Pregenerated sensors for FBXO45 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000035764Ensembl transcript IDs: ENSMUST00000042732.6
Found 112 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ACTAAGAACACTCCTAACCTGGGCTCAGGCTGGCACTGTCTCAGGTaGGTGAGTAAACATTTGATGACAGCCCCAGTGGAGACTTTGAGG | + |
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Preference number: 1 (lower is better) Translates to: TKNTPNLGSGWHCLR*VSKHLMTAPVETLR Trigger: CCTCAAAGTCTCCACTGGGGCTGTCATCAAATGTTTACTCACCCACCTGAGACAGTGCCAGCCTGAGCCCAGGTTAGGAGTGTTCTTAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042732.6 |
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| 3UTR GCA 90 bp | AGACGCTGTGGCAACATGCATATGTCAACTGCCCACTCAACCAACTaGAACCCTGAGGATTTTCTGGCCCAGTGGAAAGAGGAAACGCTA | + |
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Preference number: 1 (lower is better) Translates to: RRCGNMHMSTAHSTN*NPEDFLAQWKEETL Trigger: TAGCGTTTCCTCTTTCCACTGGGCCAGAAAATCCTCAGGGTTGCAGTTGGTTGAGTGGGCAGTTGACATATGCATGTTGCCACAGCGTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042732.6 |
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| 3UTR GCA 90 bp | GGCCCAGTGGAAAGAGGAAACGCTATGATCACTCTGTGGCAGAGCTaGTTCTCCAGTTCTCAACTTCACGTGTCTTCAGGATGTTTCTTG | + |
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Preference number: 1 (lower is better) Translates to: GPVERGNAMITLWQS*FSSSQLHVSSGCFL Trigger: CAAGAAACATCCTGAAGACACGTGAAGTTGAGAACTGGAGAAGCAGCTCTGCCACAGAGTGATCATAGCGTTTCCTCTTTCCACTGGGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042732.6 |
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| 3UTR GCA 90 bp | TTAGTGAGAAGGTTACGGGTCAGAATAGGAGCTGACGTTCACTCTTaGCAAGGAAGCTTTCATGGTGCTGCCAACCTGAAGGTTTCAGCC | + |
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Preference number: 1 (lower is better) Translates to: LVRRLRVRIGADVHS*QGSFHGAANLKVSA Trigger: GGCTGAAACCTTCAGGTTGGCAGCACCATGAAAGCTTCCTTGGCAAGAGTGAACGTCAGCTCCTATTCTGACCCGTAACCTTCTCACTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042732.6 |
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| 3UTR CCA 90 bp | ATATGTCAACTGCCCACTCAACCAACTGCAACCCTGAGGATTTTCTaGCCCAGTGGAAAGAGGAAACGCTATGATCACTCTGTGGCAGAG | + |
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Preference number: 1 (lower is better) Translates to: ICQLPTQPTATLRIF*PSGKRKRYDHSVAE Trigger: CTCTGCCACAGAGTGATCATAGCGTTTCCTCTTTCCACTGGGCCAGAAAATCCTCAGGGTTGCAGTTGGTTGAGTGGGCAGTTGACATAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042732.6 |
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| 3UTR TCA 90 bp | TGGCAACATGCATATGTCAACTGCCCACTCAACCAACTGCAACCCTaGGGATTTTCTGGCCCAGTGGAAAGAGGAAACGCTATGATCACT | + |
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Preference number: 1 (lower is better) Translates to: WQHAYVNCPLNQLQP*GFSGPVERGNAMIT Trigger: AGTGATCATAGCGTTTCCTCTTTCCACTGGGCCAGAAAATCCTCAGGGTTGCAGTTGGTTGAGTGGGCAGTTGACATATGCATGTTGCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042732.6 |
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| 3UTR GCA 90 bp | TGTAAGATGGGACCGAGCCTTCTCCATCAACACTACATAAACCCTTaGGATTCCCTCCTATGGCATCTCTACACGCTCACCTTTAAGCTG | + |
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Preference number: 1 (lower is better) Translates to: CKMGPSLLHQHYINP*DSLLWHLYTLTFKL Trigger: CAGCTTAAAGGTGAGCGTGTAGAGATGCCATAGGAGGGAATCGCAAGGGTTTATGTAGTGTTGATGGAGAAGGCTCGGTCCCATCTTACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042732.6 |
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| 3UTR CCA 90 bp | AGCCTTCTCCATCAACACTACATAAACCCTTGCGATTCCCTCCTATaGCATCTCTACACGCTCACCTTTAAGCTGGAAGTAACACACTGC | + |
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Preference number: 1 (lower is better) Translates to: SLLHQHYINPCDSLL*HLYTLTFKLEVTHC Trigger: GCAGTGTGTTACTTCCAGCTTAAAGGTGAGCGTGTAGAGATGCCATAGGAGGGAATCGCAAGGGTTTATGTAGTGTTGATGGAGAAGGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042732.6 |
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| 3UTR CCA 90 bp | GCTGCTTCTCCAGTTCTCAACTTCACGTGTCTTCAGGATGTTTCTTaGGCATGCACACATGATACTATCACTTCATGGTTCTACTTTCCA | + |
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Preference number: 1 (lower is better) Translates to: AASPVLNFTCLQDVS*ACTHDTITSWFYFP Trigger: TGGAAAGTAGAACCATGAAGTGATAGTATCATGTGTGCATGCCCAAGAAACATCCTGAAGACACGTGAAGTTGAGAACTGGAGAAGCAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042732.6 |
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| 3UTR CCA 90 bp | CTTCAGGATGTTTCTTGGGCATGCACACATGATACTATCACTTCATaGTTCTACTTTCCACAAGTAGATCTCTTCTCCACTCTTCTTCTT | + |
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Preference number: 1 (lower is better) Translates to: LQDVSWACTHDTITS*FYFPQVDLFSTLLL Trigger: AAGAAGAAGAGTGGAGAAGAGATCTACTTGTGGAAAGTAGAACCATGAAGTGATAGTATCATGTGTGCATGCCCAAGAAACATCCTGAAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042732.6 |
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| 3UTR CCA 90 bp | ATAAATACATGTAACCCTTTCAGGAGGCAACTACAGACCGTCCTGTaGCCAGTCTCCTGTTTCATAGCAGTTTTGACAAATTTAATTCTC | + |
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Preference number: 1 (lower is better) Translates to: INTCNPFRRQLQTVL*PVSCFIAVLTNLIL Trigger: GAGAATTAAATTTGTCAAAACTGCTATGAAACAGGAGACTGGCCACAGGACGGTCTGTAGTTGCCTCCTGAAAGGGTTACATGTATTTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042732.6 |
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| 3UTR-3UTR TCA 90 bp | CCTTTCAGGAGGCAACTACAGACCGTCCTGTGGCCAGTCTCCTGTTTCATAGCACCTCAGCCCATGTGTTaGGTCACTCCAGAGAGTATT | + |
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Preference number: 2 (lower is better) Translates to: PFRRQLQTVLWPVSCFIAPQPMC*VTPESI Trigger: AATACTCTCTGGAGTGACTCAACACATGGGCTGAGG...TGCTATGAAACAGGAGACTGGCCACAGGACGGTCTGTAGTTGCCTCCTGAAAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042732.6 |
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| 3UTR-3UTR GCA 90 bp | AACACTCCTAACCTGGGCTCAGGCTGGCACTGTCTCAGGTGGGTGAGTAAACATGCCCACTCAACCAACTaGAACCCTGAGGATTTTCTG | + |
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Preference number: 2 (lower is better) Translates to: NTPNLGSGWHCLRWVSKHAHSTN*NPEDFL Trigger: CAGAAAATCCTCAGGGTTGCAGTTGGTTGAGTGGGC...ATGTTTACTCACCCACCTGAGACAGTGCCAGCCTGAGCCCAGGTTAGGAGTGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042732.6 |
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| 3UTR-3UTR GCA 90 bp | AACACTCCTAACCTGGGCTCAGGCTGGCACTGTCTCAGGTGGGTGAGTAAACATCTTCTGAGTCAGCCTTaGTGGCATGTGCACAATGCT | + |
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Preference number: 2 (lower is better) Translates to: NTPNLGSGWHCLRWVSKHLLSQP*WHVHNA Trigger: AGCATTGTGCACATGCCAGCAAGGCTGACTCAGAAG...ATGTTTACTCACCCACCTGAGACAGTGCCAGCCTGAGCCCAGGTTAGGAGTGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042732.6 |
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| 3UTR-3UTR CCA 90 bp | CCTTTCAGGAGGCAACTACAGACCGTCCTGTGGCCAGTCTCCTGTTTCATAGCAACCCTGAGGATTTTCTaGCCCAGTGGAAAGAGGAAA | + |
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Preference number: 2 (lower is better) Translates to: PFRRQLQTVLWPVSCFIATLRIF*PSGKRK Trigger: TTTCCTCTTTCCACTGGGCCAGAAAATCCTCAGGGT...TGCTATGAAACAGGAGACTGGCCACAGGACGGTCTGTAGTTGCCTCCTGAAAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042732.6 |
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| 3UTR-3UTR GCA 90 bp | GCGAGTAAGGACCACCCGCACCTTTTAACTAGTCAGTCTTCATCCTTACCCAGGGCTGACGTTCACTCTTaGCAAGGAAGCTTTCATGGT | + |
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Preference number: 2 (lower is better) Translates to: ASKDHPHLLTSQSSSLPRADVHS*QGSFHG Trigger: ACCATGAAAGCTTCCTTGGCAAGAGTGAACGTCAGC...CCTGGGTAAGGATGAAGACTGACTAGTTAAAAGGTGCGGGTGGTCCTTACTCGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042732.6 |
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| 3UTR-3UTR CCA 90 bp | CCTTTCAGGAGGCAACTACAGACCGTCCTGTGGCCAGTCTCCTGTTTCATAGCACTTCAGGATGTTTCTTaGGCATGCACACATGATACT | + |
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Preference number: 2 (lower is better) Translates to: PFRRQLQTVLWPVSCFIALQDVS*ACTHDT Trigger: AGTATCATGTGTGCATGCCCAAGAAACATCCTGAAG...TGCTATGAAACAGGAGACTGGCCACAGGACGGTCTGTAGTTGCCTCCTGAAAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042732.6 |
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| 3UTR-3UTR CCA 90 bp | AACACTCCTAACCTGGGCTCAGGCTGGCACTGTCTCAGGTGGGTGAGTAAACATTTAGAGAAGACGCTGTaGCAACATGCATATGTCAAC | + |
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Preference number: 2 (lower is better) Translates to: NTPNLGSGWHCLRWVSKHLEKTL*QHAYVN Trigger: GTTGACATATGCATGTTGCCACAGCGTCTTCTCTAA...ATGTTTACTCACCCACCTGAGACAGTGCCAGCCTGAGCCCAGGTTAGGAGTGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042732.6 |
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| 3UTR CAA 90 bp | CAACTACAGACCGTCCTGTGGCCAGTCTCCTGTTTCATAGCAGTTTaGACAAATTTAATTCTCAAGGACCCCAAGAACCCCAGCGAGTCA | + |
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Preference number: 2 (lower is better) Translates to: QLQTVLWPVSCFIAV*TNLILKDPKNPSES Trigger: TGACTCGCTGGGGTTCTTGGGGTCCTTGAGAATTAAATTTGTCAAAACTGCTATGAAACAGGAGACTGGCCACAGGACGGTCTGTAGTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042732.6 |
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| 3UTR CAA 90 bp | GACCCATCCACAGTACTTTTAAGCCACTCTGAGATCTGGCCATGTTaGAACAGCACTGACTCAGGTGACTCATACTCAGCTCAGGTACAA | + |
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Preference number: 2 (lower is better) Translates to: DPSTVLLSHSEIWPC*NSTDSGDSYSAQVQ Trigger: TTGTACCTGAGCTGAGTATGAGTCACCTGAGTCAGTGCTGTTCAAACATGGCCAGATCTCAGAGTGGCTTAAAAGTACTGTGGATGGGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042732.6 |
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| 3UTR-3UTR GCA 90 bp | GCGAGTAAGGACCACCCGCACCTTTTAACTAGTCAGTCTTCATCCTTACCCAGGGATGTTTCTTGGGCATaGACACATGATACTATCACT | + |
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Preference number: 2 (lower is better) Translates to: ASKDHPHLLTSQSSSLPRDVSWA*THDTIT Trigger: AGTGATAGTATCATGTGTGCATGCCCAAGAAACATC...CCTGGGTAAGGATGAAGACTGACTAGTTAAAAGGTGCGGGTGGTCCTTACTCGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042732.6 |
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| 3UTR-3UTR CCA 90 bp | AACACTCCTAACCTGGGCTCAGGCTGGCACTGTCTCAGGTGGGTGAGTAAACATGATACTATCACTTCATaGTTCTACTTTCCACAAGTA | + |
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Preference number: 2 (lower is better) Translates to: NTPNLGSGWHCLRWVSKHDTITS*FYFPQV Trigger: TACTTGTGGAAAGTAGAACCATGAAGTGATAGTATC...ATGTTTACTCACCCACCTGAGACAGTGCCAGCCTGAGCCCAGGTTAGGAGTGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042732.6 |
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| 3UTR-3UTR GCA 90 bp | AGAACTTCCTACTTTGTAGGTGAGAAACTTCTAGGTCAAATTCGACACAACTGCGACGCTGTGGCAACATaGATATGTCAACTGCCCACT | + |
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Preference number: 2 (lower is better) Translates to: RTSYFVGEKLLGQIRHNCDAVAT*ICQLPT Trigger: AGTGGGCAGTTGACATATGCATGTTGCCACAGCGTC...GCAGTTGTGTCGAATTTGACCTAGAAGTTTCTCACCTACAAAGTAGGAAGTTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042732.6 |
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| 3UTR-3UTR CCA 90 bp | AGAACTTCCTACTTTGTAGGTGAGAAACTTCTAGGTCAAATTCGACACAACTGCCCAAGGAAGCTTTCATaGTGCTGCCAACCTGAAGGT | + |
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Preference number: 2 (lower is better) Translates to: RTSYFVGEKLLGQIRHNCPRKLS*CCQPEG Trigger: ACCTTCAGGTTGGCAGCACCATGAAAGCTTCCTTGG...GCAGTTGTGTCGAATTTGACCTAGAAGTTTCTCACCTACAAAGTAGGAAGTTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042732.6 |
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| 3UTR-3UTR TCA 90 bp | AGAACTTCCTACTTTGTAGGTGAGAAACTTCTAGGTCAAATTCGACACAACTGCAACATATCCCAGTTCTaGCACCAGGATCAGGATACG | + |
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Preference number: 2 (lower is better) Translates to: RTSYFVGEKLLGQIRHNCNISQF*HQDQDT Trigger: CGTATCCTGATCCTGGTGTCAGAACTGGGATATGTT...GCAGTTGTGTCGAATTTGACCTAGAAGTTTCTCACCTACAAAGTAGGAAGTTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042732.6 |
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| 3UTR-3UTR TCA 90 bp | AGAACTTCCTACTTTGTAGGTGAGAAACTTCTAGGTCAAATTCGACACAACTGCGAACACTCAAATCGTTaGGCTAAAATGGCTTGTTGT | + |
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Preference number: 2 (lower is better) Translates to: RTSYFVGEKLLGQIRHNCEHSNR*AKMACC Trigger: ACAACAAGCCATTTTAGCTCAACGATTTGAGTGTTC...GCAGTTGTGTCGAATTTGACCTAGAAGTTTCTCACCTACAAAGTAGGAAGTTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042732.6 |
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| 3UTR-3UTR CCA 90 bp | AGAACTTCCTACTTTGTAGGTGAGAAACTTCTAGGTCAAATTCGACACAACTGCCTTTCTAAGTCAAGCTaGCTAGAAATAAAGGGACTG | + |
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Preference number: 2 (lower is better) Translates to: RTSYFVGEKLLGQIRHNCLSKSS*LEIKGL Trigger: CAGTCCCTTTATTTCTAGCCAGCTTGACTTAGAAAG...GCAGTTGTGTCGAATTTGACCTAGAAGTTTCTCACCTACAAAGTAGGAAGTTCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042732.6 |
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| 3UTR TCA 72 bp | CACTCCCAGTGTTCTCTTGCGCCCTCTGCATCCCCGTaGGGCAATGAGTGGGGCAAGAACTTCCTACTTTGT | + |
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Preference number: 3 (lower is better) Translates to: HSQCSLAPSASP*GNEWGKNFLLC Trigger: ACAAAGTAGGAAGTTCTTGCCCCACTCATTGCCTCACGGGGATGCAGAGGGCGCAAGAGAACACTGGGAGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042732.6 |
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| 3UTR GCA 72 bp | CCCTGGTCACGGTGGCTGCAGCTGGAATGTGACAGATaGTACACTTCTGCACCATTGTTCATCCATACCGCC | + |
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Preference number: 3 (lower is better) Translates to: PWSRWLQLECDR*YTSAPLFIHTA Trigger: GGCGGTATGGATGAACAATGGTGCAGAAGTGTAGCATCTGTCACATTCCAGCTGCAGCCACCGTGACCAGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042732.6 |
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| 3UTR-3UTR CAA 90 bp | CCTAACCTGGGCTCAGGCTGGCACTGTCTCAGGTGGGTGAGTAAACATTTGATGACTTCTGAGTCAGCCTaGCTGGCATGTGCACAATGC | + |
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Preference number: 3 (lower is better) Translates to: PNLGSGWHCLRWVSKHLMTSESA*LACAQC Trigger: GCATTGTGCACATGCCAGCAAGGCTGACTCAGAAGT...CATCAAATGTTTACTCACCCACCTGAGACAGTGCCAGCCTGAGCCCAGGTTAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042732.6 |
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| 3UTR TCA 72 bp | CACGTTTCCCTGGTCACGGTGGCTGCAGCTGGAATGTaGCAGATGCTACACTTCTGCACCATTGTTCATCCA | + |
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Preference number: 3 (lower is better) Translates to: HVSLVTVAAAGM*QMLHFCTIVHP Trigger: TGGATGAACAATGGTGCAGAAGTGTAGCATCTGTCACATTCCAGCTGCAGCCACCGTGACCAGGGAAACGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042732.6 |
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| 3UTR GCA 72 bp | GGACCGAGCCTTCTCCATCAACACTACATAAACCCTTaGGATTCCCTCCTATGGCATCTCTACACGCTCACC | + |
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Preference number: 3 (lower is better) Translates to: GPSLLHQHYINP*DSLLWHLYTLT Trigger: GGTGAGCGTGTAGAGATGCCATAGGAGGGAATCGCAAGGGTTTATGTAGTGTTGATGGAGAAGGCTCGGTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042732.6 |
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| 3UTR TCA 72 bp | GCATATGTCAACTGCCCACTCAACCAACTGCAACCCTaGGGATTTTCTGGCCCAGTGGAAAGAGGAAACGCT | + |
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Preference number: 3 (lower is better) Translates to: AYVNCPLNQLQP*GFSGPVERGNA Trigger: AGCGTTTCCTCTTTCCACTGGGCCAGAAAATCCTCAGGGTTGCAGTTGGTTGAGTGGGCAGTTGACATATGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042732.6 |
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| 3UTR GCA 72 bp | ACAAATTCAACGACACGTTTCCCTGGTCACGGTGGCTaGAGCTGGAATGTGACAGATGCTACACTTCTGCAC | + |
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Preference number: 3 (lower is better) Translates to: TNSTTRFPGHGG*SWNVTDATLLH Trigger: GTGCAGAAGTGTAGCATCTGTCACATTCCAGCTGCAGCCACCGTGACCAGGGAAACGTGTCGTTGAATTTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042732.6 |
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| 3UTR TCA 72 bp | CCAGATGCCAAGAGGCACGTTCCTATCTATCACTTCTaGGTCAGCCTTGCTGGCATGTGCACAATGCTAAGT | + |
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Preference number: 3 (lower is better) Translates to: PDAKRHVPIYHF*VSLAGMCTMLS Trigger: ACTTAGCATTGTGCACATGCCAGCAAGGCTGACTCAGAAGTGATAGATAGGAACGTGCCTCTTGGCATCTGG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042732.6 |
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| 3UTR CCA 72 bp | TGTAACCCTTTCAGGAGGCAACTACAGACCGTCCTGTaGCCAGTCTCCTGTTTCATAGCAGTTTTGACAAAT | + |
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Preference number: 3 (lower is better) Translates to: CNPFRRQLQTVL*PVSCFIAVLTN Trigger: ATTTGTCAAAACTGCTATGAAACAGGAGACTGGCCACAGGACGGTCTGTAGTTGCCTCCTGAAAGGGTTACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042732.6 |
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| 3UTR TCA 72 bp | ACTAACAGCGCTCACACTGAGTTCTGTAAGATCAGCTaGGACTGTTCTGTGTGGAGACCAGTTTTCTCAGAA | + |
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Preference number: 3 (lower is better) Translates to: TNSAHTEFCKIS*DCSVWRPVFSE Trigger: TTCTGAGAAAACTGGTCTCCACACAGAACAGTCTCAGCTGATCTTACAGAACTCAGTGTGAGCGCTGTTAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042732.6 |
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| 3UTR TCA 72 bp | GGCAATGAGTGGGGCAAGAACTTCCTACTTTGTAGGTaGGAAACTTCTAGGTCAAATTCGACACAACTGCTC | + |
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Preference number: 3 (lower is better) Translates to: GNEWGKNFLLCR*ETSRSNSTQLL Trigger: GAGCAGTTGTGTCGAATTTGACCTAGAAGTTTCTCACCTACAAAGTAGGAAGTTCTTGCCCCACTCATTGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042732.6 |
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| 3UTR-3UTR CAA 90 bp | ATGAGTGGGGCAAGAACTTCCTACTTTGTAGGTGAGAAACTTCTAGGTCAAATTGAGATCTGGCCATGTTaGAACAGCACTGACTCAGGT | + |
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Preference number: 3 (lower is better) Translates to: MSGARTSYFVGEKLLGQIEIWPC*NSTDSG Trigger: ACCTGAGTCAGTGCTGTTCAAACATGGCCAGATCTC...AATTTGACCTAGAAGTTTCTCACCTACAAAGTAGGAAGTTCTTGCCCCACTCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042732.6 |
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| 3UTR TCA 72 bp | CACGTGTCTTCAGGATGTTTCTTGGGCATGCACACATaGTACTATCACTTCATGGTTCTACTTTCCACAAGT | + |
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Preference number: 3 (lower is better) Translates to: HVSSGCFLGMHT*YYHFMVLLSTS Trigger: ACTTGTGGAAAGTAGAACCATGAAGTGATAGTATCATGTGTGCATGCCCAAGAAACATCCTGAAGACACGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042732.6 |
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| 3UTR TCA 72 bp | ATTCGACACAACTGCTCTCAACCTTTGGTAGCATTCTaGAACCAGGGCATTTTTAAATCCTTATGGTCGGAA | + |
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Preference number: 3 (lower is better) Translates to: IRHNCSQPLVAF*NQGIFKSLWSE Trigger: TTCCGACCATAAGGATTTAAAAATGCCCTGGTTTCAGAATGCTACCAAAGGTTGAGAGCAGTTGTGTCGAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042732.6 |
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| 3UTR CCA 72 bp | GTTTCTTGGGCATGCACACATGATACTATCACTTCATaGTTCTACTTTCCACAAGTAGATCTCTTCTCCACT | + |
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Preference number: 3 (lower is better) Translates to: VSWACTHDTITS*FYFPQVDLFST Trigger: AGTGGAGAAGAGATCTACTTGTGGAAAGTAGAACCATGAAGTGATAGTATCATGTGTGCATGCCCAAGAAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042732.6 |
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| 3UTR-3UTR CAA 90 bp | AGAACTTCCTACTTTGTAGGTGAGAAACTTCTAGGTCAAATTCGACACAACTGCCAAACTCATGAGAACTaGAGGAACTGTAATACCCTG | + |
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Preference number: 3 (lower is better) Translates to: RTSYFVGEKLLGQIRHNCQTHEN*RNCNTL Trigger: CAGGGTATTACAGTTCCTCAAGTTCTCATGAGTTTG...GCAGTTGTGTCGAATTTGACCTAGAAGTTTCTCACCTACAAAGTAGGAAGTTCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042732.6 |
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| 3UTR TCA 72 bp | AACATTTTGTTCCACCCCTGCATGCTTCCTTATGCATaGCGTAAGAGATTCCTACAGCAACAACAAATTCAA | + |
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Preference number: 3 (lower is better) Translates to: NILFHPCMLPYA*RKRFLQQQQIQ Trigger: TTGAATTTGTTGTTGCTGTAGGAATCTCTTACGTCATGCATAAGGAAGCATGCAGGGGTGGAACAAAATGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042732.6 |
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| 3UTR CCA 72 bp | ACCTCCTTTAACACTCAGCAGTTTACCTTAATGATCTaGGCAGCCACTACTTATCTCACTAACAAGATTTCT | + |
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Preference number: 3 (lower is better) Translates to: TSFNTQQFTLMI*AATTYLTNKIS Trigger: AGAAATCTTGTTAGTGAGATAAGTAGTGGCTGCCCAGATCATTAAGGTAAACTGCTGAGTGTTAAAGGAGGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042732.6 |
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| 3UTR-3UTR CAA 90 bp | AGAACTTCCTACTTTGTAGGTGAGAAACTTCTAGGTCAAATTCGACACAACTGCCAATTTTATTTCTCATaGCTAGAGAAGTGCAGTCCA | + |
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Preference number: 3 (lower is better) Translates to: RTSYFVGEKLLGQIRHNCQFYFS*LEKCSP Trigger: TGGACTGCACTTCTCTAGCAATGAGAAATAAAATTG...GCAGTTGTGTCGAATTTGACCTAGAAGTTTCTCACCTACAAAGTAGGAAGTTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042732.6 |
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| CDS-3UTR GCA 90 bp | CCTAACCTGGGCTCAGGCTGGCACTGTCTCAGGTGGGTGAGTAAACATTTGATGCCTCTTCTGCTAGGCTaGGGGCGCACAGGCTCCGCC | + |
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Preference number: 4 (lower is better) Translates to: PNLGSGWHCLRWVSKHLMPLLLG*GRTGSA Trigger: GGCGGAGCCTGTGCGCCCGCAGCCTAGCAGAAGAGG...CATCAAATGTTTACTCACCCACCTGAGACAGTGCCAGCCTGAGCCCAGGTTAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042732.6 |
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| CDS-3UTR GCA 90 bp | CCTTTCAGGAGGCAACTACAGACCGTCCTGTGGCCAGTCTCCTGTTTCATAGCAAGCGGTACCAGTGCTTaGAAACCAGGGCGCAGCTCC | + |
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Preference number: 4 (lower is better) Translates to: PFRRQLQTVLWPVSCFIASGTSA*KPGRSS Trigger: GGAGCTGCGCCCTGGTTTGCAAGCACTGGTACCGCT...TGCTATGAAACAGGAGACTGGCCACAGGACGGTCTGTAGTTGCCTCCTGAAAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042732.6 |
||
| CDS-3UTR GCA 90 bp | AACACTCCTAACCTGGGCTCAGGCTGGCACTGTCTCAGGTGGGTGAGTAAACATAGGCAGCGGTACCAGTaGTTGCAAACCAGGGCGCAG | + |
|
Preference number: 4 (lower is better) Translates to: NTPNLGSGWHCLRWVSKHRQRYQ*LQTRAQ Trigger: CTGCGCCCTGGTTTGCAAGCACTGGTACCGCTGCCT...ATGTTTACTCACCCACCTGAGACAGTGCCAGCCTGAGCCCAGGTTAGGAGTGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042732.6 |
||
| CDS-3UTR GCA 90 bp | AGACGCTGTGGCAACATGCATATGTCAACTGCCCACTCAACCAACTGCAACCCTCAATCACTGCCACCGTaGCCAAAGGGCCCTCCCACC | + |
|
Preference number: 4 (lower is better) Translates to: RRCGNMHMSTAHSTNCNPQSLPP*PKGPPT Trigger: GGTGGGAGGGCCCTTTGGGCACGGTGGCAGTGATTG...AGGGTTGCAGTTGGTTGAGTGGGCAGTTGACATATGCATGTTGCCACAGCGTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042732.6 |
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| CDS-3UTR GCA 90 bp | AACACTCCTAACCTGGGCTCAGGCTGGCACTGTCTCAGGTGGGTGAGTAAACATTGTAGCTGGGCAGGTTaGAGAGGATGTCCGTGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: NTPNLGSGWHCLRWVSKHCSWAG*RGCPCA Trigger: TGCGCACGGACATCCTCTGCAACCTGCCCAGCTACA...ATGTTTACTCACCCACCTGAGACAGTGCCAGCCTGAGCCCAGGTTAGGAGTGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042732.6 |
||
| CDS-3UTR GCA 90 bp | CCTAACCTGGGCTCAGGCTGGCACTGTCTCAGGTGGGTGAGTAAACATTTGATGTGCAGAGGATGTCCGTaGGCAGAGCCTCTTCTGCTA | + |
|
Preference number: 4 (lower is better) Translates to: PNLGSGWHCLRWVSKHLMCRGCP*AEPLLL Trigger: TAGCAGAAGAGGCTCTGCGCACGGACATCCTCTGCA...CATCAAATGTTTACTCACCCACCTGAGACAGTGCCAGCCTGAGCCCAGGTTAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042732.6 |
||
| CDS-3UTR CCA 90 bp | ATGAGTGGGGCAAGAACTTCCTACTTTGTAGGTGAGAAACTTCTAGGTCAAATTACTCCAGCACCCGGCTaGGCAACCGGCCGCCGACCC | + |
|
Preference number: 4 (lower is better) Translates to: MSGARTSYFVGEKLLGQITPAPG*ATGRRP Trigger: GGGTCGGCGGCCGGTTGCCCAGCCGGGTGCTGGAGT...AATTTGACCTAGAAGTTTCTCACCTACAAAGTAGGAAGTTCTTGCCCCACTCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042732.6 |
||
| CDS-3UTR GCA 90 bp | CCTTTCAGGAGGCAACTACAGACCGTCCTGTGGCCAGTCTCCTGTTTCATAGCAACTTTGGTGCGTTGTTaGACTGTGGGAAGCTGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: PFRRQLQTVLWPVSCFIATLVRC*TVGSCR Trigger: ACGGCAGCTTCCCACAGTGCAACAACGCACCAAAGT...TGCTATGAAACAGGAGACTGGCCACAGGACGGTCTGTAGTTGCCTCCTGAAAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042732.6 |
||
| 3UTR CAA 72 bp | GGGACCGAGCCTTCTCCATCAACACTACATAAACCCTaGCGATTCCCTCCTATGGCATCTCTACACGCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: GTEPSPSTLHKP*RFPPMASLHAH Trigger: GTGAGCGTGTAGAGATGCCATAGGAGGGAATCGCAAGGGTTTATGTAGTGTTGATGGAGAAGGCTCGGTCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042732.6 |
||
| CDS-3UTR CCA 90 bp | CCTAACCTGGGCTCAGGCTGGCACTGTCTCAGGTGGGTGAGTAAACATTTGATGTCCTATCTGATACTTTaGTGCGTTGTTGCACTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: PNLGSGWHCLRWVSKHLMSYLIL*CVVALW Trigger: CCACAGTGCAACAACGCACCAAAGTATCAGATAGGA...CATCAAATGTTTACTCACCCACCTGAGACAGTGCCAGCCTGAGCCCAGGTTAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042732.6 |
||
| CDS-3UTR CCA 90 bp | GATACTATCACTTCATGGTTCTACTTTCCACAAGTAGATCTCTTCTCCACTCTTCTGTTCTCGTCGCCGTaGAGGCAGCGGTACCAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: DTITSWFYFPQVDLFSTLLFSSP*RQRYQC Trigger: GCACTGGTACCGCTGCCTCCACGGCGACGAGAACAG...AAGAGTGGAGAAGAGATCTACTTGTGGAAAGTAGAACCATGAAGTGATAGTATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042732.6 |
||
| CDS-3UTR TCA 90 bp | ATGAGTGGGGCAAGAACTTCCTACTTTGTAGGTGAGAAACTTCTAGGTCAAATTGCACCATCAGTGCTCTaGGCGATGGGGTTCCGATGT | + |
|
Preference number: 4 (lower is better) Translates to: MSGARTSYFVGEKLLGQIAPSVL*AMGFRC Trigger: ACATCGGAACCCCATCGCTCAGAGCACTGATGGTGC...AATTTGACCTAGAAGTTTCTCACCTACAAAGTAGGAAGTTCTTGCCCCACTCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042732.6 |
||
| CDS-3UTR TCA 90 bp | ATGAGTGGGGCAAGAACTTCCTACTTTGTAGGTGAGAAACTTCTAGGTCAAATTCGTGGCGGCCCTCACTaGAACCAATCTTGGTCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: MSGARTSYFVGEKLLGQIRGGPH*NQSWSL Trigger: CAAGGACCAAGATTGGTTTCAGTGAGGGCCGCCACG...AATTTGACCTAGAAGTTTCTCACCTACAAAGTAGGAAGTTCTTGCCCCACTCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042732.6 |
||
| CDS-3UTR GCA 90 bp | AGACGCTGTGGCAACATGCATATGTCAACTGCCCACTCAACCAACTGCAACCCTTATCTGATACTTTGGTaGGTTGTTGCACTGTGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: RRCGNMHMSTAHSTNCNPYLILW*VVALWE Trigger: TTCCCACAGTGCAACAACGCACCAAAGTATCAGATA...AGGGTTGCAGTTGGTTGAGTGGGCAGTTGACATATGCATGTTGCCACAGCGTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042732.6 |
||
| CDS-3UTR CCA 90 bp | GATACTATCACTTCATGGTTCTACTTTCCACAAGTAGATCTCTTCTCCACTCTTCACACTTCCCAGGCGTaGCGGCCCTCACTGAAACCA | + |
|
Preference number: 4 (lower is better) Translates to: DTITSWFYFPQVDLFSTLHTSQA*RPSLKP Trigger: TGGTTTCAGTGAGGGCCGCCACGCCTGGGAAGTGTG...AAGAGTGGAGAAGAGATCTACTTGTGGAAAGTAGAACCATGAAGTGATAGTATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042732.6 |
||
| CDS-3UTR GCA 90 bp | AGAACTTCCTACTTTGTAGGTGAGAAACTTCTAGGTCAAATTCGACACAACTGCTCCTTGCACCATCAGTaGTCTGAGCGATGGGGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: RTSYFVGEKLLGQIRHNCSLHHQ*SERWGS Trigger: GGAACCCCATCGCTCAGAGCACTGATGGTGCAAGGA...GCAGTTGTGTCGAATTTGACCTAGAAGTTTCTCACCTACAAAGTAGGAAGTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042732.6 |
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| CDS-3UTR CCA 90 bp | AGAACTTCCTACTTTGTAGGTGAGAAACTTCTAGGTCAAATTCGACACAACTGCGTGCTGAAGGCATGTTaGAAAGCACGCACCTTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: RTSYFVGEKLLGQIRHNCVLKAC*KARTLA Trigger: GGCCAAGGTGCGTGCTTTCCAACATGCCTTCAGCAC...GCAGTTGTGTCGAATTTGACCTAGAAGTTTCTCACCTACAAAGTAGGAAGTTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042732.6 |
||
| CDS-3UTR GCA 90 bp | GAAATAAAGGGACTGGAGAAAGAACAGGCAGTTGTAAGATGGGACCGAGCCTTCAAGTCACTTCTGTGTTaGCATATACTGCAGAGACAG | + |
|
Preference number: 4 (lower is better) Translates to: EIKGLEKEQAVVRWDRAFKSLLC*HILQRQ Trigger: CTGTCTCTGCAGTATATGGCAACACAGAAGTGACTT...GAAGGCTCGGTCCCATCTTACAACTGCCTGTTCTTTCTCCAGTCCCTTTATTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042732.6 |
||
| CDS-3UTR CCA 90 bp | GATACTATCACTTCATGGTTCTACTTTCCACAAGTAGATCTCTTCTCCACTCTTCCTTGGCCTTGTAGCTaGGCAGGTTGCAGAGGATGT | + |
|
Preference number: 4 (lower is better) Translates to: DTITSWFYFPQVDLFSTLPWPCS*AGCRGC Trigger: ACATCCTCTGCAACCTGCCCAGCTACAAGGCCAAGG...AAGAGTGGAGAAGAGATCTACTTGTGGAAAGTAGAACCATGAAGTGATAGTATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042732.6 |
||
| 3UTR CAA 72 bp | ACAGTACTTTTAAGCCACTCTGAGATCTGGCCATGTTaGAACAGCACTGACTCAGGTGACTCATACTCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: TVLLSHSEIWPC*NSTDSGDSYSA Trigger: AGCTGAGTATGAGTCACCTGAGTCAGTGCTGTTCAAACATGGCCAGATCTCAGAGTGGCTTAAAAGTACTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042732.6 |
||
| CDS-3UTR GCA 90 bp | ATGAGTGGGGCAAGAACTTCCTACTTTGTAGGTGAGAAACTTCTAGGTCAAATTACCAATCTTGGTCCTTaGACCATCAGTGCTCTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: MSGARTSYFVGEKLLGQITNLGP*TISALS Trigger: GCTCAGAGCACTGATGGTGCAAGGACCAAGATTGGT...AATTTGACCTAGAAGTTTCTCACCTACAAAGTAGGAAGTTCTTGCCCCACTCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042732.6 |
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| CDS-3UTR CCA 90 bp | GATACTATCACTTCATGGTTCTACTTTCCACAAGTAGATCTCTTCTCCACTCTTTGCGTTGTTGCACTGTaGGAAGCTGCCGTTGACTTC | + |
|
Preference number: 4 (lower is better) Translates to: DTITSWFYFPQVDLFSTLCVVAL*EAAVDF Trigger: GAAGTCAACGGCAGCTTCCCACAGTGCAACAACGCA...AAGAGTGGAGAAGAGATCTACTTGTGGAAAGTAGAACCATGAAGTGATAGTATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042732.6 |
||
| 3UTR CAA 72 bp | ACAAAAACAGAAGTTCTGAGTCAAACTCATGAGAACTaGAGGAACTGTAATACCCTGAAGATGCAGCGAGTA | + |
|
Preference number: 4 (lower is better) Translates to: TKTEVLSQTHEN*RNCNTLKMQRV Trigger: TACTCGCTGCATCTTCAGGGTATTACAGTTCCTCAAGTTCTCATGAGTTTGACTCAGAACTTCTGTTTTTGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042732.6 |
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| 3UTR CAA 72 bp | CAAAACAAGACACAGAAAGAGTGGGTTGGTGTTAAATaGTTAGACAATTATCCGACTCTAAGTTCAATGAGG | + |
|
Preference number: 4 (lower is better) Translates to: QNKTQKEWVGVK*LDNYPTLSSMR Trigger: CCTCATTGAACTTAGAGTCGGATAATTGTCTAACAATTTAACACCAACCCACTCTTTCTGTGTCTTGTTTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042732.6 |
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| CDS CCA 90 bp | GCTCGGACAGCTCCAGGTAGGAGAACACCAACTCCAGCACCCGGCTaGGCAACCGGCCGCCGACCCCGGAGGACCCCGAGCCCGCGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: ARTAPGRRTPTPAPG*ATGRRPRRTPSPRW Trigger: CCAGCGCGGGCTCGGGGTCCTCCGGGGTCGGCGGCCGGTTGCCCAGCCGGGTGCTGGAGTTGGTGTTCTCCTACCTGGAGCTGTCCGAGC 73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042732.6 |
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| CDS CCA 90 bp | CTGCGGGCGCACAGGCTCCGCCACACCTCGCTGTTCTCGTCGCCGTaGAGGCAGCGGTACCAGTGCTTGCAAACCAGGGCGCAGCTCCGC | + |
|
Preference number: 5 (lower is better) Translates to: LRAHRLRHTSLFSSP*RQRYQCLQTRAQLR Trigger: GCGGAGCTGCGCCCTGGTTTGCAAGCACTGGTACCGCTGCCTCCACGGCGACGAGAACAGCGAGGTGTGGCGGAGCCTGTGCGCCCGCAG 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042732.6 |
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| CDS GCA 90 bp | CGCCACACCTCGCTGTTCTCGTCGCCGTGGAGGCAGCGGTACCAGTaGTTGCAAACCAGGGCGCAGCTCCGCAGCTCGGACAGCTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: RHTSLFSSPWRQRYQ*LQTRAQLRSSDSSR Trigger: CCTGGAGCTGTCCGAGCTGCGGAGCTGCGCCCTGGTTTGCAAGCACTGGTACCGCTGCCTCCACGGCGACGAGAACAGCGAGGTGTGGCG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042732.6 |
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| CDS GCA 90 bp | GCAGGTTGCAGAGGATGTCCGTGCGCAGAGCCTCTTCTGCTAGGCTaGGGGCGCACAGGCTCCGCCACACCTCGCTGTTCTCGTCGCCGT | + |
|
Preference number: 5 (lower is better) Translates to: AGCRGCPCAEPLLLG*GRTGSATPRCSRRR Trigger: ACGGCGACGAGAACAGCGAGGTGTGGCGGAGCCTGTGCGCCCGCAGCCTAGCAGAAGAGGCTCTGCGCACGGACATCCTCTGCAACCTGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042732.6 |
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| CDS GCA 90 bp | CACGCACCTTGGCCTTGTAGCTGGGCAGGTTGCAGAGGATGTCCGTaGGCAGAGCCTCTTCTGCTAGGCTGCGGGCGCACAGGCTCCGCC | + |
|
Preference number: 5 (lower is better) Translates to: HAPWPCSWAGCRGCP*AEPLLLGCGRTGSA Trigger: GGCGGAGCCTGTGCGCCCGCAGCCTAGCAGAAGAGGCTCTGCGCACGGACATCCTCTGCAACCTGCCCAGCTACAAGGCCAAGGTGCGTG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042732.6 |
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| CDS GCA 90 bp | ACACCTCGCTGTTCTCGTCGCCGTGGAGGCAGCGGTACCAGTGCTTaGAAACCAGGGCGCAGCTCCGCAGCTCGGACAGCTCCAGGTAGG | + |
|
Preference number: 5 (lower is better) Translates to: TPRCSRRRGGSGTSA*KPGRSSAARTAPGR Trigger: CCTACCTGGAGCTGTCCGAGCTGCGGAGCTGCGCCCTGGTTTGCAAGCACTGGTACCGCTGCCTCCACGGCGACGAGAACAGCGAGGTGT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042732.6 |
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| CDS GCA 90 bp | AGGCATGTTGGAAAGCACGCACCTTGGCCTTGTAGCTGGGCAGGTTaGAGAGGATGTCCGTGCGCAGAGCCTCTTCTGCTAGGCTGCGGG | + |
|
Preference number: 5 (lower is better) Translates to: RHVGKHAPWPCSWAG*RGCPCAEPLLLGCG Trigger: CCCGCAGCCTAGCAGAAGAGGCTCTGCGCACGGACATCCTCTGCAACCTGCCCAGCTACAAGGCCAAGGTGCGTGCTTTCCAACATGCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042732.6 |
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| CDS-3UTR CAA 90 bp | CCTAACCTGGGCTCAGGCTGGCACTGTCTCAGGTGGGTGAGTAAACATTTGATGCGTGCTGAAGGCATGTaGGAAAGCACGCACCTTGGC | + |
|
Preference number: 5 (lower is better) Translates to: PNLGSGWHCLRWVSKHLMRAEGM*ESTHLG Trigger: GCCAAGGTGCGTGCTTTCCAACATGCCTTCAGCACG...CATCAAATGTTTACTCACCCACCTGAGACAGTGCCAGCCTGAGCCCAGGTTAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042732.6 |
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| CDS-3UTR CAA 90 bp | GAAATAAAGGGACTGGAGAAAGAACAGGCAGTTGTAAGATGGGACCGAGCCTTCCAGCGGTACCAGTGCTaGCAAACCAGGGCGCAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: EIKGLEKEQAVVRWDRAFQRYQC*QTRAQL Trigger: GAGCTGCGCCCTGGTTTGCAAGCACTGGTACCGCTG...GAAGGCTCGGTCCCATCTTACAACTGCCTGTTCTTTCTCCAGTCCCTTTATTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042732.6 |
||
| CDS-3UTR CAA 90 bp | CCTTTCAGGAGGCAACTACAGACCGTCCTGTGGCCAGTCTCCTGTTTCATAGCATACTTTGGTGCGTTGTaGCACTGTGGGAAGCTGCCG | + |
|
Preference number: 5 (lower is better) Translates to: PFRRQLQTVLWPVSCFIAYFGAL*HCGKLP Trigger: CGGCAGCTTCCCACAGTGCAACAACGCACCAAAGTA...TGCTATGAAACAGGAGACTGGCCACAGGACGGTCTGTAGTTGCCTCCTGAAAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042732.6 |
||
| CDS-3UTR CAA 90 bp | CCTTTCAGGAGGCAACTACAGACCGTCCTGTGGCCAGTCTCCTGTTTCATAGCAAACCAATCTTGGTCCTaGCACCATCAGTGCTCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: PFRRQLQTVLWPVSCFIANQSWS*HHQCSE Trigger: CTCAGAGCACTGATGGTGCAAGGACCAAGATTGGTT...TGCTATGAAACAGGAGACTGGCCACAGGACGGTCTGTAGTTGCCTCCTGAAAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042732.6 |
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| CDS-3UTR CAA 90 bp | AACACTCCTAACCTGGGCTCAGGCTGGCACTGTCTCAGGTGGGTGAGTAAACATGGTATAAGCAGGCTTTaGGAAGTCCTCGAAAGGCAA | + |
|
Preference number: 5 (lower is better) Translates to: NTPNLGSGWHCLRWVSKHGISRL*EVLERQ Trigger: TTGCCTTTCGAGGACTTCCAAAAGCCTGCTTATACC...ATGTTTACTCACCCACCTGAGACAGTGCCAGCCTGAGCCCAGGTTAGGAGTGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042732.6 |
||
| CDS TCA 90 bp | GTCTTATCCTCCATGTCCAGGATGACTCGGATTCTCTCTCCTATCTaGTACTTTGGTGCGTTGTTGCACTGTGGGAAGCTGCCGTTGACT | + |
|
Preference number: 5 (lower is better) Translates to: VLSSMSRMTRILSPI*YFGALLHCGKLPLT Trigger: AGTCAACGGCAGCTTCCCACAGTGCAACAACGCACCAAAGTATCAGATAGGAGAGAGAATCCGAGTCATCCTGGACATGGAGGATAAGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042732.6 |
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| CDS-3UTR CAA 90 bp | GATACTATCACTTCATGGTTCTACTTTCCACAAGTAGATCTCTTCTCCACTCTTCAAGGCCACATAACCTaGGCACTGCATGGGGGCCCG | + |
|
Preference number: 5 (lower is better) Translates to: DTITSWFYFPQVDLFSTLQGHIT*ALHGGP Trigger: CGGGCCCCCATGCAGTGCCAAGGTTATGTGGCCTTG...AAGAGTGGAGAAGAGATCTACTTGTGGAAAGTAGAACCATGAAGTGATAGTATC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042732.6 |
||
| CDS-3UTR CAA 90 bp | AACACTCCTAACCTGGGCTCAGGCTGGCACTGTCTCAGGTGGGTGAGTAAACATTTATGTAGTAGATTATaGTCCACCAGATTCCAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: NTPNLGSGWHCLRWVSKHLCSRL*STRFQP Trigger: GGGCTGGAATCTGGTGGACAATAATCTACTACATAA...ATGTTTACTCACCCACCTGAGACAGTGCCAGCCTGAGCCCAGGTTAGGAGTGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042732.6 |
||
| CDS TCA 90 bp | CGGCCCTCACTGAAACCAATCTTGGTCCTTGCACCATCAGTGCTCTaGGCGATGGGGTTCCGATGTAATGTAAAACCATTCTTCTTGATA | + |
|
Preference number: 5 (lower is better) Translates to: RPSLKPILVLAPSVL*AMGFRCNVKPFFLI Trigger: TATCAAGAAGAATGGTTTTACATTACATCGGAACCCCATCGCTCAGAGCACTGATGGTGCAAGGACCAAGATTGGTTTCAGTGAGGGCCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042732.6 |
||
| CDS TCA 90 bp | CTATCTGATACTTTGGTGCGTTGTTGCACTGTGGGAAGCTGCCGTTaGCTTCCCCGTTATGTAGTAGATTATTGTCCACCAGATTCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: LSDTLVRCCTVGSCR*LPRYVVDYCPPDSS Trigger: GCTGGAATCTGGTGGACAATAATCTACTACATAACGGGGAAGTCAACGGCAGCTTCCCACAGTGCAACAACGCACCAAAGTATCAGATAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042732.6 |
||
| CDS-3UTR CAA 90 bp | GAAATAAAGGGACTGGAGAAAGAACAGGCAGTTGTAAGATGGGACCGAGCCTTCCTCCTATCTGATACTTaGGTGCGTTGTTGCACTGTG | + |
|
Preference number: 5 (lower is better) Translates to: EIKGLEKEQAVVRWDRAFLLSDT*VRCCTV Trigger: CACAGTGCAACAACGCACCAAAGTATCAGATAGGAG...GAAGGCTCGGTCCCATCTTACAACTGCCTGTTCTTTCTCCAGTCCCTTTATTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042732.6 |
||
| CDS TCA 90 bp | CATACCCACGCTCAAAAGCTAAAGTCTTATCCTCCATGTCCAGGATaGCTCGGATTCTCTCTCCTATCTGATACTTTGGTGCGTTGTTGC | + |
|
Preference number: 5 (lower is better) Translates to: HTHAQKLKSYPPCPG*LGFSLLSDTLVRCC Trigger: GCAACAACGCACCAAAGTATCAGATAGGAGAGAGAATCCGAGTCATCCTGGACATGGAGGATAAGACTTTAGCTTTTGAGCGTGGGTATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042732.6 |
||
| CDS GCA 90 bp | ATCCATCCAGAGGTTTTCCAAGATAAACCAAAGTCACTTCTGTGTTaGCATATACTGCAGAGACAGCTGGGTATAAGCAGGCTTTTGGAA | + |
|
Preference number: 5 (lower is better) Translates to: IHPEVFQDKPKSLLC*HILQRQLGISRLLE Trigger: TTCCAAAAGCCTGCTTATACCCAGCTGTCTCTGCAGTATATGGCAACACAGAAGTGACTTTGGTTTATCTTGGAAAACCTCTGGATGGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042732.6 |
||
| CDS-3UTR CAA 90 bp | ATGAGTGGGGCAAGAACTTCCTACTTTGTAGGTGAGAAACTTCTAGGTCAAATTTCACTGAAACCAATCTaGGTCCTTGCACCATCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: MSGARTSYFVGEKLLGQISLKPI*VLAPSV Trigger: CACTGATGGTGCAAGGACCAAGATTGGTTTCAGTGA...AATTTGACCTAGAAGTTTCTCACCTACAAAGTAGGAAGTTCTTGCCCCACTCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042732.6 |
||
| CDS CCA 72 bp | GCTCCAGGTAGGAGAACACCAACTCCAGCACCCGGCTaGGCAACCGGCCGCCGACCCCGGAGGACCCCGAGC | + |
|
Preference number: 6 (lower is better) Translates to: APGRRTPTPAPG*ATGRRPRRTPS Trigger: GCTCGGGGTCCTCCGGGGTCGGCGGCCGGTTGCCCAGCCGGGTGCTGGAGTTGGTGTTCTCCTACCTGGAGC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042732.6 |
||
| CDS GCA 72 bp | TCGCTGTTCTCGTCGCCGTGGAGGCAGCGGTACCAGTaGTTGCAAACCAGGGCGCAGCTCCGCAGCTCGGAC | + |
|
Preference number: 6 (lower is better) Translates to: SLFSSPWRQRYQ*LQTRAQLRSSD Trigger: GTCCGAGCTGCGGAGCTGCGCCCTGGTTTGCAAGCACTGGTACCGCTGCCTCCACGGCGACGAGAACAGCGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042732.6 |
||
| CDS CCA 72 bp | CACAGGCTCCGCCACACCTCGCTGTTCTCGTCGCCGTaGAGGCAGCGGTACCAGTGCTTGCAAACCAGGGCG | + |
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Preference number: 6 (lower is better) Translates to: HRLRHTSLFSSP*RQRYQCLQTRA Trigger: CGCCCTGGTTTGCAAGCACTGGTACCGCTGCCTCCACGGCGACGAGAACAGCGAGGTGTGGCGGAGCCTGTG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042732.6 |
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| CDS CAA 72 bp | CTGTTCTCGTCGCCGTGGAGGCAGCGGTACCAGTGCTaGCAAACCAGGGCGCAGCTCCGCAGCTCGGACAGC | + |
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Preference number: 6 (lower is better) Translates to: LFSSPWRQRYQC*QTRAQLRSSDS Trigger: GCTGTCCGAGCTGCGGAGCTGCGCCCTGGTTTGCAAGCACTGGTACCGCTGCCTCCACGGCGACGAGAACAG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042732.6 |
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| CDS GCA 72 bp | TGTTCTCGTCGCCGTGGAGGCAGCGGTACCAGTGCTTaGAAACCAGGGCGCAGCTCCGCAGCTCGGACAGCT | + |
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Preference number: 6 (lower is better) Translates to: CSRRRGGSGTSA*KPGRSSAARTA Trigger: AGCTGTCCGAGCTGCGGAGCTGCGCCCTGGTTTGCAAGCACTGGTACCGCTGCCTCCACGGCGACGAGAACA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042732.6 |
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| CDS GCA 72 bp | AGAGGATGTCCGTGCGCAGAGCCTCTTCTGCTAGGCTaGGGGCGCACAGGCTCCGCCACACCTCGCTGTTCT | + |
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Preference number: 6 (lower is better) Translates to: RGCPCAEPLLLG*GRTGSATPRCS Trigger: AGAACAGCGAGGTGTGGCGGAGCCTGTGCGCCCGCAGCCTAGCAGAAGAGGCTCTGCGCACGGACATCCTCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042732.6 |
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| CDS GCA 72 bp | TGGCCTTGTAGCTGGGCAGGTTGCAGAGGATGTCCGTaGGCAGAGCCTCTTCTGCTAGGCTGCGGGCGCACA | + |
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Preference number: 6 (lower is better) Translates to: WPCSWAGCRGCP*AEPLLLGCGRT Trigger: TGTGCGCCCGCAGCCTAGCAGAAGAGGCTCTGCGCACGGACATCCTCTGCAACCTGCCCAGCTACAAGGCCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042732.6 |
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| CDS GCA 72 bp | CTGCATGGGGGCCCGTTTCGTAGCAATCCCAATCACTaGCACCGTGCCCAAAGGGCCCTCCCACCACACTTC | + |
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Preference number: 6 (lower is better) Translates to: LHGGPFRSNPNH*HRAQRALPPHF Trigger: GAAGTGTGGTGGGAGGGCCCTTTGGGCACGGTGGCAGTGATTGGGATTGCTACGAAACGGGCCCCCATGCAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042732.6 |
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| CDS CAA 90 bp | CCAGCCCCAGCTCTGGTCGTCACTTCCCAGCAAGGCCACATAACCTaGGCACTGCATGGGGGCCCGTTTCGTAGCAATCCCAATCACTGC | + |
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Preference number: 6 (lower is better) Translates to: PAPALVVTSQQGHIT*ALHGGPFRSNPNHC Trigger: GCAGTGATTGGGATTGCTACGAAACGGGCCCCCATGCAGTGCCAAGGTTATGTGGCCTTGCTGGGAAGTGACGACCAGAGCTGGGGCTGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042732.6 |
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| CDS TCA 72 bp | CCTCCCACCACACTTCCCAGGCGTGGCGGCCCTCACTaGAACCAATCTTGGTCCTTGCACCATCAGTGCTCT | + |
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Preference number: 6 (lower is better) Translates to: PPTTLPRRGGPH*NQSWSLHHQCS Trigger: AGAGCACTGATGGTGCAAGGACCAAGATTGGTTTCAGTGAGGGCCGCCACGCCTGGGAAGTGTGGTGGGAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042732.6 |
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| CDS GCA 72 bp | GGCGTGGCGGCCCTCACTGAAACCAATCTTGGTCCTTaGACCATCAGTGCTCTGAGCGATGGGGTTCCGATG | + |
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Preference number: 6 (lower is better) Translates to: GVAALTETNLGP*TISALSDGVPM Trigger: CATCGGAACCCCATCGCTCAGAGCACTGATGGTGCAAGGACCAAGATTGGTTTCAGTGAGGGCCGCCACGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042732.6 |
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| CDS CCA 72 bp | AGGCATGTTGGAAAGCACGCACCTTGGCCTTGTAGCTaGGCAGGTTGCAGAGGATGTCCGTGCGCAGAGCCT | + |
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Preference number: 6 (lower is better) Translates to: RHVGKHAPWPCS*AGCRGCPCAEP Trigger: AGGCTCTGCGCACGGACATCCTCTGCAACCTGCCCAGCTACAAGGCCAAGGTGCGTGCTTTCCAACATGCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042732.6 |
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| CDS CAA 72 bp | GCTCTGGTCGTCACTTCCCAGCAAGGCCACATAACCTaGGCACTGCATGGGGGCCCGTTTCGTAGCAATCCC | + |
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Preference number: 6 (lower is better) Translates to: ALVVTSQQGHIT*ALHGGPFRSNP Trigger: GGGATTGCTACGAAACGGGCCCCCATGCAGTGCCAAGGTTATGTGGCCTTGCTGGGAAGTGACGACCAGAGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042732.6 |
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| CDS CAA 90 bp | CTGTGTTGCCATATACTGCAGAGACAGCTGGGTATAAGCAGGCTTTaGGAAGTCCTCGAAAGGCAACCCCCAGGAACTCATACCCACGCT | + |
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Preference number: 6 (lower is better) Translates to: LCCHILQRQLGISRL*EVLERQPPGTHTHA Trigger: AGCGTGGGTATGAGTTCCTGGGGGTTGCCTTTCGAGGACTTCCAAAAGCCTGCTTATACCCAGCTGTCTCTGCAGTATATGGCAACACAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042732.6 |
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| CDS CAA 72 bp | AAGCTGCCGTTGACTTCCCCGTTATGTAGTAGATTATaGTCCACCAGATTCCAGCCCCAGCTCTGGTCGTCA | + |
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Preference number: 6 (lower is better) Translates to: KLPLTSPLCSRL*STRFQPQLWSS Trigger: TGACGACCAGAGCTGGGGCTGGAATCTGGTGGACAATAATCTACTACATAACGGGGAAGTCAACGGCAGCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042732.6 |
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| CDS TCA 72 bp | TCCATGTCCAGGATGACTCGGATTCTCTCTCCTATCTaGTACTTTGGTGCGTTGTTGCACTGTGGGAAGCTG | + |
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Preference number: 6 (lower is better) Translates to: SMSRMTRILSPI*YFGALLHCGKL Trigger: CAGCTTCCCACAGTGCAACAACGCACCAAAGTATCAGATAGGAGAGAGAATCCGAGTCATCCTGGACATGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042732.6 |
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| CDS TCA 72 bp | ACTTTGGTGCGTTGTTGCACTGTGGGAAGCTGCCGTTaGCTTCCCCGTTATGTAGTAGATTATTGTCCACCA | + |
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Preference number: 6 (lower is better) Translates to: TLVRCCTVGSCR*LPRYVVDYCPP Trigger: TGGTGGACAATAATCTACTACATAACGGGGAAGTCAACGGCAGCTTCCCACAGTGCAACAACGCACCAAAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042732.6 |
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| CDS CAA 72 bp | TACTTTGGTGCGTTGTTGCACTGTGGGAAGCTGCCGTaGACTTCCCCGTTATGTAGTAGATTATTGTCCACC | + |
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Preference number: 6 (lower is better) Translates to: YFGALLHCGKLP*TSPLCSRLLST Trigger: GGTGGACAATAATCTACTACATAACGGGGAAGTCAACGGCAGCTTCCCACAGTGCAACAACGCACCAAAGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042732.6 |
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| CDS TCA 72 bp | CTGAAACCAATCTTGGTCCTTGCACCATCAGTGCTCTaGGCGATGGGGTTCCGATGTAATGTAAAACCATTC | + |
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Preference number: 6 (lower is better) Translates to: LKPILVLAPSVL*AMGFRCNVKPF Trigger: GAATGGTTTTACATTACATCGGAACCCCATCGCTCAGAGCACTGATGGTGCAAGGACCAAGATTGGTTTCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042732.6 |
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| CDS TCA 72 bp | GCTCAAAAGCTAAAGTCTTATCCTCCATGTCCAGGATaGCTCGGATTCTCTCTCCTATCTGATACTTTGGTG | + |
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Preference number: 6 (lower is better) Translates to: AQKLKSYPPCPG*LGFSLLSDTLV Trigger: CACCAAAGTATCAGATAGGAGAGAGAATCCGAGTCATCCTGGACATGGAGGATAAGACTTTAGCTTTTGAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042732.6 |
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| CDS GCA 72 bp | GAGGTTTTCCAAGATAAACCAAAGTCACTTCTGTGTTaGCATATACTGCAGAGACAGCTGGGTATAAGCAGG | + |
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Preference number: 6 (lower is better) Translates to: EVFQDKPKSLLC*HILQRQLGISR Trigger: CCTGCTTATACCCAGCTGTCTCTGCAGTATATGGCAACACAGAAGTGACTTTGGTTTATCTTGGAAAACCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042732.6 |
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