAGACTACAAGTCTTaGCAGTTCAACGGCTCGTCCATTTACAGCTTTACTGGCCATGAA | + |
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Preference number: 5 (lower is better) Translates to: VQLFLTHQSQKDYKS*QFNGSSIYSFTGHE Trigger: TTCATGGCCAGTAAAGCTGTAAATGGACGAGCCGTTGAACTGGCAAGACTTGTAGTCTTTTTGGCTTTGGTGTGTGAGAAAGAGTTGTAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093939.4 |
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| CDS TCA 90 bp | TCCAGTAGAGCAGTCTCTTCTTTTGTGCCAGGCAGATCAAGGTCATaGAAGTTCTGTAGTAAAAGTCTCCTACTTCCAGATGATGTTGAG | + |
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Preference number: 5 (lower is better) Translates to: SSRAVSSFVPGRSRS*KFCSKSLLLPDDVE Trigger: CTCAACATCATCTGGAAGTAGGAGACTTTTACTACAGAACTTTCATGACCTTGATCTGCCTGGCACAAAAGAAGAGACTGCTCTACTGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093939.4 |
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| CDS-3UTR CAA 90 bp | ACTGAATGCGGATCTGCTCTTAAAAAGGCAGAGCTAGCTCTTGCTTCAAAGAGCCGTCTACATTTTTGCTaGGGTATCAAAGTGAAACTG | + |
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Preference number: 5 (lower is better) Translates to: TECGSALKKAELALASKSRLHFC*GIKVKL Trigger: CAGTTTCACTTTGATACCCAAGCAAAAATGTAGACG...GCTCTTTGAAGCAAGAGCTAGCTCTGCCTTTTTAAGAGCAGATCCGCATTCAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000093939.4 |
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| CDS GCA 90 bp | AACTCTAGTTTTCGAGCACTTCCTGGTTTGTTGCAGACAACTGTCTaGATCTTTCGGGAGAGATTAGTCAGCTCACATAAGAAGTTATAC | + |
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Preference number: 5 (lower is better) Translates to: NSSFRALPGLLQTTV*IFRERLVSSHKKLY Trigger: GTATAACTTCTTATGTGAGCTGACTAATCTCTCCCGAAAGATGCAGACAGTTGTCTGCAACAAACCAGGAAGTGCTCGAAAACTAGAGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093939.4 |
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| CDS-3UTR CAA 90 bp | GGTGAGCCAGCTGCCGACTCTTGGATAGTTAACACTCTGATTTGGTTTGATGTTAGAACGTCTACATTTTaGCTTGGGTATCAAAGTGAA | + |
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Preference number: 5 (lower is better) Translates to: GEPAADSWIVNTLIWFDVRTSTF*LGYQSE Trigger: TTCACTTTGATACCCAAGCAAAAATGTAGACGTTCT...AACATCAAACCAAATCAGAGTGTTAACTATCCAAGAGTCGGCAGCTGGCTCACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093939.4 |
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| CDS CCA 90 bp | TTTCGGGAGAGATTAGTCAGCTCACATAAGAAGTTATACACACGATaGCATTCAAGTTCATCCCAACCTGCTGTTAAGGTCTGTAAAAAC | + |
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Preference number: 5 (lower is better) Translates to: FRERLVSSHKKLYTR*HSSSSQPAVKVCKN Trigger: GTTTTTACAGACCTTAACAGCAGGTTGGGATGAACTTGAATGCCATCGTGTGTATAACTTCTTATGTGAGCTGACTAATCTCTCCCGAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093939.4 |
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| CDS TCA 90 bp | AAAATTCGAGTTAACCAAAATGCAGAATCACTTCGATGTGTCCAGTaGTCAAGTAGGACATTCCGACAGAATAGTCTAACCCTTAACTCT | + |
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Preference number: 5 (lower is better) Translates to: KIRVNQNAESLRCVQ*SSRTFRQNSLTLNS Trigger: AGAGTTAAGGGTTAGACTATTCTGTCGGAATGTCCTACTTGATCACTGGACACATCGAAGTGATTCTGCATTTTGGTTAACTCGAATTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093939.4 |
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| CDS-3UTR CAA 90 bp | TCTAAAAGTCAGTATTACAAATCCTTAGAGAACATGTGGGCTGTATCTGCTCAATTGCCTGATTCACCATaGGCCATGGCTTTAAAATTC | + |
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Preference number: 5 (lower is better) Translates to: SKSQYYKSLENMWAVSAQLPDSP*AMALKF Trigger: GAATTTTAAAGCCATGGCCAATGGTGAATCAGGCAA...TTGAGCAGATACAGCCCACATGTTCTCTAAGGATTTGTAATACTGACTTTTAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093939.4 |
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| CDS CAA 90 bp | ATGCTCTGCAGGAAGCTCTTCCTCTCTGCTGCAGTGCTGAAGACTTaGCAGACTTTCTGCATCATTCTGACTGTCCAGTCCATGCAGTAC | + |
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Preference number: 6 (lower is better) Translates to: MLCRKLFLSAAVLKT*QTFCIILTVQSMQY Trigger: GTACTGCATGGACTGGACAGTCAGAATGATGCAGAAAGTCTGCAAAGTCTTCAGCACTGCAGCAGAGAGGAAGAGCTTCCTGCAGAGCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093939.4 |
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| CDS GCA 72 bp | CTGTCATCGTCATCGCGATCTCCCGACATAACAGGCTaGAGCATTTCCATCGTGACACAGGCAAAAGCATTT | + |
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Preference number: 6 (lower is better) Translates to: LSSSSRSPDITG*SISIVTQAKAF Trigger: AAATGCTTTTGCCTGTGTCACGATGGAAATGCTGCAGCCTGTTATGTCGGGAGATCGCGATGACGATGACAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093939.4 |
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| CDS CAA 72 bp | AGGAAGCTCTTCCTCTCTGCTGCAGTGCTGAAGACTTaGCAGACTTTCTGCATCATTCTGACTGTCCAGTCC | + |
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Preference number: 6 (lower is better) Translates to: RKLFLSAAVLKT*QTFCIILTVQS Trigger: GGACTGGACAGTCAGAATGATGCAGAAAGTCTGCAAAGTCTTCAGCACTGCAGCAGAGAGGAAGAGCTTCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093939.4 |
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| CDS CAA 90 bp | GCTCGTCCATTTACAGCTTTACTGGCCATGAAAGTGAAGCAGATGTaGTTCCCGCTCAGGATTAGGAGGCGTGCATTATTCTCCAGAAGC | + |
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Preference number: 6 (lower is better) Translates to: ARPFTALLAMKVKQM*FPLRIRRRALFSRS Trigger: GCTTCTGGAGAATAATGCACGCCTCCTAATCCTGAGCGGGAACAACATCTGCTTCACTTTCATGGCCAGTAAAGCTGTAAATGGACGAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093939.4 |
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| CDS GCA 72 bp | CTCTCTGCTGCAGTGCTGAAGACTTTGCAGACTTTCTaGATCATTCTGACTGTCCAGTCCATGCAGTACAAC | + |
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Preference number: 6 (lower is better) Translates to: LSAAVLKTLQTF*IILTVQSMQYN Trigger: GTTGTACTGCATGGACTGGACAGTCAGAATGATGCAGAAAGTCTGCAAAGTCTTCAGCACTGCAGCAGAGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093939.4 |
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| CDS CAA 72 bp | TTTACAGCTTTACTGGCCATGAAAGTGAAGCAGATGTaGTTCCCGCTCAGGATTAGGAGGCGTGCATTATTC | + |
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Preference number: 6 (lower is better) Translates to: FTALLAMKVKQM*FPLRIRRRALF Trigger: GAATAATGCACGCCTCCTAATCCTGAGCGGGAACAACATCTGCTTCACTTTCATGGCCAGTAAAGCTGTAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093939.4 |
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| CDS CAA 90 bp | CAGAATAGTCTAACCCTTAACTCTAGTTTTCGAGCACTTCCTGGTTaGTTGCAGACAACTGTCTGCATCTTTCGGGAGAGATTAGTCAGC | + |
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Preference number: 6 (lower is better) Translates to: QNSLTLNSSFRALPG*LQTTVCIFRERLVS Trigger: GCTGACTAATCTCTCCCGAAAGATGCAGACAGTTGTCTGCAACAAACCAGGAAGTGCTCGAAAACTAGAGTTAAGGGTTAGACTATTCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093939.4 |
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| CDS CAA 72 bp | ACCCTTAACTCTAGTTTTCGAGCACTTCCTGGTTTGTaGCAGACAACTGTCTGCATCTTTCGGGAGAGATTA | + |
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Preference number: 6 (lower is better) Translates to: TLNSSFRALPGL*QTTVCIFRERL Trigger: TAATCTCTCCCGAAAGATGCAGACAGTTGTCTGCAACAAACCAGGAAGTGCTCGAAAACTAGAGTTAAGGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093939.4 |
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| CDS CAA 72 bp | CTTTCTCACACACCAAAGCCAAAAAGACTACAAGTCTaGCCAGTTCAACGGCTCGTCCATTTACAGCTTTAC | + |
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Preference number: 6 (lower is better) Translates to: LSHTPKPKRLQV*PVQRLVHLQLY Trigger: GTAAAGCTGTAAATGGACGAGCCGTTGAACTGGCAAGACTTGTAGTCTTTTTGGCTTTGGTGTGTGAGAAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093939.4 |
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| CDS CAA 90 bp | AATAGTCTAACCCTTAACTCTAGTTTTCGAGCACTTCCTGGTTTGTaGCAGACAACTGTCTGCATCTTTCGGGAGAGATTAGTCAGCTCA | + |
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Preference number: 6 (lower is better) Translates to: NSLTLNSSFRALPGL*QTTVCIFRERLVSS Trigger: TGAGCTGACTAATCTCTCCCGAAAGATGCAGACAGTTGTCTGCAACAAACCAGGAAGTGCTCGAAAACTAGAGTTAAGGGTTAGACTATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093939.4 |
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| CDS CAA 90 bp | GATAGTTCATCTACAAGACTGATGACATCATCTGCTGTCCAGCCTTaGGCACCTGTGTCATACAGTAACTTAATGGCATTAGCCAAACCT | + |
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Preference number: 6 (lower is better) Translates to: DSSSTRLMTSSAVQP*APVSYSNLMALAKP Trigger: AGGTTTGGCTAATGCCATTAAGTTACTGTATGACACAGGTGCCAAAGGCTGGACAGCAGATGATGTCATCAGTCTTGTAGATGAACTATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093939.4 |
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| CDS TCA 72 bp | GCAGTCTCTTCTTTTGTGCCAGGCAGATCAAGGTCATaGAAGTTCTGTAGTAAAAGTCTCCTACTTCCAGAT | + |
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Preference number: 6 (lower is better) Translates to: AVSSFVPGRSRS*KFCSKSLLLPD Trigger: ATCTGGAAGTAGGAGACTTTTACTACAGAACTTTCATGACCTTGATCTGCCTGGCACAAAAGAAGAGACTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093939.4 |
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| CDS CAA 72 bp | TCTACAAGACTGATGACATCATCTGCTGTCCAGCCTTaGGCACCTGTGTCATACAGTAACTTAATGGCATTA | + |
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Preference number: 6 (lower is better) Translates to: STRLMTSSAVQP*APVSYSNLMAL Trigger: TAATGCCATTAAGTTACTGTATGACACAGGTGCCAAAGGCTGGACAGCAGATGATGTCATCAGTCTTGTAGA 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093939.4 |
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| CDS TCA 72 bp | GTTAACCAAAATGCAGAATCACTTCGATGTGTCCAGTaGTCAAGTAGGACATTCCGACAGAATAGTCTAACC | + |
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Preference number: 6 (lower is better) Translates to: VNQNAESLRCVQ*SSRTFRQNSLT Trigger: GGTTAGACTATTCTGTCGGAATGTCCTACTTGATCACTGGACACATCGAAGTGATTCTGCATTTTGGTTAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093939.4 |
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| CDS CCA 72 bp | AGATTAGTCAGCTCACATAAGAAGTTATACACACGATaGCATTCAAGTTCATCCCAACCTGCTGTTAAGGTC | + |
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Preference number: 6 (lower is better) Translates to: RLVSSHKKLYTR*HSSSSQPAVKV Trigger: GACCTTAACAGCAGGTTGGGATGAACTTGAATGCCATCGTGTGTATAACTTCTTATGTGAGCTGACTAATCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093939.4 |
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| CDS TCA 72 bp | CCTTCTATCATTTCCTGCCAAATCACCTGCCCATCATaGGGAGATGTTGGTCCAAAGATAATATATAGCAAT | + |
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Preference number: 6 (lower is better) Translates to: PSIISCQITCPS*GDVGPKIIYSN Trigger: ATTGCTATATATTATCTTTGGACCAACATCTCCTCATGATGGGCAGGTGATTTGGCAGGAAATGATAGAAGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093939.4 |
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| CDS CAA 90 bp | GGTGTTGCAAAAATAGCTGGAGTGATGATTAGAACGTCTACATTTTaGCTTGGGTATCAAAGTGAAACTGGTATTTACTCTAGACGCCAT | + |
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Preference number: 6 (lower is better) Translates to: GVAKIAGVMIRTSTF*LGYQSETGIYSRRH Trigger: ATGGCGTCTAGAGTAAATACCAGTTTCACTTTGATACCCAAGCAAAAATGTAGACGTTCTAATCATCACTCCAGCTATTTTTGCAACACC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000093939.4 |
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| CDS CAA 72 bp | AAAATAGCTGGAGTGATGATTAGAACGTCTACATTTTaGCTTGGGTATCAAAGTGAAACTGGTATTTACTCT | + |
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Preference number: 6 (lower is better) Translates to: KIAGVMIRTSTF*LGYQSETGIYS Trigger: AGAGTAAATACCAGTTTCACTTTGATACCCAAGCAAAAATGTAGACGTTCTAATCATCACTCCAGCTATTTT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093939.4 |
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