Pregenerated sensors for FBXO44 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029001Ensembl transcript IDs: ENSMUST00000057907.10, ENSMUST00000105705.9, ENSMUST00000122913.3, ENSMUST00000129253.8, ENSMUST00000151127.8, ENSMUST00000151246.8, ENSMUST00000153703.8, ENSMUST00000167160.8, ENSMUST00000172472.8, ENSMUST00000173352.2
Found 180 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TCCGGCTGGAAGGTTCCCAGTGGTGCGTGGGCTGACGACAGGAGTTaGACGCACAGCTGGTACTTGGACCCGCAGTCTGGCCTGGCTGCA | + |
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Preference number: 1 (lower is better) Translates to: SGWKVPSGAWADDRS*THSWYLDPQSGLAA Trigger: TGCAGCCAGGCCAGACTGCGGGTCCAAGTACCAGCTGTGCGTCCAACTCCTGTCGTCAGCCCACGCACCACTGGGAACCTTCCAGCCGGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000122913.3 ENSMUST00000172472.8 |
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| 3UTR TCA 90 bp | AATCATCACCGGGTCCGGCTGGAAGGTTCCCAGTGGTGCGTGGGCTaGCGACAGGAGTTGGACGCACAGCTGGTACTTGGACCCGCAGTC | + |
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Preference number: 1 (lower is better) Translates to: NHHRVRLEGSQWCVG*RQELDAQLVLGPAV Trigger: GACTGCGGGTCCAAGTACCAGCTGTGCGTCCAACTCCTGTCGTCAGCCCACGCACCACTGGGAACCTTCCAGCCGGACCCGGTGATGATT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000122913.3 ENSMUST00000172472.8 |
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| 3UTR TCA 90 bp | GAGAATGTGTGTGAAACCTCCCTCCACTTGGCATCGCTTTTCTGCTaGATCATCACCGGGTCCGGCTGGAAGGTTCCCAGTGGTGCGTGG | + |
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Preference number: 1 (lower is better) Translates to: ENVCETSLHLASLFC*IITGSGWKVPSGAW Trigger: CCACGCACCACTGGGAACCTTCCAGCCGGACCCGGTGATGATTCAGCAGAAAAGCGATGCCAAGTGGAGGGAGGTTTCACACACATTCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172472.8 |
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| 3UTR CCA 90 bp | CTTCAAGCCACAGAGGACTTGGCCAGGTCCTTCCACTCAAAACCCTaGTCCATCCTACCCCTCATCTGGCCTCTCATCCGGAGTCTTCTG | + |
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Preference number: 1 (lower is better) Translates to: LQATEDLARSFHSKP*SILPLIWPLIRSLL Trigger: CAGAAGACTCCGGATGAGAGGCCAGATGAGGGGTAGGATGGACCAGGGTTTTGAGTGGAAGGACCTGGCCAAGTCCTCTGTGGCTTGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000057907.10 ENSMUST00000129253.8 ENSMUST00000167160.8 |
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| 3UTR TCA 90 bp | AAACCAGATGTAGCGGACGCCGGGAGGATAGTTGGAGAATGTGTGTaGAACCCTGTAGAGCGACACACACACAGCCCTGTGTTCAGTCCC | + |
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Preference number: 1 (lower is better) Translates to: KPDVADAGRIVGECV*NPVERHTHSPVFSP Trigger: GGGACTGAACACAGGGCTGTGTGTGTGTCGCTCTACAGGGTTTCACACACATTCTCCAACTATCCTCCCGGCGTCCGCTACATCTGGTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153703.8 |
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| 3UTR TCA 90 bp | CTTCTGGGGAGTCCTGCACTCATTGGTAGGATGACAAAGATAGTCTaGTCCTGCCTATCTGGTACCAGGCCTGACTTTAAAGCCAAAGCA | + |
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Preference number: 1 (lower is better) Translates to: LLGSPALIGRMTKIV*SCLSGTRPDFKAKA Trigger: TGCTTTGGCTTTAAAGTCAGGCCTGGTACCAGATAGGCAGGATCAGACTATCTTTGTCATCCTACCAATGAGTGCAGGACTCCCCAGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057907.10 ENSMUST00000129253.8 ENSMUST00000167160.8 |
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| 3UTR CCA 90 bp | TCCCTTGGAACTGGAGTTACAGGTGGTTGTGAGCCACCATATGGGTaGTATGATTTGAACCTGGCTCCTCTGAAGGAGCCAAAGTATTAT | + |
|
Preference number: 1 (lower is better) Translates to: SLGTGVTGGCEPPYG*YDLNLAPLKEPKYY Trigger: ATAATACTTTGGCTCCTTCAGAGGAGCCAGGTTCAAATCATACCACCCATATGGTGGCTCACAACCACCTGTAACTCCAGTTCCAAGGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151127.8 |
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| 3UTR GCA 90 bp | CTCACCCATTGCTGCTTCAGTTTCCCAACACTGGGCACTTCCGGTTaGACACCTTTAGTTTATTACATGTGTATGAATATTTTGCCAGTA | + |
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Preference number: 1 (lower is better) Translates to: LTHCCFSFPTLGTSG*TPLVYYMCMNILPV Trigger: TACTGGCAAAATATTCATACACATGTAATAAACTAAAGGTGTGCAACCGGAAGTGCCCAGTGTTGGGAAACTGAAGCAGCAATGGGTGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151127.8 |
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| 3UTR-3UTR CCA 90 bp | TGTGACTCTCGGGCCGTACCAGCCGGCCCAGTAGTGAGTGTCCACGCCTCCGTGATAAACCAGGCAGGGTaGGGGTTAGAGGCAGGAGGA | + |
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Preference number: 2 (lower is better) Translates to: CDSRAVPAGPVVSVHASVINQAG*GLEAGG Trigger: TCCTCCTGCCTCTAACCCCCACCCTGCCTGGTTTAT...CACGGAGGCGTGGACACTCACTACTGGGCCGGCTGGTACGGCCCGAGAGTCACA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153703.8 |
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| 3UTR-3UTR CCA 90 bp | AGCAGAGAGCGTACAGCAGCTGACCACCAGGCTAAGGACTGGCCAGCAGAGCCTGAGGGGCAGCTTTGCTaGAGAGCTAGAGAGGAGGGT | + |
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Preference number: 2 (lower is better) Translates to: SRERTAADHQAKDWPAEPEGQLC*RAREEG Trigger: ACCCTCCTCTCTAGCTCTCCAGCAAAGCTGCCCCTC...AGGCTCTGCTGGCCAGTCCTTAGCCTGGTGGTCAGCTGCTGTACGCTCTCTGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057907.10 ENSMUST00000129253.8 ENSMUST00000167160.8 |
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| 3UTR-3UTR CCA 90 bp | TGGCATCGCTTTTCTGCTGAATCATCACCGGGTCCGGCTGGAAGGTTCCCAGTGCGCACAGCTGGTACTTaGACCCGCAGTCTGGCCTGG | + |
|
Preference number: 2 (lower is better) Translates to: WHRFSAESSPGPAGRFPVRTAGT*TRSLAW Trigger: CCAGGCCAGACTGCGGGTCCAAGTACCAGCTGTGCG...CACTGGGAACCTTCCAGCCGGACCCGGTGATGATTCAGCAGAAAAGCGATGCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000122913.3 ENSMUST00000172472.8 |
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| 3UTR-3UTR TCA 90 bp | GGGCTGGGGCATCTTCAAGCCACAGAGGACTTGGCCAGGTCCTTCCACTCAAAAGCTCTCCAGGGCCCTTaGGGAGAACAAGGAGAGAGG | + |
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Preference number: 2 (lower is better) Translates to: GLGHLQATEDLARSFHSKALQGP*GEQGER Trigger: CCTCTCTCCTTGTTCTCCTCAAGGGCCCTGGAGAGC...TTTTGAGTGGAAGGACCTGGCCAAGTCCTCTGTGGCTTGAAGATGCCCCAGCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000057907.10 ENSMUST00000129253.8 ENSMUST00000167160.8 |
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| 3UTR-3UTR GCA 90 bp | CACCGATGGGGCTGGGGCATCTTCAAGCCACAGAGGACTTGGCCAGGTCCTTCCTTAGAGGGGCAGCTTTaGTGGAGAGCTAGAGAGGAG | + |
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Preference number: 2 (lower is better) Translates to: HRWGWGIFKPQRTWPGPSLEGQL*WRAREE Trigger: CTCCTCTCTAGCTCTCCAGCAAAGCTGCCCCTCTAA...GGAAGGACCTGGCCAAGTCCTCTGTGGCTTGAAGATGCCCCAGCCCCATCGGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000057907.10 ENSMUST00000129253.8 ENSMUST00000167160.8 |
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| 3UTR-3UTR CCA 90 bp | CCCACCGATGGGGCTGGGGCATCTTCAAGCCACAGAGGACTTGGCCAGGTCCTTATCCTACCCCTCATCTaGCCTCTCATCCGGAGTCTT | + |
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Preference number: 2 (lower is better) Translates to: PTDGAGASSSHRGLGQVLILPLI*PLIRSL Trigger: AAGACTCCGGATGAGAGGCCAGATGAGGGGTAGGAT...AAGGACCTGGCCAAGTCCTCTGTGGCTTGAAGATGCCCCAGCCCCATCGGTGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000057907.10 ENSMUST00000129253.8 ENSMUST00000167160.8 |
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| 3UTR-3UTR CCA 90 bp | TGGCATCGCTTTTCTGCTGAATCATCACCGGGTCCGGCTGGAAGGTTCCCAGTGCTTGGACCCGCAGTCTaGCCTGGCTGCAAACCAGTC | + |
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Preference number: 2 (lower is better) Translates to: WHRFSAESSPGPAGRFPVLGPAV*PGCKPV Trigger: GACTGGTTTGCAGCCAGGCCAGACTGCGGGTCCAAG...CACTGGGAACCTTCCAGCCGGACCCGGTGATGATTCAGCAGAAAAGCGATGCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000122913.3 ENSMUST00000172472.8 |
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| 3UTR-3UTR CCA 90 bp | ACCAGATGTAGCGGACGCCGGGAGGATAGTTGGAGAATGTGTGTGAAACCTCCCCGCACAGCTGGTACTTaGACCCGCAGTCTGGCCTGG | + |
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Preference number: 2 (lower is better) Translates to: TRCSGRREDSWRMCVKPPRTAGT*TRSLAW Trigger: CCAGGCCAGACTGCGGGTCCAAGTACCAGCTGTGCG...GGGAGGTTTCACACACATTCTCCAACTATCCTCCCGGCGTCCGCTACATCTGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172472.8 |
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| 3UTR-3UTR CCA 90 bp | CCAGCCGGCCCAGTAGTGAGTGTCCACGCCTCCGTGCTGAAACCAGATGTAGCGCGCCGGGAGGATAGTTaGAGAATGTGTGTGAAACCT | + |
|
Preference number: 2 (lower is better) Translates to: PAGPVVSVHASVLKPDVARREDS*RMCVKP Trigger: AGGTTTCACACACATTCTCCAACTATCCTCCCGGCG...CGCTACATCTGGTTTCAGCACGGAGGCGTGGACACTCACTACTGGGCCGGCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129253.8 |
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| 3UTR-3UTR CCA 90 bp | AAAGCAGAGAGCGTACAGCAGCTGACCACCAGGCTAAGGACTGGCCAGCAGAGCTCCCCTTCCCAAGCCTaGCCCTTTCTGACTGTTTAC | + |
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Preference number: 2 (lower is better) Translates to: KAESVQQLTTRLRTGQQSSPSQA*PFLTVY Trigger: GTAAACAGTCAGAAAGGGCCAGGCTTGGGAAGGGGA...GCTCTGCTGGCCAGTCCTTAGCCTGGTGGTCAGCTGCTGTACGCTCTCTGCTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057907.10 ENSMUST00000129253.8 ENSMUST00000167160.8 |
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| 3UTR-3UTR CCA 90 bp | GAAACTCCACACACAGGCAGCTGGGGGCAAAGGCTAACAATGAGGTCTGGGAGTGAGGGGCAGCTTTGCTaGAGAGCTAGAGAGGAGGGT | + |
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Preference number: 2 (lower is better) Translates to: ETPHTGSWGQRLTMRSGSEGQLC*RAREEG Trigger: ACCCTCCTCTCTAGCTCTCCAGCAAAGCTGCCCCTC...ACTCCCAGACCTCATTGTTAGCCTTTGCCCCCAGCTGCCTGTGTGTGGAGTTTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000057907.10 ENSMUST00000105705.9 ENSMUST00000129253.8 ENSMUST00000167160.8 |
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| 3UTR-3UTR CCA 90 bp | CTTGGCATCGCTTTTCTGCTGAATCATCACCGGGTCCGGCTGGAAGGTTCCCAGAGTTGGACGCACAGCTaGTACTTGGACCCGCAGTCT | + |
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Preference number: 2 (lower is better) Translates to: LGIAFLLNHHRVRLEGSQSWTHS*YLDPQS Trigger: AGACTGCGGGTCCAAGTACCAGCTGTGCGTCCAACT...CTGGGAACCTTCCAGCCGGACCCGGTGATGATTCAGCAGAAAAGCGATGCCAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000122913.3 ENSMUST00000172472.8 |
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| 3UTR-3UTR CCA 90 bp | GGGCTGGGGCATCTTCAAGCCACAGAGGACTTGGCCAGGTCCTTCCACTCAAAAATCCTACCCCTCATCTaGCCTCTCATCCGGAGTCTT | + |
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Preference number: 2 (lower is better) Translates to: GLGHLQATEDLARSFHSKILPLI*PLIRSL Trigger: AAGACTCCGGATGAGAGGCCAGATGAGGGGTAGGAT...TTTTGAGTGGAAGGACCTGGCCAAGTCCTCTGTGGCTTGAAGATGCCCCAGCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000057907.10 ENSMUST00000129253.8 ENSMUST00000167160.8 |
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| 3UTR-3UTR CCA 90 bp | GGGCTGGGGCATCTTCAAGCCACAGAGGACTTGGCCAGGTCCTTCCACTCAAAAAAGCCACAGAGGACTTaGCCAGGTCCTTCCACTCAA | + |
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Preference number: 2 (lower is better) Translates to: GLGHLQATEDLARSFHSKKPQRT*PGPSTQ Trigger: TTGAGTGGAAGGACCTGGCCAAGTCCTCTGTGGCTT...TTTTGAGTGGAAGGACCTGGCCAAGTCCTCTGTGGCTTGAAGATGCCCCAGCCC 56% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000057907.10 ENSMUST00000129253.8 ENSMUST00000167160.8 |
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| 3UTR-3UTR CCA 90 bp | ACTTGGCATCGCTTTTCTGCTGAATCATCACCGGGTCCGGCTGGAAGGTTCCCAGCTGACGACAGGAGTTaGACGCACAGCTGGTACTTG | + |
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Preference number: 2 (lower is better) Translates to: TWHRFSAESSPGPAGRFPADDRS*THSWYL Trigger: CAAGTACCAGCTGTGCGTCCAACTCCTGTCGTCAGC...TGGGAACCTTCCAGCCGGACCCGGTGATGATTCAGCAGAAAAGCGATGCCAAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000122913.3 ENSMUST00000172472.8 |
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| 3UTR-3UTR GCA 90 bp | TGGCCTCTCATCCGGAGTCTTCTGGGGAGTCCTGCACTCATTGGTAGGATGACATTAGAGGGGCAGCTTTaGTGGAGAGCTAGAGAGGAG | + |
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Preference number: 2 (lower is better) Translates to: WPLIRSLLGSPALIGRMTLEGQL*WRAREE Trigger: CTCCTCTCTAGCTCTCCAGCAAAGCTGCCCCTCTAA...TGTCATCCTACCAATGAGTGCAGGACTCCCCAGAAGACTCCGGATGAGAGGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000057907.10 ENSMUST00000129253.8 ENSMUST00000167160.8 |
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| 3UTR-3UTR GCA 90 bp | GCCTGTCAGATATGTTGTCTGTCCCTGCTCTCCAGGGCCCTTGAGGAGAACAAGTTAGAGGGGCAGCTTTaGTGGAGAGCTAGAGAGGAG | + |
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Preference number: 2 (lower is better) Translates to: ACQICCLSLLSRALEENKLEGQL*WRAREE Trigger: CTCCTCTCTAGCTCTCCAGCAAAGCTGCCCCTCTAA...CTTGTTCTCCTCAAGGGCCCTGGAGAGCAGGGACAGACAACATATCTGACAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057907.10 ENSMUST00000129253.8 ENSMUST00000167160.8 |
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| 3UTR-3UTR CCA 90 bp | GCCTGTCAGATATGTTGTCTGTCCCTGCTCTCCAGGGCCCTTGAGGAGAACAAGTCCCCTTCCCAAGCCTaGCCCTTTCTGACTGTTTAC | + |
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Preference number: 2 (lower is better) Translates to: ACQICCLSLLSRALEENKSPSQA*PFLTVY Trigger: GTAAACAGTCAGAAAGGGCCAGGCTTGGGAAGGGGA...CTTGTTCTCCTCAAGGGCCCTGGAGAGCAGGGACAGACAACATATCTGACAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057907.10 ENSMUST00000129253.8 ENSMUST00000167160.8 |
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| 3UTR-3UTR GCA 90 bp | TGGCCTCTCATCCGGAGTCTTCTGGGGAGTCCTGCACTCATTGGTAGGATGACAGAGACCTGTTGTATCTaGCTATCCTCAGGCACTGCA | + |
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Preference number: 2 (lower is better) Translates to: WPLIRSLLGSPALIGRMTETCCI*LSSGTA Trigger: TGCAGTGCCTGAGGATAGGCAGATACAACAGGTCTC...TGTCATCCTACCAATGAGTGCAGGACTCCCCAGAAGACTCCGGATGAGAGGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057907.10 ENSMUST00000129253.8 ENSMUST00000167160.8 |
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| 3UTR-3UTR CCA 90 bp | AGATATGTTGTCTGTCCCTGCTCTCCAGGGCCCTTGAGGAGAACAAGGAGAGAGTCCCCTTCCCAAGCCTaGCCCTTTCTGACTGTTTAC | + |
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Preference number: 2 (lower is better) Translates to: RYVVCPCSPGPLRRTRRESPSQA*PFLTVY Trigger: GTAAACAGTCAGAAAGGGCCAGGCTTGGGAAGGGGA...CTCTCTCCTTGTTCTCCTCAAGGGCCCTGGAGAGCAGGGACAGACAACATATCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057907.10 ENSMUST00000129253.8 ENSMUST00000167160.8 |
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| 3UTR CAA 90 bp | ATGTGCTTGGTACCTGCAAAAGACCGAAGAGGGGATTTGAATCCCTaGGAACTGGAGTTACAGGTGGTTGTGAGCCACCATATGGGTGGT | + |
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Preference number: 2 (lower is better) Translates to: MCLVPAKDRRGDLNP*ELELQVVVSHHMGG Trigger: ACCACCCATATGGTGGCTCACAACCACCTGTAACTCCAGTTCCAAGGGATTCAAATCCCCTCTTCGGTCTTTTGCAGGTACCAAGCACAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151127.8 |
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| 3UTR-3UTR TCA 90 bp | GTACCTGCAAAAGACCGAAGAGGGGATTTGAATCCCTTGGAACTGGAGTTACAGACCATATGGGTGGTATaGTTTGAACCTGGCTCCTCT | + |
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Preference number: 2 (lower is better) Translates to: VPAKDRRGDLNPLELELQTIWVV*FEPGSS Trigger: AGAGGAGCCAGGTTCAAATCATACCACCCATATGGT...CTGTAACTCCAGTTCCAAGGGATTCAAATCCCCTCTTCGGTCTTTTGCAGGTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151127.8 |
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| 3UTR-3UTR CCA 90 bp | GGGCTGGGGCATCTTCAAGCCACAGAGGACTTGGCCAGGTCCTTCCACTCAAAATGGAAACATTTTATTTaGCTATGTAACAGGAGGGAT | + |
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Preference number: 2 (lower is better) Translates to: GLGHLQATEDLARSFHSKWKHFI*LCNRRD Trigger: ATCCCTCCTGTTACATAGCCAAATAAAATGTTTCCA...TTTTGAGTGGAAGGACCTGGCCAAGTCCTCTGTGGCTTGAAGATGCCCCAGCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000057907.10 ENSMUST00000129253.8 ENSMUST00000167160.8 |
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| 3UTR CAA 90 bp | ACTGGAGTTACAGGTGGTTGTGAGCCACCATATGGGTGGTATGATTaGAACCTGGCTCCTCTGAAGGAGCCAAAGTATTATGAACTATTG | + |
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Preference number: 2 (lower is better) Translates to: TGVTGGCEPPYGWYD*NLAPLKEPKYYELL Trigger: CAATAGTTCATAATACTTTGGCTCCTTCAGAGGAGCCAGGTTCAAATCATACCACCCATATGGTGGCTCACAACCACCTGTAACTCCAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151127.8 |
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| 3UTR CAA 90 bp | CCTCACCCATTGCTGCTTCAGTTTCCCAACACTGGGCACTTCCGGTaGCACACCTTTAGTTTATTACATGTGTATGAATATTTTGCCAGT | + |
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Preference number: 2 (lower is better) Translates to: PHPLLLQFPNTGHFR*HTFSLLHVYEYFAS Trigger: ACTGGCAAAATATTCATACACATGTAATAAACTAAAGGTGTGCAACCGGAAGTGCCCAGTGTTGGGAAACTGAAGCAGCAATGGGTGAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151127.8 |
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| 3UTR CCA 72 bp | GGGCTGACGACAGGAGTTGGACGCACAGCTGGTACTTaGACCCGCAGTCTGGCCTGGCTGCAAACCAGTCCT | + |
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Preference number: 3 (lower is better) Translates to: GLTTGVGRTAGT*TRSLAWLQTSP Trigger: AGGACTGGTTTGCAGCCAGGCCAGACTGCGGGTCCAAGTACCAGCTGTGCGTCCAACTCCTGTCGTCAGCCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000122913.3 ENSMUST00000172472.8 |
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| 3UTR CCA 72 bp | AAGGTTCCCAGTGGTGCGTGGGCTGACGACAGGAGTTaGACGCACAGCTGGTACTTGGACCCGCAGTCTGGC | + |
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Preference number: 3 (lower is better) Translates to: KVPSGAWADDRS*THSWYLDPQSG Trigger: GCCAGACTGCGGGTCCAAGTACCAGCTGTGCGTCCAACTCCTGTCGTCAGCCCACGCACCACTGGGAACCTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000122913.3 ENSMUST00000172472.8 |
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| 3UTR CCA 72 bp | GAGTTGGACGCACAGCTGGTACTTGGACCCGCAGTCTaGCCTGGCTGCAAACCAGTCCTTGACCTCGATGTC | + |
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Preference number: 3 (lower is better) Translates to: ELDAQLVLGPAV*PGCKPVLDLDV Trigger: GACATCGAGGTCAAGGACTGGTTTGCAGCCAGGCCAGACTGCGGGTCCAAGTACCAGCTGTGCGTCCAACTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000122913.3 ENSMUST00000172472.8 |
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| 3UTR CCA 72 bp | TCCTCAGGCACTGCACCCTTAGAGGGGCAGCTTTGCTaGAGAGCTAGAGAGGAGGGTGGCCCAGACATTAGA | + |
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Preference number: 3 (lower is better) Translates to: SSGTAPLEGQLC*RAREEGGPDIR Trigger: TCTAATGTCTGGGCCACCCTCCTCTCTAGCTCTCCAGCAAAGCTGCCCCTCTAAGGGTGCAGTGCCTGAGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000057907.10 ENSMUST00000105705.9 ENSMUST00000129253.8 ENSMUST00000167160.8 |
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| 3UTR CCA 72 bp | ACAGAGGACTTGGCCAGGTCCTTCCACTCAAAACCCTaGTCCATCCTACCCCTCATCTGGCCTCTCATCCGG | + |
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Preference number: 3 (lower is better) Translates to: TEDLARSFHSKP*SILPLIWPLIR Trigger: CCGGATGAGAGGCCAGATGAGGGGTAGGATGGACCAGGGTTTTGAGTGGAAGGACCTGGCCAAGTCCTCTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000057907.10 ENSMUST00000129253.8 ENSMUST00000167160.8 |
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| 3UTR TCA 72 bp | GTAGCGGACGCCGGGAGGATAGTTGGAGAATGTGTGTaGAACCCTGTAGAGCGACACACACACAGCCCTGTG | + |
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Preference number: 3 (lower is better) Translates to: VADAGRIVGECV*NPVERHTHSPV Trigger: CACAGGGCTGTGTGTGTGTCGCTCTACAGGGTTTCACACACATTCTCCAACTATCCTCCCGGCGTCCGCTAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153703.8 |
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| 3UTR TCA 72 bp | TGTGAAACCTCCCTCCACTTGGCATCGCTTTTCTGCTaGATCATCACCGGGTCCGGCTGGAAGGTTCCCAGT | + |
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Preference number: 3 (lower is better) Translates to: CETSLHLASLFC*IITGSGWKVPS Trigger: ACTGGGAACCTTCCAGCCGGACCCGGTGATGATTCAGCAGAAAAGCGATGCCAAGTGGAGGGAGGTTTCACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172472.8 |
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| 3UTR CCA 72 bp | GCTGAAACCAGATGTAGCGGACGCCGGGAGGATAGTTaGAGAATGTGTGTGAAACCCTGTAGAGCGACACAC | + |
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Preference number: 3 (lower is better) Translates to: AETRCSGRREDS*RMCVKPCRATH Trigger: GTGTGTCGCTCTACAGGGTTTCACACACATTCTCCAACTATCCTCCCGGCGTCCGCTACATCTGGTTTCAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153703.8 |
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| 3UTR CCA 72 bp | ACTGGAGTTACAGGTGGTTGTGAGCCACCATATGGGTaGTATGATTTGAACCTGGCTCCTCTGAAGGAGCCA | + |
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Preference number: 3 (lower is better) Translates to: TGVTGGCEPPYG*YDLNLAPLKEP Trigger: TGGCTCCTTCAGAGGAGCCAGGTTCAAATCATACCACCCATATGGTGGCTCACAACCACCTGTAACTCCAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151127.8 |
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| 3UTR CCA 72 bp | GCTGAAACCAGATGTAGCGGACGCCGGGAGGATAGTTaGAGAATGTGTGTGAAACCTTTCATTCTAGCATTC | + |
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Preference number: 3 (lower is better) Translates to: AETRCSGRREDS*RMCVKPFILAF Trigger: GAATGCTAGAATGAAAGGTTTCACACACATTCTCCAACTATCCTCCCGGCGTCCGCTACATCTGGTTTCAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129253.8 |
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| CDS-3UTR TCA 90 bp | GACTCTCGGGCCGTACCAGCCGGCCCAGTAGTGAGTGTCCACGCCTCCGTGCTGAATACCCTTCAGCCTTaGGGTCCACCACCTGGGACT | + |
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Preference number: 4 (lower is better) Translates to: DSRAVPAGPVVSVHASVLNTLQP*GPPPGT Trigger: AGTCCCAGGTGGTGGACCTCAAGGCTGAAGGGTATT...CAGCACGGAGGCGTGGACACTCACTACTGGGCCGGCTGGTACGGCCCGAGAGTC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129253.8 ENSMUST00000153703.8 |
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| CDS-3UTR CCA 90 bp | GACTCTCGGGCCGTACCAGCCGGCCCAGTAGTGAGTGTCCACGCCTCCGTGCTGAGTTGGACGCACAGCTaGTACTTGGACCCGCAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: DSRAVPAGPVVSVHASVLSWTHS*YLDPQS Trigger: AGACTGCGGGTCCAAGTACCAGCTGTGCGTCCAACT...CAGCACGGAGGCGTGGACACTCACTACTGGGCCGGCTGGTACGGCCCGAGAGTC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129253.8 ENSMUST00000153703.8 |
||
| CDS-3UTR CCA 90 bp | GCAGAGAGCGTACAGCAGCTGACCACCAGGCTAAGGACTGGCCAGCAGAGCCTTCTTGGACCCGCAGTCTaGCCTGGCTGCAAACCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: AESVQQLTTRLRTGQQSLLGPAV*PGCKPV Trigger: GACTGGTTTGCAGCCAGGCCAGACTGCGGGTCCAAG...AAGGCTCTGCTGGCCAGTCCTTAGCCTGGTGGTCAGCTGCTGTACGCTCTCTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057907.10 ENSMUST00000129253.8 ENSMUST00000167160.8 |
||
| CDS-3UTR CCA 90 bp | TCTCGGGCCGTACCAGCCGGCCCAGTAGTGAGTGTCCACGCCTCCGTGCTGAAAGCTGACGACAGGAGTTaGACGCACAGCTGGTACTTG | + |
|
Preference number: 4 (lower is better) Translates to: SRAVPAGPVVSVHASVLKADDRS*THSWYL Trigger: CAAGTACCAGCTGTGCGTCCAACTCCTGTCGTCAGC...TTTCAGCACGGAGGCGTGGACACTCACTACTGGGCCGGCTGGTACGGCCCGAGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129253.8 ENSMUST00000153703.8 |
||
| CDS-3UTR CCA 90 bp | GAGAGCGTACAGCAGCTGACCACCAGGCTAAGGACTGGCCAGCAGAGCCTTCTAATCACCGGGTCCGGCTaGAAGGTTCCCAGTGGTGCG | + |
|
Preference number: 4 (lower is better) Translates to: ESVQQLTTRLRTGQQSLLITGSG*KVPSGA Trigger: CGCACCACTGGGAACCTTCCAGCCGGACCCGGTGAT...TAGAAGGCTCTGCTGGCCAGTCCTTAGCCTGGTGGTCAGCTGCTGTACGCTCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057907.10 ENSMUST00000129253.8 ENSMUST00000167160.8 |
||
| CDS-3UTR CCA 90 bp | TCCTCAGGCACTGCACCCTTAGAGGGGCAGCTTTGCTGGAGAGCTAGAGAGGAGATCACCGGGTCCGGCTaGAAGGTTCCCAGTGGTGCG | + |
|
Preference number: 4 (lower is better) Translates to: SSGTAPLEGQLCWRAREEITGSG*KVPSGA Trigger: CGCACCACTGGGAACCTTCCAGCCGGACCCGGTGAT...CTCCTCTCTAGCTCTCCAGCAAAGCTGCCCCTCTAAGGGTGCAGTGCCTGAGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000057907.10 ENSMUST00000105705.9 ENSMUST00000129253.8 ENSMUST00000167160.8 |
||
| CDS-3UTR CCA 90 bp | CGCCTCCGTGCTGAAACCAGATGTAGCGGACGCCGGGAGGATAGTTGGAGAATGATCACCGGGTCCGGCTaGAAGGTTCCCAGTGGTGCG | + |
|
Preference number: 4 (lower is better) Translates to: RLRAETRCSGRREDSWRMITGSG*KVPSGA Trigger: CGCACCACTGGGAACCTTCCAGCCGGACCCGGTGAT...CATTCTCCAACTATCCTCCCGGCGTCCGCTACATCTGGTTTCAGCACGGAGGCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129253.8 ENSMUST00000153703.8 |
||
| CDS-3UTR CCA 90 bp | ACCCCTCATCTGGCCTCTCATCCGGAGTCTTCTGGGGAGTCCTGCACTCATTGGATCACCGGGTCCGGCTaGAAGGTTCCCAGTGGTGCG | + |
|
Preference number: 4 (lower is better) Translates to: TPHLASHPESSGESCTHWITGSG*KVPSGA Trigger: CGCACCACTGGGAACCTTCCAGCCGGACCCGGTGAT...CCAATGAGTGCAGGACTCCCCAGAAGACTCCGGATGAGAGGCCAGATGAGGGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000057907.10 ENSMUST00000129253.8 ENSMUST00000167160.8 |
||
| CDS-3UTR TCA 90 bp | ACAGGAGTTGGACGCACAGCTGGTACTTGGACCCGCAGTCTGGCCTGGCTGCAACCACCACCTGGGACTTaGGGCAGGTGCTTCCATTCA | + |
|
Preference number: 4 (lower is better) Translates to: TGVGRTAGTWTRSLAWLQPPPGT*GRCFHS Trigger: TGAATGGAAGCACCTGCCTCAAGTCCCAGGTGGTGG...TTGCAGCCAGGCCAGACTGCGGGTCCAAGTACCAGCTGTGCGTCCAACTCCTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122913.3 |
||
| CDS-3UTR CCA 90 bp | CTACCCCTCATCTGGCCTCTCATCCGGAGTCTTCTGGGGAGTCCTGCACTCATTCGCACAGCTGGTACTTaGACCCGCAGTCTGGCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LPLIWPLIRSLLGSPALIRTAGT*TRSLAW Trigger: CCAGGCCAGACTGCGGGTCCAAGTACCAGCTGTGCG...AATGAGTGCAGGACTCCCCAGAAGACTCCGGATGAGAGGCCAGATGAGGGGTAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000057907.10 ENSMUST00000129253.8 ENSMUST00000167160.8 |
||
| CDS-3UTR CCA 90 bp | TGGGGGCAAAGGCTAACAATGAGGTCTGGGAGTTTCCACCTCCCCTTCCCAAGCCGCACAGCTGGTACTTaGACCCGCAGTCTGGCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: WGQRLTMRSGSFHLPFPSRTAGT*TRSLAW Trigger: CCAGGCCAGACTGCGGGTCCAAGTACCAGCTGTGCG...GCTTGGGAAGGGGAGGTGGAAACTCCCAGACCTCATTGTTAGCCTTTGCCCCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000057907.10 ENSMUST00000105705.9 ENSMUST00000129253.8 ENSMUST00000167160.8 |
||
| CDS-3UTR CCA 90 bp | GTGGGGGTTAGAGGCAGGAGGACCAGGAGCTCAAGGTGTCTTCTGCTATGTAGCCGCACAGCTGGTACTTaGACCCGCAGTCTGGCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: VGVRGRRTRSSRCLLLCSRTAGT*TRSLAW Trigger: CCAGGCCAGACTGCGGGTCCAAGTACCAGCTGTGCG...GCTACATAGCAGAAGACACCTTGAGCTCCTGGTCCTCCTGCCTCTAACCCCCAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000153703.8 |
||
| CDS-3UTR CCA 90 bp | CCACCGATGGGGCTGGGGCATCTTCAAGCCACAGAGGACTTGGCCAGGTCCTTCGCTGACGACAGGAGTTaGACGCACAGCTGGTACTTG | + |
|
Preference number: 4 (lower is better) Translates to: PPMGLGHLQATEDLARSFADDRS*THSWYL Trigger: CAAGTACCAGCTGTGCGTCCAACTCCTGTCGTCAGC...GAAGGACCTGGCCAAGTCCTCTGTGGCTTGAAGATGCCCCAGCCCCATCGGTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000057907.10 ENSMUST00000129253.8 ENSMUST00000167160.8 |
||
| CDS-3UTR CCA 90 bp | TCTCGGGCCGTACCAGCCGGCCCAGTAGTGAGTGTCCACGCCTCCGTGCTGAAAGACCCTCCCTCCACTTaGCATCGCTTTTCTGCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: SRAVPAGPVVSVHASVLKDPPST*HRFSAE Trigger: TTCAGCAGAAAAGCGATGCCAAGTGGAGGGAGGGTC...TTTCAGCACGGAGGCGTGGACACTCACTACTGGGCCGGCTGGTACGGCCCGAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129253.8 ENSMUST00000153703.8 |
||
| CDS-3UTR CCA 90 bp | GACGACAGGAGTTGGACGCACAGCTGGTACTTGGACCCGCAGTCTGGCCTGGCTTTGAGGTCCACCACCTaGGACTTGAGGCAGGTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: DDRSWTHSWYLDPQSGLALRSTT*DLRQVL Trigger: AAGCACCTGCCTCAAGTCCCAGGTGGTGGACCTCAA...AGCCAGGCCAGACTGCGGGTCCAAGTACCAGCTGTGCGTCCAACTCCTGTCGTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122913.3 |
||
| CDS-3UTR TCA 90 bp | CCACGCCTCCGTGCTGAAACCAGATGTAGCGGACGCCGGGAGGATAGTTGGAGACCACCACCTGGGACTTaGGGCAGGTGTAATAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: PRLRAETRCSGRREDSWRPPPGT*GRCNRK Trigger: CTTCCTATTACACCTGCCTCAAGTCCCAGGTGGTGG...TCTCCAACTATCCTCCCGGCGTCCGCTACATCTGGTTTCAGCACGGAGGCGTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129253.8 ENSMUST00000153703.8 |
||
| CDS-3UTR TCA 90 bp | GCAGAGAGCGTACAGCAGCTGACCACCAGGCTAAGGACTGGCCAGCAGAGCCTTCCACCACCTGGGACTTaGGGCAGGTGTAATAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: AESVQQLTTRLRTGQQSLPPPGT*GRCNRK Trigger: CTTCCTATTACACCTGCCTCAAGTCCCAGGTGGTGG...AAGGCTCTGCTGGCCAGTCCTTAGCCTGGTGGTCAGCTGCTGTACGCTCTCTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057907.10 ENSMUST00000129253.8 ENSMUST00000167160.8 |
||
| CDS-3UTR TCA 90 bp | CCACCGATGGGGCTGGGGCATCTTCAAGCCACAGAGGACTTGGCCAGGTCCTTCGTTGGAGAATGTGTGTaGAACCTCCCTCCACTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: PPMGLGHLQATEDLARSFVGECV*NLPPLG Trigger: GCCAAGTGGAGGGAGGTTTCACACACATTCTCCAAC...GAAGGACCTGGCCAAGTCCTCTGTGGCTTGAAGATGCCCCAGCCCCATCGGTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057907.10 ENSMUST00000167160.8 |
||
| CDS-3UTR CCA 90 bp | AGAAACTCCACACACAGGCAGCTGGGGGCAAAGGCTAACAATGAGGTCTGGGAGCGCACAGCTGGTACTTaGACCCGCAGTCTGGCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: RNSTHRQLGAKANNEVWERTAGT*TRSLAW Trigger: CCAGGCCAGACTGCGGGTCCAAGTACCAGCTGTGCG...CTCCCAGACCTCATTGTTAGCCTTTGCCCCCAGCTGCCTGTGTGTGGAGTTTCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000057907.10 ENSMUST00000105705.9 ENSMUST00000129253.8 ENSMUST00000167160.8 |
||
| CDS-3UTR CCA 90 bp | CCTGTCAGATATGTTGTCTGTCCCTGCTCTCCAGGGCCCTTGAGGAGAACAAGGCGCACAGCTGGTACTTaGACCCGCAGTCTGGCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: PVRYVVCPCSPGPLRRTRRTAGT*TRSLAW Trigger: CCAGGCCAGACTGCGGGTCCAAGTACCAGCTGTGCG...CCTTGTTCTCCTCAAGGGCCCTGGAGAGCAGGGACAGACAACATATCTGACAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057907.10 ENSMUST00000129253.8 ENSMUST00000167160.8 |
||
| CDS-3UTR CCA 90 bp | GAGTGTCCACGCCTCCGTGCTGAAACCAGATGTAGCGGACGCCGGGAGGATAGTGCTGACGACAGGAGTTaGACGCACAGCTGGTACTTG | + |
|
Preference number: 4 (lower is better) Translates to: ECPRLRAETRCSGRREDSADDRS*THSWYL Trigger: CAAGTACCAGCTGTGCGTCCAACTCCTGTCGTCAGC...ACTATCCTCCCGGCGTCCGCTACATCTGGTTTCAGCACGGAGGCGTGGACACTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129253.8 ENSMUST00000153703.8 |
||
| CDS-3UTR CCA 90 bp | CTGGTACTTGGACCCGCAGTCTGGCCTGGCTGCAAACCAGTCCTTGACCTCGATTTGAGGTCCACCACCTaGGACTTGAGGCAGGTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LVLGPAVWPGCKPVLDLDLRSTT*DLRQVL Trigger: CAGCACCTGCCTCAAGTCCCAGGTGGTGGACCTCAA...ATCGAGGTCAAGGACTGGTTTGCAGCCAGGCCAGACTGCGGGTCCAAGTACCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172472.8 |
||
| CDS-3UTR TCA 90 bp | AAAGCAGAGAGCGTACAGCAGCTGACCACCAGGCTAAGGACTGGCCAGCAGAGCCCACCACCTGGGACTTaGGGCAGGTGTAATAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: KAESVQQLTTRLRTGQQSPPPGT*GRCNRK Trigger: CTTCCTATTACACCTGCCTCAAGTCCCAGGTGGTGG...GCTCTGCTGGCCAGTCCTTAGCCTGGTGGTCAGCTGCTGTACGCTCTCTGCTTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057907.10 ENSMUST00000129253.8 ENSMUST00000167160.8 |
||
| CDS-3UTR TCA 90 bp | GTACCAGCCGGCCCAGTAGTGAGTGTCCACGCCTCCGTGCTGAAACCAGATGTACCACCACCTGGGACTTaGGGCAGGTGTAATAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: VPAGPVVSVHASVLKPDVPPPGT*GRCNRK Trigger: CTTCCTATTACACCTGCCTCAAGTCCCAGGTGGTGG...TACATCTGGTTTCAGCACGGAGGCGTGGACACTCACTACTGGGCCGGCTGGTAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129253.8 ENSMUST00000153703.8 |
||
| CDS-3UTR TCA 90 bp | AAAGCAGAGAGCGTACAGCAGCTGACCACCAGGCTAAGGACTGGCCAGCAGAGCAATACCCTTCAGCCTTaGGGTCCACCACCTGGGACT | + |
|
Preference number: 4 (lower is better) Translates to: KAESVQQLTTRLRTGQQSNTLQP*GPPPGT Trigger: AGTCCCAGGTGGTGGACCTCAAGGCTGAAGGGTATT...GCTCTGCTGGCCAGTCCTTAGCCTGGTGGTCAGCTGCTGTACGCTCTCTGCTTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057907.10 ENSMUST00000129253.8 ENSMUST00000167160.8 |
||
| CDS-3UTR CCA 90 bp | GTTGGACGCACAGCTGGTACTTGGACCCGCAGTCTGGCCTGGCTGCAAACCAGTCAGCAGTTGGCGAGCTaGGATGTGGATGAACAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: VGRTAGTWTRSLAWLQTSQQLAS*DVDEQF Trigger: GAACTGTTCATCCACATCCCAGCTCGCCAACTGCTG...ACTGGTTTGCAGCCAGGCCAGACTGCGGGTCCAAGTACCAGCTGTGCGTCCAAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000122913.3 ENSMUST00000172472.8 |
||
| CDS-3UTR CCA 90 bp | AGAAACTCCACACACAGGCAGCTGGGGGCAAAGGCTAACAATGAGGTCTGGGAGCTTGGACCCGCAGTCTaGCCTGGCTGCAAACCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: RNSTHRQLGAKANNEVWELGPAV*PGCKPV Trigger: GACTGGTTTGCAGCCAGGCCAGACTGCGGGTCCAAG...CTCCCAGACCTCATTGTTAGCCTTTGCCCCCAGCTGCCTGTGTGTGGAGTTTCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000057907.10 ENSMUST00000129253.8 ENSMUST00000167160.8 |
||
| CDS-3UTR CCA 90 bp | CCACCGATGGGGCTGGGGCATCTTCAAGCCACAGAGGACTTGGCCAGGTCCTTCCGCCGGGAGGATAGTTaGAGAATGTGTGTGAAACCT | + |
|
Preference number: 4 (lower is better) Translates to: PPMGLGHLQATEDLARSFRREDS*RMCVKP Trigger: AGGTTTCACACACATTCTCCAACTATCCTCCCGGCG...GAAGGACCTGGCCAAGTCCTCTGTGGCTTGAAGATGCCCCAGCCCCATCGGTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057907.10 ENSMUST00000167160.8 |
||
| CDS-3UTR CCA 90 bp | ACTCCACACACAGGCAGCTGGGGGCAAAGGCTAACAATGAGGTCTGGGAGTTTCCTTGGACCCGCAGTCTaGCCTGGCTGCAAACCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: TPHTGSWGQRLTMRSGSFLGPAV*PGCKPG Trigger: ACCAGGTTTGCAGCCAGGCCAGACTGCGGGTCCAAG...GAAACTCCCAGACCTCATTGTTAGCCTTTGCCCCCAGCTGCCTGTGTGTGGAGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105705.9 |
||
| CDS-3UTR CCA 90 bp | GTTGCCAGGGTAGTTAGCCCTCACCCATTGCTGCTTCAGTTTCCCAACACTGGGAGGCCCAGGTTCCCATaGGGTCCTTGCCCACATACC | + |
|
Preference number: 4 (lower is better) Translates to: VARVVSPHPLLLQFPNTGRPRFP*GPCPHT Trigger: GGTATGTGGGCAAGGACCCCATGGGAACCTGGGCCT...CCCAGTGTTGGGAAACTGAAGCAGCAATGGGTGAGGGCTAACTACCCTGGCAAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151127.8 |
||
| CDS-3UTR CCA 90 bp | CAGCTGGTACTTGGACCCGCAGTCTGGCCTGGCTGCAAACCAGTCCTTGACCTCGCAGGTGCTGGTCATTaGGGAATTCCTTTCGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: QLVLGPAVWPGCKPVLDLAGAGH*GIPFAG Trigger: ACCAGCGAAAGGAATTCCCCAATGACCAGCACCTGC...GAGGTCAAGGACTGGTTTGCAGCCAGGCCAGACTGCGGGTCCAAGTACCAGCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172472.8 |
||
| CDS-3UTR TCA 90 bp | TCCTCAGGCACTGCACCCTTAGAGGGGCAGCTTTGCTGGAGAGCTAGAGAGGAGGAGCTGGGATGTGGATaGACAGTTCCAGCAGGATGT | + |
|
Preference number: 4 (lower is better) Translates to: SSGTAPLEGQLCWRAREEELGCG*TVPAGC Trigger: ACATCCTGCTGGAACTGTTCATCCACATCCCAGCTC...CTCCTCTCTAGCTCTCCAGCAAAGCTGCCCCTCTAAGGGTGCAGTGCCTGAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000057907.10 ENSMUST00000105705.9 ENSMUST00000129253.8 ENSMUST00000167160.8 |
||
| CDS-3UTR TCA 90 bp | CACGCCTCCGTGCTGAAACCAGATGTAGCGGACGCCGGGAGGATAGTTGGAGAAGAGCTGGGATGTGGATaGACAGTTCCAGCAGGATGT | + |
|
Preference number: 4 (lower is better) Translates to: HASVLKPDVADAGRIVGEELGCG*TVPAGC Trigger: ACATCCTGCTGGAACTGTTCATCCACATCCCAGCTC...TTCTCCAACTATCCTCCCGGCGTCCGCTACATCTGGTTTCAGCACGGAGGCGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129253.8 ENSMUST00000172472.8 |
||
| CDS-3UTR GCA 90 bp | AGAAACTCCACACACAGGCAGCTGGGGGCAAAGGCTAACAATGAGGTCTGGGAGGCAGTCTGGCCTGGCTaGAAACCTGGTCATTGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: RNSTHRQLGAKANNEVWEAVWPG*KPGHWG Trigger: TCCCCAATGACCAGGTTTGCAGCCAGGCCAGACTGC...CTCCCAGACCTCATTGTTAGCCTTTGCCCCCAGCTGCCTGTGTGTGGAGTTTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105705.9 |
||
| CDS-3UTR CCA 90 bp | ACCAGATGTAGCGGACGCCGGGAGGATAGTTGGAGAATGTGTGTGAAACCCTGTCTTGGACCCGCAGTCTaGCCTGGCTGCAAACCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: TRCSGRREDSWRMCVKPCLGPAV*PGCKPV Trigger: GACTGGTTTGCAGCCAGGCCAGACTGCGGGTCCAAG...ACAGGGTTTCACACACATTCTCCAACTATCCTCCCGGCGTCCGCTACATCTGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153703.8 |
||
| CDS-3UTR CCA 90 bp | GGGGCAAAGGCTAACAATGAGGTCTGGGAGTTTCCACCTCCCCTTCCCAAGCCTAGTTGGACGCACAGCTaGTACTTGGACCCGCAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: GAKANNEVWEFPPPLPKPSWTHS*YLDPQS Trigger: AGACTGCGGGTCCAAGTACCAGCTGTGCGTCCAACT...AGGCTTGGGAAGGGGAGGTGGAAACTCCCAGACCTCATTGTTAGCCTTTGCCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000057907.10 ENSMUST00000105705.9 ENSMUST00000129253.8 ENSMUST00000167160.8 |
||
| CDS-3UTR CCA 90 bp | GGGGCAAAGGCTAACAATGAGGTCTGGGAGTTTCCACCTCCCCTTCCCAAGCCTGCTGACGACAGGAGTTaGACGCACAGCTGGTACTTG | + |
|
Preference number: 4 (lower is better) Translates to: GAKANNEVWEFPPPLPKPADDRS*THSWYL Trigger: CAAGTACCAGCTGTGCGTCCAACTCCTGTCGTCAGC...AGGCTTGGGAAGGGGAGGTGGAAACTCCCAGACCTCATTGTTAGCCTTTGCCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000057907.10 ENSMUST00000105705.9 ENSMUST00000129253.8 ENSMUST00000167160.8 |
||
| CDS-3UTR CCA 90 bp | CACCGATGGGGCTGGGGCATCTTCAAGCCACAGAGGACTTGGCCAGGTCCTTCCAAACCTCCCTCCACTTaGCATCGCTTTTCTGCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: HRWGWGIFKPQRTWPGPSKPPST*HRFSAE Trigger: TTCAGCAGAAAAGCGATGCCAAGTGGAGGGAGGTTT...GGAAGGACCTGGCCAAGTCCTCTGTGGCTTGAAGATGCCCCAGCCCCATCGGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000057907.10 ENSMUST00000167160.8 |
||
| CDS-3UTR TCA 90 bp | GCAAAGGCTAACAATGAGGTCTGGGAGTTTCCACCTCCCCTTCCCAAGCCTGGCGAGCTGGGATGTGGATaGACAGTTCCAGCAGGATGT | + |
|
Preference number: 4 (lower is better) Translates to: AKANNEVWEFPPPLPKPGELGCG*TVPAGC Trigger: ACATCCTGCTGGAACTGTTCATCCACATCCCAGCTC...GCCAGGCTTGGGAAGGGGAGGTGGAAACTCCCAGACCTCATTGTTAGCCTTTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000057907.10 ENSMUST00000105705.9 ENSMUST00000129253.8 ENSMUST00000167160.8 |
||
| CDS-3UTR TCA 90 bp | CTTGGCATCGCTTTTCTGCTGAATCATCACCGGGTCCGGCTGGAAGGTTCCCAGGAGCTGGGATGTGGATaGACAGTTCCAGCAGGATGT | + |
|
Preference number: 4 (lower is better) Translates to: LGIAFLLNHHRVRLEGSQELGCG*TVPAGC Trigger: ACATCCTGCTGGAACTGTTCATCCACATCCCAGCTC...CTGGGAACCTTCCAGCCGGACCCGGTGATGATTCAGCAGAAAAGCGATGCCAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000122913.3 ENSMUST00000172472.8 |
||
| CDS-3UTR TCA 90 bp | CTCCCACCGATGGGGCTGGGGCATCTTCAAGCCACAGAGGACTTGGCCAGGTCCTCACGAAGTATTTCTTaGCCTGGTCATTGGGGAATT | + |
|
Preference number: 4 (lower is better) Translates to: LPPMGLGHLQATEDLARSSRSIS*PGHWGI Trigger: AATTCCCCAATGACCAGGTCAAGAAATACTTCGTGA...GGACCTGGCCAAGTCCTCTGTGGCTTGAAGATGCCCCAGCCCCATCGGTGGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000057907.10 ENSMUST00000129253.8 ENSMUST00000167160.8 |
||
| CDS-3UTR TCA 90 bp | GCTCCCACCGATGGGGCTGGGGCATCTTCAAGCCACAGAGGACTTGGCCAGGTCTCACGAAGTATTTCTTaGCCTGGTCATTGGGGAATT | + |
|
Preference number: 4 (lower is better) Translates to: APTDGAGASSSHRGLGQVSRSIS*PGHWGI Trigger: AATTCCCCAATGACCAGGTCAAGAAATACTTCGTGA...GACCTGGCCAAGTCCTCTGTGGCTTGAAGATGCCCCAGCCCCATCGGTGGGAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000057907.10 ENSMUST00000129253.8 ENSMUST00000167160.8 |
||
| CDS-3UTR TCA 90 bp | CCTGTCAGATATGTTGTCTGTCCCTGCTCTCCAGGGCCCTTGAGGAGAACAAGGAATACCCTTCAGCCTTaGGGTCCACCACCTGGGACT | + |
|
Preference number: 4 (lower is better) Translates to: PVRYVVCPCSPGPLRRTRNTLQP*GPPPGT Trigger: AGTCCCAGGTGGTGGACCTCAAGGCTGAAGGGTATT...CCTTGTTCTCCTCAAGGGCCCTGGAGAGCAGGGACAGACAACATATCTGACAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057907.10 ENSMUST00000129253.8 ENSMUST00000167160.8 |
||
| CDS-3UTR TCA 90 bp | CTCCGTGCTGAAACCAGATGTAGCGGACGCCGGGAGGATAGTTGGAGAATGTGTAATACCCTTCAGCCTTaGGGTCCACCACCTGGGACT | + |
|
Preference number: 4 (lower is better) Translates to: LRAETRCSGRREDSWRMCNTLQP*GPPPGT Trigger: AGTCCCAGGTGGTGGACCTCAAGGCTGAAGGGTATT...ACACATTCTCCAACTATCCTCCCGGCGTCCGCTACATCTGGTTTCAGCACGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129253.8 ENSMUST00000153703.8 |
||
| CDS-3UTR CCA 90 bp | CCACCGATGGGGCTGGGGCATCTTCAAGCCACAGAGGACTTGGCCAGGTCCTTCGGGAATTCCTTTCGCTaGTCTTTAGAGAGATCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: PPMGLGHLQATEDLARSFGNSFR*SLERSS Trigger: AGAGGATCTCTCTAAAGACCAGCGAAAGGAATTCCC...GAAGGACCTGGCCAAGTCCTCTGTGGCTTGAAGATGCCCCAGCCCCATCGGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000057907.10 ENSMUST00000129253.8 ENSMUST00000167160.8 |
||
| CDS-3UTR CCA 90 bp | AAGAGGGGATTTGAATCCCTTGGAACTGGAGTTACAGGTGGTTGTGAGCCACCACGCACAGCTGGTACTTaGACCCGCAGTCTGGCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: KRGFESLGTGVTGGCEPPRTAGT*TRSLAW Trigger: CCAGGCCAGACTGCGGGTCCAAGTACCAGCTGTGCG...TGGTGGCTCACAACCACCTGTAACTCCAGTTCCAAGGGATTCAAATCCCCTCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151127.8 |
||
| CDS-3UTR CCA 90 bp | ACTCCACACACAGGCAGCTGGGGGCAAAGGCTAACAATGAGGTCTGGGAGTTTCAGTTGGACGCACAGCTaGTACTTGGACCCGCAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: TPHTGSWGQRLTMRSGSFSWTHS*YLDPQS Trigger: AGACTGCGGGTCCAAGTACCAGCTGTGCGTCCAACT...GAAACTCCCAGACCTCATTGTTAGCCTTTGCCCCCAGCTGCCTGTGTGTGGAGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000057907.10 ENSMUST00000105705.9 ENSMUST00000129253.8 ENSMUST00000167160.8 |
||
| CDS-3UTR CCA 90 bp | ACTCCACACACAGGCAGCTGGGGGCAAAGGCTAACAATGAGGTCTGGGAGTTTCGCTGACGACAGGAGTTaGACGCACAGCTGGTACTTG | + |
|
Preference number: 4 (lower is better) Translates to: TPHTGSWGQRLTMRSGSFADDRS*THSWYL Trigger: CAAGTACCAGCTGTGCGTCCAACTCCTGTCGTCAGC...GAAACTCCCAGACCTCATTGTTAGCCTTTGCCCCCAGCTGCCTGTGTGTGGAGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000057907.10 ENSMUST00000105705.9 ENSMUST00000129253.8 ENSMUST00000167160.8 |
||
| CDS-3UTR CCA 90 bp | GCCACAGAGGACTTGGCCAGGTCCTTCCACTCAAAACCCTGGTCCATCCTACCCCGCCGGGAGGATAGTTaGAGAATGTGTGTGAAACCT | + |
|
Preference number: 4 (lower is better) Translates to: ATEDLARSFHSKPWSILPRREDS*RMCVKP Trigger: AGGTTTCACACACATTCTCCAACTATCCTCCCGGCG...GGGTAGGATGGACCAGGGTTTTGAGTGGAAGGACCTGGCCAAGTCCTCTGTGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057907.10 ENSMUST00000167160.8 |
||
| CDS-3UTR TCA 90 bp | AGAAACTCCACACACAGGCAGCTGGGGGCAAAGGCTAACAATGAGGTCTGGGAGGTTGGAGAATGTGTGTaGAACCTCCCTCCACTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: RNSTHRQLGAKANNEVWEVGECV*NLPPLG Trigger: GCCAAGTGGAGGGAGGTTTCACACACATTCTCCAAC...CTCCCAGACCTCATTGTTAGCCTTTGCCCCCAGCTGCCTGTGTGTGGAGTTTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000057907.10 ENSMUST00000105705.9 ENSMUST00000167160.8 |
||
| CDS-3UTR TCA 90 bp | GAAACTCCACACACAGGCAGCTGGGGGCAAAGGCTAACAATGAGGTCTGGGAGTGTTGGAGAATGTGTGTaGAACCTCCCTCCACTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: ETPHTGSWGQRLTMRSGSVGECV*NLPPLG Trigger: GCCAAGTGGAGGGAGGTTTCACACACATTCTCCAAC...ACTCCCAGACCTCATTGTTAGCCTTTGCCCCCAGCTGCCTGTGTGTGGAGTTTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000057907.10 ENSMUST00000105705.9 ENSMUST00000167160.8 |
||
| CDS-3UTR CCA 90 bp | GAAACTCCACACACAGGCAGCTGGGGGCAAAGGCTAACAATGAGGTCTGGGAGTCAGCAGTTGGCGAGCTaGGATGTGGATGAACAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: ETPHTGSWGQRLTMRSGSQQLAS*DVDEQF Trigger: GAACTGTTCATCCACATCCCAGCTCGCCAACTGCTG...ACTCCCAGACCTCATTGTTAGCCTTTGCCCCCAGCTGCCTGTGTGTGGAGTTTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000057907.10 ENSMUST00000105705.9 ENSMUST00000129253.8 ENSMUST00000167160.8 |
||
| CDS-3UTR CCA 90 bp | CTCCGTGCTGAAACCAGATGTAGCGGACGCCGGGAGGATAGTTGGAGAATGTGTCAGCAGTTGGCGAGCTaGGATGTGGATGAACAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: LRAETRCSGRREDSWRMCQQLAS*DVDEQF Trigger: GAACTGTTCATCCACATCCCAGCTCGCCAACTGCTG...ACACATTCTCCAACTATCCTCCCGGCGTCCGCTACATCTGGTTTCAGCACGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129253.8 ENSMUST00000172472.8 |
||
| CDS-3UTR CCA 90 bp | GAGTGTCCACGCCTCCGTGCTGAAACCAGATGTAGCGGACGCCGGGAGGATAGTGGGAATTCCTTTCGCTaGTCTTTAGAGAGATCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: ECPRLRAETRCSGRREDSGNSFR*SLERSS Trigger: AGAGGATCTCTCTAAAGACCAGCGAAAGGAATTCCC...ACTATCCTCCCGGCGTCCGCTACATCTGGTTTCAGCACGGAGGCGTGGACACTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000129253.8 ENSMUST00000153703.8 ENSMUST00000172472.8 |
||
| CDS-3UTR CCA 90 bp | AGCCTGGCCCTTTCTGACTGTTTACTAATTAGGGCTCTGAGGACTGGGGCTCAGAGTTGGACGCACAGCTaGTACTTGGACCCGCAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: SLALSDCLLIRALRTGAQSWTHS*YLDPQS Trigger: AGACTGCGGGTCCAAGTACCAGCTGTGCGTCCAACT...CTGAGCCCCAGTCCTCAGAGCCCTAATTAGTAAACAGTCAGAAAGGGCCAGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057907.10 ENSMUST00000129253.8 ENSMUST00000167160.8 |
||
| CDS-3UTR CCA 90 bp | TGGGGGCAAAGGCTAACAATGAGGTCTGGGAGTTTCCACCTCCCCTTCCCAAGCCGCCGGGAGGATAGTTaGAGAATGTGTGTGAAACCT | + |
|
Preference number: 4 (lower is better) Translates to: WGQRLTMRSGSFHLPFPSRREDS*RMCVKP Trigger: AGGTTTCACACACATTCTCCAACTATCCTCCCGGCG...GCTTGGGAAGGGGAGGTGGAAACTCCCAGACCTCATTGTTAGCCTTTGCCCCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000057907.10 ENSMUST00000105705.9 ENSMUST00000167160.8 |
||
| CDS-3UTR CCA 90 bp | GGGGTTAGAGGCAGGAGGACCAGGAGCTCAAGGTGTCTTCTGCTATGTAGCAAGGACCCTCCCTCCACTTaGCATCGCTTTTCTGCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: GVRGRRTRSSRCLLLCSKDPPST*HRFSAE Trigger: TTCAGCAGAAAAGCGATGCCAAGTGGAGGGAGGGTC...CTTGCTACATAGCAGAAGACACCTTGAGCTCCTGGTCCTCCTGCCTCTAACCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000153703.8 |
||
| CDS-3UTR CCA 90 bp | CCTCTCATCCGGAGTCTTCTGGGGAGTCCTGCACTCATTGGTAGGATGACAAAGCAGCAGTTGGCGAGCTaGGATGTGGATGAACAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: PLIRSLLGSPALIGRMTKQQLAS*DVDEQF Trigger: GAACTGTTCATCCACATCCCAGCTCGCCAACTGCTG...CTTTGTCATCCTACCAATGAGTGCAGGACTCCCCAGAAGACTCCGGATGAGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057907.10 ENSMUST00000129253.8 ENSMUST00000167160.8 |
||
| CDS-3UTR CCA 90 bp | CACGCCTCCGTGCTGAAACCAGATGTAGCGGACGCCGGGAGGATAGTTGGAGAAGGGAATTCCTTTCGCTaGTCTTTAGAGAGATCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: HASVLKPDVADAGRIVGEGNSFR*SLERSS Trigger: AGAGGATCTCTCTAAAGACCAGCGAAAGGAATTCCC...TTCTCCAACTATCCTCCCGGCGTCCGCTACATCTGGTTTCAGCACGGAGGCGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000129253.8 ENSMUST00000153703.8 ENSMUST00000172472.8 |
||
| CDS-3UTR CCA 90 bp | CCGAAGAGGGGATTTGAATCCCTTGGAACTGGAGTTACAGGTGGTTGTGAGCCAAGTTGGACGCACAGCTaGTACTTGGACCCGCAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: PKRGFESLGTGVTGGCEPSWTHS*YLDPQS Trigger: AGACTGCGGGTCCAAGTACCAGCTGTGCGTCCAACT...TGGCTCACAACCACCTGTAACTCCAGTTCCAAGGGATTCAAATCCCCTCTTCGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151127.8 |
||
| CDS-3UTR CCA 90 bp | GCAAAGGCTAACAATGAGGTCTGGGAGTTTCCACCTCCCCTTCCCAAGCCTGGCAAACCTCCCTCCACTTaGCATCGCTTTTCTGCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: AKANNEVWEFPPPLPKPGKPPST*HRFSAE Trigger: TTCAGCAGAAAAGCGATGCCAAGTGGAGGGAGGTTT...GCCAGGCTTGGGAAGGGGAGGTGGAAACTCCCAGACCTCATTGTTAGCCTTTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000057907.10 ENSMUST00000105705.9 ENSMUST00000167160.8 |
||
| CDS-3UTR CCA 90 bp | GGGGCAAAGGCTAACAATGAGGTCTGGGAGTTTCCACCTCCCCTTCCCAAGCCTTGCAAACCTGGTCATTaGGGAATTCCTTTCGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: GAKANNEVWEFPPPLPKPCKPGH*GIPFAG Trigger: ACCAGCGAAAGGAATTCCCCAATGACCAGGTTTGCA...AGGCTTGGGAAGGGGAGGTGGAAACTCCCAGACCTCATTGTTAGCCTTTGCCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105705.9 |
||
| CDS-3UTR CCA 90 bp | AGAAACTCCACACACAGGCAGCTGGGGGCAAAGGCTAACAATGAGGTCTGGGAGGCCTGGCTGCAAACCTaGTCATTGGGGAATTCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: RNSTHRQLGAKANNEVWEAWLQT*SLGNSF Trigger: AAAGGAATTCCCCAATGACCAGGTTTGCAGCCAGGC...CTCCCAGACCTCATTGTTAGCCTTTGCCCCCAGCTGCCTGTGTGTGGAGTTTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105705.9 |
||
| CDS-3UTR TCA 90 bp | GAGAGCGTACAGCAGCTGACCACCAGGCTAAGGACTGGCCAGCAGAGCCTTCTATCACGAAGTATTTCTTaGCCTGGTCATTGGGGAATT | + |
|
Preference number: 4 (lower is better) Translates to: ESVQQLTTRLRTGQQSLLSRSIS*PGHWGI Trigger: AATTCCCCAATGACCAGGTCAAGAAATACTTCGTGA...TAGAAGGCTCTGCTGGCCAGTCCTTAGCCTGGTGGTCAGCTGCTGTACGCTCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057907.10 ENSMUST00000129253.8 ENSMUST00000167160.8 |
||
| CDS-3UTR CCA 90 bp | GCAAAGGCTAACAATGAGGTCTGGGAGTTTCCACCTCCCCTTCCCAAGCCTGGCGGGAATTCCTTTCGCTaGTCTTTAGAGAGATCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: AKANNEVWEFPPPLPKPGGNSFR*SLERSS Trigger: AGAGGATCTCTCTAAAGACCAGCGAAAGGAATTCCC...GCCAGGCTTGGGAAGGGGAGGTGGAAACTCCCAGACCTCATTGTTAGCCTTTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000057907.10 ENSMUST00000105705.9 ENSMUST00000129253.8 ENSMUST00000167160.8 |
||
| CDS-3UTR CCA 90 bp | TGTATGTGTATAAACTATGCATGTGCTTGGTACCTGCAAAAGACCGAAGAGGGGATCACCGGGTCCGGCTaGAAGGTTCCCAGTGGTGCG | + |
|
Preference number: 4 (lower is better) Translates to: CMCINYACAWYLQKTEEGITGSG*KVPSGA Trigger: CGCACCACTGGGAACCTTCCAGCCGGACCCGGTGAT...CCCCTCTTCGGTCTTTTGCAGGTACCAAGCACATGCATAGTTTATACACATACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151127.8 |
||
| CDS-3UTR CCA 90 bp | GCCTGTCAGATATGTTGTCTGTCCCTGCTCTCCAGGGCCCTTGAGGAGAACAAGAAACCTCCCTCCACTTaGCATCGCTTTTCTGCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: ACQICCLSLLSRALEENKKPPST*HRFSAE Trigger: TTCAGCAGAAAAGCGATGCCAAGTGGAGGGAGGTTT...CTTGTTCTCCTCAAGGGCCCTGGAGAGCAGGGACAGACAACATATCTGACAGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057907.10 ENSMUST00000167160.8 |
||
| CDS-3UTR CCA 90 bp | GTTGCCAGGGTAGTTAGCCCTCACCCATTGCTGCTTCAGTTTCCCAACACTGGGTGGAGGCATCCTTTCTaGGAATTGCTTTTGGGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: VARVVSPHPLLLQFPNTGWRHPF*ELLLGW Trigger: CCAACCCAAAAGCAATTCCCAGAAAGGATGCCTCCA...CCCAGTGTTGGGAAACTGAAGCAGCAATGGGTGAGGGCTAACTACCCTGGCAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151127.8 |
||
| CDS-3UTR TCA 90 bp | GGTACCTGCAAAAGACCGAAGAGGGGATTTGAATCCCTTGGAACTGGAGTTACAAATACCCTTCAGCCTTaGGGTCCACCACCTGGGACT | + |
|
Preference number: 4 (lower is better) Translates to: GTCKRPKRGFESLGTGVTNTLQP*GPPPGT Trigger: AGTCCCAGGTGGTGGACCTCAAGGCTGAAGGGTATT...TGTAACTCCAGTTCCAAGGGATTCAAATCCCCTCTTCGGTCTTTTGCAGGTACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151127.8 |
||
| CDS-3UTR GCA 90 bp | ACTATGCATGTGCTTGGTACCTGCAAAAGACCGAAGAGGGGATTTGAATCCCTTTTCCCATGGGGTCCTTaGCCACATACCTCCCTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: TMHVLGTCKRPKRGFESLFPWGP*PHTSLH Trigger: GTGGAGGGAGGTATGTGGGCAAGGACCCCATGGGAA...AAGGGATTCAAATCCCCTCTTCGGTCTTTTGCAGGTACCAAGCACATGCATAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000151127.8 |
||
| CDS-3UTR CCA 90 bp | GAAACTCCACACACAGGCAGCTGGGGGCAAAGGCTAACAATGAGGTCTGGGAGTGGGAATTCCTTTCGCTaGTCTTTAGAGAGATCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: ETPHTGSWGQRLTMRSGSGNSFR*SLERSS Trigger: AGAGGATCTCTCTAAAGACCAGCGAAAGGAATTCCC...ACTCCCAGACCTCATTGTTAGCCTTTGCCCCCAGCTGCCTGTGTGTGGAGTTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000057907.10 ENSMUST00000105705.9 ENSMUST00000129253.8 ENSMUST00000167160.8 |
||
| CDS-3UTR CCA 90 bp | AGAAACTCCACACACAGGCAGCTGGGGGCAAAGGCTAACAATGAGGTCTGGGAGGGGAATTCCTTTCGCTaGTCTTTAGAGAGATCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: RNSTHRQLGAKANNEVWEGNSFR*SLERSS Trigger: AGAGGATCTCTCTAAAGACCAGCGAAAGGAATTCCC...CTCCCAGACCTCATTGTTAGCCTTTGCCCCCAGCTGCCTGTGTGTGGAGTTTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000057907.10 ENSMUST00000105705.9 ENSMUST00000129253.8 ENSMUST00000167160.8 |
||
| CDS-3UTR CCA 90 bp | ATCCTAGATCTGCCTTATGACATCATTAAAGGCAGTCCCCAAGCCTGTCAGATACTTGGACCCGCAGTCTaGCCTGGCTGCAAACCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: ILDLPYDIIKGSPQACQILGPAV*PGCKPV Trigger: GACTGGTTTGCAGCCAGGCCAGACTGCGGGTCCAAG...TATCTGACAGGCTTGGGGACTGCCTTTAATGATGTCATAAGGCAGATCTAGGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057907.10 ENSMUST00000129253.8 ENSMUST00000167160.8 |
||
| CDS-3UTR CCA 90 bp | GGTACCTGCAAAAGACCGAAGAGGGGATTTGAATCCCTTGGAACTGGAGTTACAGCTGACGACAGGAGTTaGACGCACAGCTGGTACTTG | + |
|
Preference number: 4 (lower is better) Translates to: GTCKRPKRGFESLGTGVTADDRS*THSWYL Trigger: CAAGTACCAGCTGTGCGTCCAACTCCTGTCGTCAGC...TGTAACTCCAGTTCCAAGGGATTCAAATCCCCTCTTCGGTCTTTTGCAGGTACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151127.8 |
||
| CDS-3UTR TCA 90 bp | GGTACCTGCAAAAGACCGAAGAGGGGATTTGAATCCCTTGGAACTGGAGTTACAGAGCTGGGATGTGGATaGACAGTTCCAGCAGGATGT | + |
|
Preference number: 4 (lower is better) Translates to: GTCKRPKRGFESLGTGVTELGCG*TVPAGC Trigger: ACATCCTGCTGGAACTGTTCATCCACATCCCAGCTC...TGTAACTCCAGTTCCAAGGGATTCAAATCCCCTCTTCGGTCTTTTGCAGGTACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151127.8 |
||
| CDS-3UTR TCA 90 bp | AGCGGACGCCGGGAGGATAGTTGGAGAATGTGTGTGAAACCCTGTAGAGCGACATCACGAAGTATTTCTTaGCCTGGTCATTGGGGAATT | + |
|
Preference number: 4 (lower is better) Translates to: SGRREDSWRMCVKPCRATSRSIS*PGHWGI Trigger: AATTCCCCAATGACCAGGTCAAGAAATACTTCGTGA...TGTCGCTCTACAGGGTTTCACACACATTCTCCAACTATCCTCCCGGCGTCCGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153703.8 |
||
| CDS-3UTR GCA 90 bp | GAGCCACCATATGGGTGGTATGATTTGAACCTGGCTCCTCTGAAGGAGCCAAAGATCCTTTCTGGGAATTaGTTTTGGGTTGGGGCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: EPPYGWYDLNLAPLKEPKILSGN*FWVGAL Trigger: GAGAGCCCCAACCCAAAAGCAATTCCCAGAAAGGAT...CTTTGGCTCCTTCAGAGGAGCCAGGTTCAAATCATACCACCCATATGGTGGCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151127.8 |
||
| CDS-3UTR CCA 90 bp | GTACCTGCAAAAGACCGAAGAGGGGATTTGAATCCCTTGGAACTGGAGTTACAGCAGCAGTTGGCGAGCTaGGATGTGGATGAACAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: VPAKDRRGDLNPLELELQQQLAS*DVDEQF Trigger: GAACTGTTCATCCACATCCCAGCTCGCCAACTGCTG...CTGTAACTCCAGTTCCAAGGGATTCAAATCCCCTCTTCGGTCTTTTGCAGGTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151127.8 |
||
| 3UTR CAA 72 bp | GTACCTGCAAAAGACCGAAGAGGGGATTTGAATCCCTaGGAACTGGAGTTACAGGTGGTTGTGAGCCACCAT | + |
|
Preference number: 4 (lower is better) Translates to: VPAKDRRGDLNP*ELELQVVVSHH Trigger: ATGGTGGCTCACAACCACCTGTAACTCCAGTTCCAAGGGATTCAAATCCCCTCTTCGGTCTTTTGCAGGTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151127.8 |
||
| CDS-3UTR CCA 90 bp | ATCCTAGATCTGCCTTATGACATCATTAAAGGCAGTCCCCAAGCCTGTCAGATAAGTTGGACGCACAGCTaGTACTTGGACCCGCAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: ILDLPYDIIKGSPQACQISWTHS*YLDPQS Trigger: AGACTGCGGGTCCAAGTACCAGCTGTGCGTCCAACT...TATCTGACAGGCTTGGGGACTGCCTTTAATGATGTCATAAGGCAGATCTAGGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057907.10 ENSMUST00000129253.8 ENSMUST00000167160.8 |
||
| CDS-3UTR CCA 90 bp | GGTACCTGCAAAAGACCGAAGAGGGGATTTGAATCCCTTGGAACTGGAGTTACAGCAATCGGTACACCATaGAGGCATCCTTTCTGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: GTCKRPKRGFESLGTGVTAIGTP*RHPFWE Trigger: TTCCCAGAAAGGATGCCTCCATGGTGTACCGATTGC...TGTAACTCCAGTTCCAAGGGATTCAAATCCCCTCTTCGGTCTTTTGCAGGTACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151127.8 |
||
| CDS-3UTR TCA 90 bp | TATGGGTGGTATGATTTGAACCTGGCTCCTCTGAAGGAGCCAAAGTATTATGAACCACCACCTGGGACTTaGGGCAGGTGTAATAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: YGWYDLNLAPLKEPKYYEPPPGT*GRCNRK Trigger: CTTCCTATTACACCTGCCTCAAGTCCCAGGTGGTGG...TTCATAATACTTTGGCTCCTTCAGAGGAGCCAGGTTCAAATCATACCACCCATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151127.8 |
||
| CDS-3UTR CCA 90 bp | TTGAACGTTTTTATTTTATTTCTCTGTGATACGGAGTTGAGCCAGCACATGCTACTTGGACCCGCAGTCTaGCCTGGCTGCAAACCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: LNVFILFLCDTELSQHMLLGPAV*PGCKPV Trigger: GACTGGTTTGCAGCCAGGCCAGACTGCGGGTCCAAG...TAGCATGTGCTGGCTCAACTCCGTATCACAGAGAAATAAAATAAAAACGTTCAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000151127.8 |
||
| CDS-3UTR CCA 90 bp | CTGGCTCCTCTGAAGGAGCCAAAGTATTATGAACTATTGAGGGCAGTCTTTAGGATACCTCCCTCCACTTaGCATCGCTTTTCTGCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: LAPLKEPKYYELLRAVFRIPPST*HRFSAE Trigger: TTCAGCAGAAAAGCGATGCCAAGTGGAGGGAGGTAT...CCTAAAGACTGCCCTCAATAGTTCATAATACTTTGGCTCCTTCAGAGGAGCCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151127.8 |
||
| 3UTR CAA 72 bp | ACAGGTGGTTGTGAGCCACCATATGGGTGGTATGATTaGAACCTGGCTCCTCTGAAGGAGCCAAAGTATTAT | + |
|
Preference number: 4 (lower is better) Translates to: TGGCEPPYGWYD*NLAPLKEPKYY Trigger: ATAATACTTTGGCTCCTTCAGAGGAGCCAGGTTCAAATCATACCACCCATATGGTGGCTCACAACCACCTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151127.8 |
||
| CDS-3UTR TCA 90 bp | GGTACCTGCAAAAGACCGAAGAGGGGATTTGAATCCCTTGGAACTGGAGTTACATCACGAAGTATTTCTTaGCCTGGTCATTGGGGAATT | + |
|
Preference number: 4 (lower is better) Translates to: GTCKRPKRGFESLGTGVTSRSIS*PGHWGI Trigger: AATTCCCCAATGACCAGGTCAAGAAATACTTCGTGA...TGTAACTCCAGTTCCAAGGGATTCAAATCCCCTCTTCGGTCTTTTGCAGGTACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000151127.8 |
||
| CDS-3UTR CCA 90 bp | ACTATGCATGTGCTTGGTACCTGCAAAAGACCGAAGAGGGGATTTGAATCCCTTGGGAATTCCTTTCGCTaGTCTTTAGAGAGATCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: TMHVLGTCKRPKRGFESLGNSFR*SLERSS Trigger: AGAGGATCTCTCTAAAGACCAGCGAAAGGAATTCCC...AAGGGATTCAAATCCCCTCTTCGGTCTTTTGCAGGTACCAAGCACATGCATAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151127.8 |
||
| 3UTR CAA 72 bp | TTGAACGTTTTTATTTTATTTCTCTGTGATACGGAGTaGAGCCAGCACATGCTAGGCAGGCGCTCTGCCACT | + |
|
Preference number: 4 (lower is better) Translates to: LNVFILFLCDTE*SQHMLGRRSAT Trigger: AGTGGCAGAGCGCCTGCCTAGCATGTGCTGGCTCAACTCCGTATCACAGAGAAATAAAATAAAAACGTTCAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000151127.8 |
||
| CDS-3UTR CCA 90 bp | TTGAACGTTTTTATTTTATTTCTCTGTGATACGGAGTTGAGCCAGCACATGCTATCTGGGAATTGCTTTTaGGTTGGGGCTCTCTCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: LNVFILFLCDTELSQHMLSGNCF*VGALSV Trigger: GACAGAGAGAGCCCCAACCCAAAAGCAATTCCCAGA...TAGCATGTGCTGGCTCAACTCCGTATCACAGAGAAATAAAATAAAAACGTTCAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000151127.8 |
||
| 3UTR CAA 72 bp | TTGCTGCTTCAGTTTCCCAACACTGGGCACTTCCGGTaGCACACCTTTAGTTTATTACATGTGTATGAATAT | + |
|
Preference number: 4 (lower is better) Translates to: LLLQFPNTGHFR*HTFSLLHVYEY Trigger: ATATTCATACACATGTAATAAACTAAAGGTGTGCAACCGGAAGTGCCCAGTGTTGGGAAACTGAAGCAGCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151127.8 |
||
| 3UTR CAA 72 bp | TTTGCCAGTATGTATGTGTATAAACTATGCATGTGCTaGGTACCTGCAAAAGACCGAAGAGGGGATTTGAAT | + |
|
Preference number: 4 (lower is better) Translates to: FASMYVYKLCMC*VPAKDRRGDLN Trigger: ATTCAAATCCCCTCTTCGGTCTTTTGCAGGTACCAAGCACATGCATAGTTTATACACATACATACTGGCAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151127.8 |
||
| CDS-3UTR CAA 90 bp | CCACCGATGGGGCTGGGGCATCTTCAAGCCACAGAGGACTTGGCCAGGTCCTTCACGCACAGCTGGTACTaGGACCCGCAGTCTGGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: PPMGLGHLQATEDLARSFTHSWY*DPQSGL Trigger: CAGGCCAGACTGCGGGTCCAAGTACCAGCTGTGCGT...GAAGGACCTGGCCAAGTCCTCTGTGGCTTGAAGATGCCCCAGCCCCATCGGTGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000057907.10 ENSMUST00000129253.8 ENSMUST00000167160.8 |
||
| CDS-3UTR CAA 90 bp | CCACGCCTCCGTGCTGAAACCAGATGTAGCGGACGCCGGGAGGATAGTTGGAGAACGCACAGCTGGTACTaGGACCCGCAGTCTGGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: PRLRAETRCSGRREDSWRTHSWY*DPQSGL Trigger: CAGGCCAGACTGCGGGTCCAAGTACCAGCTGTGCGT...TCTCCAACTATCCTCCCGGCGTCCGCTACATCTGGTTTCAGCACGGAGGCGTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129253.8 ENSMUST00000153703.8 |
||
| CDS CCA 90 bp | GGCCCAGGTTCCCATGGGGTCCTTGCCCACATACCTCCCTCCACTTaGCATCGCTTTTCTGCTGAATCATCACCGGGTCCGGCTGGAAGG | + |
|
Preference number: 5 (lower is better) Translates to: GPGSHGVLAHIPPST*HRFSAESSPGPAGR Trigger: CCTTCCAGCCGGACCCGGTGATGATTCAGCAGAAAAGCGATGCCAAGTGGAGGGAGGTATGTGGGCAAGGACCCCATGGGAACCTGGGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151127.8 |
||
| CDS-3UTR CAA 90 bp | ACCCCTCATCTGGCCTCTCATCCGGAGTCTTCTGGGGAGTCCTGCACTCATTGGACGCACAGCTGGTACTaGGACCCGCAGTCTGGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: TPHLASHPESSGESCTHWTHSWY*DPQSGL Trigger: CAGGCCAGACTGCGGGTCCAAGTACCAGCTGTGCGT...CCAATGAGTGCAGGACTCCCCAGAAGACTCCGGATGAGAGGCCAGATGAGGGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000057907.10 ENSMUST00000129253.8 ENSMUST00000167160.8 |
||
| CDS-3UTR CAA 90 bp | GGACGCACAGCTGGTACTTGGACCCGCAGTCTGGCCTGGCTGCAAACCAGTCCTTCCACCACCTGGGACTaGAGGCAGGTGCTGGTCATT | + |
|
Preference number: 5 (lower is better) Translates to: GRTAGTWTRSLAWLQTSPSTTWD*RQVLVI Trigger: AATGACCAGCACCTGCCTCAAGTCCCAGGTGGTGGA...AGGACTGGTTTGCAGCCAGGCCAGACTGCGGGTCCAAGTACCAGCTGTGCGTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172472.8 |
||
| CDS TCA 90 bp | AGGATCCTAGAGGGACCCTCCCTCCACTTGGCATCGCTTTTCTGCTaGATCATCACCGGGTCCGGCTGGAAGGTTCCCAGTGGTGCGTGG | + |
|
Preference number: 5 (lower is better) Translates to: RILEGPSLHLASLFC*IITGSGWKVPSGAW Trigger: CCACGCACCACTGGGAACCTTCCAGCCGGACCCGGTGATGATTCAGCAGAAAAGCGATGCCAAGTGGAGGGAGGGTCCCTCTAGGATCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129253.8 |
||
| CDS TCA 90 bp | GGTCCTTGCCCACATACCTCCCTCCACTTGGCATCGCTTTTCTGCTaGATCATCACCGGGTCCGGCTGGAAGGTTCCCAGTGGTGCGTGG | + |
|
Preference number: 5 (lower is better) Translates to: GPCPHTSLHLASLFC*IITGSGWKVPSGAW Trigger: CCACGCACCACTGGGAACCTTCCAGCCGGACCCGGTGATGATTCAGCAGAAAAGCGATGCCAAGTGGAGGGAGGTATGTGGGCAAGGACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151127.8 |
||
| CDS-3UTR CAA 90 bp | GCAGAGAGCGTACAGCAGCTGACCACCAGGCTAAGGACTGGCCAGCAGAGCCTTCAATACCCTTCAGCCTaGAGGTCCACCACCTGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: AESVQQLTTRLRTGQQSLQYPSA*RSTTWD Trigger: GTCCCAGGTGGTGGACCTCAAGGCTGAAGGGTATTG...AAGGCTCTGCTGGCCAGTCCTTAGCCTGGTGGTCAGCTGCTGTACGCTCTCTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057907.10 ENSMUST00000129253.8 ENSMUST00000167160.8 |
||
| CDS-3UTR CAA 90 bp | CCACGCCTCCGTGCTGAAACCAGATGTAGCGGACGCCGGGAGGATAGTTGGAGACAATACCCTTCAGCCTaGAGGTCCACCACCTGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: PRLRAETRCSGRREDSWRQYPSA*RSTTWD Trigger: GTCCCAGGTGGTGGACCTCAAGGCTGAAGGGTATTG...TCTCCAACTATCCTCCCGGCGTCCGCTACATCTGGTTTCAGCACGGAGGCGTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129253.8 ENSMUST00000153703.8 |
||
| CDS-3UTR CAA 90 bp | TGGGGGCAAAGGCTAACAATGAGGTCTGGGAGTTTCCACCTCCCCTTCCCAAGCACGCACAGCTGGTACTaGGACCCGCAGTCTGGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: WGQRLTMRSGSFHLPFPSTHSWY*DPQSGL Trigger: CAGGCCAGACTGCGGGTCCAAGTACCAGCTGTGCGT...GCTTGGGAAGGGGAGGTGGAAACTCCCAGACCTCATTGTTAGCCTTTGCCCCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000057907.10 ENSMUST00000105705.9 ENSMUST00000129253.8 ENSMUST00000167160.8 |
||
| CDS-3UTR CAA 90 bp | GACGCACAGCTGGTACTTGGACCCGCAGTCTGGCCTGGCTGCAAACCAGTCCTTTCCACCACCTGGGACTaGAGGCAGGTGCTTCCATTC | + |
|
Preference number: 5 (lower is better) Translates to: DAQLVLGPAVWPGCKPVLSTTWD*RQVLPF Trigger: GAATGGAAGCACCTGCCTCAAGTCCCAGGTGGTGGA...AAGGACTGGTTTGCAGCCAGGCCAGACTGCGGGTCCAAGTACCAGCTGTGCGTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122913.3 |
||
| CDS-3UTR CAA 90 bp | GAGTGTCCACGCCTCCGTGCTGAAACCAGATGTAGCGGACGCCGGGAGGATAGTGGCAGGTGCTGGTCATaGGGGAATTCCTTTCGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: ECPRLRAETRCSGRREDSGRCWS*GNSFRW Trigger: CCAGCGAAAGGAATTCCCCAATGACCAGCACCTGCC...ACTATCCTCCCGGCGTCCGCTACATCTGGTTTCAGCACGGAGGCGTGGACACTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172472.8 |
||
| CDS-3UTR CAA 90 bp | TCTCGGGCCGTACCAGCCGGCCCAGTAGTGAGTGTCCACGCCTCCGTGCTGAAATTCTTGACCTGGTCATaGGGGAATTCCTTTCGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: SRAVPAGPVVSVHASVLKFLTWS*GNSFRW Trigger: CCAGCGAAAGGAATTCCCCAATGACCAGGTCAAGAA...TTTCAGCACGGAGGCGTGGACACTCACTACTGGGCCGGCTGGTACGGCCCGAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129253.8 ENSMUST00000153703.8 |
||
| CDS-3UTR CAA 90 bp | AGCGGACGCCGGGAGGATAGTTGGAGAATGTGTGTGAAACCCTGTAGAGCGACAACGCACAGCTGGTACTaGGACCCGCAGTCTGGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: SGRREDSWRMCVKPCRATTHSWY*DPQSGL Trigger: CAGGCCAGACTGCGGGTCCAAGTACCAGCTGTGCGT...TGTCGCTCTACAGGGTTTCACACACATTCTCCAACTATCCTCCCGGCGTCCGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153703.8 |
||
| CDS-3UTR CAA 90 bp | CTCCGTGCTGAAACCAGATGTAGCGGACGCCGGGAGGATAGTTGGAGAATGTGTCAATACCCTTCAGCCTaGAGGTCCACCACCTGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: LRAETRCSGRREDSWRMCQYPSA*RSTTWD Trigger: GTCCCAGGTGGTGGACCTCAAGGCTGAAGGGTATTG...ACACATTCTCCAACTATCCTCCCGGCGTCCGCTACATCTGGTTTCAGCACGGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129253.8 ENSMUST00000153703.8 |
||
| CDS-3UTR CAA 90 bp | CCTGTCAGATATGTTGTCTGTCCCTGCTCTCCAGGGCCCTTGAGGAGAACAAGGCAATACCCTTCAGCCTaGAGGTCCACCACCTGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: PVRYVVCPCSPGPLRRTRQYPSA*RSTTWD Trigger: GTCCCAGGTGGTGGACCTCAAGGCTGAAGGGTATTG...CCTTGTTCTCCTCAAGGGCCCTGGAGAGCAGGGACAGACAACATATCTGACAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057907.10 ENSMUST00000129253.8 ENSMUST00000167160.8 |
||
| CDS-3UTR CAA 90 bp | AGAAACTCCACACACAGGCAGCTGGGGGCAAAGGCTAACAATGAGGTCTGGGAGCTGCAAACCTGGTCATaGGGGAATTCCTTTCGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: RNSTHRQLGAKANNEVWELQTWS*GNSFRW Trigger: CCAGCGAAAGGAATTCCCCAATGACCAGGTTTGCAG...CTCCCAGACCTCATTGTTAGCCTTTGCCCCCAGCTGCCTGTGTGTGGAGTTTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105705.9 |
||
| CDS CCA 90 bp | AGGCAATCGGTACACCATGGAGGCATCCTTTCTGGGAATTGCTTTTaGGTTGGGGCTCTCTCTGTCTCCCGACTCTGTTGTCTAAGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: RQSVHHGGILSGNCF*VGALSVSRLCCLSW Trigger: CCAGCTTAGACAACAGAGTCGGGAGACAGAGAGAGCCCCAACCCAAAAGCAATTCCCAGAAAGGATGCCTCCATGGTGTACCGATTGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151127.8 |
||
| CDS-3UTR CAA 90 bp | ATGGGGCTGGGGCATCTTCAAGCCACAGAGGACTTGGCCAGGTCCTTCCACTCAGTCACGAAGTATTTCTaGACCTGGTCATTGGGGAAT | + |
|
Preference number: 5 (lower is better) Translates to: MGLGHLQATEDLARSFHSVTKYF*TWSLGN Trigger: ATTCCCCAATGACCAGGTCAAGAAATACTTCGTGAC...TGAGTGGAAGGACCTGGCCAAGTCCTCTGTGGCTTGAAGATGCCCCAGCCCCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000057907.10 ENSMUST00000129253.8 ENSMUST00000167160.8 |
||
| CDS-3UTR CAA 90 bp | CCTGCAAAAGACCGAAGAGGGGATTTGAATCCCTTGGAACTGGAGTTACAGGTGCAATACCCTTCAGCCTaGAGGTCCACCACCTGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: PAKDRRGDLNPLELELQVQYPSA*RSTTWD Trigger: GTCCCAGGTGGTGGACCTCAAGGCTGAAGGGTATTG...CACCTGTAACTCCAGTTCCAAGGGATTCAAATCCCCTCTTCGGTCTTTTGCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151127.8 |
||
| CDS-3UTR CAA 90 bp | TGCTTCAGTTTCCCAACACTGGGCACTTCCGGTTGCACACCTTTAGTTTATTACACGCACAGCTGGTACTaGGACCCGCAGTCTGGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: CFSFPTLGTSGCTPLVYYTHSWY*DPQSGL Trigger: CAGGCCAGACTGCGGGTCCAAGTACCAGCTGTGCGT...GTAATAAACTAAAGGTGTGCAACCGGAAGTGCCCAGTGTTGGGAAACTGAAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151127.8 |
||
| CDS-3UTR CAA 90 bp | GTTGCCAGGGTAGTTAGCCCTCACCCATTGCTGCTTCAGTTTCCCAACACTGGGCATCCTTTCTGGGAATaGCTTTTGGGTTGGGGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: VARVVSPHPLLLQFPNTGHPFWE*LLGWGS Trigger: AGAGCCCCAACCCAAAAGCAATTCCCAGAAAGGATG...CCCAGTGTTGGGAAACTGAAGCAGCAATGGGTGAGGGCTAACTACCCTGGCAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151127.8 |
||
| CDS GCA 90 bp | CTAGCTAGGCAATCGGTACACCATGGAGGCATCCTTTCTGGGAATTaGTTTTGGGTTGGGGCTCTCTCTGTCTCCCGACTCTGTTGTCTA | + |
|
Preference number: 5 (lower is better) Translates to: LARQSVHHGGILSGN*FWVGALSVSRLCCL Trigger: TAGACAACAGAGTCGGGAGACAGAGAGAGCCCCAACCCAAAAGCAATTCCCAGAAAGGATGCCTCCATGGTGTACCGATTGCCTAGCTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151127.8 |
||
| CDS CCA 90 bp | AGTCTGGCCTGGCTGCAAACCTGGTCATTGGGGAATTCCTTTCGCTaGTCTTTAGAGAGATCCTCTACCTTCCATTCATCGCCTCCGTTC | + |
|
Preference number: 5 (lower is better) Translates to: SLAWLQTWSLGNSFR*SLERSSTFHSSPPF Trigger: GAACGGAGGCGATGAATGGAAGGTAGAGGATCTCTCTAAAGACCAGCGAAAGGAATTCCCCAATGACCAGGTTTGCAGCCAGGCCAGACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105705.9 |
||
| CDS CCA 90 bp | ATCGGTACACCATGGAGGCATCCTTTCTGGGAATTGCTTTTGGGTTaGGGCTCTCTCTGTCTCCCGACTCTGTTGTCTAAGCTGGAAGCT | + |
|
Preference number: 5 (lower is better) Translates to: IGTPWRHPFWELLLG*GSLCLPTLLSKLEA Trigger: AGCTTCCAGCTTAGACAACAGAGTCGGGAGACAGAGAGAGCCCCAACCCAAAAGCAATTCCCAGAAAGGATGCCTCCATGGTGTACCGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151127.8 |
||
| CDS-3UTR CAA 90 bp | AGATATGTTGTCTGTCCCTGCTCTCCAGGGCCCTTGAGGAGAACAAGGAGAGAGTTCTTGACCTGGTCATaGGGGAATTCCTTTCGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: RYVVCPCSPGPLRRTRREFLTWS*GNSFRW Trigger: CCAGCGAAAGGAATTCCCCAATGACCAGGTCAAGAA...CTCTCTCCTTGTTCTCCTCAAGGGCCCTGGAGAGCAGGGACAGACAACATATCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057907.10 ENSMUST00000129253.8 ENSMUST00000167160.8 |
||
| CDS-3UTR CAA 90 bp | ATTAAAGGCAGTCCCCAAGCCTGTCAGATATGTTGTCTGTCCCTGCTCTCCAGGTTCTTGACCTGGTCATaGGGGAATTCCTTTCGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: IKGSPQACQICCLSLLSRFLTWS*GNSFRW Trigger: CCAGCGAAAGGAATTCCCCAATGACCAGGTCAAGAA...CCTGGAGAGCAGGGACAGACAACATATCTGACAGGCTTGGGGACTGCCTTTAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000057907.10 ENSMUST00000129253.8 ENSMUST00000167160.8 |
||
| CDS CCA 90 bp | TTTTGGGTTGGGGCTCTCTCTGTCTCCCGACTCTGTTGTCTAAGCTaGAAGCTTACTCCTATTCTTCTACTAAAGCAAGTGAGGCCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: FWVGALSVSRLCCLS*KLTPILLLKQVRPR Trigger: CCTGGGCCTCACTTGCTTTAGTAGAAGAATAGGAGTAAGCTTCCAGCTTAGACAACAGAGTCGGGAGACAGAGAGAGCCCCAACCCAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151127.8 |
||
| CDS-3UTR CAA 90 bp | AAGAGGGGATTTGAATCCCTTGGAACTGGAGTTACAGGTGGTTGTGAGCCACCATTCTTGACCTGGTCATaGGGGAATTCCTTTCGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: KRGFESLGTGVTGGCEPPFLTWS*GNSFRW Trigger: CCAGCGAAAGGAATTCCCCAATGACCAGGTCAAGAA...TGGTGGCTCACAACCACCTGTAACTCCAGTTCCAAGGGATTCAAATCCCCTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151127.8 |
||
| CDS-3UTR CAA 90 bp | AAGAGGGGATTTGAATCCCTTGGAACTGGAGTTACAGGTGGTTGTGAGCCACCATTCTGGGAATTGCTTTaGGGTTGGGGCTCTCTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: KRGFESLGTGVTGGCEPPFWELL*GWGSLC Trigger: ACAGAGAGAGCCCCAACCCAAAAGCAATTCCCAGAA...TGGTGGCTCACAACCACCTGTAACTCCAGTTCCAAGGGATTCAAATCCCCTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151127.8 |
||
| CDS CCA 90 bp | GTCACGAAGTATTTCTTGACCTGGTCATTGGGGAATTCCTTTCGCTaGTCTTTAGAGAGATCCTCTACCTTCCATTCATCGCCTCCGTTC | + |
|
Preference number: 5 (lower is better) Translates to: VTKYFLTWSLGNSFR*SLERSSTFHSSPPF Trigger: GAACGGAGGCGATGAATGGAAGGTAGAGGATCTCTCTAAAGACCAGCGAAAGGAATTCCCCAATGACCAGGTCAAGAAATACTTCGTGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000057907.10 ENSMUST00000129253.8 ENSMUST00000151127.8 ENSMUST00000151246.8 ENSMUST00000153703.8 ENSMUST00000167160.8 ENSMUST00000173352.2 |
||
| CDS CCA 72 bp | GGGCTGACGACAGGAGTTGGACGCACAGCTGGTACTTaGACCCGCAGTCTGGCCTGGCTGCAAACCTGGTCA | + |
|
Preference number: 6 (lower is better) Translates to: GLTTGVGRTAGT*TRSLAWLQTWS Trigger: TGACCAGGTTTGCAGCCAGGCCAGACTGCGGGTCCAAGTACCAGCTGTGCGTCCAACTCCTGTCGTCAGCCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105705.9 |
||
| CDS TCA 72 bp | GAGGGACCCTCCCTCCACTTGGCATCGCTTTTCTGCTaGATCATCACCGGGTCCGGCTGGAAGGTTCCCAGT | + |
|
Preference number: 6 (lower is better) Translates to: EGPSLHLASLFC*IITGSGWKVPS Trigger: ACTGGGAACCTTCCAGCCGGACCCGGTGATGATTCAGCAGAAAAGCGATGCCAAGTGGAGGGAGGGTCCCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129253.8 |
||
| CDS CCA 72 bp | GGACGCACAGCTGGTACTTGGACCCGCAGTCTGGCCTaGCTGCAAACCTGGTCATTGGGGAATTCCTTTCGC | + |
|
Preference number: 6 (lower is better) Translates to: GRTAGTWTRSLA*LQTWSLGNSFR Trigger: GCGAAAGGAATTCCCCAATGACCAGGTTTGCAGCCAGGCCAGACTGCGGGTCCAAGTACCAGCTGTGCGTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105705.9 |
||
| CDS TCA 72 bp | CCACATACCTCCCTCCACTTGGCATCGCTTTTCTGCTaGATCATCACCGGGTCCGGCTGGAAGGTTCCCAGT | + |
|
Preference number: 6 (lower is better) Translates to: PHTSLHLASLFC*IITGSGWKVPS Trigger: ACTGGGAACCTTCCAGCCGGACCCGGTGATGATTCAGCAGAAAAGCGATGCCAAGTGGAGGGAGGTATGTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151127.8 |
||
| CDS TCA 72 bp | ATGAGACCCTCCCTCCACTTGGCATCGCTTTTCTGCTaGATCATCACCGGGTCCGGCTGGAAGGTTCCCAGT | + |
|
Preference number: 6 (lower is better) Translates to: MRPSLHLASLFC*IITGSGWKVPS Trigger: ACTGGGAACCTTCCAGCCGGACCCGGTGATGATTCAGCAGAAAAGCGATGCCAAGTGGAGGGAGGGTCTCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153703.8 |
||
| CDS CAA 72 bp | ACTAAAGCAAGTGAGGCCCAGGTTCCCATGGGGTCCTaGCCCACATACCTCCCTCCACTTGGCATCGCTTTT | + |
|
Preference number: 6 (lower is better) Translates to: TKASEAQVPMGS*PTYLPPLGIAF Trigger: AAAAGCGATGCCAAGTGGAGGGAGGTATGTGGGCAAGGACCCCATGGGAACCTGGGCCTCACTTGCTTTAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151127.8 |
||
| CDS GCA 72 bp | CAATCGGTACACCATGGAGGCATCCTTTCTGGGAATTaGTTTTGGGTTGGGGCTCTCTCTGTCTCCCGACTC | + |
|
Preference number: 6 (lower is better) Translates to: QSVHHGGILSGN*FWVGALSVSRL Trigger: GAGTCGGGAGACAGAGAGAGCCCCAACCCAAAAGCAATTCCCAGAAAGGATGCCTCCATGGTGTACCGATTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151127.8 |
||
| CDS CAA 72 bp | GGTACACCATGGAGGCATCCTTTCTGGGAATTGCTTTaGGGTTGGGGCTCTCTCTGTCTCCCGACTCTGTTG | + |
|
Preference number: 6 (lower is better) Translates to: GTPWRHPFWELL*GWGSLCLPTLL Trigger: CAACAGAGTCGGGAGACAGAGAGAGCCCCAACCCAAAAGCAATTCCCAGAAAGGATGCCTCCATGGTGTACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151127.8 |
||
| CDS CCA 72 bp | CCATGGAGGCATCCTTTCTGGGAATTGCTTTTGGGTTaGGGCTCTCTCTGTCTCCCGACTCTGTTGTCTAAG | + |
|
Preference number: 6 (lower is better) Translates to: PWRHPFWELLLG*GSLCLPTLLSK Trigger: CTTAGACAACAGAGTCGGGAGACAGAGAGAGCCCCAACCCAAAAGCAATTCCCAGAAAGGATGCCTCCATGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151127.8 |
||
| CDS CCA 72 bp | GTACACCATGGAGGCATCCTTTCTGGGAATTGCTTTTaGGTTGGGGCTCTCTCTGTCTCCCGACTCTGTTGT | + |
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Preference number: 6 (lower is better) Translates to: VHHGGILSGNCF*VGALSVSRLCC Trigger: ACAACAGAGTCGGGAGACAGAGAGAGCCCCAACCCAAAAGCAATTCCCAGAAAGGATGCCTCCATGGTGTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151127.8 |
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| CDS CCA 72 bp | TGGCTGCAAACCTGGTCATTGGGGAATTCCTTTCGCTaGTCTTTAGAGAGATCCTCTACCTTCCATTCATCG | + |
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Preference number: 6 (lower is better) Translates to: WLQTWSLGNSFR*SLERSSTFHSS Trigger: CGATGAATGGAAGGTAGAGGATCTCTCTAAAGACCAGCGAAAGGAATTCCCCAATGACCAGGTTTGCAGCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105705.9 |
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| CDS CCA 72 bp | GGGGCTCTCTCTGTCTCCCGACTCTGTTGTCTAAGCTaGAAGCTTACTCCTATTCTTCTACTAAAGCAAGTG | + |
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Preference number: 6 (lower is better) Translates to: GALSVSRLCCLS*KLTPILLLKQV Trigger: CACTTGCTTTAGTAGAAGAATAGGAGTAAGCTTCCAGCTTAGACAACAGAGTCGGGAGACAGAGAGAGCCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151127.8 |
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| CDS CAA 72 bp | CTTTTGGGTTGGGGCTCTCTCTGTCTCCCGACTCTGTaGTCTAAGCTGGAAGCTTACTCCTATTCTTCTACT | + |
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Preference number: 6 (lower is better) Translates to: LLGWGSLCLPTL*SKLEAYSYSST Trigger: AGTAGAAGAATAGGAGTAAGCTTCCAGCTTAGACAACAGAGTCGGGAGACAGAGAGAGCCCCAACCCAAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151127.8 |
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| CDS CAA 90 bp | TGGGAATTGCTTTTGGGTTGGGGCTCTCTCTGTCTCCCGACTCTGTaGTCTAAGCTGGAAGCTTACTCCTATTCTTCTACTAAAGCAAGT | + |
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Preference number: 6 (lower is better) Translates to: WELLLGWGSLCLPTL*SKLEAYSYSSTKAS Trigger: ACTTGCTTTAGTAGAAGAATAGGAGTAAGCTTCCAGCTTAGACAACAGAGTCGGGAGACAGAGAGAGCCCCAACCCAAAAGCAATTCCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151127.8 |
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| CDS CCA 72 bp | TATTTCTTGACCTGGTCATTGGGGAATTCCTTTCGCTaGTCTTTAGAGAGATCCTCTACCTTCCATTCATCG | + |
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Preference number: 6 (lower is better) Translates to: YFLTWSLGNSFR*SLERSSTFHSS Trigger: CGATGAATGGAAGGTAGAGGATCTCTCTAAAGACCAGCGAAAGGAATTCCCCAATGACCAGGTCAAGAAATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000057907.10 ENSMUST00000129253.8 ENSMUST00000151127.8 ENSMUST00000151246.8 ENSMUST00000153703.8 ENSMUST00000167160.8 ENSMUST00000173352.2 |
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