Pregenerated sensors for FBXO46 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000050428Ensembl transcript IDs: ENSMUST00000053109.5, ENSMUST00000165913.2
Found 302 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CAAAAGGATATGAACTCAGAGATCTGCCTGCCTCTGCCTTCCAAATaGTGGGACGAAAGTCGTGGGCCACCACTGCCTGGCACCTGCCCC | + |
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Preference number: 1 (lower is better) Translates to: QKDMNSEICLPLPSK*WDESRGPPLPGTCP Trigger: GGGGCAGGTGCCAGGCAGTGGTGGCCCACGACTTTCGTCCCAGCATTTGGAAGGCAGAGGCAGGCAGATCTCTGAGTTCATATCCTTTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053109.5 |
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| 3UTR GCA 90 bp | TGCCTCTGCCTTCCAAATGCTGGGACGAAAGTCGTGGGCCACCACTaGCTGGCACCTGCCCCCAGCGTGTCTCATGTATATAAAAATGAG | + |
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Preference number: 1 (lower is better) Translates to: CLCLPNAGTKVVGHH*LAPAPSVSHVYKNE Trigger: CTCATTTTTATATACATGAGACACGCTGGGGGCAGGTGCCAGGCAGTGGTGGCCCACGACTTTCGTCCCAGCATTTGGAAGGCAGAGGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000053109.5 |
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| 3UTR CCA 90 bp | GGAAGAAGAATCCTGGCGAAATTCAGACCCACTGGCCTGTCCCTCTaGCTTGCTTGTCATCCAGGAGTGAGGCAAGGGGCTTCACAGCTT | + |
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Preference number: 1 (lower is better) Translates to: GRRILAKFRPTGLSL*LACHPGVRQGASQL Trigger: AAGCTGTGAAGCCCCTTGCCTCACTCCTGGATGACAAGCAAGCCAGAGGGACAGGCCAGTGGGTCTGAATTTCGCCAGGATTCTTCTTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053109.5 |
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| 3UTR CCA 90 bp | AGGACCCCAAAGTGGAAGAAGAATCCTGGCGAAATTCAGACCCACTaGCCTGTCCCTCTGGCTTGCTTGTCATCCAGGAGTGAGGCAAGG | + |
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Preference number: 1 (lower is better) Translates to: RTPKWKKNPGEIQTH*PVPLACLSSRSEAR Trigger: CCTTGCCTCACTCCTGGATGACAAGCAAGCCAGAGGGACAGGCCAGTGGGTCTGAATTTCGCCAGGATTCTTCTTCCACTTTGGGGTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053109.5 |
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| 3UTR CCA 90 bp | TCTGCCTTCCAAATGCTGGGACGAAAGTCGTGGGCCACCACTGCCTaGCACCTGCCCCCAGCGTGTCTCATGTATATAAAAATGAGAGGC | + |
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Preference number: 1 (lower is better) Translates to: SAFQMLGRKSWATTA*HLPPACLMYIKMRG Trigger: GCCTCTCATTTTTATATACATGAGACACGCTGGGGGCAGGTGCCAGGCAGTGGTGGCCCACGACTTTCGTCCCAGCATTTGGAAGGCAGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000053109.5 |
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| 3UTR GCA 90 bp | GCTACTCATACATCACACGCACAAAAGGATATGAACTCAGAGATCTaGCTGCCTCTGCCTTCCAAATGCTGGGACGAAAGTCGTGGGCCA | + |
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Preference number: 1 (lower is better) Translates to: ATHTSHAQKDMNSEI*LPLPSKCWDESRGP Trigger: TGGCCCACGACTTTCGTCCCAGCATTTGGAAGGCAGAGGCAGGCAGATCTCTGAGTTCATATCCTTTTGTGCGTGTGATGTATGAGTAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053109.5 |
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| 3UTR CCA 90 bp | GCACCTGCCCCCAGCGTGTCTCATGTATATAAAAATGAGAGGCTGTaGAGACAGTTCAGTAGTGGAGTGGCTGCATGCAAGCATGAAGAT | + |
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Preference number: 1 (lower is better) Translates to: APAPSVSHVYKNERL*RQFSSGVAACKHED Trigger: ATCTTCATGCTTGCATGCAGCCACTCCACTACTGAACTGTCTCCACAGCCTCTCATTTTTATATACATGAGACACGCTGGGGGCAGGTGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000053109.5 |
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| 3UTR GCA 90 bp | GTCCAGATTAGCCACAAGCTCAGAATCTTCCTACTCAGTCCTGAGTaGTGGGATAACAGGTTTATACCTTGCCATAGCCAGCCAGAGGTT | + |
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Preference number: 1 (lower is better) Translates to: VQISHKLRIFLLSPE*WDNRFIPCHSQPEV Trigger: AACCTCTGGCTGGCTATGGCAAGGTATAAACCTGTTATCCCAGCACTCAGGACTGAGTAGGAAGATTCTGAGCTTGTGGCTAATCTGGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053109.5 |
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| 3UTR CCA 90 bp | CAGATTAGCCACAAGCTCAGAATCTTCCTACTCAGTCCTGAGTGCTaGGATAACAGGTTTATACCTTGCCATAGCCAGCCAGAGGTTCTC | + |
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Preference number: 1 (lower is better) Translates to: QISHKLRIFLLSPEC*DNRFIPCHSQPEVL Trigger: GAGAACCTCTGGCTGGCTATGGCAAGGTATAAACCTGTTATCCCAGCACTCAGGACTGAGTAGGAAGATTCTGAGCTTGTGGCTAATCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053109.5 |
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| 3UTR GCA 90 bp | AAAAATGAGAGGCTGTGGAGACAGTTCAGTAGTGGAGTGGCTGCATaGAAGCATGAAGATCTGAAATCCAAACCTCACCCTCCACATAAG | + |
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Preference number: 1 (lower is better) Translates to: KNERLWRQFSSGVAA*KHEDLKSKPHPPHK Trigger: CTTATGTGGAGGGTGAGGTTTGGATTTCAGATCTTCATGCTTGCATGCAGCCACTCCACTACTGAACTGTCTCCACAGCCTCTCATTTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053109.5 |
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| 3UTR GCA 90 bp | ACTACAGTACCAACAGGGCATCATCACATCATAGTGGGTCATGACTaGACCTTCAATCTCAGTACCCGAGAGACAGAAGCAAGTAGATTT | + |
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Preference number: 1 (lower is better) Translates to: TTVPTGHHHIIVGHD*TFNLSTRETEASRF Trigger: AAATCTACTTGCTTCTGTCTCTCGGGTACTGAGATTGAAGGTGCAGTCATGACCCACTATGATGTGATGATGCCCTGTTGGTACTGTAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053109.5 |
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| 3UTR-3UTR GCA 90 bp | AGCATGCAGCGCCTTGGTAAGCACAGCTCCAAAGACAACTGGGGGAGGCACAGACTGCCGTCTGCCCCCTaGTGGTGGGTCCCTGGGGTG | + |
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Preference number: 2 (lower is better) Translates to: SMQRLGKHSSKDNWGRHRLPSAP*WWVPGV Trigger: CACCCCAGGGACCCACCAGCAGGGGGCAGACGGCAG...TCTGTGCCTCCCCCAGTTGTCTTTGGAGCTGTGCTTACCAAGGCGCTGCATGCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000053109.5 ENSMUST00000165913.2 |
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| 3UTR-3UTR CCA 90 bp | CAGCGCCTTGGTAAGCACAGCTCCAAAGACAACTGGGGGAGGCACAGAACGAAGCCGTCTGCCCCCTGCTaGTGGGTCCCTGGGGTGGAG | + |
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Preference number: 2 (lower is better) Translates to: QRLGKHSSKDNWGRHRTKPSAPC*WVPGVE Trigger: CTCCACCCCAGGGACCCACCAGCAGGGGGCAGACGG...CTTCGTTCTGTGCCTCCCCCAGTTGTCTTTGGAGCTGTGCTTACCAAGGCGCTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000053109.5 ENSMUST00000165913.2 |
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| 3UTR-3UTR TCA 90 bp | GACAACTGGGGGAGGCACAGAACGAAGGGCCAGCTTGAGGAAAGCCTCAGGTGGGTAGGTGTCGGCTGGTaGCTCAGTCCTGGTCCCCAG | + |
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Preference number: 2 (lower is better) Translates to: DNWGRHRTKGQLEESLRWVGVGW*LSPGPQ Trigger: CTGGGGACCAGGACTGAGTCACCAGCCGACACCTAC...CCACCTGAGGCTTTCCTCAAGCTGGCCCTTCGTTCTGTGCCTCCCCCAGTTGTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053109.5 ENSMUST00000165913.2 |
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| 3UTR-3UTR CCA 90 bp | TGGGGGAGGCACAGAACGAAGGGCCAGCTTGAGGAAAGCCTCAGGTGGTACCAATCTGCCCCCTGCTGGTaGGTCCCTGGGGTGGAGAGA | + |
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Preference number: 2 (lower is better) Translates to: WGRHRTKGQLEESLRWYQSAPCW*VPGVER Trigger: TCTCTCCACCCCAGGGACCCACCAGCAGGGGGCAGA...TTGGTACCACCTGAGGCTTTCCTCAAGCTGGCCCTTCGTTCTGTGCCTCCCCCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000053109.5 ENSMUST00000165913.2 |
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| 3UTR-3UTR CCA 90 bp | GACAACTGGGGGAGGCACAGAACGAAGGGCCAGCTTGAGGAAAGCCTCAGGTGGTGGTCCCAGTTCTGGTaGGAGATGGATGCTGCCGCA | + |
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Preference number: 2 (lower is better) Translates to: DNWGRHRTKGQLEESLRWWSQFW*EMDAAA Trigger: TGCGGCAGCATCCATCTCCCACCAGAACTGGGACCA...CCACCTGAGGCTTTCCTCAAGCTGGCCCTTCGTTCTGTGCCTCCCCCAGTTGTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053109.5 ENSMUST00000165913.2 |
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| 3UTR-3UTR CCA 90 bp | GACAACTGGGGGAGGCACAGAACGAAGGGCCAGCTTGAGGAAAGCCTCAGGTGGACCTGGTCCCAGTTCTaGTGGGAGATGGATGCTGCC | + |
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Preference number: 2 (lower is better) Translates to: DNWGRHRTKGQLEESLRWTWSQF*WEMDAA Trigger: GGCAGCATCCATCTCCCACCAGAACTGGGACCAGGT...CCACCTGAGGCTTTCCTCAAGCTGGCCCTTCGTTCTGTGCCTCCCCCAGTTGTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053109.5 ENSMUST00000165913.2 |
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| 3UTR-3UTR CCA 90 bp | CAGCGCCTTGGTAAGCACAGCTCCAAAGACAACTGGGGGAGGCACAGAACGAAGCTGGTGACTCAGTCCTaGTCCCCAGCTCCCGGCAAA | + |
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Preference number: 2 (lower is better) Translates to: QRLGKHSSKDNWGRHRTKLVTQS*SPAPGK Trigger: TTTGCCGGGAGCTGGGGACCAGGACTGAGTCACCAG...CTTCGTTCTGTGCCTCCCCCAGTTGTCTTTGGAGCTGTGCTTACCAAGGCGCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053109.5 ENSMUST00000165913.2 |
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| 3UTR-3UTR GCA 90 bp | CTCCTCTGCCACCAAGGGACTTCCCTTTCTGTCACAGGAGGACTCCCTTGCAGTTCGGCTAGGGATGGGTaGCTTCTCCCTTTCCAGTCC | + |
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Preference number: 2 (lower is better) Translates to: LLCHQGTSLSVTGGLPCSSARDG*LLPFQS Trigger: GGACTGGAAAGGGAGAAGGCACCCATCCCTAGCCGA...ACTGCAAGGGAGTCCTCCTGTGACAGAAAGGGAAGTCCCTTGGTGGCAGAGGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053109.5 |
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| 3UTR-3UTR CCA 90 bp | CTTGGTAAGCACAGCTCCAAAGACAACTGGGGGAGGCACAGAACGAAGGGCCAGTGGTCCCAGTTCTGGTaGGAGATGGATGCTGCCGCA | + |
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Preference number: 2 (lower is better) Translates to: LGKHSSKDNWGRHRTKGQWSQFW*EMDAAA Trigger: TGCGGCAGCATCCATCTCCCACCAGAACTGGGACCA...CTGGCCCTTCGTTCTGTGCCTCCCCCAGTTGTCTTTGGAGCTGTGCTTACCAAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053109.5 ENSMUST00000165913.2 |
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| 3UTR-3UTR CCA 90 bp | GCTACTCATACATCACACGCACAAAAGGATATGAACTCAGAGATCTGCCTGCCTCCGTCTGCCCCCTGCTaGTGGGTCCCTGGGGTGGAG | + |
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Preference number: 2 (lower is better) Translates to: ATHTSHAQKDMNSEICLPPSAPC*WVPGVE Trigger: CTCCACCCCAGGGACCCACCAGCAGGGGGCAGACGG...AGGCAGGCAGATCTCTGAGTTCATATCCTTTTGTGCGTGTGATGTATGAGTAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000053109.5 |
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| 3UTR-3UTR TCA 90 bp | ACAAACAAAAACAAGCCAGGCTCCCTAGCTGGGTGGTGGTGGCGCACGCTTTTAAGGCAGGTGGATCTCTaGGTTCCATGCCAGCCTGGT | + |
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Preference number: 2 (lower is better) Translates to: TNKNKPGSLAGWWWRTLLRQVDL*VPCQPG Trigger: ACCAGGCTGGCATGGAACTCAGAGATCCACCTGCCT...TAAAAGCGTGCGCCACCACCACCCAGCTAGGGAGCCTGGCTTGTTTTTGTTTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053109.5 |
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| 3UTR-3UTR CCA 90 bp | GGGATAACAGGTTTATACCTTGCCATAGCCAGCCAGAGGTTCTCAAGCCCAACACTGCTGGTGGGTCCCTaGGGTGGAGAGACTCGATGG | + |
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Preference number: 2 (lower is better) Translates to: GITGLYLAIASQRFSSPTLLVGP*GGETRW Trigger: CCATCGAGTCTCTCCACCCCAGGGACCCACCAGCAG...TGTTGGGCTTGAGAACCTCTGGCTGGCTATGGCAAGGTATAAACCTGTTATCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053109.5 |
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| 3UTR-3UTR CCA 90 bp | GCCAGTTTGGTGAATGCACAGTTGCTTAGGAAACACACTCCAGGAAAACCACAGTCTGCCCCCTGCTGGTaGGTCCCTGGGGTGGAGAGA | + |
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Preference number: 2 (lower is better) Translates to: ASLVNAQLLRKHTPGKPQSAPCW*VPGVER Trigger: TCTCTCCACCCCAGGGACCCACCAGCAGGGGGCAGA...CTGTGGTTTTCCTGGAGTGTGTTTCCTAAGCAACTGTGCATTCACCAAACTGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000053109.5 |
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| 3UTR-3UTR TCA 90 bp | ACAAACAAAAACAAGCCAGGCTCCCTAGCTGGGTGGTGGTGGCGCACGCTTTTAAACGAAGGGCCAGCTTaGGGAAAGCCTCAGGTGGTA | + |
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Preference number: 2 (lower is better) Translates to: TNKNKPGSLAGWWWRTLLNEGPA*GKPQVV Trigger: TACCACCTGAGGCTTTCCTCAAGCTGGCCCTTCGTT...TAAAAGCGTGCGCCACCACCACCCAGCTAGGGAGCCTGGCTTGTTTTTGTTTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053109.5 |
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| 3UTR-3UTR TCA 90 bp | ATAAAAATGAGAGGCTGTGGAGACAGTTCAGTAGTGGAGTGGCTGCATGCAAGCCACAGACCACAGAGATaGGGGCCCCCAGGGATGGGT | + |
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Preference number: 2 (lower is better) Translates to: IKMRGCGDSSVVEWLHASHRPQR*GPPGMG Trigger: ACCCATCCCTGGGGGCCCTCATCTCTGTGGTCTGTG...GCTTGCATGCAGCCACTCCACTACTGAACTGTCTCCACAGCCTCTCATTTTTAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000053109.5 |
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| 3UTR-3UTR GCA 90 bp | ACAAACAAAAACAAGCCAGGCTCCCTAGCTGGGTGGTGGTGGCGCACGCTTTTATGTGTGGAGCTCCTCTaGCACCAAGGGACTTCCCTT | + |
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Preference number: 2 (lower is better) Translates to: TNKNKPGSLAGWWWRTLLCVELL*HQGTSL Trigger: AAGGGAAGTCCCTTGGTGGCAGAGGAGCTCCACACA...TAAAAGCGTGCGCCACCACCACCCAGCTAGGGAGCCTGGCTTGTTTTTGTTTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053109.5 |
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| 3UTR-3UTR GCA 90 bp | ACAAACAAAAACAAGCCAGGCTCCCTAGCTGGGTGGTGGTGGCGCACGCTTTTAAGATCTGCCTGCCTCTaGCTTCCAAATGCTGGGACG | + |
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Preference number: 2 (lower is better) Translates to: TNKNKPGSLAGWWWRTLLRSACL*LPNAGT Trigger: CGTCCCAGCATTTGGAAGGCAGAGGCAGGCAGATCT...TAAAAGCGTGCGCCACCACCACCCAGCTAGGGAGCCTGGCTTGTTTTTGTTTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053109.5 |
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| 3UTR-3UTR CCA 90 bp | ACAAACAAAAACAAGCCAGGCTCCCTAGCTGGGTGGTGGTGGCGCACGCTTTTAGGCAGTAGAGGCAGGTaGATCTCTGAGTTCCATGCC | + |
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Preference number: 2 (lower is better) Translates to: TNKNKPGSLAGWWWRTLLGSRGR*ISEFHA Trigger: GGCATGGAACTCAGAGATCCACCTGCCTCTACTGCC...TAAAAGCGTGCGCCACCACCACCCAGCTAGGGAGCCTGGCTTGTTTTTGTTTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053109.5 |
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| 3UTR-3UTR TCA 90 bp | GCTACTCATACATCACACGCACAAAAGGATATGAACTCAGAGATCTGCCTGCCTGTAGGTGTCGGCTGGTaGCTCAGTCCTGGTCCCCAG | + |
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Preference number: 2 (lower is better) Translates to: ATHTSHAQKDMNSEICLPVGVGW*LSPGPQ Trigger: CTGGGGACCAGGACTGAGTCACCAGCCGACACCTAC...AGGCAGGCAGATCTCTGAGTTCATATCCTTTTGTGCGTGTGATGTATGAGTAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053109.5 |
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| 3UTR-3UTR GCA 90 bp | ATACAGACACTGGGAATTGAACCTGGATCCTCTGGAAGGGTAGCCATTGCTCTTAAATTAGCTGCCGTCTaGCCCCTGCTGGTGGGTCCC | + |
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Preference number: 2 (lower is better) Translates to: IQTLGIEPGSSGRVAIALKLAAV*PLLVGP Trigger: GGGACCCACCAGCAGGGGGCAGACGGCAGCTAATTT...AAGAGCAATGGCTACCCTTCCAGAGGATCCAGGTTCAATTCCCAGTGTCTGTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053109.5 |
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| 3UTR-3UTR CCA 90 bp | GATTCACCCCAAACCTACTACAGTACCAACAGGGCATCATCACATCATAGTGGGCTGGTGACTCAGTCCTaGTCCCCAGCTCCCGGCAAA | + |
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Preference number: 2 (lower is better) Translates to: DSPQTYYSTNRASSHHSGLVTQS*SPAPGK Trigger: TTTGCCGGGAGCTGGGGACCAGGACTGAGTCACCAG...CCCACTATGATGTGATGATGCCCTGTTGGTACTGTAGTAGGTTTGGGGTGAATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053109.5 |
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| 3UTR-3UTR CCA 90 bp | CCACACACGAGACGCTCCCGGAGCCACAATGAAGGAGAAAAGAAAATGAAACCCAGCTCCAAAGACAACTaGGGGAGGCACAGAACGAAG | + |
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Preference number: 2 (lower is better) Translates to: PHTRRSRSHNEGEKKMKPSSKDN*GRHRTK Trigger: CTTCGTTCTGTGCCTCCCCCAGTTGTCTTTGGAGCT...GGGTTTCATTTTCTTTTCTCCTTCATTGTGGCTCCGGGAGCGTCTCGTGTGTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000053109.5 |
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| 3UTR-3UTR GCA 90 bp | GATTCACCCCAAACCTACTACAGTACCAACAGGGCATCATCACATCATAGTGGGCCTCTGCCTTCCAAATaGTGGGACGAAAGTCGTGGG | + |
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Preference number: 2 (lower is better) Translates to: DSPQTYYSTNRASSHHSGPLPSK*WDESRG Trigger: CCCACGACTTTCGTCCCAGCATTTGGAAGGCAGAGG...CCCACTATGATGTGATGATGCCCTGTTGGTACTGTAGTAGGTTTGGGGTGAATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053109.5 |
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| 3UTR-3UTR GCA 90 bp | GCTACTCATACATCACACGCACAAAAGGATATGAACTCAGAGATCTGCCTGCCTCTGGGGTGGGGTAGTTaGAGAGACCCTAATGCCTCA | + |
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Preference number: 2 (lower is better) Translates to: ATHTSHAQKDMNSEICLPLGWGS*RDPNAS Trigger: TGAGGCATTAGGGTCTCTGCAACTACCCCACCCCAG...AGGCAGGCAGATCTCTGAGTTCATATCCTTTTGTGCGTGTGATGTATGAGTAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000053109.5 |
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| 3UTR-3UTR TCA 90 bp | CGCACAAAAGGATATGAACTCAGAGATCTGCCTGCCTCTGCCTTCCAAATGCTGGCAAGCATGAAGATCTaGAATCCAAACCTCACCCTC | + |
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Preference number: 2 (lower is better) Translates to: RTKGYELRDLPASAFQMLASMKI*NPNLTL Trigger: GAGGGTGAGGTTTGGATTTCAGATCTTCATGCTTGC...CAGCATTTGGAAGGCAGAGGCAGGCAGATCTCTGAGTTCATATCCTTTTGTGCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053109.5 |
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| 3UTR-3UTR GCA 90 bp | GATTCACCCCAAACCTACTACAGTACCAACAGGGCATCATCACATCATAGTGGGACTCAGAGATCTGCCTaGCTCTGCCTTCCAAATGCT | + |
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Preference number: 2 (lower is better) Translates to: DSPQTYYSTNRASSHHSGTQRSA*LCLPNA Trigger: AGCATTTGGAAGGCAGAGGCAGGCAGATCTCTGAGT...CCCACTATGATGTGATGATGCCCTGTTGGTACTGTAGTAGGTTTGGGGTGAATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053109.5 |
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| 3UTR-3UTR CCA 90 bp | CGCACAAAAGGATATGAACTCAGAGATCTGCCTGCCTCTGCCTTCCAAATGCTGGTGGAAGAAGAATCCTaGCGAAATTCAGACCCACTG | + |
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Preference number: 2 (lower is better) Translates to: RTKGYELRDLPASAFQMLVEEES*RNSDPL Trigger: CAGTGGGTCTGAATTTCGCCAGGATTCTTCTTCCAC...CAGCATTTGGAAGGCAGAGGCAGGCAGATCTCTGAGTTCATATCCTTTTGTGCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053109.5 |
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| 3UTR-3UTR CCA 90 bp | GCTACTCATACATCACACGCACAAAAGGATATGAACTCAGAGATCTGCCTGCCTAAAGAAACTTGTGGCTaGGGTGGGGTAGTTGCAGAG | + |
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Preference number: 2 (lower is better) Translates to: ATHTSHAQKDMNSEICLPKETCG*GGVVAE Trigger: CTCTGCAACTACCCCACCCCAGCCACAAGTTTCTTT...AGGCAGGCAGATCTCTGAGTTCATATCCTTTTGTGCGTGTGATGTATGAGTAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053109.5 |
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| 3UTR-3UTR CCA 90 bp | GCCAGTTTGGTGAATGCACAGTTGCTTAGGAAACACACTCCAGGAAAACCACAGCGACCAATTCAAAATTaGTCAGACGCCACACACGAG | + |
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Preference number: 2 (lower is better) Translates to: ASLVNAQLLRKHTPGKPQRPIQN*SDATHE Trigger: CTCGTGTGTGGCGTCTGACCAATTTTGAATTGGTCG...CTGTGGTTTTCCTGGAGTGTGTTTCCTAAGCAACTGTGCATTCACCAAACTGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053109.5 |
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| 3UTR CAA 90 bp | CAATTAGACCAACTTACTCTTAAGGCCAGTTTGGTGAATGCACAGTaGCTTAGGAAACACACTCCAGGAAAACCACAGGTGGTGGGAACC | + |
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Preference number: 2 (lower is better) Translates to: QLDQLTLKASLVNAQ*LRKHTPGKPQVVGT Trigger: GGTTCCCACCACCTGTGGTTTTCCTGGAGTGTGTTTCCTAAGCAACTGTGCATTCACCAAACTGGCCTTAAGAGTAAGTTGGTCTAATTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053109.5 |
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| 3UTR-3UTR TCA 90 bp | GCCAGTTTGGTGAATGCACAGTTGCTTAGGAAACACACTCCAGGAAAACCACAGCTATCTAAAGTGGGCTaGAAATGTAGCTCAGTGCCT | + |
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Preference number: 2 (lower is better) Translates to: ASLVNAQLLRKHTPGKPQLSKVG*KCSSVP Trigger: AGGCACTGAGCTACATTTTCAGCCCACTTTAGATAG...CTGTGGTTTTCCTGGAGTGTGTTTCCTAAGCAACTGTGCATTCACCAAACTGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053109.5 |
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| 3UTR-3UTR GCA 90 bp | AAACAAAAACAAGCCAGGCTCCCTAGCTGGGTGGTGGTGGCGCACGCTTTTAATAGGTCTGTTCATCTTTaGTCATTAAGTTCAAGGCCT | + |
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Preference number: 2 (lower is better) Translates to: KQKQARLPSWVVVAHAFNRSVHL*SLSSRP Trigger: AGGCCTTGAACTTAATGAGCAAAGATGAACAGACCT...ATTAAAAGCGTGCGCCACCACCACCCAGCTAGGGAGCCTGGCTTGTTTTTGTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053109.5 |
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| 3UTR-3UTR CCA 90 bp | CATCACACACGCCAGGCTGGGCACAGCGTTATAAATATTGATTTTATAGAAACGGAGAGGACCCCAAAGTaGAAGAAGAATCCTGGCGAA | + |
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Preference number: 2 (lower is better) Translates to: HHTRQAGHSVINIDFIETERTPK*KKNPGE Trigger: TTCGCCAGGATTCTTCTTCCACTTTGGGGTCCTCTC...CGTTTCTATAAAATCAATATTTATAACGCTGTGCCCAGCCTGGCGTGTGTGATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053109.5 |
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| 3UTR-3UTR CCA 90 bp | GCCAGTTTGGTGAATGCACAGTTGCTTAGGAAACACACTCCAGGAAAACCACAGAGTTCAAGGCCTGCCTaGGATAGAATGAATTCCAAA | + |
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Preference number: 2 (lower is better) Translates to: ASLVNAQLLRKHTPGKPQSSRPA*DRMNSK Trigger: TTTGGAATTCATTCTATCCCAGGCAGGCCTTGAACT...CTGTGGTTTTCCTGGAGTGTGTTTCCTAAGCAACTGTGCATTCACCAAACTGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053109.5 |
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| 3UTR-3UTR TCA 90 bp | ATACAGACACTGGGAATTGAACCTGGATCCTCTGGAAGGGTAGCCATTGCTCTTCTGATGATTTTAGTTTaGTTCCTGGAACCTACTGTG | + |
|
Preference number: 2 (lower is better) Translates to: IQTLGIEPGSSGRVAIALLMILV*FLEPTV Trigger: CACAGTAGGTTCCAGGAATCAAACTAAAATCATCAG...AAGAGCAATGGCTACCCTTCCAGAGGATCCAGGTTCAATTCCCAGTGTCTGTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053109.5 |
||
| 3UTR CAA 90 bp | TTTCAGTGGATAGAAATGCTGTTGCCTAAGCCTGATGATTTTAGTTaGATTCCTGGAACCTACTGTGGGAAGAGACCTATACACACGTGC | + |
|
Preference number: 2 (lower is better) Translates to: FQWIEMLLPKPDDFS*IPGTYCGKRPIHTC Trigger: GCACGTGTGTATAGGTCTCTTCCCACAGTAGGTTCCAGGAATCAAACTAAAATCATCAGGCTTAGGCAACAGCATTTCTATCCACTGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053109.5 |
||
| 3UTR TCA 72 bp | TGGATGCTGCCGCATGGACTGGTAGGTGTCGGCTGGTaGCTCAGTCCTGGTCCCCAGCTCCCGGCAAAGCGG | + |
|
Preference number: 3 (lower is better) Translates to: WMLPHGLVGVGW*LSPGPQLPAKR Trigger: CCGCTTTGCCGGGAGCTGGGGACCAGGACTGAGTCACCAGCCGACACCTACCAGTCCATGCGGCAGCATCCA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053109.5 ENSMUST00000165913.2 |
||
| 3UTR CCA 72 bp | AACTCAGAGATCTGCCTGCCTCTGCCTTCCAAATGCTaGGACGAAAGTCGTGGGCCACCACTGCCTGGCACC | + |
|
Preference number: 3 (lower is better) Translates to: NSEICLPLPSKC*DESRGPPLPGT Trigger: GGTGCCAGGCAGTGGTGGCCCACGACTTTCGTCCCAGCATTTGGAAGGCAGAGGCAGGCAGATCTCTGAGTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053109.5 |
||
| 3UTR GCA 72 bp | GGCGAAATTCAGACCCACTGGCCTGTCCCTCTGGCTTaGTTGTCATCCAGGAGTGAGGCAAGGGGCTTCACA | + |
|
Preference number: 3 (lower is better) Translates to: GEIQTHWPVPLA*LSSRSEARGFT Trigger: TGTGAAGCCCCTTGCCTCACTCCTGGATGACAAGCAAGCCAGAGGGACAGGCCAGTGGGTCTGAATTTCGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053109.5 |
||
| 3UTR GCA 72 bp | ATGAACTCAGAGATCTGCCTGCCTCTGCCTTCCAAATaGTGGGACGAAAGTCGTGGGCCACCACTGCCTGGC | + |
|
Preference number: 3 (lower is better) Translates to: MNSEICLPLPSK*WDESRGPPLPG Trigger: GCCAGGCAGTGGTGGCCCACGACTTTCGTCCCAGCATTTGGAAGGCAGAGGCAGGCAGATCTCTGAGTTCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053109.5 |
||
| 3UTR CCA 72 bp | ATCCTGGCGAAATTCAGACCCACTGGCCTGTCCCTCTaGCTTGCTTGTCATCCAGGAGTGAGGCAAGGGGCT | + |
|
Preference number: 3 (lower is better) Translates to: ILAKFRPTGLSL*LACHPGVRQGA Trigger: AGCCCCTTGCCTCACTCCTGGATGACAAGCAAGCCAGAGGGACAGGCCAGTGGGTCTGAATTTCGCCAGGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053109.5 |
||
| 3UTR-3UTR CAA 90 bp | CTCCTCTGCCACCAAGGGACTTCCCTTTCTGTCACAGGAGGACTCCCTTGCAGTAGAGCATGCAGCGCCTaGGTAAGCACAGCTCCAAAG | + |
|
Preference number: 3 (lower is better) Translates to: LLCHQGTSLSVTGGLPCSRACSA*VSTAPK Trigger: CTTTGGAGCTGTGCTTACCAAGGCGCTGCATGCTCT...ACTGCAAGGGAGTCCTCCTGTGACAGAAAGGGAAGTCCCTTGGTGGCAGAGGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053109.5 |
||
| 3UTR CCA 72 bp | TGCCTCAGAGAGGACCCCAAAGTGGAAGAAGAATCCTaGCGAAATTCAGACCCACTGGCCTGTCCCTCTGGC | + |
|
Preference number: 3 (lower is better) Translates to: CLREDPKVEEES*RNSDPLACPSG Trigger: GCCAGAGGGACAGGCCAGTGGGTCTGAATTTCGCCAGGATTCTTCTTCCACTTTGGGGTCCTCTCTGAGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053109.5 |
||
| 3UTR-3UTR CAA 90 bp | CTTGGTAAGCACAGCTCCAAAGACAACTGGGGGAGGCACAGAACGAAGGGCCAGAAGGTATTTGCCCTGTaGATCCCCAAACCTGGTCCC | + |
|
Preference number: 3 (lower is better) Translates to: LGKHSSKDNWGRHRTKGQKVFAL*IPKPGP Trigger: GGGACCAGGTTTGGGGATCAACAGGGCAAATACCTT...CTGGCCCTTCGTTCTGTGCCTCCCCCAGTTGTCTTTGGAGCTGTGCTTACCAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053109.5 ENSMUST00000165913.2 |
||
| 3UTR GCA 72 bp | GTCTTTCTGAGGCTTAGGGATTCGGCTAGGGATGGGTaGCTTCTCCCTTTCCAGTCCACTCTGCTAAGCAGA | + |
|
Preference number: 3 (lower is better) Translates to: VFLRLRDSARDG*LLPFQSTLLSR Trigger: TCTGCTTAGCAGAGTGGACTGGAAAGGGAGAAGGCACCCATCCCTAGCCGAATCCCTAAGCCTCAGAAAGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053109.5 |
||
| 3UTR CCA 72 bp | AAGTGGAAGAAGAATCCTGGCGAAATTCAGACCCACTaGCCTGTCCCTCTGGCTTGCTTGTCATCCAGGAGT | + |
|
Preference number: 3 (lower is better) Translates to: KWKKNPGEIQTH*PVPLACLSSRS Trigger: ACTCCTGGATGACAAGCAAGCCAGAGGGACAGGCCAGTGGGTCTGAATTTCGCCAGGATTCTTCTTCCACTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053109.5 |
||
| 3UTR-3UTR CAA 90 bp | ATAAAAATGAGAGGCTGTGGAGACAGTTCAGTAGTGGAGTGGCTGCATGCAAGCAAGGTATTTGCCCTGTaGATCCCCAAACCTGGTCCC | + |
|
Preference number: 3 (lower is better) Translates to: IKMRGCGDSSVVEWLHASKVFAL*IPKPGP Trigger: GGGACCAGGTTTGGGGATCAACAGGGCAAATACCTT...GCTTGCATGCAGCCACTCCACTACTGAACTGTCTCCACAGCCTCTCATTTTTAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053109.5 |
||
| 3UTR TCA 72 bp | AAAACCAACAGAGGTCAAGCAAGGTATTTGCCCTGTTaGTCCCCAAACCTGGTCCCAGTTCTGGTGGGAGAT | + |
|
Preference number: 3 (lower is better) Translates to: KTNRGQARYLPC*SPNLVPVLVGD Trigger: ATCTCCCACCAGAACTGGGACCAGGTTTGGGGATCAACAGGGCAAATACCTTGCTTGACCTCTGTTGGTTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053109.5 ENSMUST00000165913.2 |
||
| 3UTR TCA 72 bp | CACCCTCCACATAAGCTGAGCATGACAGCGCACATCTaGGTTCTGATGGATGAGAGGTATTCACAGTGTGTG | + |
|
Preference number: 3 (lower is better) Translates to: HPPHKLSMTAHI*VLMDERYSQCV Trigger: CACACACTGTGAATACCTCTCATCCATCAGAACTCAGATGTGCGCTGTCATGCTCAGCTTATGTGGAGGGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053109.5 |
||
| 3UTR GCA 72 bp | AGGCTGTGGAGACAGTTCAGTAGTGGAGTGGCTGCATaGAAGCATGAAGATCTGAAATCCAAACCTCACCCT | + |
|
Preference number: 3 (lower is better) Translates to: RLWRQFSSGVAA*KHEDLKSKPHP Trigger: AGGGTGAGGTTTGGATTTCAGATCTTCATGCTTGCATGCAGCCACTCCACTACTGAACTGTCTCCACAGCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053109.5 |
||
| 3UTR GCA 72 bp | TGGGAAGAGACCTATACACACGTGCAGTCCCACATGTaGACCTGTGCTACTCATACATCACACGCACAAAAG | + |
|
Preference number: 3 (lower is better) Translates to: WEETYTHVQSHM*TCATHTSHAQK Trigger: CTTTTGTGCGTGTGATGTATGAGTAGCACAGGTGCACATGTGGGACTGCACGTGTGTATAGGTCTCTTCCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053109.5 |
||
| 3UTR TCA 72 bp | AGTACCAACAGGGCATCATCACATCATAGTGGGTCATaGCTGCACCTTCAATCTCAGTACCCGAGAGACAGA | + |
|
Preference number: 3 (lower is better) Translates to: STNRASSHHSGS*LHLQSQYPRDR Trigger: TCTGTCTCTCGGGTACTGAGATTGAAGGTGCAGTCATGACCCACTATGATGTGATGATGCCCTGTTGGTACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053109.5 |
||
| 3UTR CCA 72 bp | CCCAGCGTGTCTCATGTATATAAAAATGAGAGGCTGTaGAGACAGTTCAGTAGTGGAGTGGCTGCATGCAAG | + |
|
Preference number: 3 (lower is better) Translates to: PSVSHVYKNERL*RQFSSGVAACK Trigger: CTTGCATGCAGCCACTCCACTACTGAACTGTCTCCACAGCCTCTCATTTTTATATACATGAGACACGCTGGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053109.5 |
||
| 3UTR CCA 72 bp | CACAAGCTCAGAATCTTCCTACTCAGTCCTGAGTGCTaGGATAACAGGTTTATACCTTGCCATAGCCAGCCA | + |
|
Preference number: 3 (lower is better) Translates to: HKLRIFLLSPEC*DNRFIPCHSQP Trigger: TGGCTGGCTATGGCAAGGTATAAACCTGTTATCCCAGCACTCAGGACTGAGTAGGAAGATTCTGAGCTTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053109.5 |
||
| 3UTR-3UTR CAA 90 bp | GGGATAACAGGTTTATACCTTGCCATAGCCAGCCAGAGGTTCTCAAGCCCAACACAGGTCTGTTCATCTTaGCTCATTAAGTTCAAGGCC | + |
|
Preference number: 3 (lower is better) Translates to: GITGLYLAIASQRFSSPTQVCSS*LIKFKA Trigger: GGCCTTGAACTTAATGAGCAAAGATGAACAGACCTG...TGTTGGGCTTGAGAACCTCTGGCTGGCTATGGCAAGGTATAAACCTGTTATCCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053109.5 |
||
| 3UTR TCA 72 bp | CCTGTGCTACTCATACATCACACGCACAAAAGGATATaGACTCAGAGATCTGCCTGCCTCTGCCTTCCAAAT | + |
|
Preference number: 3 (lower is better) Translates to: PVLLIHHTHKRI*TQRSACLCLPN Trigger: ATTTGGAAGGCAGAGGCAGGCAGATCTCTGAGTTCATATCCTTTTGTGCGTGTGATGTATGAGTAGCACAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053109.5 |
||
| 3UTR GCA 72 bp | GATCCTCTAGAACTGGCATTAAAGCCACGTGTGTACTaGCATATACAGACACTGGGAATTGAACCTGGATCC | + |
|
Preference number: 3 (lower is better) Translates to: DPLELALKPRVY*HIQTLGIEPGS Trigger: GGATCCAGGTTCAATTCCCAGTGTCTGTATATGGCAGTACACACGTGGCTTTAATGCCAGTTCTAGAGGATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053109.5 |
||
| 3UTR TCA 72 bp | CACTGTTGTGAGACATTTAAAACAACTAAGTCTTTCTaGGGCTTAGGGATTCGGCTAGGGATGGGTGCCTTC | + |
|
Preference number: 3 (lower is better) Translates to: HCCETFKTTKSF*GLGIRLGMGAF Trigger: GAAGGCACCCATCCCTAGCCGAATCCCTAAGCCTCAGAAAGACTTAGTTGTTTTAAATGTCTCACAACAGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053109.5 |
||
| 3UTR-3UTR CAA 90 bp | GATTCACCCCAAACCTACTACAGTACCAACAGGGCATCATCACATCATAGTGGGAGAGACTCTGGTAGTTaGAGGTTCAGAAGAAAACTT | + |
|
Preference number: 3 (lower is better) Translates to: DSPQTYYSTNRASSHHSGRDSGS*RFRRKL Trigger: AAGTTTTCTTCTGAACCTCAAACTACCAGAGTCTCT...CCCACTATGATGTGATGATGCCCTGTTGGTACTGTAGTAGGTTTGGGGTGAATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053109.5 |
||
| 3UTR CCA 72 bp | TCTGTTCATCTTTGCTCATTAAGTTCAAGGCCTGCCTaGGATAGAATGAATTCCAAACCTGCTTGGCAATTT | + |
|
Preference number: 3 (lower is better) Translates to: SVHLCSLSSRPA*DRMNSKPAWQF Trigger: AAATTGCCAAGCAGGTTTGGAATTCATTCTATCCCAGGCAGGCCTTGAACTTAATGAGCAAAGATGAACAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053109.5 |
||
| CDS-3UTR CCA 90 bp | GTGTCGGCTGGTGACTCAGTCCTGGTCCCCAGCTCCCGGCAAAGCGGGGAGGGGGAGGGCTGTGGAAGGTaGGCGCGGCTGGTTCTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: VSAGDSVLVPSSRQSGEGEGCGR*ARLVLG Trigger: TCCCAGAACCAGCCGCGCCCACCTTCCACAGCCCTC...CCCCTCCCCGCTTTGCCGGGAGCTGGGGACCAGGACTGAGTCACCAGCCGACAC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000053109.5 ENSMUST00000165913.2 |
||
| CDS-3UTR CCA 90 bp | GTGTCGGCTGGTGACTCAGTCCTGGTCCCCAGCTCCCGGCAAAGCGGGGAGGGGCTGGAGGAGCCTTGGTaGGCTCAAGGCAGCGCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: VSAGDSVLVPSSRQSGEGLEEPW*AQGSAS Trigger: GGAGGCGCTGCCTTGAGCCCACCAAGGCTCCTCCAG...CCCCTCCCCGCTTTGCCGGGAGCTGGGGACCAGGACTGAGTCACCAGCCGACAC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000053109.5 ENSMUST00000165913.2 |
||
| CDS-3UTR CCA 90 bp | GTGTCGGCTGGTGACTCAGTCCTGGTCCCCAGCTCCCGGCAAAGCGGGGAGGGGGGGTGGAGGCGGTGCTaGTGGAGTGTCCTCAGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: VSAGDSVLVPSSRQSGEGGWRRC*WSVLRP Trigger: AGGCCTGAGGACACTCCACCAGCACCGCCTCCACCC...CCCCTCCCCGCTTTGCCGGGAGCTGGGGACCAGGACTGAGTCACCAGCCGACAC 69% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000053109.5 ENSMUST00000165913.2 |
||
| CDS-3UTR CCA 90 bp | GTGTCGGCTGGTGACTCAGTCCTGGTCCCCAGCTCCCGGCAAAGCGGGGAGGGGCTGGCCAGGTGGGGGTaGCTCCTCAGGGCTCACTGT | + |
|
Preference number: 4 (lower is better) Translates to: VSAGDSVLVPSSRQSGEGLARWG*LLRAHC Trigger: ACAGTGAGCCCTGAGGAGCCACCCCCACCTGGCCAG...CCCCTCCCCGCTTTGCCGGGAGCTGGGGACCAGGACTGAGTCACCAGCCGACAC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000053109.5 ENSMUST00000165913.2 |
||
| CDS-3UTR CCA 90 bp | GTGTCGGCTGGTGACTCAGTCCTGGTCCCCAGCTCCCGGCAAAGCGGGGAGGGGGAGTGTCCTCAGGCCTaGTGGGGGCTGGTGTCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: VSAGDSVLVPSSRQSGEGECPQA*WGLVSH Trigger: GTGAGACACCAGCCCCCACCAGGCCTGAGGACACTC...CCCCTCCCCGCTTTGCCGGGAGCTGGGGACCAGGACTGAGTCACCAGCCGACAC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000053109.5 ENSMUST00000165913.2 |
||
| CDS-3UTR CCA 90 bp | GTGTCGGCTGGTGACTCAGTCCTGGTCCCCAGCTCCCGGCAAAGCGGGGAGGGGTGGAGGCGGTGCTGGTaGAGTGTCCTCAGGCCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: VSAGDSVLVPSSRQSGEGWRRCW*SVLRPG Trigger: ACCAGGCCTGAGGACACTCCACCAGCACCGCCTCCA...CCCCTCCCCGCTTTGCCGGGAGCTGGGGACCAGGACTGAGTCACCAGCCGACAC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000053109.5 ENSMUST00000165913.2 |
||
| CDS-3UTR GCA 90 bp | GTGTCGGCTGGTGACTCAGTCCTGGTCCCCAGCTCCCGGCAAAGCGGGGAGGGGCGGGGCCTGGCACTGTaGTTGGTATATCAGCTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: VSAGDSVLVPSSRQSGEGRGLAL*LVYQLG Trigger: CCCCAGCTGATATACCAAGCACAGTGCCAGGCCCCG...CCCCTCCCCGCTTTGCCGGGAGCTGGGGACCAGGACTGAGTCACCAGCCGACAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000053109.5 ENSMUST00000165913.2 |
||
| CDS-3UTR CCA 90 bp | GTGTCGGCTGGTGACTCAGTCCTGGTCCCCAGCTCCCGGCAAAGCGGGGAGGGGAAAGACCACGGGAGCTaGGGTACTGGGGCGCGGATA | + |
|
Preference number: 4 (lower is better) Translates to: VSAGDSVLVPSSRQSGEGKDHGS*GTGARI Trigger: TATCCGCGCCCCAGTACCCCAGCTCCCGTGGTCTTT...CCCCTCCCCGCTTTGCCGGGAGCTGGGGACCAGGACTGAGTCACCAGCCGACAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000053109.5 ENSMUST00000165913.2 |
||
| CDS-3UTR CCA 90 bp | GTGTCGGCTGGTGACTCAGTCCTGGTCCCCAGCTCCCGGCAAAGCGGGGAGGGGGCTTGGTATATCAGCTaGGGGTGGCTCAGGAGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: VSAGDSVLVPSSRQSGEGAWYIS*GWLRRP Trigger: GGGCCTCCTGAGCCACCCCCAGCTGATATACCAAGC...CCCCTCCCCGCTTTGCCGGGAGCTGGGGACCAGGACTGAGTCACCAGCCGACAC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000053109.5 ENSMUST00000165913.2 |
||
| CDS-3UTR GCA 90 bp | GTGTCGGCTGGTGACTCAGTCCTGGTCCCCAGCTCCCGGCAAAGCGGGGAGGGGAGCAGCAGCATGTACTaGCGTGGCTCCAGAAGACGC | + |
|
Preference number: 4 (lower is better) Translates to: VSAGDSVLVPSSRQSGEGSSSMY*RGSRRR Trigger: GCGTCTTCTGGAGCCACGGCAGTACATGCTGCTGCT...CCCCTCCCCGCTTTGCCGGGAGCTGGGGACCAGGACTGAGTCACCAGCCGACAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000053109.5 ENSMUST00000165913.2 |
||
| CDS-3UTR CCA 90 bp | GTGTCGGCTGGTGACTCAGTCCTGGTCCCCAGCTCCCGGCAAAGCGGGGAGGGGGCCTGGCACTGTGCTTaGTATATCAGCTGGGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: VSAGDSVLVPSSRQSGEGAWHCA*YISWGW Trigger: CCACCCCCAGCTGATATACCAAGCACAGTGCCAGGC...CCCCTCCCCGCTTTGCCGGGAGCTGGGGACCAGGACTGAGTCACCAGCCGACAC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000053109.5 ENSMUST00000165913.2 |
||
| CDS-3UTR TCA 90 bp | GTGTCGGCTGGTGACTCAGTCCTGGTCCCCAGCTCCCGGCAAAGCGGGGAGGGGATCTACATGGAATCCTaGTGCACCACAGTCCCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: VSAGDSVLVPSSRQSGEGIYMES*CTTVPG Trigger: GCCCGGGACTGTGGTGCATCAGGATTCCATGTAGAT...CCCCTCCCCGCTTTGCCGGGAGCTGGGGACCAGGACTGAGTCACCAGCCGACAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000053109.5 ENSMUST00000165913.2 |
||
| CDS-3UTR GCA 90 bp | GACAACTGGGGGAGGCACAGAACGAAGGGCCAGCTTGAGGAAAGCCTCAGGTGGGGTGCACTTGAGGGCTaGCAAGGCCCGCGTGGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: DNWGRHRTKGQLEESLRWGALEG*QGPRGQ Trigger: CTGCCCACGCGGGCCTTGGCAGCCCTCAAGTGCACC...CCACCTGAGGCTTTCCTCAAGCTGGCCCTTCGTTCTGTGCCTCCCCCAGTTGTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053109.5 ENSMUST00000165913.2 |
||
| CDS-3UTR GCA 90 bp | GTGTCGGCTGGTGACTCAGTCCTGGTCCCCAGCTCCCGGCAAAGCGGGGAGGGGACCCAGTTGTTGTCATaGAAGCCCAGGCGACAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: VSAGDSVLVPSSRQSGEGTQLLS*KPRRQP Trigger: AGGCTGTCGCCTGGGCTTGCATGACAACAACTGGGT...CCCCTCCCCGCTTTGCCGGGAGCTGGGGACCAGGACTGAGTCACCAGCCGACAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000053109.5 ENSMUST00000165913.2 |
||
| CDS-3UTR CCA 90 bp | GTGTCGGCTGGTGACTCAGTCCTGGTCCCCAGCTCCCGGCAAAGCGGGGAGGGGCTACTTCCACCACACTaGTGGGCCACAAAGAAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: VSAGDSVLVPSSRQSGEGLLPPH*WATKKA Trigger: GGCCTTCTTTGTGGCCCACCAGTGTGGTGGAAGTAG...CCCCTCCCCGCTTTGCCGGGAGCTGGGGACCAGGACTGAGTCACCAGCCGACAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000053109.5 ENSMUST00000165913.2 |
||
| CDS-3UTR CCA 90 bp | GTGTCGGCTGGTGACTCAGTCCTGGTCCCCAGCTCCCGGCAAAGCGGGGAGGGGATCCCCTTGAAGTGGTaGCAGGTGCACTTGAGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: VSAGDSVLVPSSRQSGEGIPLKW*QVHLRA Trigger: AGCCCTCAAGTGCACCTGCCACCACTTCAAGGGGAT...CCCCTCCCCGCTTTGCCGGGAGCTGGGGACCAGGACTGAGTCACCAGCCGACAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000053109.5 ENSMUST00000165913.2 |
||
| CDS-3UTR TCA 90 bp | CAGCGCCTTGGTAAGCACAGCTCCAAAGACAACTGGGGGAGGCACAGAACGAAGGGTGGCAGGTGCACTTaGGGGCTGCCAAGGCCCGCG | + |
|
Preference number: 4 (lower is better) Translates to: QRLGKHSSKDNWGRHRTKGGRCT*GLPRPA Trigger: CGCGGGCCTTGGCAGCCCTCAAGTGCACCTGCCACC...CTTCGTTCTGTGCCTCCCCCAGTTGTCTTTGGAGCTGTGCTTACCAAGGCGCTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053109.5 ENSMUST00000165913.2 |
||
| CDS-3UTR CCA 90 bp | GACAACTGGGGGAGGCACAGAACGAAGGGCCAGCTTGAGGAAAGCCTCAGGTGGCTGGAGGAGCCTTGGTaGGCTCAAGGCAGCGCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: DNWGRHRTKGQLEESLRWLEEPW*AQGSAS Trigger: GGAGGCGCTGCCTTGAGCCCACCAAGGCTCCTCCAG...CCACCTGAGGCTTTCCTCAAGCTGGCCCTTCGTTCTGTGCCTCCCCCAGTTGTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053109.5 ENSMUST00000165913.2 |
||
| CDS-3UTR CCA 90 bp | GACAACTGGGGGAGGCACAGAACGAAGGGCCAGCTTGAGGAAAGCCTCAGGTGGTCGGCCCCCTTGGTCTaGAGGAGCCTTGGTGGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: DNWGRHRTKGQLEESLRWSAPLV*RSLGGL Trigger: GAGCCCACCAAGGCTCCTCCAGACCAAGGGGGCCGA...CCACCTGAGGCTTTCCTCAAGCTGGCCCTTCGTTCTGTGCCTCCCCCAGTTGTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000053109.5 ENSMUST00000165913.2 |
||
| CDS-3UTR CCA 90 bp | GTGTCGGCTGGTGACTCAGTCCTGGTCCCCAGCTCCCGGCAAAGCGGGGAGGGGTGGCTTCATCAGCCCTaGCCAATAGGAACTCCACAT | + |
|
Preference number: 4 (lower is better) Translates to: VSAGDSVLVPSSRQSGEGWLHQP*PIGTPH Trigger: ATGTGGAGTTCCTATTGGCCAGGGCTGATGAAGCCA...CCCCTCCCCGCTTTGCCGGGAGCTGGGGACCAGGACTGAGTCACCAGCCGACAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000053109.5 ENSMUST00000165913.2 |
||
| 3UTR CAA 72 bp | GTGAGGGGCTGGGGGCATGGCTCAGTGGTAGAGCGGTaGCCTAGCACGTGTGGCTCTGGGTTCCATTCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: VRGWGHGSVVER*PSTCGSGFHSQ Trigger: CTGAGAATGGAACCCAGAGCCACACGTGCTAGGCAACCGCTCTACCACTGAGCCATGCCCCCAGCCCCTCAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053109.5 |
||
| CDS-3UTR TCA 90 bp | GACAACTGGGGGAGGCACAGAACGAAGGGCCAGCTTGAGGAAAGCCTCAGGTGGTCTGGGAATACTTGCTaGAGGGCCGGGGGCACCAGA | + |
|
Preference number: 4 (lower is better) Translates to: DNWGRHRTKGQLEESLRWSGNTC*RAGGTR Trigger: TCTGGTGCCCCCGGCCCTTCAGCAAGTATTCCCAGA...CCACCTGAGGCTTTCCTCAAGCTGGCCCTTCGTTCTGTGCCTCCCCCAGTTGTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000053109.5 ENSMUST00000165913.2 |
||
| CDS-3UTR TCA 90 bp | CTTGGTAAGCACAGCTCCAAAGACAACTGGGGGAGGCACAGAACGAAGGGCCAGGACAGACTGGCGGCTTaGGGGCTGTGGAAGGTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: LGKHSSKDNWGRHRTKGQDRLAA*GLWKVG Trigger: GCCCACCTTCCACAGCCCTCAAGCCGCCAGTCTGTC...CTGGCCCTTCGTTCTGTGCCTCCCCCAGTTGTCTTTGGAGCTGTGCTTACCAAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053109.5 ENSMUST00000165913.2 |
||
| CDS-3UTR GCA 90 bp | CTCCTCTGCCACCAAGGGACTTCCCTTTCTGTCACAGGAGGACTCCCTTGCAGTCCACGGCAGGTGGTGTaGTCTCCAAGTGCGCAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: LLCHQGTSLSVTGGLPCSPRQVV*SPSAQA Trigger: GGCCTGCGCACTTGGAGAGCACACCACCTGCCGTGG...ACTGCAAGGGAGTCCTCCTGTGACAGAAAGGGAAGTCCCTTGGTGGCAGAGGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053109.5 |
||
| CDS-3UTR GCA 90 bp | CAGCGCCTTGGTAAGCACAGCTCCAAAGACAACTGGGGGAGGCACAGAACGAAGCCACGGCAGGTGGTGTaGTCTCCAAGTGCGCAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: QRLGKHSSKDNWGRHRTKPRQVV*SPSAQA Trigger: GGCCTGCGCACTTGGAGAGCACACCACCTGCCGTGG...CTTCGTTCTGTGCCTCCCCCAGTTGTCTTTGGAGCTGTGCTTACCAAGGCGCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053109.5 ENSMUST00000165913.2 |
||
| CDS-3UTR GCA 90 bp | CAGCGCCTTGGTAAGCACAGCTCCAAAGACAACTGGGGGAGGCACAGAACGAAGGGAGGTGGGGGCTTCTaGAGCCACGGCAGGTGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: QRLGKHSSKDNWGRHRTKGGGGF*SHGRWC Trigger: ACACCACCTGCCGTGGCTGCAGAAGCCCCCACCTCC...CTTCGTTCTGTGCCTCCCCCAGTTGTCTTTGGAGCTGTGCTTACCAAGGCGCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000053109.5 ENSMUST00000165913.2 |
||
| CDS-3UTR GCA 90 bp | AGCATGCAGCGCCTTGGTAAGCACAGCTCCAAAGACAACTGGGGGAGGCACAGAAGGGGGTGGAGGCGGTaGTGGTGGAGTGTCCTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SMQRLGKHSSKDNWGRHRRGWRR*WWSVLR Trigger: CCTGAGGACACTCCACCAGCACCGCCTCCACCCCCT...TCTGTGCCTCCCCCAGTTGTCTTTGGAGCTGTGCTTACCAAGGCGCTGCATGCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000053109.5 ENSMUST00000165913.2 |
||
| CDS-3UTR CCA 90 bp | CTCCTCTGCCACCAAGGGACTTCCCTTTCTGTCACAGGAGGACTCCCTTGCAGTGAGGGCTGTGGAAGGTaGGCGCGGCTGGTTCTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: LLCHQGTSLSVTGGLPCSEGCGR*ARLVLG Trigger: TCCCAGAACCAGCCGCGCCCACCTTCCACAGCCCTC...ACTGCAAGGGAGTCCTCCTGTGACAGAAAGGGAAGTCCCTTGGTGGCAGAGGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053109.5 |
||
| CDS-3UTR CCA 90 bp | CTTGGTAAGCACAGCTCCAAAGACAACTGGGGGAGGCACAGAACGAAGGGCCAGAAGTGCGCAGGCCTGTaGTCGGGCTCAGTCCCGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LGKHSSKDNWGRHRTKGQKCAGL*SGSVPL Trigger: CAGCGGGACTGAGCCCGACCACAGGCCTGCGCACTT...CTGGCCCTTCGTTCTGTGCCTCCCCCAGTTGTCTTTGGAGCTGTGCTTACCAAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053109.5 ENSMUST00000165913.2 |
||
| CDS-3UTR CCA 90 bp | AGCATGCAGCGCCTTGGTAAGCACAGCTCCAAAGACAACTGGGGGAGGCACAGAAAGTGCGCAGGCCTGTaGTCGGGCTCAGTCCCGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SMQRLGKHSSKDNWGRHRKCAGL*SGSVPL Trigger: CAGCGGGACTGAGCCCGACCACAGGCCTGCGCACTT...TCTGTGCCTCCCCCAGTTGTCTTTGGAGCTGTGCTTACCAAGGCGCTGCATGCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053109.5 ENSMUST00000165913.2 |
||
| CDS-3UTR CCA 90 bp | CTTGGTAAGCACAGCTCCAAAGACAACTGGGGGAGGCACAGAACGAAGGGCCAGTCGGCCCCCTTGGTCTaGAGGAGCCTTGGTGGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: LGKHSSKDNWGRHRTKGQSAPLV*RSLGGL Trigger: GAGCCCACCAAGGCTCCTCCAGACCAAGGGGGCCGA...CTGGCCCTTCGTTCTGTGCCTCCCCCAGTTGTCTTTGGAGCTGTGCTTACCAAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000053109.5 ENSMUST00000165913.2 |
||
| CDS-3UTR CCA 90 bp | TGGGGGAGGCACAGAACGAAGGGCCAGCTTGAGGAAAGCCTCAGGTGGTACCAACCTTCTCGGCCCCCTTaGTCTGGAGGAGCCTTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: WGRHRTKGQLEESLRWYQPSRPP*SGGALV Trigger: CACCAAGGCTCCTCCAGACCAAGGGGGCCGAGAAGG...TTGGTACCACCTGAGGCTTTCCTCAAGCTGGCCCTTCGTTCTGTGCCTCCCCCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000053109.5 ENSMUST00000165913.2 |
||
| CDS-3UTR CCA 90 bp | AGCATGCAGCGCCTTGGTAAGCACAGCTCCAAAGACAACTGGGGGAGGCACAGAGGAGGGCTGTCCCGCTaGGCCTCAAAGTGGGCCACT | + |
|
Preference number: 4 (lower is better) Translates to: SMQRLGKHSSKDNWGRHRGGLSR*ASKWAT Trigger: AGTGGCCCACTTTGAGGCCCAGCGGGACAGCCCTCC...TCTGTGCCTCCCCCAGTTGTCTTTGGAGCTGTGCTTACCAAGGCGCTGCATGCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053109.5 ENSMUST00000165913.2 |
||
| CDS-3UTR CCA 90 bp | AGCATGCAGCGCCTTGGTAAGCACAGCTCCAAAGACAACTGGGGGAGGCACAGAGAAGAGCTGGCCAGGTaGGGGTGGCTCCTCAGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: SMQRLGKHSSKDNWGRHREELAR*GWLLRA Trigger: AGCCCTGAGGAGCCACCCCCACCTGGCCAGCTCTTC...TCTGTGCCTCCCCCAGTTGTCTTTGGAGCTGTGCTTACCAAGGCGCTGCATGCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053109.5 ENSMUST00000165913.2 |
||
| CDS-3UTR CCA 90 bp | CTTGGTAAGCACAGCTCCAAAGACAACTGGGGGAGGCACAGAACGAAGGGCCAGGAAGAGCTGGCCAGGTaGGGGTGGCTCCTCAGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: LGKHSSKDNWGRHRTKGQEELAR*GWLLRA Trigger: AGCCCTGAGGAGCCACCCCCACCTGGCCAGCTCTTC...CTGGCCCTTCGTTCTGTGCCTCCCCCAGTTGTCTTTGGAGCTGTGCTTACCAAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053109.5 ENSMUST00000165913.2 |
||
| CDS-3UTR CCA 90 bp | GACAACTGGGGGAGGCACAGAACGAAGGGCCAGCTTGAGGAAAGCCTCAGGTGGCTTCCACCACACTGGTaGGCCACAAAGAAGGCCACC | + |
|
Preference number: 4 (lower is better) Translates to: DNWGRHRTKGQLEESLRWLPPHW*ATKKAT Trigger: GGTGGCCTTCTTTGTGGCCCACCAGTGTGGTGGAAG...CCACCTGAGGCTTTCCTCAAGCTGGCCCTTCGTTCTGTGCCTCCCCCAGTTGTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053109.5 ENSMUST00000165913.2 |
||
| CDS-3UTR CCA 90 bp | AGCATGCAGCGCCTTGGTAAGCACAGCTCCAAAGACAACTGGGGGAGGCACAGATGGGGGTCACCTCAGTaGCAGGGGTTCCTTCTCGGC | + |
|
Preference number: 4 (lower is better) Translates to: SMQRLGKHSSKDNWGRHRWGSPQ*QGFLLG Trigger: GCCGAGAAGGAACCCCTGCCACTGAGGTGACCCCCA...TCTGTGCCTCCCCCAGTTGTCTTTGGAGCTGTGCTTACCAAGGCGCTGCATGCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000053109.5 ENSMUST00000165913.2 |
||
| CDS-3UTR CCA 90 bp | CTTGGTAAGCACAGCTCCAAAGACAACTGGGGGAGGCACAGAACGAAGGGCCAGTGTCCTCAGGCCTGGTaGGGGCTGGTGTCTCACCCT | + |
|
Preference number: 4 (lower is better) Translates to: LGKHSSKDNWGRHRTKGQCPQAW*GLVSHP Trigger: AGGGTGAGACACCAGCCCCCACCAGGCCTGAGGACA...CTGGCCCTTCGTTCTGTGCCTCCCCCAGTTGTCTTTGGAGCTGTGCTTACCAAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053109.5 ENSMUST00000165913.2 |
||
| CDS-3UTR CCA 90 bp | AGCATGCAGCGCCTTGGTAAGCACAGCTCCAAAGACAACTGGGGGAGGCACAGAGAGTGTCCTCAGGCCTaGTGGGGGCTGGTGTCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: SMQRLGKHSSKDNWGRHRECPQA*WGLVSH Trigger: GTGAGACACCAGCCCCCACCAGGCCTGAGGACACTC...TCTGTGCCTCCCCCAGTTGTCTTTGGAGCTGTGCTTACCAAGGCGCTGCATGCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000053109.5 ENSMUST00000165913.2 |
||
| CDS-3UTR CCA 90 bp | GACAACTGGGGGAGGCACAGAACGAAGGGCCAGCTTGAGGAAAGCCTCAGGTGGGCCTGGCACTGTGCTTaGTATATCAGCTGGGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: DNWGRHRTKGQLEESLRWAWHCA*YISWGW Trigger: CCACCCCCAGCTGATATACCAAGCACAGTGCCAGGC...CCACCTGAGGCTTTCCTCAAGCTGGCCCTTCGTTCTGTGCCTCCCCCAGTTGTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000053109.5 ENSMUST00000165913.2 |
||
| 3UTR CAA 72 bp | CCAAGGGACTTCCCTTTCTGTCACAGGAGGACTCCCTaGCAGTCACAGACCACAGAGATGAGGGCCCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: PRDFPFCHRRTP*QSQTTEMRAPR Trigger: CCTGGGGGCCCTCATCTCTGTGGTCTGTGACTGCAAGGGAGTCCTCCTGTGACAGAAAGGGAAGTCCCTTGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053109.5 |
||
| CDS-3UTR TCA 90 bp | ACAAACAAAAACAAGCCAGGCTCCCTAGCTGGGTGGTGGTGGCGCACGCTTTTAGACAGACTGGCGGCTTaGGGGCTGTGGAAGGTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: TNKNKPGSLAGWWWRTLLDRLAA*GLWKVG Trigger: GCCCACCTTCCACAGCCCTCAAGCCGCCAGTCTGTC...TAAAAGCGTGCGCCACCACCACCCAGCTAGGGAGCCTGGCTTGTTTTTGTTTGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000053109.5 |
||
| CDS-3UTR TCA 90 bp | CTTGGTAAGCACAGCTCCAAAGACAACTGGGGGAGGCACAGAACGAAGGGCCAGCTCCAGGAAGTCGTGTaGCACATGCCGGTACAGGCG | + |
|
Preference number: 4 (lower is better) Translates to: LGKHSSKDNWGRHRTKGQLQEVV*HMPVQA Trigger: CGCCTGTACCGGCATGTGTCACACGACTTCCTGGAG...CTGGCCCTTCGTTCTGTGCCTCCCCCAGTTGTCTTTGGAGCTGTGCTTACCAAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053109.5 ENSMUST00000165913.2 |
||
| CDS-3UTR GCA 90 bp | ACAAACAAAAACAAGCCAGGCTCCCTAGCTGGGTGGTGGTGGCGCACGCTTTTAAGGGGGTGGAGGCGGTaGTGGTGGAGTGTCCTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: TNKNKPGSLAGWWWRTLLRGWRR*WWSVLR Trigger: CCTGAGGACACTCCACCAGCACCGCCTCCACCCCCT...TAAAAGCGTGCGCCACCACCACCCAGCTAGGGAGCCTGGCTTGTTTTTGTTTGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000053109.5 |
||
| CDS-3UTR CCA 90 bp | CTTGGTAAGCACAGCTCCAAAGACAACTGGGGGAGGCACAGAACGAAGGGCCAGTGCAAGAAGAAGAGCTaGCCAGGTGGGGGTGGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LGKHSSKDNWGRHRTKGQCKKKS*PGGGGS Trigger: GGAGCCACCCCCACCTGGCCAGCTCTTCTTCTTGCA...CTGGCCCTTCGTTCTGTGCCTCCCCCAGTTGTCTTTGGAGCTGTGCTTACCAAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000053109.5 ENSMUST00000165913.2 |
||
| CDS-3UTR CCA 90 bp | CTTGGTAAGCACAGCTCCAAAGACAACTGGGGGAGGCACAGAACGAAGGGCCAGCATGGTGGTAGGGTTTaGGGTGCCAGCGGCAGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: LGKHSSKDNWGRHRTKGQHGGRV*GASGRV Trigger: CACTCTGCCGCTGGCACCCCAAACCCTACCACCATG...CTGGCCCTTCGTTCTGTGCCTCCCCCAGTTGTCTTTGGAGCTGTGCTTACCAAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053109.5 ENSMUST00000165913.2 |
||
| CDS-3UTR TCA 90 bp | AGCATGCAGCGCCTTGGTAAGCACAGCTCCAAAGACAACTGGGGGAGGCACAGAGTGCCAGCGGCAGAGTaGCACATCACCCTTCTCGTA | + |
|
Preference number: 4 (lower is better) Translates to: SMQRLGKHSSKDNWGRHRVPAAE*HITLLV Trigger: TACGAGAAGGGTGATGTGTCACTCTGCCGCTGGCAC...TCTGTGCCTCCCCCAGTTGTCTTTGGAGCTGTGCTTACCAAGGCGCTGCATGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053109.5 ENSMUST00000165913.2 |
||
| CDS-3UTR GCA 90 bp | CCACACACGAGACGCTCCCGGAGCCACAATGAAGGAGAAAAGAAAATGAAACCCGGAGGTGGGGGCTTCTaGAGCCACGGCAGGTGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: PHTRRSRSHNEGEKKMKPGGGGF*SHGRWC Trigger: ACACCACCTGCCGTGGCTGCAGAAGCCCCCACCTCC...GGGTTTCATTTTCTTTTCTCCTTCATTGTGGCTCCGGGAGCGTCTCGTGTGTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000053109.5 |
||
| CDS-3UTR GCA 90 bp | CAGCGCCTTGGTAAGCACAGCTCCAAAGACAACTGGGGGAGGCACAGAACGAAGCTCAAAGTGGGCCACTaGCTCAGCAACTCGGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: QRLGKHSSKDNWGRHRTKLKVGH*LSNSAA Trigger: TGCAGCCGAGTTGCTGAGGCAGTGGCCCACTTTGAG...CTTCGTTCTGTGCCTCCCCCAGTTGTCTTTGGAGCTGTGCTTACCAAGGCGCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053109.5 ENSMUST00000165913.2 |
||
| CDS-3UTR GCA 90 bp | TGGGGGAGGCACAGAACGAAGGGCCAGCTTGAGGAAAGCCTCAGGTGGTACCAAATCTTGACGAGCACGTaGTCAGGCAGCAGCAGCATG | + |
|
Preference number: 4 (lower is better) Translates to: WGRHRTKGQLEESLRWYQILTST*SGSSSM Trigger: CATGCTGCTGCTGCCTGAGCACGTGCTCGTCAAGAT...TTGGTACCACCTGAGGCTTTCCTCAAGCTGGCCCTTCGTTCTGTGCCTCCCCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053109.5 ENSMUST00000165913.2 |
||
| CDS-3UTR GCA 90 bp | AATGCCTCAGAGAGGACCCCAAAGTGGAAGAAGAATCCTGGCGAAATTCAGACCGGTGCACTTGAGGGCTaGCAAGGCCCGCGTGGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: NASERTPKWKKNPGEIQTGALEG*QGPRGQ Trigger: CTGCCCACGCGGGCCTTGGCAGCCCTCAAGTGCACC...GGTCTGAATTTCGCCAGGATTCTTCTTCCACTTTGGGGTCCTCTCTGAGGCATT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053109.5 |
||
| CDS-3UTR GCA 90 bp | CAGCGCCTTGGTAAGCACAGCTCCAAAGACAACTGGGGGAGGCACAGAACGAAGTCTCACGATCGGCTCTaGGGCAGCACATCCAGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: QRLGKHSSKDNWGRHRTKSHDRL*GSTSSR Trigger: CCTACTGGATGTGCTGCCGCAGAGCCGATCGTGAGA...CTTCGTTCTGTGCCTCCCCCAGTTGTCTTTGGAGCTGTGCTTACCAAGGCGCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053109.5 ENSMUST00000165913.2 |
||
| CDS-3UTR CCA 90 bp | ACAAACAAAAACAAGCCAGGCTCCCTAGCTGGGTGGTGGTGGCGCACGCTTTTATGGGGGTCACCTCAGTaGCAGGGGTTCCTTCTCGGC | + |
|
Preference number: 4 (lower is better) Translates to: TNKNKPGSLAGWWWRTLLWGSPQ*QGFLLG Trigger: GCCGAGAAGGAACCCCTGCCACTGAGGTGACCCCCA...TAAAAGCGTGCGCCACCACCACCCAGCTAGGGAGCCTGGCTTGTTTTTGTTTGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000053109.5 |
||
| CDS-3UTR CCA 90 bp | CTTGGTAAGCACAGCTCCAAAGACAACTGGGGGAGGCACAGAACGAAGGGCCAGCATCCCCAGATGATGTaGGGGTCACCTCAGTGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LGKHSSKDNWGRHRTKGQHPQMM*GSPQWQ Trigger: CTGCCACTGAGGTGACCCCCACATCATCTGGGGATG...CTGGCCCTTCGTTCTGTGCCTCCCCCAGTTGTCTTTGGAGCTGTGCTTACCAAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000053109.5 ENSMUST00000165913.2 |
||
| CDS-3UTR CCA 90 bp | GACAACTGGGGGAGGCACAGAACGAAGGGCCAGCTTGAGGAAAGCCTCAGGTGGATGATCCCCTTGAAGTaGTGGCAGGTGCACTTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: DNWGRHRTKGQLEESLRWMIPLK*WQVHLR Trigger: CCTCAAGTGCACCTGCCACCACTTCAAGGGGATCAT...CCACCTGAGGCTTTCCTCAAGCTGGCCCTTCGTTCTGTGCCTCCCCCAGTTGTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053109.5 ENSMUST00000165913.2 |
||
| CDS-3UTR TCA 90 bp | GACAACTGGGGGAGGCACAGAACGAAGGGCCAGCTTGAGGAAAGCCTCAGGTGGGGTACAAGTCGCAGGTaGTTTTGTCTTTGGCTCGAG | + |
|
Preference number: 4 (lower is better) Translates to: DNWGRHRTKGQLEESLRWGTSRR*FCLWLE Trigger: CTCGAGCCAAAGACAAAATCACCTGCGACTTGTACC...CCACCTGAGGCTTTCCTCAAGCTGGCCCTTCGTTCTGTGCCTCCCCCAGTTGTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000053109.5 ENSMUST00000165913.2 |
||
| CDS-3UTR TCA 90 bp | AGCATGCAGCGCCTTGGTAAGCACAGCTCCAAAGACAACTGGGGGAGGCACAGAATCTACATGGAATCCTaGTGCACCACAGTCCCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: SMQRLGKHSSKDNWGRHRIYMES*CTTVPG Trigger: GCCCGGGACTGTGGTGCATCAGGATTCCATGTAGAT...TCTGTGCCTCCCCCAGTTGTCTTTGGAGCTGTGCTTACCAAGGCGCTGCATGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053109.5 ENSMUST00000165913.2 |
||
| CDS-3UTR GCA 90 bp | CAGCGCCTTGGTAAGCACAGCTCCAAAGACAACTGGGGGAGGCACAGAACGAAGTCTGGACCACGGGACTaGAAGAAGAAGAGCTGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: QRLGKHSSKDNWGRHRTKSGPRD*KKKSWP Trigger: TGGCCAGCTCTTCTTCTTGCAGTCCCGTGGTCCAGA...CTTCGTTCTGTGCCTCCCCCAGTTGTCTTTGGAGCTGTGCTTACCAAGGCGCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053109.5 ENSMUST00000165913.2 |
||
| CDS-3UTR GCA 90 bp | GACAACTGGGGGAGGCACAGAACGAAGGGCCAGCTTGAGGAAAGCCTCAGGTGGCCTTCTCGTATCTCTTaGGGCACTGCTTACAAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: DNWGRHRTKGQLEESLRWPSRIS*GTAYKG Trigger: ACCCTTGTAAGCAGTGCCGCAAGAGATACGAGAAGG...CCACCTGAGGCTTTCCTCAAGCTGGCCCTTCGTTCTGTGCCTCCCCCAGTTGTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053109.5 ENSMUST00000165913.2 |
||
| CDS-3UTR GCA 90 bp | CTCCTCTGCCACCAAGGGACTTCCCTTTCTGTCACAGGAGGACTCCCTTGCAGTACCCAGTTGTTGTCATaGAAGCCCAGGCGACAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: LLCHQGTSLSVTGGLPCSTQLLS*KPRRQP Trigger: AGGCTGTCGCCTGGGCTTGCATGACAACAACTGGGT...ACTGCAAGGGAGTCCTCCTGTGACAGAAAGGGAAGTCCCTTGGTGGCAGAGGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053109.5 |
||
| CDS-3UTR CCA 90 bp | AAACAAAAACAAGCCAGGCTCCCTAGCTGGGTGGTGGTGGCGCACGCTTTTAATTGTCCTCAGGCCTGGTaGGGGCTGGTGTCTCACCCT | + |
|
Preference number: 4 (lower is better) Translates to: KQKQARLPSWVVVAHAFNCPQAW*GLVSHP Trigger: AGGGTGAGACACCAGCCCCCACCAGGCCTGAGGACA...ATTAAAAGCGTGCGCCACCACCACCCAGCTAGGGAGCCTGGCTTGTTTTTGTTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000053109.5 |
||
| CDS-3UTR CCA 90 bp | AATGCCTCAGAGAGGACCCCAAAGTGGAAGAAGAATCCTGGCGAAATTCAGACCGGGTGGAGGCGGTGCTaGTGGAGTGTCCTCAGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: NASERTPKWKKNPGEIQTGWRRC*WSVLRP Trigger: AGGCCTGAGGACACTCCACCAGCACCGCCTCCACCC...GGTCTGAATTTCGCCAGGATTCTTCTTCCACTTTGGGGTCCTCTCTGAGGCATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053109.5 |
||
| CDS-3UTR CCA 90 bp | CGCACAAAAGGATATGAACTCAGAGATCTGCCTGCCTCTGCCTTCCAAATGCTGCTGGCCAGGTGGGGGTaGCTCCTCAGGGCTCACTGT | + |
|
Preference number: 4 (lower is better) Translates to: RTKGYELRDLPASAFQMLLARWG*LLRAHC Trigger: ACAGTGAGCCCTGAGGAGCCACCCCCACCTGGCCAG...CAGCATTTGGAAGGCAGAGGCAGGCAGATCTCTGAGTTCATATCCTTTTGTGCG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053109.5 |
||
| CDS-3UTR CCA 90 bp | ACAAACAAAAACAAGCCAGGCTCCCTAGCTGGGTGGTGGTGGCGCACGCTTTTAGCTTGGTATATCAGCTaGGGGTGGCTCAGGAGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: TNKNKPGSLAGWWWRTLLAWYIS*GWLRRP Trigger: GGGCCTCCTGAGCCACCCCCAGCTGATATACCAAGC...TAAAAGCGTGCGCCACCACCACCCAGCTAGGGAGCCTGGCTTGTTTTTGTTTGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000053109.5 |
||
| CDS-3UTR CCA 90 bp | AGCATGCAGCGCCTTGGTAAGCACAGCTCCAAAGACAACTGGGGGAGGCACAGACAGCATGTACTGCCGTaGCTCCAGAAGACGCTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: SMQRLGKHSSKDNWGRHRQHVLP*LQKTLD Trigger: ATCCAGCGTCTTCTGGAGCCACGGCAGTACATGCTG...TCTGTGCCTCCCCCAGTTGTCTTTGGAGCTGTGCTTACCAAGGCGCTGCATGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053109.5 ENSMUST00000165913.2 |
||
| 3UTR CAA 72 bp | GAAATTCAGACCCACTGGCCTGTCCCTCTGGCTTGCTaGTCATCCAGGAGTGAGGCAAGGGGCTTCACAGCT | + |
|
Preference number: 4 (lower is better) Translates to: EIQTHWPVPLAC*SSRSEARGFTA Trigger: AGCTGTGAAGCCCCTTGCCTCACTCCTGGATGACAAGCAAGCCAGAGGGACAGGCCAGTGGGTCTGAATTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053109.5 |
||
| CDS-3UTR GCA 90 bp | ACAAACAAAAACAAGCCAGGCTCCCTAGCTGGGTGGTGGTGGCGCACGCTTTTACTCAAAGTGGGCCACTaGCTCAGCAACTCGGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: TNKNKPGSLAGWWWRTLLLKVGH*LSNSAA Trigger: TGCAGCCGAGTTGCTGAGGCAGTGGCCCACTTTGAG...TAAAAGCGTGCGCCACCACCACCCAGCTAGGGAGCCTGGCTTGTTTTTGTTTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053109.5 |
||
| CDS-3UTR GCA 90 bp | AGCATGCAGCGCCTTGGTAAGCACAGCTCCAAAGACAACTGGGGGAGGCACAGAATAGGAACTCCACATTaGTGGGAAGGGCATCCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SMQRLGKHSSKDNWGRHRIGTPH*WEGHPW Trigger: CCAGGGATGCCCTTCCCAGCAATGTGGAGTTCCTAT...TCTGTGCCTCCCCCAGTTGTCTTTGGAGCTGTGCTTACCAAGGCGCTGCATGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053109.5 ENSMUST00000165913.2 |
||
| CDS-3UTR GCA 90 bp | CCACACACGAGACGCTCCCGGAGCCACAATGAAGGAGAAAAGAAAATGAAACCCCGGGGCCTGGCACTGTaGTTGGTATATCAGCTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: PHTRRSRSHNEGEKKMKPRGLAL*LVYQLG Trigger: CCCCAGCTGATATACCAAGCACAGTGCCAGGCCCCG...GGGTTTCATTTTCTTTTCTCCTTCATTGTGGCTCCGGGAGCGTCTCGTGTGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000053109.5 |
||
| CDS-3UTR CCA 90 bp | GATTCACCCCAAACCTACTACAGTACCAACAGGGCATCATCACATCATAGTGGGGGAGGGCTGTCCCGCTaGGCCTCAAAGTGGGCCACT | + |
|
Preference number: 4 (lower is better) Translates to: DSPQTYYSTNRASSHHSGGGLSR*ASKWAT Trigger: AGTGGCCCACTTTGAGGCCCAGCGGGACAGCCCTCC...CCCACTATGATGTGATGATGCCCTGTTGGTACTGTAGTAGGTTTGGGGTGAATC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053109.5 |
||
| CDS-3UTR CCA 90 bp | TGGGGGAGGCACAGAACGAAGGGCCAGCTTGAGGAAAGCCTCAGGTGGTACCAAGAGGGGCTGATAAGCTaGTACAAGTCGCAGGTGATT | + |
|
Preference number: 4 (lower is better) Translates to: WGRHRTKGQLEESLRWYQEGLIS*YKSQVI Trigger: AATCACCTGCGACTTGTACCAGCTTATCAGCCCCTC...TTGGTACCACCTGAGGCTTTCCTCAAGCTGGCCCTTCGTTCTGTGCCTCCCCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053109.5 ENSMUST00000165913.2 |
||
| CDS-3UTR CCA 90 bp | AGCATGCAGCGCCTTGGTAAGCACAGCTCCAAAGACAACTGGGGGAGGCACAGAATGATCCCCTTGAAGTaGTGGCAGGTGCACTTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: SMQRLGKHSSKDNWGRHRMIPLK*WQVHLR Trigger: CCTCAAGTGCACCTGCCACCACTTCAAGGGGATCAT...TCTGTGCCTCCCCCAGTTGTCTTTGGAGCTGTGCTTACCAAGGCGCTGCATGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053109.5 ENSMUST00000165913.2 |
||
| CDS-3UTR CCA 90 bp | AATGCCTCAGAGAGGACCCCAAAGTGGAAGAAGAATCCTGGCGAAATTCAGACCTGCTGTAGAGAGGAGTaGAGCAGGCTGGGAGGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: NASERTPKWKKNPGEIQTCCREE*SRLGGG Trigger: CCCACCTCCCAGCCTGCTCCACTCCTCTCTACAGCA...GGTCTGAATTTCGCCAGGATTCTTCTTCCACTTTGGGGTCCTCTCTGAGGCATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053109.5 |
||
| CDS-3UTR CCA 90 bp | GCCAGTTTGGTGAATGCACAGTTGCTTAGGAAACACACTCCAGGAAAACCACAGCCTTCTCGGCCCCCTTaGTCTGGAGGAGCCTTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: ASLVNAQLLRKHTPGKPQPSRPP*SGGALV Trigger: CACCAAGGCTCCTCCAGACCAAGGGGGCCGAGAAGG...CTGTGGTTTTCCTGGAGTGTGTTTCCTAAGCAACTGTGCATTCACCAAACTGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053109.5 |
||
| CDS-3UTR CCA 90 bp | CTCCTCTGCCACCAAGGGACTTCCCTTTCTGTCACAGGAGGACTCCCTTGCAGTGAGGGGCTGATAAGCTaGTACAAGTCGCAGGTGATT | + |
|
Preference number: 4 (lower is better) Translates to: LLCHQGTSLSVTGGLPCSEGLIS*YKSQVI Trigger: AATCACCTGCGACTTGTACCAGCTTATCAGCCCCTC...ACTGCAAGGGAGTCCTCCTGTGACAGAAAGGGAAGTCCCTTGGTGGCAGAGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053109.5 |
||
| CDS-3UTR CCA 90 bp | ATACAGACACTGGGAATTGAACCTGGATCCTCTGGAAGGGTAGCCATTGCTCTTTGGAGGCGGTGCTGGTaGAGTGTCCTCAGGCCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: IQTLGIEPGSSGRVAIALWRRCW*SVLRPG Trigger: ACCAGGCCTGAGGACACTCCACCAGCACCGCCTCCA...AAGAGCAATGGCTACCCTTCCAGAGGATCCAGGTTCAATTCCCAGTGTCTGTAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053109.5 |
||
| CDS-3UTR CCA 90 bp | GGGATAACAGGTTTATACCTTGCCATAGCCAGCCAGAGGTTCTCAAGCCCAACATGCAAGAAGAAGAGCTaGCCAGGTGGGGGTGGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: GITGLYLAIASQRFSSPTCKKKS*PGGGGS Trigger: GGAGCCACCCCCACCTGGCCAGCTCTTCTTCTTGCA...TGTTGGGCTTGAGAACCTCTGGCTGGCTATGGCAAGGTATAAACCTGTTATCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053109.5 |
||
| CDS-3UTR CCA 90 bp | CAGCGCCTTGGTAAGCACAGCTCCAAAGACAACTGGGGGAGGCACAGAACGAAGAGAATCATCGGGGCCTaGCACTGTGCTTGGTATATC | + |
|
Preference number: 4 (lower is better) Translates to: QRLGKHSSKDNWGRHRTKRIIGA*HCAWYI Trigger: GATATACCAAGCACAGTGCCAGGCCCCGATGATTCT...CTTCGTTCTGTGCCTCCCCCAGTTGTCTTTGGAGCTGTGCTTACCAAGGCGCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053109.5 ENSMUST00000165913.2 |
||
| CDS-3UTR CCA 90 bp | ACAAACAAAAACAAGCCAGGCTCCCTAGCTGGGTGGTGGTGGCGCACGCTTTTAATCCCCTTGAAGTGGTaGCAGGTGCACTTGAGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: TNKNKPGSLAGWWWRTLLIPLKW*QVHLRA Trigger: AGCCCTCAAGTGCACCTGCCACCACTTCAAGGGGAT...TAAAAGCGTGCGCCACCACCACCCAGCTAGGGAGCCTGGCTTGTTTTTGTTTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000053109.5 |
||
| CDS-3UTR TCA 90 bp | ATACAGACACTGGGAATTGAACCTGGATCCTCTGGAAGGGTAGCCATTGCTCTTCTCCAGGAAGTCGTGTaGCACATGCCGGTACAGGCG | + |
|
Preference number: 4 (lower is better) Translates to: IQTLGIEPGSSGRVAIALLQEVV*HMPVQA Trigger: CGCCTGTACCGGCATGTGTCACACGACTTCCTGGAG...AAGAGCAATGGCTACCCTTCCAGAGGATCCAGGTTCAATTCCCAGTGTCTGTAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053109.5 |
||
| CDS-3UTR GCA 90 bp | CGCACAAAAGGATATGAACTCAGAGATCTGCCTGCCTCTGCCTTCCAAATGCTGAGCAGCAGCATGTACTaGCGTGGCTCCAGAAGACGC | + |
|
Preference number: 4 (lower is better) Translates to: RTKGYELRDLPASAFQMLSSSMY*RGSRRR Trigger: GCGTCTTCTGGAGCCACGGCAGTACATGCTGCTGCT...CAGCATTTGGAAGGCAGAGGCAGGCAGATCTCTGAGTTCATATCCTTTTGTGCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053109.5 |
||
| CDS-3UTR GCA 90 bp | AAACAAAAACAAGCCAGGCTCCCTAGCTGGGTGGTGGTGGCGCACGCTTTTAATATCTTGACGAGCACGTaGTCAGGCAGCAGCAGCATG | + |
|
Preference number: 4 (lower is better) Translates to: KQKQARLPSWVVVAHAFNILTST*SGSSSM Trigger: CATGCTGCTGCTGCCTGAGCACGTGCTCGTCAAGAT...ATTAAAAGCGTGCGCCACCACCACCCAGCTAGGGAGCCTGGCTTGTTTTTGTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053109.5 |
||
| CDS-3UTR CCA 90 bp | CTTGGTAAGCACAGCTCCAAAGACAACTGGGGGAGGCACAGAACGAAGGGCCAGACCACCACATCTACATaGAATCCTGATGCACCACAG | + |
|
Preference number: 4 (lower is better) Translates to: LGKHSSKDNWGRHRTKGQTTTST*NPDAPQ Trigger: CTGTGGTGCATCAGGATTCCATGTAGATGTGGTGGT...CTGGCCCTTCGTTCTGTGCCTCCCCCAGTTGTCTTTGGAGCTGTGCTTACCAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053109.5 ENSMUST00000165913.2 |
||
| CDS-3UTR CCA 90 bp | TGGGGGAGGCACAGAACGAAGGGCCAGCTTGAGGAAAGCCTCAGGTGGTACCAACTTCCTTCACGTTCTTaGTGCCATCTTTGCCAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: WGRHRTKGQLEESLRWYQLPSRS*CHLCQR Trigger: TCTTTGGCAAAGATGGCACCAAGAACGTGAAGGAAG...TTGGTACCACCTGAGGCTTTCCTCAAGCTGGCCCTTCGTTCTGTGCCTCCCCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053109.5 ENSMUST00000165913.2 |
||
| CDS-3UTR CCA 90 bp | GATTCACCCCAAACCTACTACAGTACCAACAGGGCATCATCACATCATAGTGGGCATGGTGGTAGGGTTTaGGGTGCCAGCGGCAGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: DSPQTYYSTNRASSHHSGHGGRV*GASGRV Trigger: CACTCTGCCGCTGGCACCCCAAACCCTACCACCATG...CCCACTATGATGTGATGATGCCCTGTTGGTACTGTAGTAGGTTTGGGGTGAATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053109.5 |
||
| CDS-3UTR TCA 90 bp | GCTACTCATACATCACACGCACAAAAGGATATGAACTCAGAGATCTGCCTGCCTTCTGGGAATACTTGCTaGAGGGCCGGGGGCACCAGA | + |
|
Preference number: 4 (lower is better) Translates to: ATHTSHAQKDMNSEICLPSGNTC*RAGGTR Trigger: TCTGGTGCCCCCGGCCCTTCAGCAAGTATTCCCAGA...AGGCAGGCAGATCTCTGAGTTCATATCCTTTTGTGCGTGTGATGTATGAGTAGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053109.5 |
||
| CDS-3UTR TCA 90 bp | GCCAGTTTGGTGAATGCACAGTTGCTTAGGAAACACACTCCAGGAAAACCACAGGTGCCAGCGGCAGAGTaGCACATCACCCTTCTCGTA | + |
|
Preference number: 4 (lower is better) Translates to: ASLVNAQLLRKHTPGKPQVPAAE*HITLLV Trigger: TACGAGAAGGGTGATGTGTCACTCTGCCGCTGGCAC...CTGTGGTTTTCCTGGAGTGTGTTTCCTAAGCAACTGTGCATTCACCAAACTGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053109.5 |
||
| CDS-3UTR GCA 90 bp | CCACACACGAGACGCTCCCGGAGCCACAATGAAGGAGAAAAGAAAATGAAACCCATAGGAACTCCACATTaGTGGGAAGGGCATCCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: PHTRRSRSHNEGEKKMKPIGTPH*WEGHPW Trigger: CCAGGGATGCCCTTCCCAGCAATGTGGAGTTCCTAT...GGGTTTCATTTTCTTTTCTCCTTCATTGTGGCTCCGGGAGCGTCTCGTGTGTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053109.5 |
||
| CDS-3UTR GCA 90 bp | AGCATGCAGCGCCTTGGTAAGCACAGCTCCAAAGACAACTGGGGGAGGCACAGACCTTCACGTTCTTGGTaGCATCTTTGCCAAAGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: SMQRLGKHSSKDNWGRHRPSRSW*HLCQRR Trigger: TCTTCTTTGGCAAAGATGGCACCAAGAACGTGAAGG...TCTGTGCCTCCCCCAGTTGTCTTTGGAGCTGTGCTTACCAAGGCGCTGCATGCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053109.5 ENSMUST00000165913.2 |
||
| CDS-3UTR CCA 90 bp | AATGCCTCAGAGAGGACCCCAAAGTGGAAGAAGAATCCTGGCGAAATTCAGACCCTACTTCCACCACACTaGTGGGCCACAAAGAAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: NASERTPKWKKNPGEIQTLLPPH*WATKKA Trigger: GGCCTTCTTTGTGGCCCACCAGTGTGGTGGAAGTAG...GGTCTGAATTTCGCCAGGATTCTTCTTCCACTTTGGGGTCCTCTCTGAGGCATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053109.5 |
||
| CDS-3UTR CCA 90 bp | GCCAGTTTGGTGAATGCACAGTTGCTTAGGAAACACACTCCAGGAAAACCACAGCATCCCCAGATGATGTaGGGGTCACCTCAGTGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: ASLVNAQLLRKHTPGKPQHPQMM*GSPQWQ Trigger: CTGCCACTGAGGTGACCCCCACATCATCTGGGGATG...CTGTGGTTTTCCTGGAGTGTGTTTCCTAAGCAACTGTGCATTCACCAAACTGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000053109.5 |
||
| CDS-3UTR CCA 90 bp | CAGCGCCTTGGTAAGCACAGCTCCAAAGACAACTGGGGGAGGCACAGAACGAAGCTTCCTTCACGTTCTTaGTGCCATCTTTGCCAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: QRLGKHSSKDNWGRHRTKLPSRS*CHLCQR Trigger: TCTTTGGCAAAGATGGCACCAAGAACGTGAAGGAAG...CTTCGTTCTGTGCCTCCCCCAGTTGTCTTTGGAGCTGTGCTTACCAAGGCGCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053109.5 ENSMUST00000165913.2 |
||
| CDS-3UTR GCA 90 bp | CGCACAAAAGGATATGAACTCAGAGATCTGCCTGCCTCTGCCTTCCAAATGCTGCAGGGCCACCATTTCTaGTACAGAGACCAGGTCTAC | + |
|
Preference number: 4 (lower is better) Translates to: RTKGYELRDLPASAFQMLQGHHF*YRDQVY Trigger: GTAGACCTGGTCTCTGTAGCAGAAATGGTGGCCCTG...CAGCATTTGGAAGGCAGAGGCAGGCAGATCTCTGAGTTCATATCCTTTTGTGCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053109.5 |
||
| CDS-3UTR GCA 90 bp | GCCAGTTTGGTGAATGCACAGTTGCTTAGGAAACACACTCCAGGAAAACCACAGTCTGGACCACGGGACTaGAAGAAGAAGAGCTGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: ASLVNAQLLRKHTPGKPQSGPRD*KKKSWP Trigger: TGGCCAGCTCTTCTTCTTGCAGTCCCGTGGTCCAGA...CTGTGGTTTTCCTGGAGTGTGTTTCCTAAGCAACTGTGCATTCACCAAACTGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053109.5 |
||
| CDS-3UTR CCA 90 bp | GCTACTCATACATCACACGCACAAAAGGATATGAACTCAGAGATCTGCCTGCCTCTTCCACCACACTGGTaGGCCACAAAGAAGGCCACC | + |
|
Preference number: 4 (lower is better) Translates to: ATHTSHAQKDMNSEICLPLPPHW*ATKKAT Trigger: GGTGGCCTTCTTTGTGGCCCACCAGTGTGGTGGAAG...AGGCAGGCAGATCTCTGAGTTCATATCCTTTTGTGCGTGTGATGTATGAGTAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053109.5 |
||
| CDS-3UTR CCA 90 bp | ATACAGACACTGGGAATTGAACCTGGATCCTCTGGAAGGGTAGCCATTGCTCTTCAGCATGTACTGCCGTaGCTCCAGAAGACGCTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: IQTLGIEPGSSGRVAIALQHVLP*LQKTLD Trigger: ATCCAGCGTCTTCTGGAGCCACGGCAGTACATGCTG...AAGAGCAATGGCTACCCTTCCAGAGGATCCAGGTTCAATTCCCAGTGTCTGTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053109.5 |
||
| CDS-3UTR GCA 90 bp | CGCACAAAAGGATATGAACTCAGAGATCTGCCTGCCTCTGCCTTCCAAATGCTGCCTTCTCGTATCTCTTaGGGCACTGCTTACAAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: RTKGYELRDLPASAFQMLPSRIS*GTAYKG Trigger: ACCCTTGTAAGCAGTGCCGCAAGAGATACGAGAAGG...CAGCATTTGGAAGGCAGAGGCAGGCAGATCTCTGAGTTCATATCCTTTTGTGCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053109.5 |
||
| CDS-3UTR CCA 90 bp | CATCACACACGCCAGGCTGGGCACAGCGTTATAAATATTGATTTTATAGAAACGAAAGACCACGGGAGCTaGGGTACTGGGGCGCGGATA | + |
|
Preference number: 4 (lower is better) Translates to: HHTRQAGHSVINIDFIETKDHGS*GTGARI Trigger: TATCCGCGCCCCAGTACCCCAGCTCCCGTGGTCTTT...CGTTTCTATAAAATCAATATTTATAACGCTGTGCCCAGCCTGGCGTGTGTGATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053109.5 |
||
| CDS-3UTR CCA 90 bp | GGGATAACAGGTTTATACCTTGCCATAGCCAGCCAGAGGTTCTCAAGCCCAACATGGCTTCATCAGCCCTaGCCAATAGGAACTCCACAT | + |
|
Preference number: 4 (lower is better) Translates to: GITGLYLAIASQRFSSPTWLHQP*PIGTPH Trigger: ATGTGGAGTTCCTATTGGCCAGGGCTGATGAAGCCA...TGTTGGGCTTGAGAACCTCTGGCTGGCTATGGCAAGGTATAAACCTGTTATCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053109.5 |
||
| CDS-3UTR GCA 90 bp | AAACAAAAACAAGCCAGGCTCCCTAGCTGGGTGGTGGTGGCGCACGCTTTTAATCCTTCACGTTCTTGGTaGCATCTTTGCCAAAGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: KQKQARLPSWVVVAHAFNPSRSW*HLCQRR Trigger: TCTTCTTTGGCAAAGATGGCACCAAGAACGTGAAGG...ATTAAAAGCGTGCGCCACCACCACCCAGCTAGGGAGCCTGGCTTGTTTTTGTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053109.5 |
||
| CDS-3UTR GCA 90 bp | CATCACACACGCCAGGCTGGGCACAGCGTTATAAATATTGATTTTATAGAAACGTCTCACGATCGGCTCTaGGGCAGCACATCCAGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: HHTRQAGHSVINIDFIETSHDRL*GSTSSR Trigger: CCTACTGGATGTGCTGCCGCAGAGCCGATCGTGAGA...CGTTTCTATAAAATCAATATTTATAACGCTGTGCCCAGCCTGGCGTGTGTGATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053109.5 |
||
| CDS-3UTR CCA 90 bp | CGCACAAAAGGATATGAACTCAGAGATCTGCCTGCCTCTGCCTTCCAAATGCTGACCACCACATCTACATaGAATCCTGATGCACCACAG | + |
|
Preference number: 4 (lower is better) Translates to: RTKGYELRDLPASAFQMLTTTST*NPDAPQ Trigger: CTGTGGTGCATCAGGATTCCATGTAGATGTGGTGGT...CAGCATTTGGAAGGCAGAGGCAGGCAGATCTCTGAGTTCATATCCTTTTGTGCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053109.5 |
||
| CDS-3UTR CCA 90 bp | CATCACACACGCCAGGCTGGGCACAGCGTTATAAATATTGATTTTATAGAAACGAGAATCATCGGGGCCTaGCACTGTGCTTGGTATATC | + |
|
Preference number: 4 (lower is better) Translates to: HHTRQAGHSVINIDFIETRIIGA*HCAWYI Trigger: GATATACCAAGCACAGTGCCAGGCCCCGATGATTCT...CGTTTCTATAAAATCAATATTTATAACGCTGTGCCCAGCCTGGCGTGTGTGATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053109.5 |
||
| 3UTR CAA 72 bp | CTGTCTCAATTAGACCAACTTACTCTTAAGGCCAGTTaGGTGAATGCACAGTTGCTTAGGAAACACACTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LSQLDQLTLKAS*VNAQLLRKHTP Trigger: TGGAGTGTGTTTCCTAAGCAACTGTGCATTCACCAAACTGGCCTTAAGAGTAAGTTGGTCTAATTGAGACAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053109.5 |
||
| 3UTR CAA 72 bp | ATAGAAATGCTGTTGCCTAAGCCTGATGATTTTAGTTaGATTCCTGGAACCTACTGTGGGAAGAGACCTATA | + |
|
Preference number: 4 (lower is better) Translates to: IEMLLPKPDDFS*IPGTYCGKRPI Trigger: TATAGGTCTCTTCCCACAGTAGGTTCCAGGAATCAAACTAAAATCATCAGGCTTAGGCAACAGCATTTCTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053109.5 |
||
| 3UTR CAA 72 bp | GGGTCTGTGAAAAAGTTTCAGTGGATAGAAATGCTGTaGCCTAAGCCTGATGATTTTAGTTTGATTCCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: GSVKKFQWIEML*PKPDDFSLIPG Trigger: TCCAGGAATCAAACTAAAATCATCAGGCTTAGGCAACAGCATTTCTATCCACTGAAACTTTTTCACAGACCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053109.5 |
||
| CDS CCA 90 bp | GAGTGGAGCAGGCTGGGAGGTGGGGGCTTCTGCAGCCACGGCAGGTaGTGTGCTCTCCAAGTGCGCAGGCCTGTGGTCGGGCTCAGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: EWSRLGGGGFCSHGR*CALQVRRPVVGLSP Trigger: GGGACTGAGCCCGACCACAGGCCTGCGCACTTGGAGAGCACACCACCTGCCGTGGCTGCAGAAGCCCCCACCTCCCAGCCTGCTCCACTC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053109.5 ENSMUST00000165913.2 |
||
| CDS-3UTR CAA 90 bp | GTGTCGGCTGGTGACTCAGTCCTGGTCCCCAGCTCCCGGCAAAGCGGGGAGGGGGGACAGACTGGCGGCTaGAGGGCTGTGGAAGGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: VSAGDSVLVPSSRQSGEGGQTGG*RAVEGG Trigger: CCCACCTTCCACAGCCCTCAAGCCGCCAGTCTGTCC...CCCCTCCCCGCTTTGCCGGGAGCTGGGGACCAGGACTGAGTCACCAGCCGACAC 69% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000053109.5 ENSMUST00000165913.2 |
||
| CDS GCA 90 bp | GAGGTGGGGGCTTCTGCAGCCACGGCAGGTGGTGTGCTCTCCAAGTaGGCAGGCCTGTGGTCGGGCTCAGTCCCGCTGCTTGTGTCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: EVGASAATAGGVLSK*AGLWSGSVPLLVSG Trigger: TCCTGACACAAGCAGCGGGACTGAGCCCGACCACAGGCCTGCGCACTTGGAGAGCACACCACCTGCCGTGGCTGCAGAAGCCCCCACCTC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053109.5 ENSMUST00000165913.2 |
||
| CDS CCA 90 bp | AGGCCTGTGGTCGGGCTCAGTCCCGCTGCTTGTGTCAGGACAGACTaGCGGCTTGAGGGCTGTGGAAGGTGGGCGCGGCTGGTTCTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: RPVVGLSPAACVRTD*RLEGCGRWARLVLG Trigger: TCCCAGAACCAGCCGCGCCCACCTTCCACAGCCCTCAAGCCGCCAGTCTGTCCTGACACAAGCAGCGGGACTGAGCCCGACCACAGGCCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053109.5 ENSMUST00000165913.2 |
||
| CDS CCA 90 bp | TCTGCAGCCACGGCAGGTGGTGTGCTCTCCAAGTGCGCAGGCCTGTaGTCGGGCTCAGTCCCGCTGCTTGTGTCAGGACAGACTGGCGGC | + |
|
Preference number: 5 (lower is better) Translates to: SAATAGGVLSKCAGL*SGSVPLLVSGQTGG Trigger: GCCGCCAGTCTGTCCTGACACAAGCAGCGGGACTGAGCCCGACCACAGGCCTGCGCACTTGGAGAGCACACCACCTGCCGTGGCTGCAGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053109.5 ENSMUST00000165913.2 |
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| CDS-3UTR CAA 90 bp | GTGTCGGCTGGTGACTCAGTCCTGGTCCCCAGCTCCCGGCAAAGCGGGGAGGGGCGGCCTCCACCCCCATaGGGTAAGTTGCCATCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: VSAGDSVLVPSSRQSGEGRPPPP*GKLPSG Trigger: ACCAGATGGCAACTTACCCAATGGGGGTGGAGGCCG...CCCCTCCCCGCTTTGCCGGGAGCTGGGGACCAGGACTGAGTCACCAGCCGACAC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000053109.5 ENSMUST00000165913.2 |
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| CDS GCA 90 bp | TGTCCCGCTGGGCCTCAAAGTGGGCCACTGCCTCAGCAACTCGGCTaGAGTCACCACCACCAGACCGCCTTTCCGACCCTAGCCCCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: CPAGPQSGPLPQQLG*SHHHQTAFPTLAPW Trigger: CCAAGGGGCTAGGGTCGGAAAGGCGGTCTGGTGGTGGTGACTGCAGCCGAGTTGCTGAGGCAGTGGCCCACTTTGAGGCCCAGCGGGACA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053109.5 ENSMUST00000165913.2 |
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| CDS CCA 90 bp | CAGACTGGCGGCTTGAGGGCTGTGGAAGGTGGGCGCGGCTGGTTCTaGGAATACTTGCTGAAGGGCCGGGGGCACCAGAGTTGGAAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: QTGGLRAVEGGRGWF*EYLLKGRGHQSWKG Trigger: GCCCTTCCAACTCTGGTGCCCCCGGCCCTTCAGCAAGTATTCCCAGAACCAGCCGCGCCCACCTTCCACAGCCCTCAAGCCGCCAGTCTG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053109.5 ENSMUST00000165913.2 |
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| CDS CCA 90 bp | CAGCAGGACCCGACCTTCATCACCGGAAGCTGCTGTAGAGAGGAGTaGAGCAGGCTGGGAGGTGGGGGCTTCTGCAGCCACGGCAGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: QQDPTFITGSCCREE*SRLGGGGFCSHGRW Trigger: CCACCTGCCGTGGCTGCAGAAGCCCCCACCTCCCAGCCTGCTCCACTCCTCTCTACAGCAGCTTCCGGTGATGAAGGTCGGGTCCTGCTG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053109.5 ENSMUST00000165913.2 |
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| CDS CCA 90 bp | GGCCGTTCCTCCTTGCGGAGACCCTTGGTAGGAGGGCTGTCCCGCTaGGCCTCAAAGTGGGCCACTGCCTCAGCAACTCGGCTGCAGTCA | + |
|
Preference number: 5 (lower is better) Translates to: GRSSLRRPLVGGLSR*ASKWATASATRLQS Trigger: TGACTGCAGCCGAGTTGCTGAGGCAGTGGCCCACTTTGAGGCCCAGCGGGACAGCCCTCCTACCAAGGGTCTCCGCAAGGAGGAACGGCC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053109.5 ENSMUST00000165913.2 |
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| CDS CCA 90 bp | GAGTCCGTGGCACGCACACCGAAAGCCTCGATGATCCCCTTGAAGTaGTGGCAGGTGCACTTGAGGGCTGCCAAGGCCCGCGTGGGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: ESVARTPKASMIPLK*WQVHLRAAKARVGR Trigger: CCTGCCCACGCGGGCCTTGGCAGCCCTCAAGTGCACCTGCCACCACTTCAAGGGGATCATCGAGGCTTTCGGTGTGCGTGCCACGGACTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053109.5 ENSMUST00000165913.2 |
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| CDS-3UTR CAA 90 bp | GTGTCGGCTGGTGACTCAGTCCTGGTCCCCAGCTCCCGGCAAAGCGGGGAGGGGAGAGGGAGGTGTCCGTaGTGCCCTCAGAATCATCGG | + |
|
Preference number: 5 (lower is better) Translates to: VSAGDSVLVPSSRQSGEGRGRCP*CPQNHR Trigger: CCGATGATTCTGAGGGCACAACGGACACCTCCCTCT...CCCCTCCCCGCTTTGCCGGGAGCTGGGGACCAGGACTGAGTCACCAGCCGACAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000053109.5 ENSMUST00000165913.2 |
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| CDS TCA 90 bp | GGTCGGGCTCAGTCCCGCTGCTTGTGTCAGGACAGACTGGCGGCTTaGGGGCTGTGGAAGGTGGGCGCGGCTGGTTCTGGGAATACTTGC | + |
|
Preference number: 5 (lower is better) Translates to: GRAQSRCLCQDRLAA*GLWKVGAAGSGNTC Trigger: GCAAGTATTCCCAGAACCAGCCGCGCCCACCTTCCACAGCCCTCAAGCCGCCAGTCTGTCCTGACACAAGCAGCGGGACTGAGCCCGACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053109.5 ENSMUST00000165913.2 |
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| CDS GCA 90 bp | ACCCTTGGTAGGAGGGCTGTCCCGCTGGGCCTCAAAGTGGGCCACTaGCTCAGCAACTCGGCTGCAGTCACCACCACCAGACCGCCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: TLGRRAVPLGLKVGH*LSNSAAVTTTRPPF Trigger: GAAAGGCGGTCTGGTGGTGGTGACTGCAGCCGAGTTGCTGAGGCAGTGGCCCACTTTGAGGCCCAGCGGGACAGCCCTCCTACCAAGGGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053109.5 ENSMUST00000165913.2 |
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| CDS CCA 90 bp | TCAGGACAGACTGGCGGCTTGAGGGCTGTGGAAGGTGGGCGCGGCTaGTTCTGGGAATACTTGCTGAAGGGCCGGGGGCACCAGAGTTGG | + |
|
Preference number: 5 (lower is better) Translates to: SGQTGGLRAVEGGRG*FWEYLLKGRGHQSW Trigger: CCAACTCTGGTGCCCCCGGCCCTTCAGCAAGTATTCCCAGAACCAGCCGCGCCCACCTTCCACAGCCCTCAAGCCGCCAGTCTGTCCTGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053109.5 ENSMUST00000165913.2 |
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| CDS CCA 90 bp | GCTGCTTGTGTCAGGACAGACTGGCGGCTTGAGGGCTGTGGAAGGTaGGCGCGGCTGGTTCTGGGAATACTTGCTGAAGGGCCGGGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: AACVRTDWRLEGCGR*ARLVLGILAEGPGA Trigger: TGCCCCCGGCCCTTCAGCAAGTATTCCCAGAACCAGCCGCGCCCACCTTCCACAGCCCTCAAGCCGCCAGTCTGTCCTGACACAAGCAGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053109.5 ENSMUST00000165913.2 |
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| CDS CCA 90 bp | CGACCTTCATCACCGGAAGCTGCTGTAGAGAGGAGTGGAGCAGGCTaGGAGGTGGGGGCTTCTGCAGCCACGGCAGGTGGTGTGCTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: RPSSPEAAVERSGAG*EVGASAATAGGVLS Trigger: GGAGAGCACACCACCTGCCGTGGCTGCAGAAGCCCCCACCTCCCAGCCTGCTCCACTCCTCTCTACAGCAGCTTCCGGTGATGAAGGTCG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053109.5 ENSMUST00000165913.2 |
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| CDS CCA 90 bp | TTGCGGAGACCCTTGGTAGGAGGGCTGTCCCGCTGGGCCTCAAAGTaGGCCACTGCCTCAGCAACTCGGCTGCAGTCACCACCACCAGAC | + |
|
Preference number: 5 (lower is better) Translates to: LRRPLVGGLSRWASK*ATASATRLQSPPPD Trigger: GTCTGGTGGTGGTGACTGCAGCCGAGTTGCTGAGGCAGTGGCCCACTTTGAGGCCCAGCGGGACAGCCCTCCTACCAAGGGTCTCCGCAA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053109.5 ENSMUST00000165913.2 |
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| CDS CCA 90 bp | ATTGGAGATTCGGAAAGCTATACGCACCTCGCCGGGCCCAGGGCCTaGCCGTTCCTCCTTGCGGAGACCCTTGGTAGGAGGGCTGTCCCG | + |
|
Preference number: 5 (lower is better) Translates to: IGDSESYTHLAGPRA*PFLLAETLGRRAVP Trigger: CGGGACAGCCCTCCTACCAAGGGTCTCCGCAAGGAGGAACGGCCAGGCCCTGGGCCCGGCGAGGTGCGTATAGCTTTCCGAATCTCCAAT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053109.5 ENSMUST00000165913.2 |
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| CDS CCA 90 bp | GGCTCAGGAGGCCCTTCTGGACCACGGGACTGCAAGAAGAAGAGCTaGCCAGGTGGGGGTGGCTCCTCAGGGCTCACTGTCAGGCACACA | + |
|
Preference number: 5 (lower is better) Translates to: GSGGPSGPRDCKKKS*PGGGGSSGLTVRHT Trigger: TGTGTGCCTGACAGTGAGCCCTGAGGAGCCACCCCCACCTGGCCAGCTCTTCTTCTTGCAGTCCCGTGGTCCAGAAGGGCCTCCTGAGCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053109.5 ENSMUST00000165913.2 |
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| CDS CCA 90 bp | GCGGCAGAGGGAGGTGTCCGTTGTGCCCTCAGAATCATCGGGGCCTaGCACTGTGCTTGGTATATCAGCTGGGGGTGGCTCAGGAGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: AAEGGVRCALRIIGA*HCAWYISWGWLRRP Trigger: GGGCCTCCTGAGCCACCCCCAGCTGATATACCAAGCACAGTGCCAGGCCCCGATGATTCTGAGGGCACAACGGACACCTCCCTCTGCCGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053109.5 ENSMUST00000165913.2 |
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| CDS CCA 90 bp | TCCGTGGCACGCACACCGAAAGCCTCGATGATCCCCTTGAAGTGGTaGCAGGTGCACTTGAGGGCTGCCAAGGCCCGCGTGGGCAGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: SVARTPKASMIPLKW*QVHLRAAKARVGRK Trigger: CTTCCTGCCCACGCGGGCCTTGGCAGCCCTCAAGTGCACCTGCCACCACTTCAAGGGGATCATCGAGGCTTTCGGTGTGCGTGCCACGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053109.5 ENSMUST00000165913.2 |
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| CDS GCA 90 bp | CGGCCTCCACCCACTCCATTGCACGGCAGTACCCAGTTGTTGTCATaGAAGCCCAGGCGACAGCCTGGTGTCTCACGATCGGCTCTGCGG | + |
|
Preference number: 5 (lower is better) Translates to: RPPPTPLHGSTQLLS*KPRRQPGVSRSALR Trigger: CCGCAGAGCCGATCGTGAGACACCAGGCTGTCGCCTGGGCTTGCATGACAACAACTGGGTACTGCCGTGCAATGGAGTGGGTGGAGGCCG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053109.5 ENSMUST00000165913.2 |
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| CDS GCA 90 bp | GGGAGGTGTCCGTTGTGCCCTCAGAATCATCGGGGCCTGGCACTGTaGTTGGTATATCAGCTGGGGGTGGCTCAGGAGGCCCTTCTGGAC | + |
|
Preference number: 5 (lower is better) Translates to: GRCPLCPQNHRGLAL*LVYQLGVAQEALLD Trigger: GTCCAGAAGGGCCTCCTGAGCCACCCCCAGCTGATATACCAAGCACAGTGCCAGGCCCCGATGATTCTGAGGGCACAACGGACACCTCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053109.5 ENSMUST00000165913.2 |
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| CDS GCA 90 bp | GCCAAGGCCCGCGTGGGCAGGAAGCTGAATATCTTGACGAGCACGTaGTCAGGCAGCAGCAGCATGTACTGCCGTGGCTCCAGAAGACGC | + |
|
Preference number: 5 (lower is better) Translates to: AKARVGRKLNILTST*SGSSSMYCRGSRRR Trigger: GCGTCTTCTGGAGCCACGGCAGTACATGCTGCTGCTGCCTGAGCACGTGCTCGTCAAGATATTCAGCTTCCTGCCCACGCGGGCCTTGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053109.5 ENSMUST00000165913.2 |
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| CDS GCA 90 bp | TGGGGTGCCAGCGGCAGAGTGACACATCACCCTTCTCGTATCTCTTaGGGCACTGCTTACAAGGGTCGTCTCGGTAGAGCGGGTCCCGGC | + |
|
Preference number: 5 (lower is better) Translates to: WGASGRVTHHPSRIS*GTAYKGRLGRAGPG Trigger: GCCGGGACCCGCTCTACCGAGACGACCCTTGTAAGCAGTGCCGCAAGAGATACGAGAAGGGTGATGTGTCACTCTGCCGCTGGCACCCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053109.5 ENSMUST00000165913.2 |
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| CDS CCA 90 bp | GCCTGGTGGGGGCTGGTGTCTCACCCTCACTGGCTTCATCAGCCCTaGCCAATAGGAACTCCACATTGCTGGGAAGGGCATCCCTGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: AWWGLVSHPHWLHQP*PIGTPHCWEGHPWR Trigger: CCTCCAGGGATGCCCTTCCCAGCAATGTGGAGTTCCTATTGGCCAGGGCTGATGAAGCCAGTGAGGGTGAGACACCAGCCCCCACCAGGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053109.5 ENSMUST00000165913.2 |
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| CDS CCA 90 bp | AGGCCCTTCTGGACCACGGGACTGCAAGAAGAAGAGCTGGCCAGGTaGGGGTGGCTCCTCAGGGCTCACTGTCAGGCACACAGTCTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: RPFWTTGLQEEELAR*GWLLRAHCQAHSLF Trigger: GAAGAGACTGTGTGCCTGACAGTGAGCCCTGAGGAGCCACCCCCACCTGGCCAGCTCTTCTTCTTGCAGTCCCGTGGTCCAGAAGGGCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053109.5 ENSMUST00000165913.2 |
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| CDS-3UTR CAA 90 bp | CTTGGTAAGCACAGCTCCAAAGACAACTGGGGGAGGCACAGAACGAAGGGCCAGTGGTGGCAGGTGCACTaGAGGGCTGCCAAGGCCCGC | + |
|
Preference number: 5 (lower is better) Translates to: LGKHSSKDNWGRHRTKGQWWQVH*RAAKAR Trigger: GCGGGCCTTGGCAGCCCTCAAGTGCACCTGCCACCA...CTGGCCCTTCGTTCTGTGCCTCCCCCAGTTGTCTTTGGAGCTGTGCTTACCAAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053109.5 ENSMUST00000165913.2 |
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| CDS CCA 90 bp | GCACGGCAGTACCCAGTTGTTGTCATGCAAGCCCAGGCGACAGCCTaGTGTCTCACGATCGGCTCTGCGGCAGCACATCCAGTAGGAACG | + |
|
Preference number: 5 (lower is better) Translates to: ARQYPVVVMQAQATA*CLTIGSAAAHPVGT Trigger: CGTTCCTACTGGATGTGCTGCCGCAGAGCCGATCGTGAGACACCAGGCTGTCGCCTGGGCTTGCATGACAACAACTGGGTACTGCCGTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053109.5 ENSMUST00000165913.2 |
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| CDS-3UTR CAA 90 bp | AGCATGCAGCGCCTTGGTAAGCACAGCTCCAAAGACAACTGGGGGAGGCACAGATGGTCTGGAGGAGCCTaGGTGGGCTCAAGGCAGCGC | + |
|
Preference number: 5 (lower is better) Translates to: SMQRLGKHSSKDNWGRHRWSGGA*VGSRQR Trigger: GCGCTGCCTTGAGCCCACCAAGGCTCCTCCAGACCA...TCTGTGCCTCCCCCAGTTGTCTTTGGAGCTGTGCTTACCAAGGCGCTGCATGCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053109.5 ENSMUST00000165913.2 |
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| CDS-3UTR CAA 90 bp | AGCATGCAGCGCCTTGGTAAGCACAGCTCCAAAGACAACTGGGGGAGGCACAGATCCTTGCGGAGACCCTaGGTAGGAGGGCTGTCCCGC | + |
|
Preference number: 5 (lower is better) Translates to: SMQRLGKHSSKDNWGRHRSLRRP*VGGLSR Trigger: GCGGGACAGCCCTCCTACCAAGGGTCTCCGCAAGGA...TCTGTGCCTCCCCCAGTTGTCTTTGGAGCTGTGCTTACCAAGGCGCTGCATGCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053109.5 ENSMUST00000165913.2 |
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| CDS-3UTR CAA 90 bp | GACAACTGGGGGAGGCACAGAACGAAGGGCCAGCTTGAGGAAAGCCTCAGGTGGGCCTCGATGATCCCCTaGAAGTGGTGGCAGGTGCAC | + |
|
Preference number: 5 (lower is better) Translates to: DNWGRHRTKGQLEESLRWASMIP*KWWQVH Trigger: GTGCACCTGCCACCACTTCAAGGGGATCATCGAGGC...CCACCTGAGGCTTTCCTCAAGCTGGCCCTTCGTTCTGTGCCTCCCCCAGTTGTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053109.5 ENSMUST00000165913.2 |
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| CDS GCA 90 bp | AGGCAGCGCCTCCTCCTCTTAGCTTTGGAGCTGTCACTGCCCCAGTaGCCTTTGACCTTCATAGAGCTGGCCCGGCTACTTCCACCACAC | + |
|
Preference number: 5 (lower is better) Translates to: RQRLLLLALELSLPQ*PLTFIELARLLPPH Trigger: GTGTGGTGGAAGTAGCCGGGCCAGCTCTATGAAGGTCAAAGGGCACTGGGGCAGTGACAGCTCCAAAGCTAAGAGGAGGAGGCGCTGCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053109.5 ENSMUST00000165913.2 |
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| CDS GCA 90 bp | CGTGTGACACATGCCGGTACAGGCGGCAGAGGGAGGTGTCCGTTGTaGCCTCAGAATCATCGGGGCCTGGCACTGTGCTTGGTATATCAG | + |
|
Preference number: 5 (lower is better) Translates to: RVTHAGTGGRGRCPL*PQNHRGLALCLVYQ Trigger: CTGATATACCAAGCACAGTGCCAGGCCCCGATGATTCTGAGGGCACAACGGACACCTCCCTCTGCCGCCTGTACCGGCATGTGTCACACG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053109.5 ENSMUST00000165913.2 |
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| CDS GCA 90 bp | AGCCTCGATGATCCCCTTGAAGTGGTGGCAGGTGCACTTGAGGGCTaGCAAGGCCCGCGTGGGCAGGAAGCTGAATATCTTGACGAGCAC | + |
|
Preference number: 5 (lower is better) Translates to: SLDDPLEVVAGALEG*QGPRGQEAEYLDEH Trigger: GTGCTCGTCAAGATATTCAGCTTCCTGCCCACGCGGGCCTTGGCAGCCCTCAAGTGCACCTGCCACCACTTCAAGGGGATCATCGAGGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053109.5 ENSMUST00000165913.2 |
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| CDS GCA 90 bp | TGTCATGCAAGCCCAGGCGACAGCCTGGTGTCTCACGATCGGCTCTaGGGCAGCACATCCAGTAGGAACGTCCGTAAGGCAGGTCATGGT | + |
|
Preference number: 5 (lower is better) Translates to: CHASPGDSLVSHDRL*GSTSSRNVRKAGHG Trigger: ACCATGACCTGCCTTACGGACGTTCCTACTGGATGTGCTGCCGCAGAGCCGATCGTGAGACACCAGGCTGTCGCCTGGGCTTGCATGACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053109.5 ENSMUST00000165913.2 |
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| CDS CCA 90 bp | CAGGACTACCAGGGTAGGCACAACCAGGCCGGCCTCCACCCCCATTaGGTAAGTTGCCATCTGGTGAATGGGGCTCTCGGACATTGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: QDYQGRHNQAGLHPH*VSCHLVNGALGHWR Trigger: TCTCCAATGTCCGAGAGCCCCATTCACCAGATGGCAACTTACCCAATGGGGGTGGAGGCCGGCCTGGTTGTGCCTACCCTGGTAGTCCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053109.5 ENSMUST00000165913.2 |
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| CDS-3UTR CAA 90 bp | CTTGGTAAGCACAGCTCCAAAGACAACTGGGGGAGGCACAGAACGAAGGGCCAGTCCTTCTCGGCCCCCTaGGTCTGGAGGAGCCTTGGT | + |
|
Preference number: 5 (lower is better) Translates to: LGKHSSKDNWGRHRTKGQSFSAP*VWRSLG Trigger: ACCAAGGCTCCTCCAGACCAAGGGGGCCGAGAAGGA...CTGGCCCTTCGTTCTGTGCCTCCCCCAGTTGTCTTTGGAGCTGTGCTTACCAAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000053109.5 ENSMUST00000165913.2 |
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| CDS GCA 90 bp | CAGGGTAGGCACAACCAGGCCGGCCTCCACCCCCATTGGGTAAGTTaGCATCTGGTGAATGGGGCTCTCGGACATTGGAGATTCGGAAAG | + |
|
Preference number: 5 (lower is better) Translates to: QGRHNQAGLHPHWVS*HLVNGALGHWRFGK Trigger: CTTTCCGAATCTCCAATGTCCGAGAGCCCCATTCACCAGATGGCAACTTACCCAATGGGGGTGGAGGCCGGCCTGGTTGTGCCTACCCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053109.5 ENSMUST00000165913.2 |
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| CDS-3UTR CAA 90 bp | TGGGGGAGGCACAGAACGAAGGGCCAGCTTGAGGAAAGCCTCAGGTGGTACCAACTCCTCCTCTTAGCTTaGGAGCTGTCACTGCCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: WGRHRTKGQLEESLRWYQLLLLA*ELSLPQ Trigger: CTGGGGCAGTGACAGCTCCAAAGCTAAGAGGAGGAG...TTGGTACCACCTGAGGCTTTCCTCAAGCTGGCCCTTCGTTCTGTGCCTCCCCCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053109.5 ENSMUST00000165913.2 |
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| CDS-3UTR CAA 90 bp | TGGGGGAGGCACAGAACGAAGGGCCAGCTTGAGGAAAGCCTCAGGTGGTACCAACCCCCATTGGGTAAGTaGCCATCTGGTGAATGGGGC | + |
|
Preference number: 5 (lower is better) Translates to: WGRHRTKGQLEESLRWYQPPLGK*PSGEWG Trigger: GCCCCATTCACCAGATGGCAACTTACCCAATGGGGG...TTGGTACCACCTGAGGCTTTCCTCAAGCTGGCCCTTCGTTCTGTGCCTCCCCCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000053109.5 ENSMUST00000165913.2 |
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| CDS-3UTR CAA 90 bp | CTCCTCTGCCACCAAGGGACTTCCCTTTCTGTCACAGGAGGACTCCCTTGCAGTCGGCCTCCACCCCCATaGGGTAAGTTGCCATCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: LLCHQGTSLSVTGGLPCSRPPPP*GKLPSG Trigger: ACCAGATGGCAACTTACCCAATGGGGGTGGAGGCCG...ACTGCAAGGGAGTCCTCCTGTGACAGAAAGGGAAGTCCCTTGGTGGCAGAGGAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053109.5 |
||
| CDS-3UTR CAA 90 bp | AGCATGCAGCGCCTTGGTAAGCACAGCTCCAAAGACAACTGGGGGAGGCACAGAGGCCTGGCACTGTGCTaGGTATATCAGCTGGGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: SMQRLGKHSSKDNWGRHRGLALC*VYQLGV Trigger: CACCCCCAGCTGATATACCAAGCACAGTGCCAGGCC...TCTGTGCCTCCCCCAGTTGTCTTTGGAGCTGTGCTTACCAAGGCGCTGCATGCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000053109.5 ENSMUST00000165913.2 |
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| CDS-3UTR CAA 90 bp | CTCCTCTGCCACCAAGGGACTTCCCTTTCTGTCACAGGAGGACTCCCTTGCAGTGCCTCGATGATCCCCTaGAAGTGGTGGCAGGTGCAC | + |
|
Preference number: 5 (lower is better) Translates to: LLCHQGTSLSVTGGLPCSASMIP*KWWQVH Trigger: GTGCACCTGCCACCACTTCAAGGGGATCATCGAGGC...ACTGCAAGGGAGTCCTCCTGTGACAGAAAGGGAAGTCCCTTGGTGGCAGAGGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053109.5 |
||
| CDS-3UTR CAA 90 bp | CGCACAAAAGGATATGAACTCAGAGATCTGCCTGCCTCTGCCTTCCAAATGCTGGGACAGACTGGCGGCTaGAGGGCTGTGGAAGGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: RTKGYELRDLPASAFQMLGQTGG*RAVEGG Trigger: CCCACCTTCCACAGCCCTCAAGCCGCCAGTCTGTCC...CAGCATTTGGAAGGCAGAGGCAGGCAGATCTCTGAGTTCATATCCTTTTGTGCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053109.5 |
||
| CDS-3UTR CAA 90 bp | CGCACAAAAGGATATGAACTCAGAGATCTGCCTGCCTCTGCCTTCCAAATGCTGTGGTCTGGAGGAGCCTaGGTGGGCTCAAGGCAGCGC | + |
|
Preference number: 5 (lower is better) Translates to: RTKGYELRDLPASAFQMLWSGGA*VGSRQR Trigger: GCGCTGCCTTGAGCCCACCAAGGCTCCTCCAGACCA...CAGCATTTGGAAGGCAGAGGCAGGCAGATCTCTGAGTTCATATCCTTTTGTGCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053109.5 |
||
| CDS-3UTR CAA 90 bp | AAACAAAAACAAGCCAGGCTCCCTAGCTGGGTGGTGGTGGCGCACGCTTTTAATTCCTTCTCGGCCCCCTaGGTCTGGAGGAGCCTTGGT | + |
|
Preference number: 5 (lower is better) Translates to: KQKQARLPSWVVVAHAFNSFSAP*VWRSLG Trigger: ACCAAGGCTCCTCCAGACCAAGGGGGCCGAGAAGGA...ATTAAAAGCGTGCGCCACCACCACCCAGCTAGGGAGCCTGGCTTGTTTTTGTTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000053109.5 |
||
| CDS-3UTR CAA 90 bp | TGGGGGAGGCACAGAACGAAGGGCCAGCTTGAGGAAAGCCTCAGGTGGTACCAAAATAGGAACTCCACATaGCTGGGAAGGGCATCCCTG | + |
|
Preference number: 5 (lower is better) Translates to: WGRHRTKGQLEESLRWYQNRNST*LGRASL Trigger: CAGGGATGCCCTTCCCAGCAATGTGGAGTTCCTATT...TTGGTACCACCTGAGGCTTTCCTCAAGCTGGCCCTTCGTTCTGTGCCTCCCCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053109.5 ENSMUST00000165913.2 |
||
| CDS-3UTR CAA 90 bp | ATACAGACACTGGGAATTGAACCTGGATCCTCTGGAAGGGTAGCCATTGCTCTTTGGTGGCAGGTGCACTaGAGGGCTGCCAAGGCCCGC | + |
|
Preference number: 5 (lower is better) Translates to: IQTLGIEPGSSGRVAIALWWQVH*RAAKAR Trigger: GCGGGCCTTGGCAGCCCTCAAGTGCACCTGCCACCA...AAGAGCAATGGCTACCCTTCCAGAGGATCCAGGTTCAATTCCCAGTGTCTGTAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053109.5 |
||
| CDS-3UTR CAA 90 bp | CTTGGTAAGCACAGCTCCAAAGACAACTGGGGGAGGCACAGAACGAAGGGCCAGCCCTTCTCGTATCTCTaGCGGCACTGCTTACAAGGG | + |
|
Preference number: 5 (lower is better) Translates to: LGKHSSKDNWGRHRTKGQPFSYL*RHCLQG Trigger: CCCTTGTAAGCAGTGCCGCAAGAGATACGAGAAGGG...CTGGCCCTTCGTTCTGTGCCTCCCCCAGTTGTCTTTGGAGCTGTGCTTACCAAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053109.5 ENSMUST00000165913.2 |
||
| CDS CCA 90 bp | ACATCCAGTAGGAACGTCCGTAAGGCAGGTCATGGTGGTAGGGTTTaGGGTGCCAGCGGCAGAGTGACACATCACCCTTCTCGTATCTCT | + |
|
Preference number: 5 (lower is better) Translates to: TSSRNVRKAGHGGRV*GASGRVTHHPSRIS Trigger: AGAGATACGAGAAGGGTGATGTGTCACTCTGCCGCTGGCACCCCAAACCCTACCACCATGACCTGCCTTACGGACGTTCCTACTGGATGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053109.5 ENSMUST00000165913.2 |
||
| CDS-3UTR CAA 90 bp | CTTGGTAAGCACAGCTCCAAAGACAACTGGGGGAGGCACAGAACGAAGGGCCAGAATAGGAACTCCACATaGCTGGGAAGGGCATCCCTG | + |
|
Preference number: 5 (lower is better) Translates to: LGKHSSKDNWGRHRTKGQNRNST*LGRASL Trigger: CAGGGATGCCCTTCCCAGCAATGTGGAGTTCCTATT...CTGGCCCTTCGTTCTGTGCCTCCCCCAGTTGTCTTTGGAGCTGTGCTTACCAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053109.5 ENSMUST00000165913.2 |
||
| CDS-3UTR CAA 90 bp | CTTGGTAAGCACAGCTCCAAAGACAACTGGGGGAGGCACAGAACGAAGGGCCAGAGGAAGCTGAATATCTaGACGAGCACGTGCTCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: LGKHSSKDNWGRHRTKGQRKLNI*TSTCSG Trigger: GCCTGAGCACGTGCTCGTCAAGATATTCAGCTTCCT...CTGGCCCTTCGTTCTGTGCCTCCCCCAGTTGTCTTTGGAGCTGTGCTTACCAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053109.5 ENSMUST00000165913.2 |
||
| CDS CCA 90 bp | AACTCCACATTGCTGGGAAGGGCATCCCTGGAGGGGCTGATAAGCTaGTACAAGTCGCAGGTGATTTTGTCTTTGGCTCGAGTCCCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: NSTLLGRASLEGLIS*YKSQVILSLARVPG Trigger: ACCTGGGACTCGAGCCAAAGACAAAATCACCTGCGACTTGTACCAGCTTATCAGCCCCTCCAGGGATGCCCTTCCCAGCAATGTGGAGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053109.5 ENSMUST00000165913.2 |
||
| CDS-3UTR CAA 90 bp | GCTACTCATACATCACACGCACAAAAGGATATGAACTCAGAGATCTGCCTGCCTTCCTTGCGGAGACCCTaGGTAGGAGGGCTGTCCCGC | + |
|
Preference number: 5 (lower is better) Translates to: ATHTSHAQKDMNSEICLPSLRRP*VGGLSR Trigger: GCGGGACAGCCCTCCTACCAAGGGTCTCCGCAAGGA...AGGCAGGCAGATCTCTGAGTTCATATCCTTTTGTGCGTGTGATGTATGAGTAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053109.5 |
||
| CDS-3UTR CAA 90 bp | GACAACTGGGGGAGGCACAGAACGAAGGGCCAGCTTGAGGAAAGCCTCAGGTGGTTTGTATTTCCAGGCTaGATAACATACCACGTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: DNWGRHRTKGQLEESLRWFVFPG*ITYHVS Trigger: GGACACGTGGTATGTTATCAAGCCTGGAAATACAAA...CCACCTGAGGCTTTCCTCAAGCTGGCCCTTCGTTCTGTGCCTCCCCCAGTTGTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053109.5 ENSMUST00000165913.2 |
||
| CDS-3UTR CAA 90 bp | CTTGGTAAGCACAGCTCCAAAGACAACTGGGGGAGGCACAGAACGAAGGGCCAGTTCTTGGTGCCATCTTaGCCAAAGAAGATGCACGCA | + |
|
Preference number: 5 (lower is better) Translates to: LGKHSSKDNWGRHRTKGQFLVPS*PKKMHA Trigger: TGCGTGCATCTTCTTTGGCAAAGATGGCACCAAGAA...CTGGCCCTTCGTTCTGTGCCTCCCCCAGTTGTCTTTGGAGCTGTGCTTACCAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053109.5 ENSMUST00000165913.2 |
||
| CDS-3UTR CAA 90 bp | CAGCGCCTTGGTAAGCACAGCTCCAAAGACAACTGGGGGAGGCACAGAACGAAGTCTTCCTTCACGTTCTaGGTGCCATCTTTGCCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: QRLGKHSSKDNWGRHRTKSSFTF*VPSLPK Trigger: CTTTGGCAAAGATGGCACCAAGAACGTGAAGGAAGA...CTTCGTTCTGTGCCTCCCCCAGTTGTCTTTGGAGCTGTGCTTACCAAGGCGCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053109.5 ENSMUST00000165913.2 |
||
| CDS-3UTR CAA 90 bp | GGGATAACAGGTTTATACCTTGCCATAGCCAGCCAGAGGTTCTCAAGCCCAACAAGAGGGAGGTGTCCGTaGTGCCCTCAGAATCATCGG | + |
|
Preference number: 5 (lower is better) Translates to: GITGLYLAIASQRFSSPTRGRCP*CPQNHR Trigger: CCGATGATTCTGAGGGCACAACGGACACCTCCCTCT...TGTTGGGCTTGAGAACCTCTGGCTGGCTATGGCAAGGTATAAACCTGTTATCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053109.5 |
||
| CDS-3UTR CAA 90 bp | GCTACTCATACATCACACGCACAAAAGGATATGAACTCAGAGATCTGCCTGCCTCTGCCCCAGTGCCCTTaGACCTTCATAGAGCTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: ATHTSHAQKDMNSEICLPLPQCP*TFIELA Trigger: GGCCAGCTCTATGAAGGTCAAAGGGCACTGGGGCAG...AGGCAGGCAGATCTCTGAGTTCATATCCTTTTGTGCGTGTGATGTATGAGTAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053109.5 |
||
| CDS-3UTR CAA 90 bp | ATACAGACACTGGGAATTGAACCTGGATCCTCTGGAAGGGTAGCCATTGCTCTTCTCCTCCTCTTAGCTTaGGAGCTGTCACTGCCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: IQTLGIEPGSSGRVAIALLLLLA*ELSLPQ Trigger: CTGGGGCAGTGACAGCTCCAAAGCTAAGAGGAGGAG...AAGAGCAATGGCTACCCTTCCAGAGGATCCAGGTTCAATTCCCAGTGTCTGTAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053109.5 |
||
| CDS-3UTR CAA 90 bp | GATTCACCCCAAACCTACTACAGTACCAACAGGGCATCATCACATCATAGTGGGCCCCCATTGGGTAAGTaGCCATCTGGTGAATGGGGC | + |
|
Preference number: 5 (lower is better) Translates to: DSPQTYYSTNRASSHHSGPPLGK*PSGEWG Trigger: GCCCCATTCACCAGATGGCAACTTACCCAATGGGGG...CCCACTATGATGTGATGATGCCCTGTTGGTACTGTAGTAGGTTTGGGGTGAATC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000053109.5 |
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| CDS-3UTR CAA 90 bp | GCTACTCATACATCACACGCACAAAAGGATATGAACTCAGAGATCTGCCTGCCTGGCCTGGCACTGTGCTaGGTATATCAGCTGGGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: ATHTSHAQKDMNSEICLPGLALC*VYQLGV Trigger: CACCCCCAGCTGATATACCAAGCACAGTGCCAGGCC...AGGCAGGCAGATCTCTGAGTTCATATCCTTTTGTGCGTGTGATGTATGAGTAGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053109.5 |
||
| CDS-3UTR CAA 90 bp | GCTACTCATACATCACACGCACAAAAGGATATGAACTCAGAGATCTGCCTGCCTAGGAAGCTGAATATCTaGACGAGCACGTGCTCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: ATHTSHAQKDMNSEICLPRKLNI*TSTCSG Trigger: GCCTGAGCACGTGCTCGTCAAGATATTCAGCTTCCT...AGGCAGGCAGATCTCTGAGTTCATATCCTTTTGTGCGTGTGATGTATGAGTAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053109.5 |
||
| CDS GCA 90 bp | CAGTCTCTTCCTTCACGTTCTTGGTGCCATCTTTGCCAAAGAAGATaGACGCATCCACTACACCTGTTACCACCACATCTACATGGAATC | + |
|
Preference number: 5 (lower is better) Translates to: QSLPSRSWCHLCQRR*THPLHLLPPHLHGI Trigger: GATTCCATGTAGATGTGGTGGTAACAGGTGTAGTGGATGCGTGCATCTTCTTTGGCAAAGATGGCACCAAGAACGTGAAGGAAGAGACTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053109.5 ENSMUST00000165913.2 |
||
| CDS-3UTR CAA 90 bp | GATTCACCCCAAACCTACTACAGTACCAACAGGGCATCATCACATCATAGTGGGTCTTCCTTCACGTTCTaGGTGCCATCTTTGCCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: DSPQTYYSTNRASSHHSGSSFTF*VPSLPK Trigger: CTTTGGCAAAGATGGCACCAAGAACGTGAAGGAAGA...CCCACTATGATGTGATGATGCCCTGTTGGTACTGTAGTAGGTTTGGGGTGAATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053109.5 |
||
| CDS-3UTR CAA 90 bp | CATCACACACGCCAGGCTGGGCACAGCGTTATAAATATTGATTTTATAGAAACGCCCTTCTCGTATCTCTaGCGGCACTGCTTACAAGGG | + |
|
Preference number: 5 (lower is better) Translates to: HHTRQAGHSVINIDFIETPFSYL*RHCLQG Trigger: CCCTTGTAAGCAGTGCCGCAAGAGATACGAGAAGGG...CGTTTCTATAAAATCAATATTTATAACGCTGTGCCCAGCCTGGCGTGTGTGATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053109.5 |
||
| CDS-3UTR CAA 90 bp | GCCAGTTTGGTGAATGCACAGTTGCTTAGGAAACACACTCCAGGAAAACCACAGTTTGTATTTCCAGGCTaGATAACATACCACGTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: ASLVNAQLLRKHTPGKPQFVFPG*ITYHVS Trigger: GGACACGTGGTATGTTATCAAGCCTGGAAATACAAA...CTGTGGTTTTCCTGGAGTGTGTTTCCTAAGCAACTGTGCATTCACCAAACTGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053109.5 |
||
| CDS-3UTR CAA 90 bp | CATCACACACGCCAGGCTGGGCACAGCGTTATAAATATTGATTTTATAGAAACGTTCTTGGTGCCATCTTaGCCAAAGAAGATGCACGCA | + |
|
Preference number: 5 (lower is better) Translates to: HHTRQAGHSVINIDFIETFLVPS*PKKMHA Trigger: TGCGTGCATCTTCTTTGGCAAAGATGGCACCAAGAA...CGTTTCTATAAAATCAATATTTATAACGCTGTGCCCAGCCTGGCGTGTGTGATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053109.5 |
||
| CDS CAA 72 bp | CGCACCTCGCCGGGCCCAGGGCCTGGCCGTTCCTCCTaGCGGAGACCCTTGGTAGGAGGGCTGTCCCGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: RTSPGPGPGRSS*RRPLVGGLSRW Trigger: CCAGCGGGACAGCCCTCCTACCAAGGGTCTCCGCAAGGAGGAACGGCCAGGCCCTGGGCCCGGCGAGGTGCG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053109.5 ENSMUST00000165913.2 |
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| CDS CAA 90 bp | ACCTCGCCGGGCCCAGGGCCTGGCCGTTCCTCCTTGCGGAGACCCTaGGTAGGAGGGCTGTCCCGCTGGGCCTCAAAGTGGGCCACTGCC | + |
|
Preference number: 6 (lower is better) Translates to: TSPGPGPGRSSLRRP*VGGLSRWASKWATA Trigger: GGCAGTGGCCCACTTTGAGGCCCAGCGGGACAGCCCTCCTACCAAGGGTCTCCGCAAGGAGGAACGGCCAGGCCCTGGGCCCGGCGAGGT 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053109.5 ENSMUST00000165913.2 |
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| CDS CCA 72 bp | AGGCTGGGAGGTGGGGGCTTCTGCAGCCACGGCAGGTaGTGTGCTCTCCAAGTGCGCAGGCCTGTGGTCGGG | + |
|
Preference number: 6 (lower is better) Translates to: RLGGGGFCSHGR*CALQVRRPVVG Trigger: CCCGACCACAGGCCTGCGCACTTGGAGAGCACACCACCTGCCGTGGCTGCAGAAGCCCCCACCTCCCAGCCT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053109.5 ENSMUST00000165913.2 |
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| CDS CAA 90 bp | AAAGCTATACGCACCTCGCCGGGCCCAGGGCCTGGCCGTTCCTCCTaGCGGAGACCCTTGGTAGGAGGGCTGTCCCGCTGGGCCTCAAAG | + |
|
Preference number: 6 (lower is better) Translates to: KAIRTSPGPGPGRSS*RRPLVGGLSRWASK Trigger: CTTTGAGGCCCAGCGGGACAGCCCTCCTACCAAGGGTCTCCGCAAGGAGGAACGGCCAGGCCCTGGGCCCGGCGAGGTGCGTATAGCTTT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053109.5 ENSMUST00000165913.2 |
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| CDS CCA 72 bp | CTCAGTGGCAGGGGTTCCTTCTCGGCCCCCTTGGTCTaGAGGAGCCTTGGTGGGCTCAAGGCAGCGCCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: LSGRGSFSAPLV*RSLGGLKAAPP Trigger: AGGAGGCGCTGCCTTGAGCCCACCAAGGCTCCTCCAGACCAAGGGGGCCGAGAAGGAACCCCTGCCACTGAG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053109.5 ENSMUST00000165913.2 |
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| CDS CCA 72 bp | TCGGAAAGCTATACGCACCTCGCCGGGCCCAGGGCCTaGCCGTTCCTCCTTGCGGAGACCCTTGGTAGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: SESYTHLAGPRA*PFLLAETLGRR Trigger: CCTCCTACCAAGGGTCTCCGCAAGGAGGAACGGCCAGGCCCTGGGCCCGGCGAGGTGCGTATAGCTTTCCGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053109.5 ENSMUST00000165913.2 |
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| CDS CAA 72 bp | GGTCACCTCAGTGGCAGGGGTTCCTTCTCGGCCCCCTaGGTCTGGAGGAGCCTTGGTGGGCTCAAGGCAGCG | + |
|
Preference number: 6 (lower is better) Translates to: GHLSGRGSFSAP*VWRSLGGLKAA Trigger: CGCTGCCTTGAGCCCACCAAGGCTCCTCCAGACCAAGGGGGCCGAGAAGGAACCCCTGCCACTGAGGTGACC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053109.5 ENSMUST00000165913.2 |
||
| CDS CAA 90 bp | GGCTTGAGGGCTGTGGAAGGTGGGCGCGGCTGGTTCTGGGAATACTaGCTGAAGGGCCGGGGGCACCAGAGTTGGAAGGGCAGGAGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: GLRAVEGGRGWFWEY*LKGRGHQSWKGRRL Trigger: CAGCCTCCTGCCCTTCCAACTCTGGTGCCCCCGGCCCTTCAGCAAGTATTCCCAGAACCAGCCGCGCCCACCTTCCACAGCCCTCAAGCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053109.5 ENSMUST00000165913.2 |
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| CDS GCA 72 bp | AGGAGGGCTGTCCCGCTGGGCCTCAAAGTGGGCCACTaGCTCAGCAACTCGGCTGCAGTCACCACCACCAGA | + |
|
Preference number: 6 (lower is better) Translates to: RRAVPLGLKVGH*LSNSAAVTTTR Trigger: TCTGGTGGTGGTGACTGCAGCCGAGTTGCTGAGGCAGTGGCCCACTTTGAGGCCCAGCGGGACAGCCCTCCT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053109.5 ENSMUST00000165913.2 |
||
| CDS CCA 72 bp | ACGGCAGGTGGTGTGCTCTCCAAGTGCGCAGGCCTGTaGTCGGGCTCAGTCCCGCTGCTTGTGTCAGGACAG | + |
|
Preference number: 6 (lower is better) Translates to: TAGGVLSKCAGL*SGSVPLLVSGQ Trigger: CTGTCCTGACACAAGCAGCGGGACTGAGCCCGACCACAGGCCTGCGCACTTGGAGAGCACACCACCTGCCGT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053109.5 ENSMUST00000165913.2 |
||
| CDS CCA 72 bp | CCCTTGGTAGGAGGGCTGTCCCGCTGGGCCTCAAAGTaGGCCACTGCCTCAGCAACTCGGCTGCAGTCACCA | + |
|
Preference number: 6 (lower is better) Translates to: PLVGGLSRWASK*ATASATRLQSP Trigger: TGGTGACTGCAGCCGAGTTGCTGAGGCAGTGGCCCACTTTGAGGCCCAGCGGGACAGCCCTCCTACCAAGGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053109.5 ENSMUST00000165913.2 |
||
| CDS CCA 72 bp | TCCTTGCGGAGACCCTTGGTAGGAGGGCTGTCCCGCTaGGCCTCAAAGTGGGCCACTGCCTCAGCAACTCGG | + |
|
Preference number: 6 (lower is better) Translates to: SLRRPLVGGLSR*ASKWATASATR Trigger: CCGAGTTGCTGAGGCAGTGGCCCACTTTGAGGCCCAGCGGGACAGCCCTCCTACCAAGGGTCTCCGCAAGGA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053109.5 ENSMUST00000165913.2 |
||
| CDS CCA 72 bp | GGCCCTTCTGGACCACGGGACTGCAAGAAGAAGAGCTaGCCAGGTGGGGGTGGCTCCTCAGGGCTCACTGTC | + |
|
Preference number: 6 (lower is better) Translates to: GPSGPRDCKKKS*PGGGGSSGLTV Trigger: GACAGTGAGCCCTGAGGAGCCACCCCCACCTGGCCAGCTCTTCTTCTTGCAGTCCCGTGGTCCAGAAGGGCC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053109.5 ENSMUST00000165913.2 |
||
| CDS CAA 72 bp | GCTGTGGAAGGTGGGCGCGGCTGGTTCTGGGAATACTaGCTGAAGGGCCGGGGGCACCAGAGTTGGAAGGGC | + |
|
Preference number: 6 (lower is better) Translates to: AVEGGRGWFWEY*LKGRGHQSWKG Trigger: GCCCTTCCAACTCTGGTGCCCCCGGCCCTTCAGCAAGTATTCCCAGAACCAGCCGCGCCCACCTTCCACAGC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053109.5 ENSMUST00000165913.2 |
||
| CDS CAA 72 bp | TCAGTCCCGCTGCTTGTGTCAGGACAGACTGGCGGCTaGAGGGCTGTGGAAGGTGGGCGCGGCTGGTTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: SVPLLVSGQTGG*RAVEGGRGWFW Trigger: CCAGAACCAGCCGCGCCCACCTTCCACAGCCCTCAAGCCGCCAGTCTGTCCTGACACAAGCAGCGGGACTGA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053109.5 ENSMUST00000165913.2 |
||
| CDS CAA 72 bp | GGGGTTCCTTCTCGGCCCCCTTGGTCTGGAGGAGCCTaGGTGGGCTCAAGGCAGCGCCTCCTCCTCTTAGCT | + |
|
Preference number: 6 (lower is better) Translates to: GVPSRPPWSGGA*VGSRQRLLLLA Trigger: AGCTAAGAGGAGGAGGCGCTGCCTTGAGCCCACCAAGGCTCCTCCAGACCAAGGGGGCCGAGAAGGAACCCC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053109.5 ENSMUST00000165913.2 |
||
| CDS CAA 72 bp | GCCTCGATGATCCCCTTGAAGTGGTGGCAGGTGCACTaGAGGGCTGCCAAGGCCCGCGTGGGCAGGAAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: ASMIPLKWWQVH*RAAKARVGRKL Trigger: CAGCTTCCTGCCCACGCGGGCCTTGGCAGCCCTCAAGTGCACCTGCCACCACTTCAAGGGGATCATCGAGGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053109.5 ENSMUST00000165913.2 |
||
| CDS CAA 90 bp | CAGCGAGAGTCCGTGGCACGCACACCGAAAGCCTCGATGATCCCCTaGAAGTGGTGGCAGGTGCACTTGAGGGCTGCCAAGGCCCGCGTG | + |
|
Preference number: 6 (lower is better) Translates to: QRESVARTPKASMIP*KWWQVHLRAAKARV Trigger: CACGCGGGCCTTGGCAGCCCTCAAGTGCACCTGCCACCACTTCAAGGGGATCATCGAGGCTTTCGGTGTGCGTGCCACGGACTCTCGCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053109.5 ENSMUST00000165913.2 |
||
| CDS TCA 72 bp | TGGAAGGTGGGCGCGGCTGGTTCTGGGAATACTTGCTaGAGGGCCGGGGGCACCAGAGTTGGAAGGGCAGGA | + |
|
Preference number: 6 (lower is better) Translates to: WKVGAAGSGNTC*RAGGTRVGRAG Trigger: TCCTGCCCTTCCAACTCTGGTGCCCCCGGCCCTTCAGCAAGTATTCCCAGAACCAGCCGCGCCCACCTTCCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053109.5 ENSMUST00000165913.2 |
||
| CDS GCA 72 bp | GGGCCTCAAAGTGGGCCACTGCCTCAGCAACTCGGCTaGAGTCACCACCACCAGACCGCCTTTCCGACCCTA | + |
|
Preference number: 6 (lower is better) Translates to: GPQSGPLPQQLG*SHHHQTAFPTL Trigger: TAGGGTCGGAAAGGCGGTCTGGTGGTGGTGACTGCAGCCGAGTTGCTGAGGCAGTGGCCCACTTTGAGGCCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053109.5 ENSMUST00000165913.2 |
||
| CDS GCA 72 bp | CATGCCGGTACAGGCGGCAGAGGGAGGTGTCCGTTGTaGCCTCAGAATCATCGGGGCCTGGCACTGTGCTTG | + |
|
Preference number: 6 (lower is better) Translates to: HAGTGGRGRCPL*PQNHRGLALCL Trigger: CAAGCACAGTGCCAGGCCCCGATGATTCTGAGGGCACAACGGACACCTCCCTCTGCCGCCTGTACCGGCATG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053109.5 ENSMUST00000165913.2 |
||
| CDS CCA 72 bp | GATCAGCTGACACAAAGACCACGGGAGCTGGGGTACTaGGGCGCGGATAACTCTGCAGGGCCAGGGCAGCTC | + |
|
Preference number: 6 (lower is better) Translates to: DQLTQRPRELGY*GADNSAGPGQL Trigger: GAGCTGCCCTGGCCCTGCAGAGTTATCCGCGCCCCAGTACCCCAGCTCCCGTGGTCTTTGTGTCAGCTGATC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053109.5 ENSMUST00000165913.2 |
||
| CDS CCA 72 bp | GGGGCCTGGCACTGTGCTTGGTATATCAGCTGGGGGTaGCTCAGGAGGCCCTTCTGGACCACGGGACTGCAA | + |
|
Preference number: 6 (lower is better) Translates to: GAWHCAWYISWG*LRRPFWTTGLQ Trigger: TTGCAGTCCCGTGGTCCAGAAGGGCCTCCTGAGCCACCCCCAGCTGATATACCAAGCACAGTGCCAGGCCCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053109.5 ENSMUST00000165913.2 |
||
| CDS CCA 72 bp | CGCACACCGAAAGCCTCGATGATCCCCTTGAAGTGGTaGCAGGTGCACTTGAGGGCTGCCAAGGCCCGCGTG | + |
|
Preference number: 6 (lower is better) Translates to: RTPKASMIPLKW*QVHLRAAKARV Trigger: CACGCGGGCCTTGGCAGCCCTCAAGTGCACCTGCCACCACTTCAAGGGGATCATCGAGGCTTTCGGTGTGCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053109.5 ENSMUST00000165913.2 |
||
| CDS CCA 72 bp | GCACGCACACCGAAAGCCTCGATGATCCCCTTGAAGTaGTGGCAGGTGCACTTGAGGGCTGCCAAGGCCCGC | + |
|
Preference number: 6 (lower is better) Translates to: ARTPKASMIPLK*WQVHLRAAKAR Trigger: GCGGGCCTTGGCAGCCCTCAAGTGCACCTGCCACCACTTCAAGGGGATCATCGAGGCTTTCGGTGTGCGTGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053109.5 ENSMUST00000165913.2 |
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| CDS CAA 72 bp | ACACATGCCGGTACAGGCGGCAGAGGGAGGTGTCCGTaGTGCCCTCAGAATCATCGGGGCCTGGCACTGTGC | + |
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Preference number: 6 (lower is better) Translates to: THAGTGGRGRCP*CPQNHRGLALC Trigger: GCACAGTGCCAGGCCCCGATGATTCTGAGGGCACAACGGACACCTCCCTCTGCCGCCTGTACCGGCATGTGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053109.5 ENSMUST00000165913.2 |
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| CDS CAA 90 bp | TGGTCGGGCTCAGTCCCGCTGCTTGTGTCAGGACAGACTGGCGGCTaGAGGGCTGTGGAAGGTGGGCGCGGCTGGTTCTGGGAATACTTG | + |
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Preference number: 6 (lower is better) Translates to: WSGSVPLLVSGQTGG*RAVEGGRGWFWEYL Trigger: CAAGTATTCCCAGAACCAGCCGCGCCCACCTTCCACAGCCCTCAAGCCGCCAGTCTGTCCTGACACAAGCAGCGGGACTGAGCCCGACCA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053109.5 ENSMUST00000165913.2 |
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| CDS CAA 90 bp | TCAGTGGCAGGGGTTCCTTCTCGGCCCCCTTGGTCTGGAGGAGCCTaGGTGGGCTCAAGGCAGCGCCTCCTCCTCTTAGCTTTGGAGCTG | + |
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Preference number: 6 (lower is better) Translates to: SVAGVPSRPPWSGGA*VGSRQRLLLLALEL Trigger: CAGCTCCAAAGCTAAGAGGAGGAGGCGCTGCCTTGAGCCCACCAAGGCTCCTCCAGACCAAGGGGGCCGAGAAGGAACCCCTGCCACTGA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053109.5 ENSMUST00000165913.2 |
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| CDS GCA 72 bp | CCGTTGTGCCCTCAGAATCATCGGGGCCTGGCACTGTaGTTGGTATATCAGCTGGGGGTGGCTCAGGAGGCC | + |
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Preference number: 6 (lower is better) Translates to: PLCPQNHRGLAL*LVYQLGVAQEA Trigger: GGCCTCCTGAGCCACCCCCAGCTGATATACCAAGCACAGTGCCAGGCCCCGATGATTCTGAGGGCACAACGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053109.5 ENSMUST00000165913.2 |
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| CDS GCA 72 bp | AGCCCAGGCGACAGCCTGGTGTCTCACGATCGGCTCTaGGGCAGCACATCCAGTAGGAACGTCCGTAAGGCA | + |
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Preference number: 6 (lower is better) Translates to: SPGDSLVSHDRL*GSTSSRNVRKA Trigger: TGCCTTACGGACGTTCCTACTGGATGTGCTGCCGCAGAGCCGATCGTGAGACACCAGGCTGTCGCCTGGGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053109.5 ENSMUST00000165913.2 |
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| CDS CCA 72 bp | GTCAGGACAGACTGGCGGCTTGAGGGCTGTGGAAGGTaGGCGCGGCTGGTTCTGGGAATACTTGCTGAAGGG | + |
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Preference number: 6 (lower is better) Translates to: VRTDWRLEGCGR*ARLVLGILAEG Trigger: CCCTTCAGCAAGTATTCCCAGAACCAGCCGCGCCCACCTTCCACAGCCCTCAAGCCGCCAGTCTGTCCTGAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053109.5 ENSMUST00000165913.2 |
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| CDS CCA 72 bp | CAGGGTAGGCACAACCAGGCCGGCCTCCACCCCCATTaGGTAAGTTGCCATCTGGTGAATGGGGCTCTCGGA | + |
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Preference number: 6 (lower is better) Translates to: QGRHNQAGLHPH*VSCHLVNGALG Trigger: TCCGAGAGCCCCATTCACCAGATGGCAACTTACCCAATGGGGGTGGAGGCCGGCCTGGTTGTGCCTACCCTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053109.5 ENSMUST00000165913.2 |
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| CDS CCA 72 bp | ATCATCGGGGCCTGGCACTGTGCTTGGTATATCAGCTaGGGGTGGCTCAGGAGGCCCTTCTGGACCACGGGA | + |
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Preference number: 6 (lower is better) Translates to: IIGAWHCAWYIS*GWLRRPFWTTG Trigger: TCCCGTGGTCCAGAAGGGCCTCCTGAGCCACCCCCAGCTGATATACCAAGCACAGTGCCAGGCCCCGATGAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053109.5 ENSMUST00000165913.2 |
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| CDS GCA 72 bp | CGCGTGGGCAGGAAGCTGAATATCTTGACGAGCACGTaGTCAGGCAGCAGCAGCATGTACTGCCGTGGCTCC | + |
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Preference number: 6 (lower is better) Translates to: RVGRKLNILTST*SGSSSMYCRGS Trigger: GGAGCCACGGCAGTACATGCTGCTGCTGCCTGAGCACGTGCTCGTCAAGATATTCAGCTTCCTGCCCACGCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053109.5 ENSMUST00000165913.2 |
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| CDS CCA 72 bp | GGAGGTGTCCGTTGTGCCCTCAGAATCATCGGGGCCTaGCACTGTGCTTGGTATATCAGCTGGGGGTGGCTC | + |
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Preference number: 6 (lower is better) Translates to: GGVRCALRIIGA*HCAWYISWGWL Trigger: GAGCCACCCCCAGCTGATATACCAAGCACAGTGCCAGGCCCCGATGATTCTGAGGGCACAACGGACACCTCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053109.5 ENSMUST00000165913.2 |
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| CDS CAA 72 bp | TCCGTGGCACGCACACCGAAAGCCTCGATGATCCCCTaGAAGTGGTGGCAGGTGCACTTGAGGGCTGCCAAG | + |
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Preference number: 6 (lower is better) Translates to: SVARTPKASMIP*KWWQVHLRAAK Trigger: CTTGGCAGCCCTCAAGTGCACCTGCCACCACTTCAAGGGGATCATCGAGGCTTTCGGTGTGCGTGCCACGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053109.5 ENSMUST00000165913.2 |
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| CDS CAA 90 bp | CGCCTCCTCCTCTTAGCTTTGGAGCTGTCACTGCCCCAGTGCCCTTaGACCTTCATAGAGCTGGCCCGGCTACTTCCACCACACTGGTGG | + |
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Preference number: 6 (lower is better) Translates to: RLLLLALELSLPQCP*TFIELARLLPPHWW Trigger: CCACCAGTGTGGTGGAAGTAGCCGGGCCAGCTCTATGAAGGTCAAAGGGCACTGGGGCAGTGACAGCTCCAAAGCTAAGAGGAGGAGGCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053109.5 ENSMUST00000165913.2 |
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| CDS GCA 72 bp | CACAACCAGGCCGGCCTCCACCCCCATTGGGTAAGTTaGCATCTGGTGAATGGGGCTCTCGGACATTGGAGA | + |
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Preference number: 6 (lower is better) Translates to: HNQAGLHPHWVS*HLVNGALGHWR Trigger: TCTCCAATGTCCGAGAGCCCCATTCACCAGATGGCAACTTACCCAATGGGGGTGGAGGCCGGCCTGGTTGTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053109.5 ENSMUST00000165913.2 |
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| CDS GCA 72 bp | CCCACTCCATTGCACGGCAGTACCCAGTTGTTGTCATaGAAGCCCAGGCGACAGCCTGGTGTCTCACGATCG | + |
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Preference number: 6 (lower is better) Translates to: PTPLHGSTQLLS*KPRRQPGVSRS Trigger: CGATCGTGAGACACCAGGCTGTCGCCTGGGCTTGCATGACAACAACTGGGTACTGCCGTGCAATGGAGTGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053109.5 ENSMUST00000165913.2 |
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| CDS CCA 72 bp | TACCCAGTTGTTGTCATGCAAGCCCAGGCGACAGCCTaGTGTCTCACGATCGGCTCTGCGGCAGCACATCCA | + |
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Preference number: 6 (lower is better) Translates to: YPVVVMQAQATA*CLTIGSAAAHP Trigger: TGGATGTGCTGCCGCAGAGCCGATCGTGAGACACCAGGCTGTCGCCTGGGCTTGCATGACAACAACTGGGTA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053109.5 ENSMUST00000165913.2 |
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| CDS CAA 90 bp | AGTCGTGTGACACATGCCGGTACAGGCGGCAGAGGGAGGTGTCCGTaGTGCCCTCAGAATCATCGGGGCCTGGCACTGTGCTTGGTATAT | + |
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Preference number: 6 (lower is better) Translates to: SRVTHAGTGGRGRCP*CPQNHRGLALCLVY Trigger: ATATACCAAGCACAGTGCCAGGCCCCGATGATTCTGAGGGCACAACGGACACCTCCCTCTGCCGCCTGTACCGGCATGTGTCACACGACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053109.5 ENSMUST00000165913.2 |
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| CDS CAA 90 bp | ACACCGAAAGCCTCGATGATCCCCTTGAAGTGGTGGCAGGTGCACTaGAGGGCTGCCAAGGCCCGCGTGGGCAGGAAGCTGAATATCTTG | + |
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Preference number: 6 (lower is better) Translates to: TPKASMIPLKWWQVH*RAAKARVGRKLNIL Trigger: CAAGATATTCAGCTTCCTGCCCACGCGGGCCTTGGCAGCCCTCAAGTGCACCTGCCACCACTTCAAGGGGATCATCGAGGCTTTCGGTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053109.5 ENSMUST00000165913.2 |
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| CDS CCA 72 bp | GGGCTGGTGTCTCACCCTCACTGGCTTCATCAGCCCTaGCCAATAGGAACTCCACATTGCTGGGAAGGGCAT | + |
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Preference number: 6 (lower is better) Translates to: GLVSHPHWLHQP*PIGTPHCWEGH Trigger: ATGCCCTTCCCAGCAATGTGGAGTTCCTATTGGCCAGGGCTGATGAAGCCAGTGAGGGTGAGACACCAGCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053109.5 ENSMUST00000165913.2 |
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| CDS CCA 72 bp | AGGAACGTCCGTAAGGCAGGTCATGGTGGTAGGGTTTaGGGTGCCAGCGGCAGAGTGACACATCACCCTTCT | + |
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Preference number: 6 (lower is better) Translates to: RNVRKAGHGGRV*GASGRVTHHPS Trigger: AGAAGGGTGATGTGTCACTCTGCCGCTGGCACCCCAAACCCTACCACCATGACCTGCCTTACGGACGTTCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053109.5 ENSMUST00000165913.2 |
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| CDS CAA 90 bp | TCACCCTCACTGGCTTCATCAGCCCTGGCCAATAGGAACTCCACATaGCTGGGAAGGGCATCCCTGGAGGGGCTGATAAGCTGGTACAAG | + |
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Preference number: 6 (lower is better) Translates to: SPSLASSALANRNST*LGRASLEGLISWYK Trigger: CTTGTACCAGCTTATCAGCCCCTCCAGGGATGCCCTTCCCAGCAATGTGGAGTTCCTATTGGCCAGGGCTGATGAAGCCAGTGAGGGTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053109.5 ENSMUST00000165913.2 |
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| CDS GCA 72 bp | CTCCTCCTCTTAGCTTTGGAGCTGTCACTGCCCCAGTaGCCTTTGACCTTCATAGAGCTGGCCCGGCTACTT | + |
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Preference number: 6 (lower is better) Translates to: LLLLALELSLPQ*PLTFIELARLL Trigger: AAGTAGCCGGGCCAGCTCTATGAAGGTCAAAGGGCACTGGGGCAGTGACAGCTCCAAAGCTAAGAGGAGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053109.5 ENSMUST00000165913.2 |
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| CDS GCA 72 bp | AGCGGCAGAGTGACACATCACCCTTCTCGTATCTCTTaGGGCACTGCTTACAAGGGTCGTCTCGGTAGAGCG | + |
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Preference number: 6 (lower is better) Translates to: SGRVTHHPSRIS*GTAYKGRLGRA Trigger: CGCTCTACCGAGACGACCCTTGTAAGCAGTGCCGCAAGAGATACGAGAAGGGTGATGTGTCACTCTGCCGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053109.5 ENSMUST00000165913.2 |
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| CDS CAA 72 bp | CTCTTAGCTTTGGAGCTGTCACTGCCCCAGTGCCCTTaGACCTTCATAGAGCTGGCCCGGCTACTTCCACCA | + |
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Preference number: 6 (lower is better) Translates to: LLALELSLPQCP*TFIELARLLPP Trigger: TGGTGGAAGTAGCCGGGCCAGCTCTATGAAGGTCAAAGGGCACTGGGGCAGTGACAGCTCCAAAGCTAAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053109.5 ENSMUST00000165913.2 |
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| CDS CCA 72 bp | ACCTTCATAGAGCTGGCCCGGCTACTTCCACCACACTaGTGGGCCACAAAGAAGGCCACCTTCTCCTTTGTA | + |
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Preference number: 6 (lower is better) Translates to: TFIELARLLPPH*WATKKATFSFV Trigger: TACAAAGGAGAAGGTGGCCTTCTTTGTGGCCCACCAGTGTGGTGGAAGTAGCCGGGCCAGCTCTATGAAGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053109.5 ENSMUST00000165913.2 |
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| CDS CCA 72 bp | TTGCTGGGAAGGGCATCCCTGGAGGGGCTGATAAGCTaGTACAAGTCGCAGGTGATTTTGTCTTTGGCTCGA | + |
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Preference number: 6 (lower is better) Translates to: LLGRASLEGLIS*YKSQVILSLAR Trigger: TCGAGCCAAAGACAAAATCACCTGCGACTTGTACCAGCTTATCAGCCCCTCCAGGGATGCCCTTCCCAGCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053109.5 ENSMUST00000165913.2 |
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| CDS CCA 72 bp | TTCATAGAGCTGGCCCGGCTACTTCCACCACACTGGTaGGCCACAAAGAAGGCCACCTTCTCCTTTGTATTT | + |
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Preference number: 6 (lower is better) Translates to: FIELARLLPPHW*ATKKATFSFVF Trigger: AAATACAAAGGAGAAGGTGGCCTTCTTTGTGGCCCACCAGTGTGGTGGAAGTAGCCGGGCCAGCTCTATGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053109.5 ENSMUST00000165913.2 |
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| CDS CCA 72 bp | CCTCCACCCCCATTGGGTAAGTTGCCATCTGGTGAATaGGGCTCTCGGACATTGGAGATTCGGAAAGCTATA | + |
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Preference number: 6 (lower is better) Translates to: PPPPLGKLPSGE*GSRTLEIRKAI Trigger: TATAGCTTTCCGAATCTCCAATGTCCGAGAGCCCCATTCACCAGATGGCAACTTACCCAATGGGGGTGGAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053109.5 ENSMUST00000165913.2 |
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| CDS CAA 90 bp | TCCTCAGGGCTCACTGTCAGGCACACAGTCTCTTCCTTCACGTTCTaGGTGCCATCTTTGCCAAAGAAGATGCACGCATCCACTACACCT | + |
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Preference number: 6 (lower is better) Translates to: SSGLTVRHTVSSFTF*VPSLPKKMHASTTP Trigger: AGGTGTAGTGGATGCGTGCATCTTCTTTGGCAAAGATGGCACCAAGAACGTGAAGGAAGAGACTGTGTGCCTGACAGTGAGCCCTGAGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053109.5 ENSMUST00000165913.2 |
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| CDS CAA 72 bp | CTCACTGTCAGGCACACAGTCTCTTCCTTCACGTTCTaGGTGCCATCTTTGCCAAAGAAGATGCACGCATCC | + |
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Preference number: 6 (lower is better) Translates to: LTVRHTVSSFTF*VPSLPKKMHAS Trigger: GGATGCGTGCATCTTCTTTGGCAAAGATGGCACCAAGAACGTGAAGGAAGAGACTGTGTGCCTGACAGTGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053109.5 ENSMUST00000165913.2 |
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| CDS GCA 72 bp | CCTTCACGTTCTTGGTGCCATCTTTGCCAAAGAAGATaGACGCATCCACTACACCTGTTACCACCACATCTA | + |
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Preference number: 6 (lower is better) Translates to: PSRSWCHLCQRR*THPLHLLPPHL Trigger: TAGATGTGGTGGTAACAGGTGTAGTGGATGCGTGCATCTTCTTTGGCAAAGATGGCACCAAGAACGTGAAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053109.5 ENSMUST00000165913.2 |
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