RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FBXO42 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000028920

Ensembl transcript IDs: ENSMUST00000030757.10

Found 248 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CTGGCCATGAGCCAGACGAGCCGCAGCAGGCTCGTGCCTGGGAGATaGGGGGACAGGGGAATGGGAGACTGCCGCTGGGAAACACGCTGC +
Preference number: 1 (lower is better)
Translates to: LAMSQTSRSRLVPGR*GDRGMGDCRWETRC
Trigger: GCAGCGTGTTTCCCAGCGGCAGTCTCCCATTCCCCTGTCCCCGCATCTCCCAGGCACGAGCCTGCTGCGGCTCGTCTGGCTCATGGCCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
3UTR TCA 90 bp CTCACAGCACCAGCTTTGTCAGGGCACGGTGGGCGTGCACCGACGTaGGCCCTGGTTGGTAGGAGGGGGCAGAGCGAGCACAGTGGAGCC +
Preference number: 1 (lower is better)
Translates to: LTAPALSGHGGRAPT*ALVGRRGQSEHSGA
Trigger: GGCTCCACTGTGCTCGCTCTGCCCCCTCCTACCAACCAGGGCTCACGTCGGTGCACGCCCACCGTGCCCTGACAAAGCTGGTGCTGTGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
3UTR CCA 90 bp CACCAGCTTTGTCAGGGCACGGTGGGCGTGCACCGACGTGAGCCCTaGTTGGTAGGAGGGGGCAGAGCGAGCACAGTGGAGCCAGAGGTT +
Preference number: 1 (lower is better)
Translates to: HQLCQGTVGVHRREP*LVGGGRASTVEPEV
Trigger: AACCTCTGGCTCCACTGTGCTCGCTCTGCCCCCTCCTACCAACCAGGGCTCACGTCGGTGCACGCCCACCGTGCCCTGACAAAGCTGGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
3UTR CCA 90 bp CGAGCCGCAGCAGGCTCGTGCCTGGGAGATGCGGGGACAGGGGAATaGGAGACTGCCGCTGGGAAACACGCTGCTGTCCTTTCAATTTCA +
Preference number: 1 (lower is better)
Translates to: RAAAGSCLGDAGTGE*ETAAGKHAAVLSIS
Trigger: TGAAATTGAAAGGACAGCAGCGTGTTTCCCAGCGGCAGTCTCCCATTCCCCTGTCCCCGCATCTCCCAGGCACGAGCCTGCTGCGGCTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
3UTR CCA 90 bp CTGGTTGGTAGGAGGGGGCAGAGCGAGCACAGTGGAGCCAGAGGTTaGCTTTCATTCCCAAGGATGGGGCTGCTGAGAGGCCACCTGCAG +
Preference number: 1 (lower is better)
Translates to: LVGRRGQSEHSGARG*LSFPRMGLLRGHLQ
Trigger: CTGCAGGTGGCCTCTCAGCAGCCCCATCCTTGGGAATGAAAGCCAACCTCTGGCTCCACTGTGCTCGCTCTGCCCCCTCCTACCAACCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
3UTR TCA 90 bp GAGCGCCCCCTCGTCCCACTGCGGCGGCTGTCTGTCTTTCCAGGCTaGGCCTCCTGCAATCCTGCCTTCTCTCCTCTTCTTAAGTTAGGG +
Preference number: 1 (lower is better)
Translates to: ERPLVPLRRLSVFPG*ASCNPAFSPLLKLG
Trigger: CCCTAACTTAAGAAGAGGAGAGAAGGCAGGATTGCAGGAGGCTCAGCCTGGAAAGACAGACAGCCGCCGCAGTGGGACGAGGGGGCGCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
3UTR TCA 90 bp CTCAGGCTAAGCCCAAACCTGAAGTCATCCTGCCTCTGTCTGCCCTaGGTGCTAGGACACAGGCGTGCACCAGCACACTGTGGTGGGTCC +
Preference number: 1 (lower is better)
Translates to: LRLSPNLKSSCLCLP*VLGHRRAPAHCGGS
Trigger: GGACCCACCACAGTGTGCTGGTGCACGCCTGTGTCCTAGCACTCAGGGCAGACAGAGGCAGGATGACTTCAGGTTTGGGCTTAGCCTGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
3UTR GCA 90 bp GCTCTCTGCCGCACACTATGTGGCATGCATGACCAGGAAGCTCTGTaGAGGAGCAGAGCAGCGCCCAGAACTCTCACAGGCCAACCAAAT +
Preference number: 1 (lower is better)
Translates to: ALCRTLCGMHDQEAL*RSRAAPRTLTGQPN
Trigger: ATTTGGTTGGCCTGTGAGAGTTCTGGGCGCTGCTCTGCTCCTGCACAGAGCTTCCTGGTCATGCATGCCACATAGTGTGCGGCAGAGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
3UTR TCA 90 bp TTTCAGCATGACTCCAGCACGTGGGGAACAGGGTTTCCTGTTGGGTaGCTTCTCTGGATCACAGAGGACAGAAGGGACCAGGCACAGGGC +
Preference number: 1 (lower is better)
Translates to: FQHDSSTWGTGFPVG*LLWITEDRRDQAQG
Trigger: GCCCTGTGCCTGGTCCCTTCTGTCCTCTGTGATCCAGAGAAGTCACCCAACAGGAAACCCTGTTCCCCACGTGCTGGAGTCATGCTGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
3UTR CCA 90 bp GAGAAGGCCACAGAAAGCTCACAGGGGCGCTTCTTCAGCTTCCTGTaGGAAGTTACTGCGGTCTCTCCCCTTACTTCCCGGTCTAGTCAG +
Preference number: 1 (lower is better)
Translates to: EKATESSQGRFFSFL*EVTAVSPLTSRSSQ
Trigger: CTGACTAGACCGGGAAGTAAGGGGAGAGACCGCAGTAACTTCCCACAGGAAGCTGAAGAAGCGCCCCTGTGAGCTTTCTGTGGCCTTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
3UTR CCA 90 bp CCAGTTTCCTTCTACCTTACTGGTGCTCCCAAAACACGGGGCAGGTaGGGTTGTGGAGCCCTCGTCCCAAACAAGGAAGAAAGGCAGCAA +
Preference number: 1 (lower is better)
Translates to: PVSFYLTGAPKTRGR*GCGALVPNKEERQQ
Trigger: TTGCTGCCTTTCTTCCTTGTTTGGGACGAGGGCTCCACAACCCCACCTGCCCCGTGTTTTGGGAGCACCAGTAAGGTAGAAGGAAACTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
3UTR TCA 90 bp TGTGGAGCCCTCGTCCCAAACAAGGAAGAAAGGCAGCAACAGGAGTaGGAAACGAATGCTCTCTGCCGCACACTATGTGGCATGCATGAC +
Preference number: 1 (lower is better)
Translates to: CGALVPNKEERQQQE*ETNALCRTLCGMHD
Trigger: GTCATGCATGCCACATAGTGTGCGGCAGAGAGCATTCGTTTCTCACTCCTGTTGCTGCCTTTCTTCCTTGTTTGGGACGAGGGCTCCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
3UTR TCA 90 bp AACCAACCAACCCCTCTCCTGGTTGGCTGCACCTCTTCTAGGAAATaGAGTGAAGGCAGCAAGGAAAGCTCTGCTTTGGGGGACACAAGA +
Preference number: 1 (lower is better)
Translates to: NQPTPLLVGCTSSRK*SEGSKESSALGDTR
Trigger: TCTTGTGTCCCCCAAAGCAGAGCTTTCCTTGCTGCCTTCACTTCATTTCCTAGAAGAGGTGCAGCCAACCAGGAGAGGGGTTGGTTGGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
3UTR CCA 90 bp CCTCTTCTAGGAAATGAAGTGAAGGCAGCAAGGAAAGCTCTGCTTTaGGGGACACAAGAAAAAGACGACACAGCACTGCACAGCACAGAG +
Preference number: 1 (lower is better)
Translates to: PLLGNEVKAARKALL*GTQEKDDTALHSTE
Trigger: CTCTGTGCTGTGCAGTGCTGTGTCGTCTTTTTCTTGTGTCCCCCAAAGCAGAGCTTTCCTTGCTGCCTTCACTTCATTTCCTAGAAGAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
3UTR TCA 90 bp CCACAGTTCATGCTTTCAGTTCTCGCCAGAGCTCAGACATTAAAATaGGAAGGCTGGCAGGGCAAGCCCAGCATTGCCTTCAACAAAACT +
Preference number: 1 (lower is better)
Translates to: PQFMLSVLARAQTLK*EGWQGKPSIAFNKT
Trigger: AGTTTTGTTGAAGGCAATGCTGGGCTTGCCCTGCCAGCCTTCTCATTTTAATGTCTGAGCTCTGGCGAGAACTGAAAGCATGAACTGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
3UTR CCA 90 bp TCTATGAACAAACAAACCAACCAACCAACCAACCAACCCCTCTCCTaGTTGGCTGCACCTCTTCTAGGAAATGAAGTGAAGGCAGCAAGG +
Preference number: 1 (lower is better)
Translates to: SMNKQTNQPTNQPLS*LAAPLLGNEVKAAR
Trigger: CCTTGCTGCCTTCACTTCATTTCCTAGAAGAGGTGCAGCCAACCAGGAGAGGGGTTGGTTGGTTGGTTGGTTGGTTTGTTTGTTCATAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
3UTR GCA 90 bp CTGGAGCAAGTTAGGCATGGAATTGGAGTTTTGGTTTATGGGAGTTaGATTGTTTTCCCAAGTCTCAGTCCAAATGTTTGCACACTGGAA +
Preference number: 1 (lower is better)
Translates to: LEQVRHGIGVLVYGS*IVFPSLSPNVCTLE
Trigger: TTCCAGTGTGCAAACATTTGGACTGAGACTTGGGAAAACAATGCAACTCCCATAAACCAAAACTCCAATTCCATGCCTAACTTGCTCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
3UTR GCA 90 bp GTTTATGGGAGTTGCATTGTTTTCCCAAGTCTCAGTCCAAATGTTTaGACACTGGAAAATTCCAAATTAAAGGACACAGAAGGGAAGGGG +
Preference number: 1 (lower is better)
Translates to: VYGSCIVFPSLSPNV*TLENSKLKDTEGKG
Trigger: CCCCTTCCCTTCTGTGTCCTTTAATTTGGAATTTTCCAGTGTGCAAACATTTGGACTGAGACTTGGGAAAACAATGCAACTCCCATAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
3UTR CAA 90 bp CAGCTTTGTCAGGGCACGGTGGGCGTGCACCGACGTGAGCCCTGGTaGGTAGGAGGGGGCAGAGCGAGCACAGTGGAGCCAGAGGTTGGC +
Preference number: 2 (lower is better)
Translates to: QLCQGTVGVHRREPW*VGGGRASTVEPEVG
Trigger: GCCAACCTCTGGCTCCACTGTGCTCGCTCTGCCCCCTCCTACCAACCAGGGCTCACGTCGGTGCACGCCCACCGTGCCCTGACAAAGCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
3UTR-3UTR TCA 90 bp CGTGCCTGGGAGATGCGGGGACAGGGGAATGGGAGACTGCCGCTGGGAAACACGTGGGTCCTCTGTGGCTaGCAGGAGGCGGGGAAGAGC +
Preference number: 2 (lower is better)
Translates to: RAWEMRGQGNGRLPLGNTWVLCG*QEAGKS
Trigger: GCTCTTCCCCGCCTCCTGTCAGCCACAGAGGACCCA...CGTGTTTCCCAGCGGCAGTCTCCCATTCCCCTGTCCCCGCATCTCCCAGGCACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
3UTR-3UTR TCA 90 bp GCCGCAGCAGGCTCGTGCCTGGGAGATGCGGGGACAGGGGAATGGGAGACTGCCGGGTTTCCTGTTGGGTaGCTTCTCTGGATCACAGAG +
Preference number: 2 (lower is better)
Translates to: AAAGSCLGDAGTGEWETAGFPVG*LLWITE
Trigger: CTCTGTGATCCAGAGAAGTCACCCAACAGGAAACCC...GGCAGTCTCCCATTCCCCTGTCCCCGCATCTCCCAGGCACGAGCCTGCTGCGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
3UTR-3UTR TCA 90 bp TCCCACTGCGGCGGCTGTCTGTCTTTCCAGGCTGAGCCTCCTGCAATCCTGCCTACGCTTGTCGGAAGGTaGGTGCTGGCCATGAGCCAG +
Preference number: 2 (lower is better)
Translates to: SHCGGCLSFQAEPPAILPTLVGR*VLAMSQ
Trigger: CTGGCTCATGGCCAGCACTCACCTTCCGACAAGCGT...AGGCAGGATTGCAGGAGGCTCAGCCTGGAAAGACAGACAGCCGCCGCAGTGGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
3UTR-3UTR CCA 90 bp AGGAGGGGGCAGAGCGAGCACAGTGGAGCCAGAGGTTGGCTTTCATTCCCAAGGAGGCAGCTGGAGCAGTaGGACACACAGGAAGTAGGC +
Preference number: 2 (lower is better)
Translates to: RRGQSEHSGARGWLSFPRRQLEQ*DTQEVG
Trigger: GCCTACTTCCTGTGTGTCCCACTGCTCCAGCTGCCT...CCTTGGGAATGAAAGCCAACCTCTGGCTCCACTGTGCTCGCTCTGCCCCCTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
3UTR-3UTR GCA 90 bp TCCCACTGCGGCGGCTGTCTGTCTTTCCAGGCTGAGCCTCCTGCAATCCTGCCTCCTGTGGGAAGTTACTaGGGTCTCTCCCCTTACTTC +
Preference number: 2 (lower is better)
Translates to: SHCGGCLSFQAEPPAILPPVGSY*GLSPYF
Trigger: GAAGTAAGGGGAGAGACCGCAGTAACTTCCCACAGG...AGGCAGGATTGCAGGAGGCTCAGCCTGGAAAGACAGACAGCCGCCGCAGTGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
3UTR-3UTR CCA 90 bp CGTGCCTGGGAGATGCGGGGACAGGGGAATGGGAGACTGCCGCTGGGAAACACGTTCTTCAGCTTCCTGTaGGAAGTTACTGCGGTCTCT +
Preference number: 2 (lower is better)
Translates to: RAWEMRGQGNGRLPLGNTFFSFL*EVTAVS
Trigger: AGAGACCGCAGTAACTTCCCACAGGAAGCTGAAGAA...CGTGTTTCCCAGCGGCAGTCTCCCATTCCCCTGTCCCCGCATCTCCCAGGCACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
3UTR-3UTR CCA 90 bp CAAGTCCCAAATGGCTGGTTGCAGTCGAGGCTCATTCTGTTTTCTCTGGAGGGACAGCAGGCTCGTGCCTaGGAGATGCGGGGACAGGGG +
Preference number: 2 (lower is better)
Translates to: QVPNGWLQSRLILFSLEGQQARA*EMRGQG
Trigger: CCCCTGTCCCCGCATCTCCCAGGCACGAGCCTGCTG...TCCCTCCAGAGAAAACAGAATGAGCCTCGACTGCAACCAGCCATTTGGGACTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
3UTR-3UTR GCA 90 bp GCCTCCTGCAATCCTGCCTTCTCTCCTCTTCTTAAGTTAGGGGAGTTCCGAGACGACCAGGAAGCTCTGTaGAGGAGCAGAGCAGCGCCC +
Preference number: 2 (lower is better)
Translates to: ASCNPAFSPLLKLGEFRDDQEAL*RSRAAP
Trigger: GGGCGCTGCTCTGCTCCTGCACAGAGCTTCCTGGTC...GTCTCGGAACTCCCCTAACTTAAGAAGAGGAGAGAAGGCAGGATTGCAGGAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
3UTR-3UTR TCA 90 bp GAAGCTCTGTGCAGGAGCAGAGCAGCGCCCAGAACTCTCACAGGCCAACCAAATGTGTTCTGTGGACACTaGGCTCTGCTAGCGTACTGC +
Preference number: 2 (lower is better)
Translates to: EALCRSRAAPRTLTGQPNVFCGH*ALLAYC
Trigger: GCAGTACGCTAGCAGAGCTCAGTGTCCACAGAACAC...ATTTGGTTGGCCTGTGAGAGTTCTGGGCGCTGCTCTGCTCCTGCACAGAGCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
3UTR-3UTR CCA 90 bp GCCGCAGCAGGCTCGTGCCTGGGAGATGCGGGGACAGGGGAATGGGAGACTGCCAACAACTATGGTTTTTaGCAACTTGCAACCAAACAC +
Preference number: 2 (lower is better)
Translates to: AAAGSCLGDAGTGEWETANNYGF*QLATKH
Trigger: GTGTTTGGTTGCAAGTTGCCAAAAACCATAGTTGTT...GGCAGTCTCCCATTCCCCTGTCCCCGCATCTCCCAGGCACGAGCCTGCTGCGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
3UTR-3UTR CCA 90 bp CATGAGGCTGAGGAGACCACAGTCTCCACTGCTGATTCACTTCCCACAGCAACAAACAGAGCAGGCAGCTaGAGCAGTGGGACACACAGG +
Preference number: 2 (lower is better)
Translates to: HEAEETTVSTADSLPTATNRAGS*SSGTHR
Trigger: CCTGTGTGTCCCACTGCTCCAGCTGCCTGCTCTGTT...TGTTGCTGTGGGAAGTGAATCAGCAGTGGAGACTGTGGTCTCCTCAGCCTCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
3UTR CAA 90 bp CATTGTTTCAGCATGACTCCAGCACGTGGGGAACAGGGTTTCCTGTaGGGTGACTTCTCTGGATCACAGAGGACAGAAGGGACCAGGCAC +
Preference number: 2 (lower is better)
Translates to: HCFSMTPARGEQGFL*GDFSGSQRTEGTRH
Trigger: GTGCCTGGTCCCTTCTGTCCTCTGTGATCCAGAGAAGTCACCCAACAGGAAACCCTGTTCCCCACGTGCTGGAGTCATGCTGAAACAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
3UTR-3UTR TCA 90 bp CATGAGGCTGAGGAGACCACAGTCTCCACTGCTGATTCACTTCCCACAGCAACAGACAGGAGAGGCCTCTaGGGACCCAGTTCTAAAAGG +
Preference number: 2 (lower is better)
Translates to: HEAEETTVSTADSLPTATDRRGL*GPSSKR
Trigger: CCTTTTAGAACTGGGTCCTCAGAGGCCTCTCCTGTC...TGTTGCTGTGGGAAGTGAATCAGCAGTGGAGACTGTGGTCTCCTCAGCCTCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
3UTR-3UTR TCA 90 bp CGGGGACAGGGGAATGGGAGACTGCCGCTGGGAAACACGCTGCTGTCCTTTCAAACCTCTTCTAGGAAATaGAGTGAAGGCAGCAAGGAA +
Preference number: 2 (lower is better)
Translates to: RGQGNGRLPLGNTLLSFQTSSRK*SEGSKE
Trigger: TTCCTTGCTGCCTTCACTTCATTTCCTAGAAGAGGT...TTGAAAGGACAGCAGCGTGTTTCCCAGCGGCAGTCTCCCATTCCCCTGTCCCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
3UTR-3UTR GCA 90 bp GAAGCTCTGTGCAGGAGCAGAGCAGCGCCCAGAACTCTCACAGGCCAACCAAATTCCCAAATGGCTGGTTaGAGTCGAGGCTCATTCTGT +
Preference number: 2 (lower is better)
Translates to: EALCRSRAAPRTLTGQPNSQMAG*SRGSFC
Trigger: ACAGAATGAGCCTCGACTGCAACCAGCCATTTGGGA...ATTTGGTTGGCCTGTGAGAGTTCTGGGCGCTGCTCTGCTCCTGCACAGAGCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
3UTR-3UTR CCA 90 bp CGTGCCTGGGAGATGCGGGGACAGGGGAATGGGAGACTGCCGCTGGGAAACACGATGGAATTGGAGTTTTaGTTTATGGGAGTTGCATTG +
Preference number: 2 (lower is better)
Translates to: RAWEMRGQGNGRLPLGNTMELEF*FMGVAL
Trigger: CAATGCAACTCCCATAAACCAAAACTCCAATTCCAT...CGTGTTTCCCAGCGGCAGTCTCCCATTCCCCTGTCCCCGCATCTCCCAGGCACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
3UTR-3UTR CCA 90 bp CGGGGACAGGGGAATGGGAGACTGCCGCTGGGAAACACGCTGCTGTCCTTTCAAGAATTCTGTGGACACTaGAGCTTTGTCAGAGAGGAA +
Preference number: 2 (lower is better)
Translates to: RGQGNGRLPLGNTLLSFQEFCGH*SFVREE
Trigger: TTCCTCTCTGACAAAGCTCCAGTGTCCACAGAATTC...TTGAAAGGACAGCAGCGTGTTTCCCAGCGGCAGTCTCCCATTCCCCTGTCCCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
3UTR-3UTR CCA 90 bp AGGGCAAGCCCAGCATTGCCTTCAACAAAACTCCAGTTTCCTTCTACCTTACTGACCAGCACACTGTGGTaGGTCCCGACGGGCCATGAG +
Preference number: 2 (lower is better)
Translates to: RASPALPSTKLQFPSTLLTSTLW*VPTGHE
Trigger: CTCATGGCCCGTCGGGACCCACCACAGTGTGCTGGT...CAGTAAGGTAGAAGGAAACTGGAGTTTTGTTGAAGGCAATGCTGGGCTTGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
3UTR-3UTR CCA 90 bp CATGAGGCTGAGGAGACCACAGTCTCCACTGCTGATTCACTTCCCACAGCAACAAACCAACCCCTCTCCTaGTTGGCTGCACCTCTTCTA +
Preference number: 2 (lower is better)
Translates to: HEAEETTVSTADSLPTATNQPLS*LAAPLL
Trigger: TAGAAGAGGTGCAGCCAACCAGGAGAGGGGTTGGTT...TGTTGCTGTGGGAAGTGAATCAGCAGTGGAGACTGTGGTCTCCTCAGCCTCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
3UTR-3UTR CCA 90 bp AGGAGGGGGCAGAGCGAGCACAGTGGAGCCAGAGGTTGGCTTTCATTCCCAAGGTGTTGCCTGTCTACTTaGGAGAAGTCGAAGAATCAA +
Preference number: 2 (lower is better)
Translates to: RRGQSEHSGARGWLSFPRCCLST*EKSKNQ
Trigger: TTGATTCTTCGACTTCTCCCAAGTAGACAGGCAACA...CCTTGGGAATGAAAGCCAACCTCTGGCTCCACTGTGCTCGCTCTGCCCCCTCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
3UTR CAA 90 bp GGCTTCCTTACCCTGGACTCCTTCAGATCCTCCCCGCTGTCATTTTaGCTGGTGACCACAGATAATGCAAATAGAGTACGTCACCATGCC +
Preference number: 2 (lower is better)
Translates to: GFLTLDSFRSSPLSF*LVTTDNANRVRHHA
Trigger: GGCATGGTGACGTACTCTATTTGCATTATCTGTGGTCACCAGCAAAAATGACAGCGGGGAGGATCTGAAGGAGTCCAGGGTAAGGAAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
3UTR-3UTR GCA 90 bp GAAGCTCTGTGCAGGAGCAGAGCAGCGCCCAGAACTCTCACAGGCCAACCAAATTGGTTTTTGGCAACTTaGAACCAAACACGATTGTCG +
Preference number: 2 (lower is better)
Translates to: EALCRSRAAPRTLTGQPNWFLAT*NQTRLS
Trigger: CGACAATCGTGTTTGGTTGCAAGTTGCCAAAAACCA...ATTTGGTTGGCCTGTGAGAGTTCTGGGCGCTGCTCTGCTCCTGCACAGAGCTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
3UTR CAA 90 bp AGAGGGTTCAGCAATGCTAGGCTGCTTATCTGCTGGCCTTATCTCTaGAGTCAAGATCCCACAGGATCAGTCTTGGCCAAAGGACTGGTA +
Preference number: 2 (lower is better)
Translates to: RGFSNARLLICWPYL*SQDPTGSVLAKGLV
Trigger: TACCAGTCCTTTGGCCAAGACTGATCCTGTGGGATCTTGACTCAAGAGATAAGGCCAGCAGATAAGCAGCCTAGCATTGCTGAACCCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
3UTR-3UTR TCA 90 bp GCCTCCTGCAATCCTGCCTTCTCTCCTCTTCTTAAGTTAGGGGAGTTCCGAGACAGGTGTCCGAATGCTTaGTGTTTCAGTAGAGACCAA +
Preference number: 2 (lower is better)
Translates to: ASCNPAFSPLLKLGEFRDRCPNA*CFSRDQ
Trigger: TTGGTCTCTACTGAAACATCAAGCATTCGGACACCT...GTCTCGGAACTCCCCTAACTTAAGAAGAGGAGAGAAGGCAGGATTGCAGGAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
3UTR CAA 90 bp ATGAACAAACAAACCAACCAACCAACCAACCAACCCCTCTCCTGGTaGGCTGCACCTCTTCTAGGAAATGAAGTGAAGGCAGCAAGGAAA +
Preference number: 2 (lower is better)
Translates to: MNKQTNQPTNQPLSW*AAPLLGNEVKAARK
Trigger: TTTCCTTGCTGCCTTCACTTCATTTCCTAGAAGAGGTGCAGCCAACCAGGAGAGGGGTTGGTTGGTTGGTTGGTTGGTTTGTTTGTTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
3UTR CAA 90 bp GATTTCTGTTGCCTGTCTACTTGGGAGAAGTCGAAGAATCAACAGTaGACAGCCAGCTTAGGAAGGCCACAGGGGAAAGAGAAAGACTAC +
Preference number: 2 (lower is better)
Translates to: DFCCLSTWEKSKNQQ*TASLGRPQGKEKDY
Trigger: GTAGTCTTTCTCTTTCCCCTGTGGCCTTCCTAAGCTGGCTGTCAACTGTTGATTCTTCGACTTCTCCCAAGTAGACAGGCAACAGAAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
3UTR CAA 90 bp GGATTTAATCCCAGCCTGGAGCAAGTTAGGCATGGAATTGGAGTTTaGGTTTATGGGAGTTGCATTGTTTTCCCAAGTCTCAGTCCAAAT +
Preference number: 2 (lower is better)
Translates to: GFNPSLEQVRHGIGV*VYGSCIVFPSLSPN
Trigger: ATTTGGACTGAGACTTGGGAAAACAATGCAACTCCCATAAACCAAAACTCCAATTCCATGCCTAACTTGCTCCAGGCTGGGATTAAATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
3UTR-3UTR CCA 90 bp TGCCGCTGGGAAACACGCTGCTGTCCTTTCAATTTCAGTTTTAAAGGTAAAATAAGGAAAGCTCTGCTTTaGGGGACACAAGAAAAAGAC +
Preference number: 2 (lower is better)
Translates to: CRWETRCCPFNFSFKGKIRKALL*GTQEKD
Trigger: GTCTTTTTCTTGTGTCCCCCAAAGCAGAGCTTTCCT...TATTTTACCTTTAAAACTGAAATTGAAAGGACAGCAGCGTGTTTCCCAGCGGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
3UTR CCA 72 bp GGCCATGAGCCAGACGAGCCGCAGCAGGCTCGTGCCTaGGAGATGCGGGGACAGGGGAATGGGAGACTGCCG +
Preference number: 3 (lower is better)
Translates to: GHEPDEPQQARA*EMRGQGNGRLP
Trigger: CGGCAGTCTCCCATTCCCCTGTCCCCGCATCTCCCAGGCACGAGCCTGCTGCGGCTCGTCTGGCTCATGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
3UTR TCA 72 bp CCAGCTTTGTCAGGGCACGGTGGGCGTGCACCGACGTaGGCCCTGGTTGGTAGGAGGGGGCAGAGCGAGCAC +
Preference number: 3 (lower is better)
Translates to: PALSGHGGRAPT*ALVGRRGQSEH
Trigger: GTGCTCGCTCTGCCCCCTCCTACCAACCAGGGCTCACGTCGGTGCACGCCCACCGTGCCCTGACAAAGCTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
3UTR GCA 72 bp AGCCAGACGAGCCGCAGCAGGCTCGTGCCTGGGAGATaGGGGGACAGGGGAATGGGAGACTGCCGCTGGGAA +
Preference number: 3 (lower is better)
Translates to: SQTSRSRLVPGR*GDRGMGDCRWE
Trigger: TTCCCAGCGGCAGTCTCCCATTCCCCTGTCCCCGCATCTCCCAGGCACGAGCCTGCTGCGGCTCGTCTGGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
3UTR CCA 72 bp TGTCAGGGCACGGTGGGCGTGCACCGACGTGAGCCCTaGTTGGTAGGAGGGGGCAGAGCGAGCACAGTGGAG +
Preference number: 3 (lower is better)
Translates to: CQGTVGVHRREP*LVGGGRASTVE
Trigger: CTCCACTGTGCTCGCTCTGCCCCCTCCTACCAACCAGGGCTCACGTCGGTGCACGCCCACCGTGCCCTGACA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
3UTR CCA 72 bp AGTGCTAGGACACAGGCGTGCACCAGCACACTGTGGTaGGTCCCGACGGGCCATGAGGATGCCGGGAGGCTC +
Preference number: 3 (lower is better)
Translates to: SARTQACTSTLW*VPTGHEDAGRL
Trigger: GAGCCTCCCGGCATCCTCATGGCCCGTCGGGACCCACCACAGTGTGCTGGTGCACGCCTGTGTCCTAGCACT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
3UTR GCA 72 bp CTGCCTCTGTCTGCCCTGAGTGCTAGGACACAGGCGTaGACCAGCACACTGTGGTGGGTCCCGACGGGCCAT +
Preference number: 3 (lower is better)
Translates to: LPLSALSARTQA*TSTLWWVPTGH
Trigger: ATGGCCCGTCGGGACCCACCACAGTGTGCTGGTGCACGCCTGTGTCCTAGCACTCAGGGCAGACAGAGGCAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
3UTR CCA 72 bp GCAGGCTCGTGCCTGGGAGATGCGGGGACAGGGGAATaGGAGACTGCCGCTGGGAAACACGCTGCTGTCCTT +
Preference number: 3 (lower is better)
Translates to: AGSCLGDAGTGE*ETAAGKHAAVL
Trigger: AAGGACAGCAGCGTGTTTCCCAGCGGCAGTCTCCCATTCCCCTGTCCCCGCATCTCCCAGGCACGAGCCTGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
3UTR-3UTR CAA 90 bp GCCGCAGCAGGCTCGTGCCTGGGAGATGCGGGGACAGGGGAATGGGAGACTGCCGTGGACACTGGAGCTTaGTCAGAGAGGAAGAAGTTC +
Preference number: 3 (lower is better)
Translates to: AAAGSCLGDAGTGEWETAVDTGA*SERKKF
Trigger: GAACTTCTTCCTCTCTGACAAAGCTCCAGTGTCCAC...GGCAGTCTCCCATTCCCCTGTCCCCGCATCTCCCAGGCACGAGCCTGCTGCGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
3UTR CCA 72 bp AGGAGGGGGCAGAGCGAGCACAGTGGAGCCAGAGGTTaGCTTTCATTCCCAAGGATGGGGCTGCTGAGAGGC +
Preference number: 3 (lower is better)
Translates to: RRGQSEHSGARG*LSFPRMGLLRG
Trigger: GCCTCTCAGCAGCCCCATCCTTGGGAATGAAAGCCAACCTCTGGCTCCACTGTGCTCGCTCTGCCCCCTCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
3UTR-3UTR CAA 90 bp GCCGCAGCAGGCTCGTGCCTGGGAGATGCGGGGACAGGGGAATGGGAGACTGCCAAGGAAAGCTCTGCTTaGGGGGACACAAGAAAAAGA +
Preference number: 3 (lower is better)
Translates to: AAAGSCLGDAGTGEWETAKESSA*GDTRKR
Trigger: TCTTTTTCTTGTGTCCCCCAAAGCAGAGCTTTCCTT...GGCAGTCTCCCATTCCCCTGTCCCCGCATCTCCCAGGCACGAGCCTGCTGCGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
3UTR GCA 72 bp GTGCCTGGGAGATGCGGGGACAGGGGAATGGGAGACTaGCGCTGGGAAACACGCTGCTGTCCTTTCAATTTC +
Preference number: 3 (lower is better)
Translates to: VPGRCGDRGMGD*RWETRCCPFNF
Trigger: GAAATTGAAAGGACAGCAGCGTGTTTCCCAGCGGCAGTCTCCCATTCCCCTGTCCCCGCATCTCCCAGGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
3UTR GCA 72 bp CGCACACTATGTGGCATGCATGACCAGGAAGCTCTGTaGAGGAGCAGAGCAGCGCCCAGAACTCTCACAGGC +
Preference number: 3 (lower is better)
Translates to: RTLCGMHDQEAL*RSRAAPRTLTG
Trigger: GCCTGTGAGAGTTCTGGGCGCTGCTCTGCTCCTGCACAGAGCTTCCTGGTCATGCATGCCACATAGTGTGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
3UTR CCA 72 bp ACAGGGCGCTTCTACAGAGCCATCATGGGTCCTCTGTaGCTGACAGGAGGCGGGGAAGAGCTGTCTTCTGTG +
Preference number: 3 (lower is better)
Translates to: TGRFYRAIMGPL*LTGGGEELSSV
Trigger: CACAGAAGACAGCTCTTCCCCGCCTCCTGTCAGCCACAGAGGACCCATGATGGCTCTGTAGAAGCGCCCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
3UTR-3UTR CAA 90 bp CGTGCCTGGGAGATGCGGGGACAGGGGAATGGGAGACTGCCGCTGGGAAACACGATGGTTTTTGGCAACTaGCAACCAAACACGATTGTC +
Preference number: 3 (lower is better)
Translates to: RAWEMRGQGNGRLPLGNTMVFGN*QPNTIV
Trigger: GACAATCGTGTTTGGTTGCAAGTTGCCAAAAACCAT...CGTGTTTCCCAGCGGCAGTCTCCCATTCCCCTGTCCCCGCATCTCCCAGGCACG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
3UTR CCA 72 bp ACAGAAAGCTCACAGGGGCGCTTCTTCAGCTTCCTGTaGGAAGTTACTGCGGTCTCTCCCCTTACTTCCCGG +
Preference number: 3 (lower is better)
Translates to: TESSQGRFFSFL*EVTAVSPLTSR
Trigger: CCGGGAAGTAAGGGGAGAGACCGCAGTAACTTCCCACAGGAAGCTGAAGAAGCGCCCCTGTGAGCTTTCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
3UTR-3UTR CAA 90 bp CGTGCCTGGGAGATGCGGGGACAGGGGAATGGGAGACTGCCGCTGGGAAACACGATGTCCTCTGTTTTGTaGAGACAGAGTCTCATCATA +
Preference number: 3 (lower is better)
Translates to: RAWEMRGQGNGRLPLGNTMSSVL*RQSLII
Trigger: TATGATGAGACTCTGTCTCAACAAAACAGAGGACAT...CGTGTTTCCCAGCGGCAGTCTCCCATTCCCCTGTCCCCGCATCTCCCAGGCACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
3UTR CCA 72 bp GGGAGATGCGGGGACAGGGGAATGGGAGACTGCCGCTaGGAAACACGCTGCTGTCCTTTCAATTTCAGTTTT +
Preference number: 3 (lower is better)
Translates to: GRCGDRGMGDCR*ETRCCPFNFSF
Trigger: AAAACTGAAATTGAAAGGACAGCAGCGTGTTTCCCAGCGGCAGTCTCCCATTCCCCTGTCCCCGCATCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
3UTR CCA 72 bp TTCTACCTTACTGGTGCTCCCAAAACACGGGGCAGGTaGGGTTGTGGAGCCCTCGTCCCAAACAAGGAAGAA +
Preference number: 3 (lower is better)
Translates to: FYLTGAPKTRGR*GCGALVPNKEE
Trigger: TTCTTCCTTGTTTGGGACGAGGGCTCCACAACCCCACCTGCCCCGTGTTTTGGGAGCACCAGTAAGGTAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
3UTR TCA 72 bp CGGATGGACGGCGGCTCTATAAACATTGTTTCAGCATaGCTCCAGCACGTGGGGAACAGGGTTTCCTGTTGG +
Preference number: 3 (lower is better)
Translates to: RMDGGSINIVSA*LQHVGNRVSCW
Trigger: CCAACAGGAAACCCTGTTCCCCACGTGCTGGAGTCATGCTGAAACAATGTTTATAGAGCCGCCGTCCATCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
3UTR GCA 72 bp CAGCACTCAGGGACCATCAAGTCCCAAATGGCTGGTTaGAGTCGAGGCTCATTCTGTTTTCTCTGGAGGGAC +
Preference number: 3 (lower is better)
Translates to: QHSGTIKSQMAG*SRGSFCFLWRD
Trigger: GTCCCTCCAGAGAAAACAGAATGAGCCTCGACTGCAACCAGCCATTTGGGACTTGATGGTCCCTGAGTGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
3UTR CCA 72 bp ATGGCTGGTTGCAGTCGAGGCTCATTCTGTTTTCTCTaGAGGGACTGCAGAGATCTCAGGCAGAGGAACCCA +
Preference number: 3 (lower is better)
Translates to: MAGCSRGSFCFL*RDCRDLRQRNP
Trigger: TGGGTTCCTCTGCCTGAGATCTCTGCAGTCCCTCCAGAGAAAACAGAATGAGCCTCGACTGCAACCAGCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
3UTR-3UTR CAA 90 bp CGGGGACAGGGGAATGGGAGACTGCCGCTGGGAAACACGCTGCTGTCCTTTCAATTTATGGGAGTTGCATaGTTTTCCCAAGTCTCAGTC +
Preference number: 3 (lower is better)
Translates to: RGQGNGRLPLGNTLLSFQFMGVA*FSQVSV
Trigger: GACTGAGACTTGGGAAAACAATGCAACTCCCATAAA...TTGAAAGGACAGCAGCGTGTTTCCCAGCGGCAGTCTCCCATTCCCCTGTCCCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
3UTR-3UTR CAA 90 bp CCCCTCTCCTGGTTGGCTGCACCTCTTCTAGGAAATGAAGTGAAGGCAGCAAGGCAGATGTCCTCTGTTTaGTTGAGACAGAGTCTCATC +
Preference number: 3 (lower is better)
Translates to: PLSWLAAPLLGNEVKAARQMSSV*LRQSLI
Trigger: GATGAGACTCTGTCTCAACAAAACAGAGGACATCTG...CCTTGCTGCCTTCACTTCATTTCCTAGAAGAGGTGCAGCCAACCAGGAGAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
3UTR-3UTR CAA 90 bp AGGGCAAGCCCAGCATTGCCTTCAACAAAACTCCAGTTTCCTTCTACCTTACTGAACAGGAGGGCTCTCTaGCCAAGACCAGCAGAGCAA +
Preference number: 3 (lower is better)
Translates to: RASPALPSTKLQFPSTLLNRRAL*PRPAEQ
Trigger: TTGCTCTGCTGGTCTTGGCAAGAGAGCCCTCCTGTT...CAGTAAGGTAGAAGGAAACTGGAGTTTTGTTGAAGGCAATGCTGGGCTTGCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
3UTR-3UTR CAA 90 bp GCCTCCTGCAATCCTGCCTTCTCTCCTCTTCTTAAGTTAGGGGAGTTCCGAGACACCCCTCCTCTAGAGTaGGCCTTTTCCAAGTTTCAA +
Preference number: 3 (lower is better)
Translates to: ASCNPAFSPLLKLGEFRDTPPLE*AFSKFQ
Trigger: TTGAAACTTGGAAAAGGCCAACTCTAGAGGAGGGGT...GTCTCGGAACTCCCCTAACTTAAGAAGAGGAGAGAAGGCAGGATTGCAGGAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
3UTR TCA 72 bp ATGCTTTCAGTTCTCGCCAGAGCTCAGACATTAAAATaGGAAGGCTGGCAGGGCAAGCCCAGCATTGCCTTC +
Preference number: 3 (lower is better)
Translates to: MLSVLARAQTLK*EGWQGKPSIAF
Trigger: GAAGGCAATGCTGGGCTTGCCCTGCCAGCCTTCTCATTTTAATGTCTGAGCTCTGGCGAGAACTGAAAGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
3UTR CCA 72 bp CCGGGAGGCTCTAACAGCTCTGAATTCTGTGGACACTaGAGCTTTGTCAGAGAGGAAGAAGTTCGGAAGTTC +
Preference number: 3 (lower is better)
Translates to: PGGSNSSEFCGH*SFVREEEVRKF
Trigger: GAACTTCCGAACTTCTTCCTCTCTGACAAAGCTCCAGTGTCCACAGAATTCAGAGCTGTTAGAGCCTCCCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
3UTR CCA 72 bp TCTACAGCACTCAGGGACCATCAAGTCCCAAATGGCTaGTTGCAGTCGAGGCTCATTCTGTTTTCTCTGGAG +
Preference number: 3 (lower is better)
Translates to: STALRDHQVPNG*LQSRLILFSLE
Trigger: CTCCAGAGAAAACAGAATGAGCCTCGACTGCAACCAGCCATTTGGGACTTGATGGTCCCTGAGTGCTGTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
3UTR TCA 72 bp GCAATGCTAGGCTGCTTATCTGCTGGCCTTATCTCTTaGGTCAAGATCCCACAGGATCAGTCTTGGCCAAAG +
Preference number: 3 (lower is better)
Translates to: AMLGCLSAGLIS*VKIPQDQSWPK
Trigger: CTTTGGCCAAGACTGATCCTGTGGGATCTTGACTCAAGAGATAAGGCCAGCAGATAAGCAGCCTAGCATTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
3UTR CCA 72 bp GGAAATGAAGTGAAGGCAGCAAGGAAAGCTCTGCTTTaGGGGACACAAGAAAAAGACGACACAGCACTGCAC +
Preference number: 3 (lower is better)
Translates to: GNEVKAARKALL*GTQEKDDTALH
Trigger: GTGCAGTGCTGTGTCGTCTTTTTCTTGTGTCCCCCAAAGCAGAGCTTTCCTTGCTGCCTTCACTTCATTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
3UTR CCA 72 bp AAACAAACCAACCAACCAACCAACCAACCCCTCTCCTaGTTGGCTGCACCTCTTCTAGGAAATGAAGTGAAG +
Preference number: 3 (lower is better)
Translates to: KQTNQPTNQPLS*LAAPLLGNEVK
Trigger: CTTCACTTCATTTCCTAGAAGAGGTGCAGCCAACCAGGAGAGGGGTTGGTTGGTTGGTTGGTTGGTTTGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
3UTR CCA 72 bp AACATCTACAGCACTCAGGGACCATCAAGTCCCAAATaGCTGGTTGCAGTCGAGGCTCATTCTGTTTTCTCT +
Preference number: 3 (lower is better)
Translates to: NIYSTQGPSSPK*LVAVEAHSVFS
Trigger: AGAGAAAACAGAATGAGCCTCGACTGCAACCAGCCATTTGGGACTTGATGGTCCCTGAGTGCTGTAGATGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
3UTR-3UTR CAA 90 bp CAAGTCCCAAATGGCTGGTTGCAGTCGAGGCTCATTCTGTTTTCTCTGGAGGGAAGGTTAAGATTTCTGTaGCCTGTCTACTTGGGAGAA +
Preference number: 3 (lower is better)
Translates to: QVPNGWLQSRLILFSLEGRLRFL*PVYLGE
Trigger: TTCTCCCAAGTAGACAGGCAACAGAAATCTTAACCT...TCCCTCCAGAGAAAACAGAATGAGCCTCGACTGCAACCAGCCATTTGGGACTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
3UTR-3UTR CAA 90 bp CAAGTCCCAAATGGCTGGTTGCAGTCGAGGCTCATTCTGTTTTCTCTGGAGGGACATGGAATTGGAGTTTaGGTTTATGGGAGTTGCATT +
Preference number: 3 (lower is better)
Translates to: QVPNGWLQSRLILFSLEGHGIGV*VYGSCI
Trigger: AATGCAACTCCCATAAACCAAAACTCCAATTCCATG...TCCCTCCAGAGAAAACAGAATGAGCCTCGACTGCAACCAGCCATTTGGGACTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
3UTR GCA 72 bp GTTAGGCATGGAATTGGAGTTTTGGTTTATGGGAGTTaGATTGTTTTCCCAAGTCTCAGTCCAAATGTTTGC +
Preference number: 3 (lower is better)
Translates to: VRHGIGVLVYGS*IVFPSLSPNVC
Trigger: GCAAACATTTGGACTGAGACTTGGGAAAACAATGCAACTCCCATAAACCAAAACTCCAATTCCATGCCTAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
3UTR GCA 72 bp AGTTGCATTGTTTTCCCAAGTCTCAGTCCAAATGTTTaGACACTGGAAAATTCCAAATTAAAGGACACAGAA +
Preference number: 3 (lower is better)
Translates to: SCIVFPSLSPNV*TLENSKLKDTE
Trigger: TTCTGTGTCCTTTAATTTGGAATTTTCCAGTGTGCAAACATTTGGACTGAGACTTGGGAAAACAATGCAACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
3UTR CAA 72 bp CAGGGCACGGTGGGCGTGCACCGACGTGAGCCCTGGTaGGTAGGAGGGGGCAGAGCGAGCACAGTGGAGCCA +
Preference number: 4 (lower is better)
Translates to: QGTVGVHRREPW*VGGGRASTVEP
Trigger: TGGCTCCACTGTGCTCGCTCTGCCCCCTCCTACCAACCAGGGCTCACGTCGGTGCACGCCCACCGTGCCCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
CDS-3UTR CCA 90 bp GCCGCAGCAGGCTCGTGCCTGGGAGATGCGGGGACAGGGGAATGGGAGACTGCCCTCAACCTCCAACACTaGGTGGGGGTCCTCATCTTG +
Preference number: 4 (lower is better)
Translates to: AAAGSCLGDAGTGEWETALNLQH*VGVLIL
Trigger: CAAGATGAGGACCCCCACCCAGTGTTGGAGGTTGAG...GGCAGTCTCCCATTCCCCTGTCCCCGCATCTCCCAGGCACGAGCCTGCTGCGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
CDS-3UTR CCA 90 bp TCCCACTGCGGCGGCTGTCTGTCTTTCCAGGCTGAGCCTCCTGCAATCCTGCCTCTCCTCACCGGGGACTaGGAGCGGTACTCTCGGGTC +
Preference number: 4 (lower is better)
Translates to: SHCGGCLSFQAEPPAILPLLTGD*ERYSRV
Trigger: GACCCGAGAGTACCGCTCCCAGTCCCCGGTGAGGAG...AGGCAGGATTGCAGGAGGCTCAGCCTGGAAAGACAGACAGCCGCCGCAGTGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
CDS-3UTR GCA 90 bp GGGACCAGGCACAGGGCGCTTCTACAGAGCCATCATGGGTCCTCTGTGGCTGACTCTACCTTGAGTGGCTaGCAGGCCCAGGGACCTGGG +
Preference number: 4 (lower is better)
Translates to: GTRHRALLQSHHGSSVADSTLSG*QAQGPG
Trigger: CCCAGGTCCCTGGGCCTGGCAGCCACTCAAGGTAGA...GTCAGCCACAGAGGACCCATGATGGCTCTGTAGAAGCGCCCTGTGCCTGGTCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
CDS-3UTR CCA 90 bp CGTGCCTGGGAGATGCGGGGACAGGGGAATGGGAGACTGCCGCTGGGAAACACGGGCAGATGGAGTGCTTaGAGACACGACCTGTACGGG +
Preference number: 4 (lower is better)
Translates to: RAWEMRGQGNGRLPLGNTGRWSA*RHDLYG
Trigger: CCCGTACAGGTCGTGTCTCCAAGCACTCCATCTGCC...CGTGTTTCCCAGCGGCAGTCTCCCATTCCCCTGTCCCCGCATCTCCCAGGCACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
CDS-3UTR CCA 90 bp CGGGGACAGGGGAATGGGAGACTGCCGCTGGGAAACACGCTGCTGTCCTTTCAAGACTGTGGAGGGTGGTaGCCCAGGCGCCGAGCAATC +
Preference number: 4 (lower is better)
Translates to: RGQGNGRLPLGNTLLSFQDCGGW*PRRRAI
Trigger: GATTGCTCGGCGCCTGGGCCACCACCCTCCACAGTC...TTGAAAGGACAGCAGCGTGTTTCCCAGCGGCAGTCTCCCATTCCCCTGTCCCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
CDS-3UTR GCA 90 bp CGTGCCTGGGAGATGCGGGGACAGGGGAATGGGAGACTGCCGCTGGGAAACACGATGGGAGGAGGCCCATaGGTGGTGACAATGCAGTTC +
Preference number: 4 (lower is better)
Translates to: RAWEMRGQGNGRLPLGNTMGGGP*VVTMQF
Trigger: GAACTGCATTGTCACCACGCATGGGCCTCCTCCCAT...CGTGTTTCCCAGCGGCAGTCTCCCATTCCCCTGTCCCCGCATCTCCCAGGCACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
CDS-3UTR CCA 90 bp TCCCACTGCGGCGGCTGTCTGTCTTTCCAGGCTGAGCCTCCTGCAATCCTGCCTGCCACCTCGAGGGTGTaGACTGGGGCCAGAGATGTT +
Preference number: 4 (lower is better)
Translates to: SHCGGCLSFQAEPPAILPATSRV*TGARDV
Trigger: AACATCTCTGGCCCCAGTCCACACCCTCGAGGTGGC...AGGCAGGATTGCAGGAGGCTCAGCCTGGAAAGACAGACAGCCGCCGCAGTGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
CDS-3UTR CCA 90 bp CGGGGACAGGGGAATGGGAGACTGCCGCTGGGAAACACGCTGCTGTCCTTTCAACTCCCGCTTGGCGCCTaGCTGAAGACCACCACACAC +
Preference number: 4 (lower is better)
Translates to: RGQGNGRLPLGNTLLSFQLPLGA*LKTTTH
Trigger: GTGTGTGGTGGTCTTCAGCCAGGCGCCAAGCGGGAG...TTGAAAGGACAGCAGCGTGTTTCCCAGCGGCAGTCTCCCATTCCCCTGTCCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
CDS-3UTR CCA 90 bp GAAGCTCTGTGCAGGAGCAGAGCAGCGCCCAGAACTCTCACAGGCCAACCAAATGGGCGCTCTCCCGCTTaGCGCCTGGCTGAAGACCAC +
Preference number: 4 (lower is better)
Translates to: EALCRSRAAPRTLTGQPNGRSPA*RLAEDH
Trigger: GTGGTCTTCAGCCAGGCGCCAAGCGGGAGAGCGCCC...ATTTGGTTGGCCTGTGAGAGTTCTGGGCGCTGCTCTGCTCCTGCACAGAGCTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
CDS-3UTR CCA 90 bp GGGACCAGGCACAGGGCGCTTCTACAGAGCCATCATGGGTCCTCTGTGGCTGACCAGAGATGTTCGGCTTaGACCACGCCCACTGCTCCA +
Preference number: 4 (lower is better)
Translates to: GTRHRALLQSHHGSSVADQRCSA*TTPTAP
Trigger: TGGAGCAGTGGGCGTGGTCCAAGCCGAACATCTCTG...GTCAGCCACAGAGGACCCATGATGGCTCTGTAGAAGCGCCCTGTGCCTGGTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
CDS-3UTR CCA 90 bp AGGAGGGGGCAGAGCGAGCACAGTGGAGCCAGAGGTTGGCTTTCATTCCCAAGGTCTGCCTTTGAGCCCTaGGCCTCAGTGTTCCCCAGC +
Preference number: 4 (lower is better)
Translates to: RRGQSEHSGARGWLSFPRSAFEP*ASVFPS
Trigger: GCTGGGGAACACTGAGGCCCAGGGCTCAAAGGCAGA...CCTTGGGAATGAAAGCCAACCTCTGGCTCCACTGTGCTCGCTCTGCCCCCTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
CDS-3UTR TCA 90 bp TCCCACTGCGGCGGCTGTCTGTCTTTCCAGGCTGAGCCTCCTGCAATCCTGCCTGGAAGGATAGGACCCTaGGGCCAATGGTCGAATCCA +
Preference number: 4 (lower is better)
Translates to: SHCGGCLSFQAEPPAILPGRIGP*GQWSNP
Trigger: TGGATTCGACCATTGGCCTCAGGGTCCTATCCTTCC...AGGCAGGATTGCAGGAGGCTCAGCCTGGAAAGACAGACAGCCGCCGCAGTGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
CDS-3UTR GCA 90 bp CCCCTCTCCTGGTTGGCTGCACCTCTTCTAGGAAATGAAGTGAAGGCAGCAAGGGCCCAGGGACCTGGGTaGATGTGCAGCAGCCAGGCA +
Preference number: 4 (lower is better)
Translates to: PLSWLAAPLLGNEVKAARAQGPG*MCSSQA
Trigger: TGCCTGGCTGCTGCACATGCACCCAGGTCCCTGGGC...CCTTGCTGCCTTCACTTCATTTCCTAGAAGAGGTGCAGCCAACCAGGAGAGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
CDS-3UTR TCA 90 bp GGGACCAGGCACAGGGCGCTTCTACAGAGCCATCATGGGTCCTCTGTGGCTGACAGTGGCACTGATAGGTaGCGGGCGAGAGTTCAAACT +
Preference number: 4 (lower is better)
Translates to: GTRHRALLQSHHGSSVADSGTDR*RARVQT
Trigger: AGTTTGAACTCTCGCCCGTCACCTATCAGTGCCACT...GTCAGCCACAGAGGACCCATGATGGCTCTGTAGAAGCGCCCTGTGCCTGGTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
CDS-3UTR TCA 90 bp AAAAGACCAACGGACAGGAAGGAGGCAGACAGACGGATGGACGGCGGCTCTATACCACTGCTCAGGCTCTaGCTCCCAGGGGAGCTTGGA +
Preference number: 4 (lower is better)
Translates to: KRPTDRKEADRRMDGGSIPLLRL*LPGELG
Trigger: TCCAAGCTCCCCTGGGAGTCAGAGCCTGAGCAGTGG...TATAGAGCCGCCGTCCATCCGTCTGTCTGCCTCCTTCCTGTCCGTTGGTCTTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
CDS-3UTR GCA 90 bp TCCCACTGCGGCGGCTGTCTGTCTTTCCAGGCTGAGCCTCCTGCAATCCTGCCTCAGAGGCAGATGGAGTaGTTGGAGACACGACCTGTA +
Preference number: 4 (lower is better)
Translates to: SHCGGCLSFQAEPPAILPQRQME*LETRPV
Trigger: TACAGGTCGTGTCTCCAAGCACTCCATCTGCCTCTG...AGGCAGGATTGCAGGAGGCTCAGCCTGGAAAGACAGACAGCCGCCGCAGTGGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
CDS-3UTR CCA 90 bp CATGAGGCTGAGGAGACCACAGTCTCCACTGCTGATTCACTTCCCACAGCAACAGCCATCTCCTCTGGCTaGGGAGAGGCTCCCTTCCCG +
Preference number: 4 (lower is better)
Translates to: HEAEETTVSTADSLPTATAISSG*GEAPFP
Trigger: CGGGAAGGGAGCCTCTCCCCAGCCAGAGGAGATGGC...TGTTGCTGTGGGAAGTGAATCAGCAGTGGAGACTGTGGTCTCCTCAGCCTCATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
CDS-3UTR CCA 90 bp GAAGCTCTGTGCAGGAGCAGAGCAGCGCCCAGAACTCTCACAGGCCAACCAAATCACATTAAGGGACTGTaGAGGGTGGTGGCCCAGGCG +
Preference number: 4 (lower is better)
Translates to: EALCRSRAAPRTLTGQPNHIKGL*RVVAQA
Trigger: CGCCTGGGCCACCACCCTCCACAGTCCCTTAATGTG...ATTTGGTTGGCCTGTGAGAGTTCTGGGCGCTGCTCTGCTCCTGCACAGAGCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
CDS-3UTR TCA 90 bp CATGAGGCTGAGGAGACCACAGTCTCCACTGCTGATTCACTTCCCACAGCAACAAGTTCAAACTGGGGCTaGGGGGCGCTCTCCCGCTTG +
Preference number: 4 (lower is better)
Translates to: HEAEETTVSTADSLPTATSSNWG*GALSRL
Trigger: CAAGCGGGAGAGCGCCCCTCAGCCCCAGTTTGAACT...TGTTGCTGTGGGAAGTGAATCAGCAGTGGAGACTGTGGTCTCCTCAGCCTCATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
CDS-3UTR GCA 90 bp CATGAGGCTGAGGAGACCACAGTCTCCACTGCTGATTCACTTCCCACAGCAACATTGGACCACGCCCACTaGTCCAGGTCCAGGACCCAG +
Preference number: 4 (lower is better)
Translates to: HEAEETTVSTADSLPTATLDHAH*SRSRTQ
Trigger: CTGGGTCCTGGACCTGGAGCAGTGGGCGTGGTCCAA...TGTTGCTGTGGGAAGTGAATCAGCAGTGGAGACTGTGGTCTCCTCAGCCTCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
CDS-3UTR CCA 90 bp CATGAGGCTGAGGAGACCACAGTCTCCACTGCTGATTCACTTCCCACAGCAACAACCATCTCCTTGGGCTaGTCCTGGGCGGGAGTTGGG +
Preference number: 4 (lower is better)
Translates to: HEAEETTVSTADSLPTATTISLG*SWAGVG
Trigger: CCCAACTCCCGCCCAGGACCAGCCCAAGGAGATGGT...TGTTGCTGTGGGAAGTGAATCAGCAGTGGAGACTGTGGTCTCCTCAGCCTCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
CDS-3UTR TCA 90 bp AAAAGACCAACGGACAGGAAGGAGGCAGACAGACGGATGGACGGCGGCTCTATAGAGGCCCATGCGTGGTaGCAATGCAGTTCCACCAGT +
Preference number: 4 (lower is better)
Translates to: KRPTDRKEADRRMDGGSIEAHAW*QCSSTS
Trigger: ACTGGTGGAACTGCATTGTCACCACGCATGGGCCTC...TATAGAGCCGCCGTCCATCCGTCTGTCTGCCTCCTTCCTGTCCGTTGGTCTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
CDS-3UTR CCA 90 bp CATCATATAACTCAGGCTAAGCCCAAACCTGAAGTCATCCTGCCTCTGTCTGCCCCAGGCCCAGGGACCTaGGTGCATGTGCAGCAGCCA +
Preference number: 4 (lower is better)
Translates to: HHITQAKPKPEVILPLSAPGPGT*VHVQQP
Trigger: TGGCTGCTGCACATGCACCCAGGTCCCTGGGCCTGG...GGCAGACAGAGGCAGGATGACTTCAGGTTTGGGCTTAGCCTGAGTTATATGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
CDS-3UTR CCA 90 bp CGGGGACAGGGGAATGGGAGACTGCCGCTGGGAAACACGCTGCTGTCCTTTCAAAGCTCCGGGGCACCATaGTCTTCATTTTCTACCTTG +
Preference number: 4 (lower is better)
Translates to: RGQGNGRLPLGNTLLSFQSSGAP*SSFSTL
Trigger: CAAGGTAGAAAATGAAGACCATGGTGCCCCGGAGCT...TTGAAAGGACAGCAGCGTGTTTCCCAGCGGCAGTCTCCCATTCCCCTGTCCCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
CDS-3UTR CCA 90 bp CCCCTCTCCTGGTTGGCTGCACCTCTTCTAGGAAATGAAGTGAAGGCAGCAAGGCTCAGGAACCAGGGCTaGAGGAGTGGCACTGATAGG +
Preference number: 4 (lower is better)
Translates to: PLSWLAAPLLGNEVKAARLRNQG*RSGTDR
Trigger: CCTATCAGTGCCACTCCTCCAGCCCTGGTTCCTGAG...CCTTGCTGCCTTCACTTCATTTCCTAGAAGAGGTGCAGCCAACCAGGAGAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
3UTR CAA 72 bp AGCATGACTCCAGCACGTGGGGAACAGGGTTTCCTGTaGGGTGACTTCTCTGGATCACAGAGGACAGAAGGG +
Preference number: 4 (lower is better)
Translates to: SMTPARGEQGFL*GDFSGSQRTEG
Trigger: CCCTTCTGTCCTCTGTGATCCAGAGAAGTCACCCAACAGGAAACCCTGTTCCCCACGTGCTGGAGTCATGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
CDS-3UTR TCA 90 bp GGTCTAGTCAGCAGCAGAGTACAAAGGCCAGCACAGCCTCCACTAAGACCACAAGCCTCCAGAGGTCATTaGAGGCAGCATTGCAACTGC +
Preference number: 4 (lower is better)
Translates to: GLVSSRVQRPAQPPLRPQASRGH*RQHCNC
Trigger: GCAGTTGCAATGCTGCCTTCAATGACCTCTGGAGGC...TTGTGGTCTTAGTGGAGGCTGTGCTGGCCTTTGTACTCTGCTGCTGACTAGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
CDS-3UTR TCA 90 bp TCCCAAATGGCTGGTTGCAGTCGAGGCTCATTCTGTTTTCTCTGGAGGGACTGCCTTCATTTTCTACCTTaGGTGGCTGCCAGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: SQMAGCSRGSFCFLWRDCLHFLP*VAARPR
Trigger: CCTGGGCCTGGCAGCCACTCAAGGTAGAAAATGAAG...GCAGTCCCTCCAGAGAAAACAGAATGAGCCTCGACTGCAACCAGCCATTTGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
CDS-3UTR TCA 90 bp AGGGCAAGCCCAGCATTGCCTTCAACAAAACTCCAGTTTCCTTCTACCTTACTGCGCTTGGCGCCTGGCTaGAGACCACCACACACTGTC +
Preference number: 4 (lower is better)
Translates to: RASPALPSTKLQFPSTLLRLAPG*RPPHTV
Trigger: GACAGTGTGTGGTGGTCTTCAGCCAGGCGCCAAGCG...CAGTAAGGTAGAAGGAAACTGGAGTTTTGTTGAAGGCAATGCTGGGCTTGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
CDS-3UTR GCA 90 bp AAAAGACCAACGGACAGGAAGGAGGCAGACAGACGGATGGACGGCGGCTCTATAAGGCAGCATTGCAACTaGTCTGCGTACAGCCACCAA +
Preference number: 4 (lower is better)
Translates to: KRPTDRKEADRRMDGGSIRQHCN*SAYSHQ
Trigger: TTGGTGGCTGTACGCAGAGCAGTTGCAATGCTGCCT...TATAGAGCCGCCGTCCATCCGTCTGTCTGCCTCCTTCCTGTCCGTTGGTCTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
CDS-3UTR GCA 90 bp GCCTCCTGCAATCCTGCCTTCTCTCCTCTTCTTAAGTTAGGGGAGTTCCGAGACGCACTGTTTCTCCACTaGTCAGGCTCTGACTCCCAG +
Preference number: 4 (lower is better)
Translates to: ASCNPAFSPLLKLGEFRDALFLH*SGSDSQ
Trigger: CTGGGAGTCAGAGCCTGAGCAGTGGAGAAACAGTGC...GTCTCGGAACTCCCCTAACTTAAGAAGAGGAGAGAAGGCAGGATTGCAGGAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
CDS-3UTR CCA 90 bp GCCTCCTGCAATCCTGCCTTCTCTCCTCTTCTTAAGTTAGGGGAGTTCCGAGACGGCACTGGCCACATGTaGTGGGGTGTGAACACCATT +
Preference number: 4 (lower is better)
Translates to: ASCNPAFSPLLKLGEFRDGTGHM*WGVNTI
Trigger: AATGGTGTTCACACCCCACCACATGTGGCCAGTGCC...GTCTCGGAACTCCCCTAACTTAAGAAGAGGAGAGAAGGCAGGATTGCAGGAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
CDS-3UTR TCA 90 bp AGGAGGGGGCAGAGCGAGCACAGTGGAGCCAGAGGTTGGCTTTCATTCCCAAGGGTGTTCCTGGTATGGTaGAAGGAAGGACAGAATATA +
Preference number: 4 (lower is better)
Translates to: RRGQSEHSGARGWLSFPRVFLVW*KEGQNI
Trigger: TATATTCTGTCCTTCCTTTCACCATACCAGGAACAC...CCTTGGGAATGAAAGCCAACCTCTGGCTCCACTGTGCTCGCTCTGCCCCCTCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
CDS-3UTR GCA 90 bp CCCCTCTCCTGGTTGGCTGCACCTCTTCTAGGAAATGAAGTGAAGGCAGCAAGGGCATTGCAACTGCTCTaGGTACAGCCACCAAAGACA +
Preference number: 4 (lower is better)
Translates to: PLSWLAAPLLGNEVKAARALQLL*VQPPKT
Trigger: TGTCTTTGGTGGCTGTACGCAGAGCAGTTGCAATGC...CCTTGCTGCCTTCACTTCATTTCCTAGAAGAGGTGCAGCCAACCAGGAGAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
CDS-3UTR CCA 90 bp AAAAGACCAACGGACAGGAAGGAGGCAGACAGACGGATGGACGGCGGCTCTATAAGTGCAGTTTCTTCTTaGTCCACGGCCATGACACTG +
Preference number: 4 (lower is better)
Translates to: KRPTDRKEADRRMDGGSISAVSS*STAMTL
Trigger: CAGTGTCATGGCCGTGGACCAAGAAGAAACTGCACT...TATAGAGCCGCCGTCCATCCGTCTGTCTGCCTCCTTCCTGTCCGTTGGTCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
CDS-3UTR CCA 90 bp AGGGCAAGCCCAGCATTGCCTTCAACAAAACTCCAGTTTCCTTCTACCTTACTGGAGTGGCCCCAGCTTTaGGGGAAGGATAGGACCCTG +
Preference number: 4 (lower is better)
Translates to: RASPALPSTKLQFPSTLLEWPQL*GKDRTL
Trigger: CAGGGTCCTATCCTTCCCCCAAAGCTGGGGCCACTC...CAGTAAGGTAGAAGGAAACTGGAGTTTTGTTGAAGGCAATGCTGGGCTTGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
CDS-3UTR CCA 90 bp CATCATATAACTCAGGCTAAGCCCAAACCTGAAGTCATCCTGCCTCTGTCTGCCGCCGTCAGAGGCAGATaGAGTGCTTGGAGACACGAC +
Preference number: 4 (lower is better)
Translates to: HHITQAKPKPEVILPLSAAVRGR*SAWRHD
Trigger: GTCGTGTCTCCAAGCACTCCATCTGCCTCTGACGGC...GGCAGACAGAGGCAGGATGACTTCAGGTTTGGGCTTAGCCTGAGTTATATGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
3UTR CAA 72 bp ACAGCACTCAGGGACCATCAAGTCCCAAATGGCTGGTaGCAGTCGAGGCTCATTCTGTTTTCTCTGGAGGGA +
Preference number: 4 (lower is better)
Translates to: TALRDHQVPNGW*QSRLILFSLEG
Trigger: TCCCTCCAGAGAAAACAGAATGAGCCTCGACTGCAACCAGCCATTTGGGACTTGATGGTCCCTGAGTGCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
CDS-3UTR TCA 90 bp CATCATATAACTCAGGCTAAGCCCAAACCTGAAGTCATCCTGCCTCTGTCTGCCATCGGGGGTAAGGAATaGCCATCTCCTTGGGCTGGT +
Preference number: 4 (lower is better)
Translates to: HHITQAKPKPEVILPLSAIGGKE*PSPWAG
Trigger: ACCAGCCCAAGGAGATGGTCATTCCTTACCCCCGAT...GGCAGACAGAGGCAGGATGACTTCAGGTTTGGGCTTAGCCTGAGTTATATGATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
CDS-3UTR GCA 90 bp AAAAGACCAACGGACAGGAAGGAGGCAGACAGACGGATGGACGGCGGCTCTATACATTGTCCCTTCCAGTaGAGTTTCTTCTTGGTCCAC +
Preference number: 4 (lower is better)
Translates to: KRPTDRKEADRRMDGGSIHCPFQ*SFFLVH
Trigger: GTGGACCAAGAAGAAACTGCACTGGAAGGGACAATG...TATAGAGCCGCCGTCCATCCGTCTGTCTGCCTCCTTCCTGTCCGTTGGTCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
CDS-3UTR GCA 90 bp CATGAGGCTGAGGAGACCACAGTCTCCACTGCTGATTCACTTCCCACAGCAACAGTCGATACCACTGTTTaGAGACCAGAGCTGCAGTCT +
Preference number: 4 (lower is better)
Translates to: HEAEETTVSTADSLPTATVDTTV*RPELQS
Trigger: AGACTGCAGCTCTGGTCTGCAAACAGTGGTATCGAC...TGTTGCTGTGGGAAGTGAATCAGCAGTGGAGACTGTGGTCTCCTCAGCCTCATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
CDS-3UTR GCA 90 bp TCCCACTGCGGCGGCTGTCTGTCTTTCCAGGCTGAGCCTCCTGCAATCCTGCCTTCTAGCACATACATCTaGATAGGTTTGCAGTTCATA +
Preference number: 4 (lower is better)
Translates to: SHCGGCLSFQAEPPAILPSSTYI*IGLQFI
Trigger: TATGAACTGCAAACCTATGCAGATGTATGTGCTAGA...AGGCAGGATTGCAGGAGGCTCAGCCTGGAAAGACAGACAGCCGCCGCAGTGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
CDS-3UTR CCA 90 bp AGGGCAAGCCCAGCATTGCCTTCAACAAAACTCCAGTTTCCTTCTACCTTACTGTGTACACGACCAGAGTaGCCCCAGCTTTGGGGGAAG +
Preference number: 4 (lower is better)
Translates to: RASPALPSTKLQFPSTLLCTRPE*PQLWGK
Trigger: CTTCCCCCAAAGCTGGGGCCACTCTGGTCGTGTACA...CAGTAAGGTAGAAGGAAACTGGAGTTTTGTTGAAGGCAATGCTGGGCTTGCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
CDS-3UTR CCA 90 bp AGGGCAAGCCCAGCATTGCCTTCAACAAAACTCCAGTTTCCTTCTACCTTACTGACTCCCAGGGGAGCTTaGAGAAGACCCAAGAGGAGG +
Preference number: 4 (lower is better)
Translates to: RASPALPSTKLQFPSTLLTPRGA*RRPKRR
Trigger: CCTCCTCTTGGGTCTTCTCCAAGCTCCCCTGGGAGT...CAGTAAGGTAGAAGGAAACTGGAGTTTTGTTGAAGGCAATGCTGGGCTTGCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
3UTR CAA 72 bp CAAACCAACCAACCAACCAACCAACCCCTCTCCTGGTaGGCTGCACCTCTTCTAGGAAATGAAGTGAAGGCA +
Preference number: 4 (lower is better)
Translates to: QTNQPTNQPLSW*AAPLLGNEVKA
Trigger: TGCCTTCACTTCATTTCCTAGAAGAGGTGCAGCCAACCAGGAGAGGGGTTGGTTGGTTGGTTGGTTGGTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
3UTR CAA 72 bp TGCCTGTCTACTTGGGAGAAGTCGAAGAATCAACAGTaGACAGCCAGCTTAGGAAGGCCACAGGGGAAAGAG +
Preference number: 4 (lower is better)
Translates to: CLSTWEKSKNQQ*TASLGRPQGKE
Trigger: CTCTTTCCCCTGTGGCCTTCCTAAGCTGGCTGTCAACTGTTGATTCTTCGACTTCTCCCAAGTAGACAGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
CDS-3UTR TCA 90 bp GCCTCCTGCAATCCTGCCTTCTCTCCTCTTCTTAAGTTAGGGGAGTTCCGAGACGACGGCGAGTACGTGTaGATTTCATCAAAGAATCTC +
Preference number: 4 (lower is better)
Translates to: ASCNPAFSPLLKLGEFRDDGEYV*ISSKNL
Trigger: GAGATTCTTTGATGAAATTCACACGTACTCGCCGTC...GTCTCGGAACTCCCCTAACTTAAGAAGAGGAGAGAAGGCAGGATTGCAGGAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
CDS-3UTR TCA 90 bp TCCCAAATGGCTGGTTGCAGTCGAGGCTCATTCTGTTTTCTCTGGAGGGACTGCACAAATTTCCACCATTaGGAATGGGAGAGCCATCTC +
Preference number: 4 (lower is better)
Translates to: SQMAGCSRGSFCFLWRDCTNFHH*EWESHL
Trigger: GAGATGGCTCTCCCATTCTCAATGGTGGAAATTTGT...GCAGTCCCTCCAGAGAAAACAGAATGAGCCTCGACTGCAACCAGCCATTTGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
CDS-3UTR CCA 90 bp TCCCAAATGGCTGGTTGCAGTCGAGGCTCATTCTGTTTTCTCTGGAGGGACTGCCCGGCAGCTCAGACATaGACCTATTATGTCTTGTTT +
Preference number: 4 (lower is better)
Translates to: SQMAGCSRGSFCFLWRDCPAAQT*TYYVLF
Trigger: AAACAAGACATAATAGGTCCATGTCTGAGCTGCCGG...GCAGTCCCTCCAGAGAAAACAGAATGAGCCTCGACTGCAACCAGCCATTTGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
CDS-3UTR CCA 90 bp TGCCGCTGGGAAACACGCTGCTGTCCTTTCAATTTCAGTTTTAAAGGTAAAATACCCCTGCAAGGGCACTaGCCACATGTGGTGGGGTGT +
Preference number: 4 (lower is better)
Translates to: CRWETRCCPFNFSFKGKIPLQGH*PHVVGC
Trigger: ACACCCCACCACATGTGGCCAGTGCCCTTGCAGGGG...TATTTTACCTTTAAAACTGAAATTGAAAGGACAGCAGCGTGTTTCCCAGCGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
CDS-3UTR CCA 90 bp AAGTCTCAGTCCAAATGTTTGCACACTGGAAAATTCCAAATTAAAGGACACAGAAGGGACTGTGGAGGGTaGTGGCCCAGGCGCCGAGCA +
Preference number: 4 (lower is better)
Translates to: KSQSKCLHTGKFQIKGHRRDCGG*WPRRRA
Trigger: TGCTCGGCGCCTGGGCCACCACCCTCCACAGTCCCT...TCTGTGTCCTTTAATTTGGAATTTTCCAGTGTGCAAACATTTGGACTGAGACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
CDS-3UTR CCA 90 bp AAAAGACCAACGGACAGGAAGGAGGCAGACAGACGGATGGACGGCGGCTCTATATTGCAGTTCATACTCTaGTACAAGGGTTTACCCACA +
Preference number: 4 (lower is better)
Translates to: KRPTDRKEADRRMDGGSILQFIL*YKGLPT
Trigger: TGTGGGTAAACCCTTGTACCAGAGTATGAACTGCAA...TATAGAGCCGCCGTCCATCCGTCTGTCTGCCTCCTTCCTGTCCGTTGGTCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
CDS-3UTR CCA 90 bp TGCCGCTGGGAAACACGCTGCTGTCCTTTCAATTTCAGTTTTAAAGGTAAAATACTCGAGGGTGTGGACTaGGGCCAGAGATGTTCGGCT +
Preference number: 4 (lower is better)
Translates to: CRWETRCCPFNFSFKGKILEGVD*GQRCSA
Trigger: AGCCGAACATCTCTGGCCCCAGTCCACACCCTCGAG...TATTTTACCTTTAAAACTGAAATTGAAAGGACAGCAGCGTGTTTCCCAGCGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
3UTR CAA 72 bp AGCAATGCTAGGCTGCTTATCTGCTGGCCTTATCTCTaGAGTCAAGATCCCACAGGATCAGTCTTGGCCAAA +
Preference number: 4 (lower is better)
Translates to: SNARLLICWPYL*SQDPTGSVLAK
Trigger: TTTGGCCAAGACTGATCCTGTGGGATCTTGACTCAAGAGATAAGGCCAGCAGATAAGCAGCCTAGCATTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
3UTR CAA 72 bp ACCCTGGACTCCTTCAGATCCTCCCCGCTGTCATTTTaGCTGGTGACCACAGATAATGCAAATAGAGTACGT +
Preference number: 4 (lower is better)
Translates to: TLDSFRSSPLSF*LVTTDNANRVR
Trigger: ACGTACTCTATTTGCATTATCTGTGGTCACCAGCAAAAATGACAGCGGGGAGGATCTGAAGGAGTCCAGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
CDS-3UTR TCA 90 bp TGCCGCTGGGAAACACGCTGCTGTCCTTTCAATTTCAGTTTTAAAGGTAAAATAGTCCGGCTCTCCCACTaGATGTTTCCTTCCTGGACA +
Preference number: 4 (lower is better)
Translates to: CRWETRCCPFNFSFKGKIVRLSH*MFPSWT
Trigger: TGTCCAGGAAGGAAACATTCAGTGGGAGAGCCGGAC...TATTTTACCTTTAAAACTGAAATTGAAAGGACAGCAGCGTGTTTCCCAGCGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
CDS-3UTR CCA 90 bp AAGTCTCAGTCCAAATGTTTGCACACTGGAAAATTCCAAATTAAAGGACACAGAGTCCTGGGCGGGAGTTaGGCACTGTTTCTCCACTGC +
Preference number: 4 (lower is better)
Translates to: KSQSKCLHTGKFQIKGHRVLGGS*ALFLHC
Trigger: GCAGTGGAGAAACAGTGCCCAACTCCCGCCCAGGAC...TCTGTGTCCTTTAATTTGGAATTTTCCAGTGTGCAAACATTTGGACTGAGACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
3UTR CAA 72 bp CCCAGCCTGGAGCAAGTTAGGCATGGAATTGGAGTTTaGGTTTATGGGAGTTGCATTGTTTTCCCAAGTCTC +
Preference number: 4 (lower is better)
Translates to: PSLEQVRHGIGV*VYGSCIVFPSL
Trigger: GAGACTTGGGAAAACAATGCAACTCCCATAAACCAAAACTCCAATTCCATGCCTAACTTGCTCCAGGCTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
CDS-3UTR CCA 90 bp AAGTCTCAGTCCAAATGTTTGCACACTGGAAAATTCCAAATTAAAGGACACAGAACCTCCAACACTGGGTaGGGGTCCTCATCTTGCTCC +
Preference number: 4 (lower is better)
Translates to: KSQSKCLHTGKFQIKGHRTSNTG*GSSSCS
Trigger: GGAGCAAGATGAGGACCCCCACCCAGTGTTGGAGGT...TCTGTGTCCTTTAATTTGGAATTTTCCAGTGTGCAAACATTTGGACTGAGACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
CDS-3UTR GCA 90 bp GCATTGTTTTCCCAAGTCTCAGTCCAAATGTTTGCACACTGGAAAATTCCAAATTGGGGGTCCTCATCTTaGTCCATTGTCCCTTCCAGT +
Preference number: 4 (lower is better)
Translates to: ALFSQVSVQMFAHWKIPNWGSSS*SIVPSS
Trigger: ACTGGAAGGGACAATGGAGCAAGATGAGGACCCCCA...ATTTGGAATTTTCCAGTGTGCAAACATTTGGACTGAGACTTGGGAAAACAATGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
CDS-3UTR TCA 90 bp AAGTCTCAGTCCAAATGTTTGCACACTGGAAAATTCCAAATTAAAGGACACAGACCTGGACAGCCTTCATaGAGCCATGGTAACACTGGT +
Preference number: 4 (lower is better)
Translates to: KSQSKCLHTGKFQIKGHRPGQPS*SHGNTG
Trigger: ACCAGTGTTACCATGGCTTCATGAAGGCTGTCCAGG...TCTGTGTCCTTTAATTTGGAATTTTCCAGTGTGCAAACATTTGGACTGAGACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
CDS-3UTR TCA 90 bp GCATTGTTTTCCCAAGTCTCAGTCCAAATGTTTGCACACTGGAAAATTCCAAATTGGATGACATCGCTTTaGTGGCTTCCAAACTCCGAC +
Preference number: 4 (lower is better)
Translates to: ALFSQVSVQMFAHWKIPNWMTSL*WLPNSD
Trigger: GTCGGAGTTTGGAAGCCATCAAAGCGATGTCATCCA...ATTTGGAATTTTCCAGTGTGCAAACATTTGGACTGAGACTTGGGAAAACAATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
3UTR CAA 72 bp GGCATGGAATTGGAGTTTTGGTTTATGGGAGTTGCATaGTTTTCCCAAGTCTCAGTCCAAATGTTTGCACAC +
Preference number: 4 (lower is better)
Translates to: GMELEFWFMGVA*FSQVSVQMFAH
Trigger: GTGTGCAAACATTTGGACTGAGACTTGGGAAAACAATGCAACTCCCATAAACCAAAACTCCAATTCCATGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
3UTR CAA 72 bp CTTTCTAAGAGGTTAAGATTTCTGTTGCCTGTCTACTaGGGAGAAGTCGAAGAATCAACAGTTGACAGCCAG +
Preference number: 4 (lower is better)
Translates to: LSKRLRFLLPVY*GEVEESTVDSQ
Trigger: CTGGCTGTCAACTGTTGATTCTTCGACTTCTCCCAAGTAGACAGGCAACAGAAATCTTAACCTCTTAGAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
CDS-3UTR CCA 90 bp AAGTCTCAGTCCAAATGTTTGCACACTGGAAAATTCCAAATTAAAGGACACAGACAAGGCGTTTGTCTTTaGGTAGTACTTCACATTCTG +
Preference number: 4 (lower is better)
Translates to: KSQSKCLHTGKFQIKGHRQGVCL*VVLHIL
Trigger: CAGAATGTGAAGTACTACCCAAAGACAAACGCCTTG...TCTGTGTCCTTTAATTTGGAATTTTCCAGTGTGCAAACATTTGGACTGAGACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
3UTR CAA 72 bp CAACTATGGTTTTTGGCAACTTGCAACCAAACACGATaGTCGGAAAATTCCCTAATCAGACATTTGAATGTT +
Preference number: 4 (lower is better)
Translates to: QLWFLATCNQTR*SENSLIRHLNV
Trigger: AACATTCAAATGTCTGATTAGGGAATTTTCCGACAATCGTGTTTGGTTGCAAGTTGCCAAAAACCATAGTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
3UTR CAA 72 bp TTGTCGGAAAATTCCCTAATCAGACATTTGAATGTTTaGCTAAGACATGTAGGGAGAACTCAAAAAGACCAA +
Preference number: 4 (lower is better)
Translates to: LSENSLIRHLNV*LRHVGRTQKDQ
Trigger: TTGGTCTTTTTGAGTTCTCCCTACATGTCTTAGCAAAACATTCAAATGTCTGATTAGGGAATTTTCCGACAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
CDS TCA 90 bp CTCTCGGGTCTCAGGAACCAGGGCTGGAGGAGTGGCACTGATAGGTaGCGGGCGAGAGTTCAAACTGGGGCTGAGGGGCGCTCTCCCGCT +
Preference number: 5 (lower is better)
Translates to: LSGLRNQGWRSGTDR*RARVQTGAEGRSPA
Trigger: AGCGGGAGAGCGCCCCTCAGCCCCAGTTTGAACTCTCGCCCGTCACCTATCAGTGCCACTCCTCCAGCCCTGGTTCCTGAGACCCGAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
CDS TCA 90 bp TGTGGAGGGTGGTGGCCCAGGCGCCGAGCAATCGGGGGTAAGGAATaGCCATCTCCTTGGGCTGGTCCTGGGCGGGAGTTGGGCACTGTT +
Preference number: 5 (lower is better)
Translates to: CGGWWPRRRAIGGKE*PSPWAGPGRELGTV
Trigger: AACAGTGCCCAACTCCCGCCCAGGACCAGCCCAAGGAGATGGTCATTCCTTACCCCCGATTGCTCGGCGCCTGGGCCACCACCCTCCACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
CDS CCA 90 bp CGGCCATTAACACAGGGCGCTTCGTCCATACTCCTCACCGGGGACTaGGAGCGGTACTCTCGGGTCTCAGGAACCAGGGCTGGAGGAGTG +
Preference number: 5 (lower is better)
Translates to: RPLTQGASSILLTGD*ERYSRVSGTRAGGV
Trigger: CACTCCTCCAGCCCTGGTTCCTGAGACCCGAGAGTACCGCTCCCAGTCCCCGGTGAGGAGTATGGACGAAGCGCCCTGTGTTAATGGCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
CDS GCA 90 bp GGGTGTGGACTGGGGCCAGAGATGTTCGGCTTGGACCACGCCCACTaGTCCAGGTCCAGGACCCAGACTTCATTGCTCATCTGCCGGGAT +
Preference number: 5 (lower is better)
Translates to: GCGLGPEMFGLDHAH*SRSRTQTSLLICRD
Trigger: ATCCCGGCAGATGAGCAATGAAGTCTGGGTCCTGGACCTGGAGCAGTGGGCGTGGTCCAAGCCGAACATCTCTGGCCCCAGTCCACACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
CDS GCA 90 bp CTCCTTGGGCTGGTCCTGGGCGGGAGTTGGGCACTGTTTCTCCACTaGTCAGGCTCTGACTCCCAGGGGAGCTTGGAGAAGACCCAAGAG +
Preference number: 5 (lower is better)
Translates to: LLGLVLGGSWALFLH*SGSDSQGSLEKTQE
Trigger: CTCTTGGGTCTTCTCCAAGCTCCCCTGGGAGTCAGAGCCTGAGCAGTGGAGAAACAGTGCCCAACTCCCGCCCAGGACCAGCCCAAGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
CDS-3UTR CAA 90 bp GCCGCAGCAGGCTCGTGCCTGGGAGATGCGGGGACAGGGGAATGGGAGACTGCCTCATTGAAGGCAGCATaGCAACTGCTCTGCGTACAG +
Preference number: 5 (lower is better)
Translates to: AAAGSCLGDAGTGEWETASLKAA*QLLCVQ
Trigger: CTGTACGCAGAGCAGTTGCAATGCTGCCTTCAATGA...GGCAGTCTCCCATTCCCCTGTCCCCGCATCTCCCAGGCACGAGCCTGCTGCGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
CDS GCA 90 bp GATGGCTTCCAAACTCCGACGCAGGGCACCGGGAGATACAGCCCCTaGAAGGGCACTGGCCACATGTGGTGGGGTGTGAACACCATTGGT +
Preference number: 5 (lower is better)
Translates to: DGFQTPTQGTGRYSP*KGTGHMWWGVNTIG
Trigger: ACCAATGGTGTTCACACCCCACCACATGTGGCCAGTGCCCTTGCAGGGGCTGTATCTCCCGGTGCCCTGCGTCGGAGTTTGGAAGCCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
CDS CCA 90 bp CAGGGCACCGGGAGATACAGCCCCTGCAAGGGCACTGGCCACATGTaGTGGGGTGTGAACACCATTGGTCTGTTCTGGAGGGTGTCTCAC +
Preference number: 5 (lower is better)
Translates to: QGTGRYSPCKGTGHM*WGVNTIGLFWRVSH
Trigger: GTGAGACACCCTCCAGAACAGACCAATGGTGTTCACACCCCACCACATGTGGCCAGTGCCCTTGCAGGGGCTGTATCTCCCGGTGCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
CDS CCA 90 bp AACTCCGACGCAGGGCACCGGGAGATACAGCCCCTGCAAGGGCACTaGCCACATGTGGTGGGGTGTGAACACCATTGGTCTGTTCTGGAG +
Preference number: 5 (lower is better)
Translates to: NSDAGHREIQPLQGH*PHVVGCEHHWSVLE
Trigger: CTCCAGAACAGACCAATGGTGTTCACACCCCACCACATGTGGCCAGTGCCCTTGCAGGGGCTGTATCTCCCGGTGCCCTGCGTCGGAGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
CDS-3UTR CAA 90 bp TCCCACTGCGGCGGCTGTCTGTCTTTCCAGGCTGAGCCTCCTGCAATCCTGCCTAGGCAGATGGAGTGCTaGGAGACACGACCTGTACGG +
Preference number: 5 (lower is better)
Translates to: SHCGGCLSFQAEPPAILPRQMEC*ETRPVR
Trigger: CCGTACAGGTCGTGTCTCCAAGCACTCCATCTGCCT...AGGCAGGATTGCAGGAGGCTCAGCCTGGAAAGACAGACAGCCGCCGCAGTGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
CDS TCA 90 bp GACTTAGTGCTGCCGAGGCTGAGGGGCCTTTGGATGACATCGCTTTaGTGGCTTCCAAACTCCGACGCAGGGCACCGGGAGATACAGCCC +
Preference number: 5 (lower is better)
Translates to: DLVLPRLRGLWMTSL*WLPNSDAGHREIQP
Trigger: GGGCTGTATCTCCCGGTGCCCTGCGTCGGAGTTTGGAAGCCATCAAAGCGATGTCATCCAAAGGCCCCTCAGCCTCGGCAGCACTAAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
CDS TCA 90 bp GGTCCTGGGCGGGAGTTGGGCACTGTTTCTCCACTGCTCAGGCTCTaGCTCCCAGGGGAGCTTGGAGAAGACCCAAGAGGAGGACTTAGT +
Preference number: 5 (lower is better)
Translates to: GPGRELGTVSPLLRL*LPGELGEDPRGGLS
Trigger: ACTAAGTCCTCCTCTTGGGTCTTCTCCAAGCTCCCCTGGGAGTCAGAGCCTGAGCAGTGGAGAAACAGTGCCCAACTCCCGCCCAGGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
CDS CCA 90 bp GGCACCGGGAGATACAGCCCCTGCAAGGGCACTGGCCACATGTGGTaGGGTGTGAACACCATTGGTCTGTTCTGGAGGGTGTCTCACACT +
Preference number: 5 (lower is better)
Translates to: GTGRYSPCKGTGHMW*GVNTIGLFWRVSHT
Trigger: AGTGTGAGACACCCTCCAGAACAGACCAATGGTGTTCACACCCCACCACATGTGGCCAGTGCCCTTGCAGGGGCTGTATCTCCCGGTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
CDS-3UTR CAA 90 bp CGGGGACAGGGGAATGGGAGACTGCCGCTGGGAAACACGCTGCTGTCCTTTCAAGTGGGGGTCCTCATCTaGCTCCATTGTCCCTTCCAG +
Preference number: 5 (lower is better)
Translates to: RGQGNGRLPLGNTLLSFQVGVLI*LHCPFQ
Trigger: CTGGAAGGGACAATGGAGCAAGATGAGGACCCCCAC...TTGAAAGGACAGCAGCGTGTTTCCCAGCGGCAGTCTCCCATTCCCCTGTCCCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
CDS TCA 90 bp GGAGATACAGCCCCTGCAAGGGCACTGGCCACATGTGGTGGGGTGTaGACACCATTGGTCTGTTCTGGAGGGTGTCTCACACTCCCTGCA +
Preference number: 5 (lower is better)
Translates to: GDTAPARALATCGGV*TPLVCSGGCLTLPA
Trigger: TGCAGGGAGTGTGAGACACCCTCCAGAACAGACCAATGGTGTTCACACCCCACCACATGTGGCCAGTGCCCTTGCAGGGGCTGTATCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
CDS CCA 90 bp CCCCTGCAAGGGCACTGGCCACATGTGGTGGGGTGTGAACACCATTaGTCTGTTCTGGAGGGTGTCTCACACTCCCTGCAACTGTCCTGT +
Preference number: 5 (lower is better)
Translates to: PLQGHWPHVVGCEHH*SVLEGVSHSLQLSC
Trigger: ACAGGACAGTTGCAGGGAGTGTGAGACACCCTCCAGAACAGACCAATGGTGTTCACACCCCACCACATGTGGCCAGTGCCCTTGCAGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
CDS GCA 90 bp TCTTCATTTTCTACCTTGAGTGGCTGCCAGGCCCAGGGACCTGGGTaGATGTGCAGCAGCCAGGCATCTTTGAACAGCGCATTGGGACCG +
Preference number: 5 (lower is better)
Translates to: SSFSTLSGCQAQGPG*MCSSQASLNSALGP
Trigger: CGGTCCCAATGCGCTGTTCAAAGATGCCTGGCTGCTGCACATGCACCCAGGTCCCTGGGCCTGGCAGCCACTCAAGGTAGAAAATGAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
CDS CCA 90 bp AGACAAATTTCCACCATTGAGAATGGGAGAGCCATCTCCTCTGGCTaGGGAGAGGCTCCCTTCCCGGGAACCCGAGGGAGTCTGCCTTTG +
Preference number: 5 (lower is better)
Translates to: RQISTIENGRAISSG*GEAPFPGTRGSLPL
Trigger: CAAAGGCAGACTCCCTCGGGTTCCCGGGAAGGGAGCCTCTCCCCAGCCAGAGGAGATGGCTCTCCCATTCTCAATGGTGGAAATTTGTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
CDS-3UTR CAA 90 bp TCCCACTGCGGCGGCTGTCTGTCTTTCCAGGCTGAGCCTCCTGCAATCCTGCCTTGGTGGGCCACACCTTaGATAAGTCGATACCACTGT +
Preference number: 5 (lower is better)
Translates to: SHCGGCLSFQAEPPAILPWWATP*ISRYHC
Trigger: ACAGTGGTATCGACTTATCAAAGGTGTGGCCCACCA...AGGCAGGATTGCAGGAGGCTCAGCCTGGAAAGACAGACAGCCGCCGCAGTGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
CDS-3UTR CAA 90 bp GCCTCCTGCAATCCTGCCTTCTCTCCTCTTCTTAAGTTAGGGGAGTTCCGAGACGGAATGACCATCTCCTaGGGCTGGTCCTGGGCGGGA +
Preference number: 5 (lower is better)
Translates to: ASCNPAFSPLLKLGEFRDGMTIS*GWSWAG
Trigger: TCCCGCCCAGGACCAGCCCAAGGAGATGGTCATTCC...GTCTCGGAACTCCCCTAACTTAAGAAGAGGAGAGAAGGCAGGATTGCAGGAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
CDS TCA 90 bp AAGCACCCCCGACAGCTACTGTCCCTGGAGACAAATTTCCACCATTaGGAATGGGAGAGCCATCTCCTCTGGCTGGGGAGAGGCTCCCTT +
Preference number: 5 (lower is better)
Translates to: KHPRQLLSLETNFHH*EWESHLLWLGRGSL
Trigger: AAGGGAGCCTCTCCCCAGCCAGAGGAGATGGCTCTCCCATTCTCAATGGTGGAAATTTGTCTCCAGGGACAGTAGCTGTCGGGGGTGCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
CDS CCA 90 bp ATGGTCTTCATTTTCTACCTTGAGTGGCTGCCAGGCCCAGGGACCTaGGTGCATGTGCAGCAGCCAGGCATCTTTGAACAGCGCATTGGG +
Preference number: 5 (lower is better)
Translates to: MVFIFYLEWLPGPGT*VHVQQPGIFEQRIG
Trigger: CCCAATGCGCTGTTCAAAGATGCCTGGCTGCTGCACATGCACCCAGGTCCCTGGGCCTGGCAGCCACTCAAGGTAGAAAATGAAGACCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
CDS-3UTR CAA 90 bp GGGACCAGGCACAGGGCGCTTCTACAGAGCCATCATGGGTCCTCTGTGGCTGACTTGGATGACATCGCTTaGATGGCTTCCAAACTCCGA +
Preference number: 5 (lower is better)
Translates to: GTRHRALLQSHHGSSVADLDDIA*MASKLR
Trigger: TCGGAGTTTGGAAGCCATCAAAGCGATGTCATCCAA...GTCAGCCACAGAGGACCCATGATGGCTCTGTAGAAGCGCCCTGTGCCTGGTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
CDS-3UTR CAA 90 bp GCCTCCTGCAATCCTGCCTTCTCTCCTCTTCTTAAGTTAGGGGAGTTCCGAGACGACTCCCAGGGGAGCTaGGAGAAGACCCAAGAGGAG +
Preference number: 5 (lower is better)
Translates to: ASCNPAFSPLLKLGEFRDDSQGS*EKTQEE
Trigger: CTCCTCTTGGGTCTTCTCCAAGCTCCCCTGGGAGTC...GTCTCGGAACTCCCCTAACTTAAGAAGAGGAGAGAAGGCAGGATTGCAGGAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
CDS GCA 90 bp TCACCTATCACACAGGAGGAATGGCCAGCCATGGGAGGAGGCCCATaGGTGGTGACAATGCAGTTCCACCAGTTTTTAGACGGCGAGTAC +
Preference number: 5 (lower is better)
Translates to: SPITQEEWPAMGGGP*VVTMQFHQFLDGEY
Trigger: GTACTCGCCGTCTAAAAACTGGTGGAACTGCATTGTCACCACGCATGGGCCTCCTCCCATGGCTGGCCATTCCTCCTGTGTGATAGGTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
CDS GCA 90 bp GAGAAAGTCCTACTTTTAGGTCGTAGCCGTCAGAGGCAGATGGAGTaGTTGGAGACACGACCTGTACGGGGCTGTCTAAGGAAGCACCCC +
Preference number: 5 (lower is better)
Translates to: EKVLLLGRSRQRQME*LETRPVRGCLRKHP
Trigger: GGGGTGCTTCCTTAGACAGCCCCGTACAGGTCGTGTCTCCAAGCACTCCATCTGCCTCTGACGGCTACGACCTAAAAGTAGGACTTTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
CDS CCA 90 bp AGTTGTATCATCTATAACAATCTGAGACTGGCCACCTCGAGGGTGTaGACTGGGGCCAGAGATGTTCGGCTTGGACCACGCCCACTGCTC +
Preference number: 5 (lower is better)
Translates to: SCIIYNNLRLATSRV*TGARDVRLGPRPLL
Trigger: GAGCAGTGGGCGTGGTCCAAGCCGAACATCTCTGGCCCCAGTCCACACCCTCGAGGTGGCCAGTCTCAGATTGTTATAGATGATACAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
CDS-3UTR CAA 90 bp CATCATATAACTCAGGCTAAGCCCAAACCTGAAGTCATCCTGCCTCTGTCTGCCCCAGAGATGTTCGGCTaGGACCACGCCCACTGCTCC +
Preference number: 5 (lower is better)
Translates to: HHITQAKPKPEVILPLSAPEMFG*DHAHCS
Trigger: GGAGCAGTGGGCGTGGTCCAAGCCGAACATCTCTGG...GGCAGACAGAGGCAGGATGACTTCAGGTTTGGGCTTAGCCTGAGTTATATGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
CDS GCA 90 bp TGTCTTGTTTCCTCAACCTCCAACACTGGGTGGGGGTCCTCATCTTaGTCCATTGTCCCTTCCAGTGCAGTTTCTTCTTGGTCCACGGCC +
Preference number: 5 (lower is better)
Translates to: CLVSSTSNTGWGSSS*SIVPSSAVSSWSTA
Trigger: GGCCGTGGACCAAGAAGAAACTGCACTGGAAGGGACAATGGAGCAAGATGAGGACCCCCACCCAGTGTTGGAGGTTGAGGAAACAAGACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
CDS CCA 90 bp GGCACTGGCCACATGTGGTGGGGTGTGAACACCATTGGTCTGTTCTaGAGGGTGTCTCACACTCCCTGCAACTGTCCTGTTGTCTATACT +
Preference number: 5 (lower is better)
Translates to: GTGHMWWGVNTIGLF*RVSHTPCNCPVVYT
Trigger: AGTATAGACAACAGGACAGTTGCAGGGAGTGTGAGACACCCTCCAGAACAGACCAATGGTGTTCACACCCCACCACATGTGGCCAGTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
CDS-3UTR CAA 90 bp TCCCACTGCGGCGGCTGTCTGTCTTTCCAGGCTGAGCCTCCTGCAATCCTGCCTTGGACCTATTATGTCTaGTTTCCTCAACCTCCAACA +
Preference number: 5 (lower is better)
Translates to: SHCGGCLSFQAEPPAILPWTYYV*FPQPPT
Trigger: TGTTGGAGGTTGAGGAAACAAGACATAATAGGTCCA...AGGCAGGATTGCAGGAGGCTCAGCCTGGAAAGACAGACAGCCGCCGCAGTGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
CDS-3UTR CAA 90 bp CGGGGACAGGGGAATGGGAGACTGCCGCTGGGAAACACGCTGCTGTCCTTTCAAGACAAATTTCCACCATaGAGAATGGGAGAGCCATCT +
Preference number: 5 (lower is better)
Translates to: RGQGNGRLPLGNTLLSFQDKFPP*RMGEPS
Trigger: AGATGGCTCTCCCATTCTCAATGGTGGAAATTTGTC...TTGAAAGGACAGCAGCGTGTTTCCCAGCGGCAGTCTCCCATTCCCCTGTCCCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
CDS TCA 90 bp CCACACCCGCCAAGGATCAGAAGAGTTGTATCATCTATAACAATCTaGGACTGGCCACCTCGAGGGTGTGGACTGGGGCCAGAGATGTTC +
Preference number: 5 (lower is better)
Translates to: PHPPRIRRVVSSITI*DWPPRGCGLGPEMF
Trigger: GAACATCTCTGGCCCCAGTCCACACCCTCGAGGTGGCCAGTCTCAGATTGTTATAGATGATACAACTCTTCTGATCCTTGGCGGGTGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
CDS GCA 90 bp CAACACTGGGTGGGGGTCCTCATCTTGCTCCATTGTCCCTTCCAGTaGAGTTTCTTCTTGGTCCACGGCCATGACACTGTCATCTTCACT +
Preference number: 5 (lower is better)
Translates to: QHWVGVLILLHCPFQ*SFFLVHGHDTVIFT
Trigger: AGTGAAGATGACAGTGTCATGGCCGTGGACCAAGAAGAAACTGCACTGGAAGGGACAATGGAGCAAGATGAGGACCCCCACCCAGTGTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
CDS-3UTR CAA 90 bp GCCTCCTGCAATCCTGCCTTCTCTCCTCTTCTTAAGTTAGGGGAGTTCCGAGACAGTCGATACCACTGTTaGCAGACCAGAGCTGCAGTC +
Preference number: 5 (lower is better)
Translates to: ASCNPAFSPLLKLGEFRDSRYHC*QTRAAV
Trigger: GACTGCAGCTCTGGTCTGCAAACAGTGGTATCGACT...GTCTCGGAACTCCCCTAACTTAAGAAGAGGAGAGAAGGCAGGATTGCAGGAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
CDS-3UTR CAA 90 bp CAAGTCCCAAATGGCTGGTTGCAGTCGAGGCTCATTCTGTTTTCTCTGGAGGGAAGCACTAGCAAGTCCTaGTACACGACCAGAGTGGCC +
Preference number: 5 (lower is better)
Translates to: QVPNGWLQSRLILFSLEGSTSKS*YTTRVA
Trigger: GGCCACTCTGGTCGTGTACAAGGACTTGCTAGTGCT...TCCCTCCAGAGAAAACAGAATGAGCCTCGACTGCAACCAGCCATTTGGGACTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
CDS-3UTR CAA 90 bp TCCCAAATGGCTGGTTGCAGTCGAGGCTCATTCTGTTTTCTCTGGAGGGACTGCGATAGGGACTTGGCCTaGTCCAGCCACCAAATAGCA +
Preference number: 5 (lower is better)
Translates to: SQMAGCSRGSFCFLWRDCDRDLA*SSHQIA
Trigger: TGCTATTTGGTGGCTGGACAAGGCCAAGTCCCTATC...GCAGTCCCTCCAGAGAAAACAGAATGAGCCTCGACTGCAACCAGCCATTTGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
CDS-3UTR CAA 90 bp GCCTCCTGCAATCCTGCCTTCTCTCCTCTTCTTAAGTTAGGGGAGTTCCGAGACGTGAACACTTTCCACTaGACTCGGCCCTTCTCCTTG +
Preference number: 5 (lower is better)
Translates to: ASCNPAFSPLLKLGEFRDVNTFH*TRPFSL
Trigger: CAAGGAGAAGGGCCGAGTCAAGTGGAAAGTGTTCAC...GTCTCGGAACTCCCCTAACTTAAGAAGAGGAGAGAAGGCAGGATTGCAGGAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
CDS-3UTR CAA 90 bp GAAGCTCTGTGCAGGAGCAGAGCAGCGCCCAGAACTCTCACAGGCCAACCAAATTTCACATTCTGCTTCTaGTCCATGAGCCCTCCAAAT +
Preference number: 5 (lower is better)
Translates to: EALCRSRAAPRTLTGQPNFTFCF*SMSPPN
Trigger: ATTTGGAGGGCTCATGGACAAGAAGCAGAATGTGAA...ATTTGGTTGGCCTGTGAGAGTTCTGGGCGCTGCTCTGCTCCTGCACAGAGCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
CDS CCA 90 bp CTCAGACATGGACCTATTATGTCTTGTTTCCTCAACCTCCAACACTaGGTGGGGGTCCTCATCTTGCTCCATTGTCCCTTCCAGTGCAGT +
Preference number: 5 (lower is better)
Translates to: LRHGPIMSCFLNLQH*VGVLILLHCPFQCS
Trigger: ACTGCACTGGAAGGGACAATGGAGCAAGATGAGGACCCCCACCCAGTGTTGGAGGTTGAGGAAACAAGACATAATAGGTCCATGTCTGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
CDS-3UTR CAA 90 bp CATCATATAACTCAGGCTAAGCCCAAACCTGAAGTCATCCTGCCTCTGTCTGCCCAGTGCAGTTTCTTCTaGGTCCACGGCCATGACACT +
Preference number: 5 (lower is better)
Translates to: HHITQAKPKPEVILPLSAQCSFF*VHGHDT
Trigger: AGTGTCATGGCCGTGGACCAAGAAGAAACTGCACTG...GGCAGACAGAGGCAGGATGACTTCAGGTTTGGGCTTAGCCTGAGTTATATGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
CDS-3UTR CAA 90 bp CATCATATAACTCAGGCTAAGCCCAAACCTGAAGTCATCCTGCCTCTGTCTGCCAGCCTCCAGAGGTCATaGAAGGCAGCATTGCAACTG +
Preference number: 5 (lower is better)
Translates to: HHITQAKPKPEVILPLSASLQRS*KAALQL
Trigger: CAGTTGCAATGCTGCCTTCAATGACCTCTGGAGGCT...GGCAGACAGAGGCAGGATGACTTCAGGTTTGGGCTTAGCCTGAGTTATATGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
CDS-3UTR CAA 90 bp CATCATATAACTCAGGCTAAGCCCAAACCTGAAGTCATCCTGCCTCTGTCTGCCTCTTCATTTTCTACCTaGAGTGGCTGCCAGGCCCAG +
Preference number: 5 (lower is better)
Translates to: HHITQAKPKPEVILPLSASSFST*SGCQAQ
Trigger: CTGGGCCTGGCAGCCACTCAAGGTAGAAAATGAAGA...GGCAGACAGAGGCAGGATGACTTCAGGTTTGGGCTTAGCCTGAGTTATATGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
CDS-3UTR CAA 90 bp GAAGCTCTGTGCAGGAGCAGAGCAGCGCCCAGAACTCTCACAGGCCAACCAAATACAAGGCGTTTGTCTTaGGGTAGTACTTCACATTCT +
Preference number: 5 (lower is better)
Translates to: EALCRSRAAPRTLTGQPNTRRLS*GSTSHS
Trigger: AGAATGTGAAGTACTACCCAAAGACAAACGCCTTGT...ATTTGGTTGGCCTGTGAGAGTTCTGGGCGCTGCTCTGCTCCTGCACAGAGCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
CDS GCA 90 bp GGTGTGAACACCATTGGTCTGTTCTGGAGGGTGTCTCACACTCCCTaGAACTGTCCTGTTGTCTATACTATCCACGTGACTACTACTGGA +
Preference number: 5 (lower is better)
Translates to: GVNTIGLFWRVSHTP*NCPVVYTIHVTTTG
Trigger: TCCAGTAGTAGTCACGTGGATAGTATAGACAACAGGACAGTTGCAGGGAGTGTGAGACACCCTCCAGAACAGACCAATGGTGTTCACACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
CDS-3UTR CAA 90 bp AAAAGACCAACGGACAGGAAGGAGGCAGACAGACGGATGGACGGCGGCTCTATACAAAGTACAAGGCGTTaGTCTTTGGGTAGTACTTCA +
Preference number: 5 (lower is better)
Translates to: KRPTDRKEADRRMDGGSIQSTRR*SLGSTS
Trigger: TGAAGTACTACCCAAAGACAAACGCCTTGTACTTTG...TATAGAGCCGCCGTCCATCCGTCTGTCTGCCTCCTTCCTGTCCGTTGGTCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
CDS CCA 90 bp CGTGACTACTACTGGAAGCAGACTTCAGGTCCCAATTCAGATCAATaGAACTTAACCTCAGGTCCTTCTGATCTGGTAAAGACCCTCGTC +
Preference number: 5 (lower is better)
Translates to: RDYYWKQTSGPNSDQ*NLTSGPSDLVKTLV
Trigger: GACGAGGGTCTTTACCAGATCAGAAGGACCTGAGGTTAAGTTCCATTGATCTGAATTGGGACCTGAAGTCTGCTTCCAGTAGTAGTCACG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
CDS TCA 90 bp TTCAGGTCCCAATTCAGATCAATGGAACTTAACCTCAGGTCCTTCTaGTCTGGTAAAGACCCTCGTCGAGGAGCTAGAGAAAGTCCTACT +
Preference number: 5 (lower is better)
Translates to: FRSQFRSMELNLRSF*SGKDPRRGARESPT
Trigger: AGTAGGACTTTCTCTAGCTCCTCGACGAGGGTCTTTACCAGATCAGAAGGACCTGAGGTTAAGTTCCATTGATCTGAATTGGGACCTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
CDS TCA 90 bp TGTCTCACACTCCCTGCAACTGTCCTGTTGTCTATACTATCCACGTaGCTACTACTGGAAGCAGACTTCAGGTCCCAATTCAGATCAATG +
Preference number: 5 (lower is better)
Translates to: CLTLPATVLLSILST*LLLEADFRSQFRSM
Trigger: CATTGATCTGAATTGGGACCTGAAGTCTGCTTCCAGTAGTAGTCACGTGGATAGTATAGACAACAGGACAGTTGCAGGGAGTGTGAGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
CDS-3UTR CAA 90 bp CATCATATAACTCAGGCTAAGCCCAAACCTGAAGTCATCCTGCCTCTGTCTGCCTACATCTGCATAGGTTaGCAGTTCATACTCTGGTAC +
Preference number: 5 (lower is better)
Translates to: HHITQAKPKPEVILPLSAYICIG*QFILWY
Trigger: GTACCAGAGTATGAACTGCAAACCTATGCAGATGTA...GGCAGACAGAGGCAGGATGACTTCAGGTTTGGGCTTAGCCTGAGTTATATGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
CDS GCA 90 bp ACTCGGCCCTTCTCCTTGGTGTCTTTAATGTCTAGCACATACATCTaGATAGGTTTGCAGTTCATACTCTGGTACAAGGGTTTACCCACA +
Preference number: 5 (lower is better)
Translates to: TRPFSLVSLMSSTYI*IGLQFILWYKGLPT
Trigger: TGTGGGTAAACCCTTGTACCAGAGTATGAACTGCAAACCTATGCAGATGTATGTGCTAGACATTAAAGACACCAAGGAGAAGGGCCGAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
CDS CCA 90 bp TCCCTGCAACTGTCCTGTTGTCTATACTATCCACGTGACTACTACTaGAAGCAGACTTCAGGTCCCAATTCAGATCAATGGAACTTAACC +
Preference number: 5 (lower is better)
Translates to: SLQLSCCLYYPRDYY*KQTSGPNSDQWNLT
Trigger: GGTTAAGTTCCATTGATCTGAATTGGGACCTGAAGTCTGCTTCCAGTAGTAGTCACGTGGATAGTATAGACAACAGGACAGTTGCAGGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
CDS CCA 90 bp TTAATGTCTAGCACATACATCTGCATAGGTTTGCAGTTCATACTCTaGTACAAGGGTTTACCCACATTAAGGGACTGTGGAGGGTGGTGG +
Preference number: 5 (lower is better)
Translates to: LMSSTYICIGLQFIL*YKGLPTLRDCGGWW
Trigger: CCACCACCCTCCACAGTCCCTTAATGTGGGTAAACCCTTGTACCAGAGTATGAACTGCAAACCTATGCAGATGTATGTGCTAGACATTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
CDS-3UTR CAA 90 bp GCATTGTTTTCCCAAGTCTCAGTCCAAATGTTTGCACACTGGAAAATTCCAAATGTAAGGGATAGGGACTaGGCCTTGTCCAGCCACCAA +
Preference number: 5 (lower is better)
Translates to: ALFSQVSVQMFAHWKIPNVRDRD*ALSSHQ
Trigger: TTGGTGGCTGGACAAGGCCAAGTCCCTATCCCTTAC...ATTTGGAATTTTCCAGTGTGCAAACATTTGGACTGAGACTTGGGAAAACAATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
CDS TCA 72 bp CTCAGGAACCAGGGCTGGAGGAGTGGCACTGATAGGTaGCGGGCGAGAGTTCAAACTGGGGCTGAGGGGCGC +
Preference number: 6 (lower is better)
Translates to: LRNQGWRSGTDR*RARVQTGAEGR
Trigger: GCGCCCCTCAGCCCCAGTTTGAACTCTCGCCCGTCACCTATCAGTGCCACTCCTCCAGCCCTGGTTCCTGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
CDS CCA 72 bp ACACAGGGCGCTTCGTCCATACTCCTCACCGGGGACTaGGAGCGGTACTCTCGGGTCTCAGGAACCAGGGCT +
Preference number: 6 (lower is better)
Translates to: TQGASSILLTGD*ERYSRVSGTRA
Trigger: AGCCCTGGTTCCTGAGACCCGAGAGTACCGCTCCCAGTCCCCGGTGAGGAGTATGGACGAAGCGCCCTGTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
CDS CAA 90 bp GACTGGCCACCTCGAGGGTGTGGACTGGGGCCAGAGATGTTCGGCTaGGACCACGCCCACTGCTCCAGGTCCAGGACCCAGACTTCATTG +
Preference number: 6 (lower is better)
Translates to: DWPPRGCGLGPEMFG*DHAHCSRSRTQTSL
Trigger: CAATGAAGTCTGGGTCCTGGACCTGGAGCAGTGGGCGTGGTCCAAGCCGAACATCTCTGGCCCCAGTCCACACCCTCGAGGTGGCCAGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
CDS TCA 72 bp CTGCCGAGGCTGAGGGGCCTTTGGATGACATCGCTTTaGTGGCTTCCAAACTCCGACGCAGGGCACCGGGAG +
Preference number: 6 (lower is better)
Translates to: LPRLRGLWMTSL*WLPNSDAGHRE
Trigger: CTCCCGGTGCCCTGCGTCGGAGTTTGGAAGCCATCAAAGCGATGTCATCCAAAGGCCCCTCAGCCTCGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
CDS CCA 72 bp GCAGGGCACCGGGAGATACAGCCCCTGCAAGGGCACTaGCCACATGTGGTGGGGTGTGAACACCATTGGTCT +
Preference number: 6 (lower is better)
Translates to: AGHREIQPLQGH*PHVVGCEHHWS
Trigger: AGACCAATGGTGTTCACACCCCACCACATGTGGCCAGTGCCCTTGCAGGGGCTGTATCTCCCGGTGCCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
CDS CAA 72 bp GCTGCCGAGGCTGAGGGGCCTTTGGATGACATCGCTTaGATGGCTTCCAAACTCCGACGCAGGGCACCGGGA +
Preference number: 6 (lower is better)
Translates to: AAEAEGPLDDIA*MASKLRRRAPG
Trigger: TCCCGGTGCCCTGCGTCGGAGTTTGGAAGCCATCAAAGCGATGTCATCCAAAGGCCCCTCAGCCTCGGCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
CDS GCA 72 bp CTGGGGCCAGAGATGTTCGGCTTGGACCACGCCCACTaGTCCAGGTCCAGGACCCAGACTTCATTGCTCATC +
Preference number: 6 (lower is better)
Translates to: LGPEMFGLDHAH*SRSRTQTSLLI
Trigger: GATGAGCAATGAAGTCTGGGTCCTGGACCTGGAGCAGTGGGCGTGGTCCAAGCCGAACATCTCTGGCCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
CDS CAA 90 bp GGACTTAGTGCTGCCGAGGCTGAGGGGCCTTTGGATGACATCGCTTaGATGGCTTCCAAACTCCGACGCAGGGCACCGGGAGATACAGCC +
Preference number: 6 (lower is better)
Translates to: GLSAAEAEGPLDDIA*MASKLRRRAPGDTA
Trigger: GGCTGTATCTCCCGGTGCCCTGCGTCGGAGTTTGGAAGCCATCAAAGCGATGTCATCCAAAGGCCCCTCAGCCTCGGCAGCACTAAGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
CDS TCA 72 bp GCCCCTGCAAGGGCACTGGCCACATGTGGTGGGGTGTaGACACCATTGGTCTGTTCTGGAGGGTGTCTCACA +
Preference number: 6 (lower is better)
Translates to: APARALATCGGV*TPLVCSGGCLT
Trigger: TGTGAGACACCCTCCAGAACAGACCAATGGTGTTCACACCCCACCACATGTGGCCAGTGCCCTTGCAGGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
CDS CAA 90 bp GAAGCACCCCCGACAGCTACTGTCCCTGGAGACAAATTTCCACCATaGAGAATGGGAGAGCCATCTCCTCTGGCTGGGGAGAGGCTCCCT +
Preference number: 6 (lower is better)
Translates to: EAPPTATVPGDKFPP*RMGEPSPLAGERLP
Trigger: AGGGAGCCTCTCCCCAGCCAGAGGAGATGGCTCTCCCATTCTCAATGGTGGAAATTTGTCTCCAGGGACAGTAGCTGTCGGGGGTGCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
CDS CCA 72 bp GGGCACTGGCCACATGTGGTGGGGTGTGAACACCATTaGTCTGTTCTGGAGGGTGTCTCACACTCCCTGCAA +
Preference number: 6 (lower is better)
Translates to: GHWPHVVGCEHH*SVLEGVSHSLQ
Trigger: TTGCAGGGAGTGTGAGACACCCTCCAGAACAGACCAATGGTGTTCACACCCCACCACATGTGGCCAGTGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
CDS CCA 72 bp AGATACAGCCCCTGCAAGGGCACTGGCCACATGTGGTaGGGTGTGAACACCATTGGTCTGTTCTGGAGGGTG +
Preference number: 6 (lower is better)
Translates to: RYSPCKGTGHMW*GVNTIGLFWRV
Trigger: CACCCTCCAGAACAGACCAATGGTGTTCACACCCCACCACATGTGGCCAGTGCCCTTGCAGGGGCTGTATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
CDS CCA 72 bp TACAAGGGTTTACCCACATTAAGGGACTGTGGAGGGTaGTGGCCCAGGCGCCGAGCAATCGGGGGTAAGGAA +
Preference number: 6 (lower is better)
Translates to: YKGLPTLRDCGG*WPRRRAIGGKE
Trigger: TTCCTTACCCCCGATTGCTCGGCGCCTGGGCCACCACCCTCCACAGTCCCTTAATGTGGGTAAACCCTTGTA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
CDS CCA 72 bp ATCTATAACAATCTGAGACTGGCCACCTCGAGGGTGTaGACTGGGGCCAGAGATGTTCGGCTTGGACCACGC +
Preference number: 6 (lower is better)
Translates to: IYNNLRLATSRV*TGARDVRLGPR
Trigger: GCGTGGTCCAAGCCGAACATCTCTGGCCCCAGTCCACACCCTCGAGGTGGCCAGTCTCAGATTGTTATAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
CDS CAA 72 bp GGCCTTGTCCAGCCACCAAATAGCACTAGCAAGTCCTaGTACACGACCAGAGTGGCCCCAGCTTTGGGGGAA +
Preference number: 6 (lower is better)
Translates to: GLVQPPNSTSKS*YTTRVAPALGE
Trigger: TTCCCCCAAAGCTGGGGCCACTCTGGTCGTGTACAAGGACTTGCTAGTGCTATTTGGTGGCTGGACAAGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
CDS CAA 72 bp TGCATGTGCAGCAGCCAGGCATCTTTGAACAGCGCATaGGGACCGCCACACCCGCCAAGGATCAGAAGAGTT +
Preference number: 6 (lower is better)
Translates to: CMCSSQASLNSA*GPPHPPRIRRV
Trigger: AACTCTTCTGATCCTTGGCGGGTGTGGCGGTCCCAATGCGCTGTTCAAAGATGCCTGGCTGCTGCACATGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
CDS GCA 72 bp CTACTTTTAGGTCGTAGCCGTCAGAGGCAGATGGAGTaGTTGGAGACACGACCTGTACGGGGCTGTCTAAGG +
Preference number: 6 (lower is better)
Translates to: LLLGRSRQRQME*LETRPVRGCLR
Trigger: CCTTAGACAGCCCCGTACAGGTCGTGTCTCCAAGCACTCCATCTGCCTCTGACGGCTACGACCTAAAAGTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
CDS CAA 72 bp CCGACAGCTACTGTCCCTGGAGACAAATTTCCACCATaGAGAATGGGAGAGCCATCTCCTCTGGCTGGGGAG +
Preference number: 6 (lower is better)
Translates to: PTATVPGDKFPP*RMGEPSPLAGE
Trigger: CTCCCCAGCCAGAGGAGATGGCTCTCCCATTCTCAATGGTGGAAATTTGTCTCCAGGGACAGTAGCTGTCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
CDS CAA 72 bp CTTTTAGGTCGTAGCCGTCAGAGGCAGATGGAGTGCTaGGAGACACGACCTGTACGGGGCTGTCTAAGGAAG +
Preference number: 6 (lower is better)
Translates to: LLGRSRQRQMEC*ETRPVRGCLRK
Trigger: CTTCCTTAGACAGCCCCGTACAGGTCGTGTCTCCAAGCACTCCATCTGCCTCTGACGGCTACGACCTAAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
CDS CAA 90 bp GGGGTCCTCATCTTGCTCCATTGTCCCTTCCAGTGCAGTTTCTTCTaGGTCCACGGCCATGACACTGTCATCTTCACTGTCCGAGGAGCT +
Preference number: 6 (lower is better)
Translates to: GVLILLHCPFQCSFF*VHGHDTVIFTVRGA
Trigger: AGCTCCTCGGACAGTGAAGATGACAGTGTCATGGCCGTGGACCAAGAAGAAACTGCACTGGAAGGGACAATGGAGCAAGATGAGGACCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
CDS TCA 72 bp CGACAGCTACTGTCCCTGGAGACAAATTTCCACCATTaGGAATGGGAGAGCCATCTCCTCTGGCTGGGGAGA +
Preference number: 6 (lower is better)
Translates to: RQLLSLETNFHH*EWESHLLWLGR
Trigger: TCTCCCCAGCCAGAGGAGATGGCTCTCCCATTCTCAATGGTGGAAATTTGTCTCCAGGGACAGTAGCTGTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
CDS GCA 72 bp TCCTCAACCTCCAACACTGGGTGGGGGTCCTCATCTTaGTCCATTGTCCCTTCCAGTGCAGTTTCTTCTTGG +
Preference number: 6 (lower is better)
Translates to: SSTSNTGWGSSS*SIVPSSAVSSW
Trigger: CCAAGAAGAAACTGCACTGGAAGGGACAATGGAGCAAGATGAGGACCCCCACCCAGTGTTGGAGGTTGAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
CDS CAA 72 bp CCTCTTCCGGCAGCTCAGACATGGACCTATTATGTCTaGTTTCCTCAACCTCCAACACTGGGTGGGGGTCCT +
Preference number: 6 (lower is better)
Translates to: PLPAAQTWTYYV*FPQPPTLGGGP
Trigger: AGGACCCCCACCCAGTGTTGGAGGTTGAGGAAACAAGACATAATAGGTCCATGTCTGAGCTGCCGGAAGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
CDS CAA 90 bp ATGTCTTGTTTCCTCAACCTCCAACACTGGGTGGGGGTCCTCATCTaGCTCCATTGTCCCTTCCAGTGCAGTTTCTTCTTGGTCCACGGC +
Preference number: 6 (lower is better)
Translates to: MSCFLNLQHWVGVLI*LHCPFQCSFFLVHG
Trigger: GCCGTGGACCAAGAAGAAACTGCACTGGAAGGGACAATGGAGCAAGATGAGGACCCCCACCCAGTGTTGGAGGTTGAGGAAACAAGACAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
CDS CAA 90 bp GTCTCAGGAGGCCCGACCACCGAGCTGCTTGTGAACACTTTCCACTaGACTCGGCCCTTCTCCTTGGTGTCTTTAATGTCTAGCACATAC +
Preference number: 6 (lower is better)
Translates to: VSGGPTTELLVNTFH*TRPFSLVSLMSSTY
Trigger: GTATGTGCTAGACATTAAAGACACCAAGGAGAAGGGCCGAGTCAAGTGGAAAGTGTTCACAAGCAGCTCGGTGGTCGGGCCTCCTGAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
CDS CAA 72 bp TTCCTCAACCTCCAACACTGGGTGGGGGTCCTCATCTaGCTCCATTGTCCCTTCCAGTGCAGTTTCTTCTTG +
Preference number: 6 (lower is better)
Translates to: FLNLQHWVGVLI*LHCPFQCSFFL
Trigger: CAAGAAGAAACTGCACTGGAAGGGACAATGGAGCAAGATGAGGACCCCCACCCAGTGTTGGAGGTTGAGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
CDS TCA 72 bp CCAAGGATCAGAAGAGTTGTATCATCTATAACAATCTaGGACTGGCCACCTCGAGGGTGTGGACTGGGGCCA +
Preference number: 6 (lower is better)
Translates to: PRIRRVVSSITI*DWPPRGCGLGP
Trigger: TGGCCCCAGTCCACACCCTCGAGGTGGCCAGTCTCAGATTGTTATAGATGATACAACTCTTCTGATCCTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
CDS CAA 72 bp ATCTCTCTGGCTGGTGTAAGGGATAGGGACTTGGCCTaGTCCAGCCACCAAATAGCACTAGCAAGTCCTTGT +
Preference number: 6 (lower is better)
Translates to: ISLAGVRDRDLA*SSHQIALASPC
Trigger: ACAAGGACTTGCTAGTGCTATTTGGTGGCTGGACAAGGCCAAGTCCCTATCCCTTACACCAGCCAGAGAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
CDS CAA 90 bp CATCAAAGAATCTCTCTGGCTGGTGTAAGGGATAGGGACTTGGCCTaGTCCAGCCACCAAATAGCACTAGCAAGTCCTTGTACACGACCA +
Preference number: 6 (lower is better)
Translates to: HQRISLAGVRDRDLA*SSHQIALASPCTRP
Trigger: TGGTCGTGTACAAGGACTTGCTAGTGCTATTTGGTGGCTGGACAAGGCCAAGTCCCTATCCCTTACACCAGCCAGAGAGATTCTTTGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
CDS GCA 72 bp ACCATTGGTCTGTTCTGGAGGGTGTCTCACACTCCCTaGAACTGTCCTGTTGTCTATACTATCCACGTGACT +
Preference number: 6 (lower is better)
Translates to: TIGLFWRVSHTP*NCPVVYTIHVT
Trigger: AGTCACGTGGATAGTATAGACAACAGGACAGTTGCAGGGAGTGTGAGACACCCTCCAGAACAGACCAATGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
CDS CAA 72 bp ATCTTGCTCCATTGTCCCTTCCAGTGCAGTTTCTTCTaGGTCCACGGCCATGACACTGTCATCTTCACTGTC +
Preference number: 6 (lower is better)
Translates to: ILLHCPFQCSFF*VHGHDTVIFTV
Trigger: GACAGTGAAGATGACAGTGTCATGGCCGTGGACCAAGAAGAAACTGCACTGGAAGGGACAATGGAGCAAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
CDS CAA 72 bp TGGTGGGCCACACCTTTGATAAGTCGATACCACTGTTaGCAGACCAGAGCTGCAGTCTTGTGTTCCTGGTAT +
Preference number: 6 (lower is better)
Translates to: WWATPLISRYHC*QTRAAVLCSWY
Trigger: ATACCAGGAACACAAGACTGCAGCTCTGGTCTGCAAACAGTGGTATCGACTTATCAAAGGTGTGGCCCACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
CDS CAA 72 bp CAAAGAATCTCTCTGGCTGGTGTAAGGGATAGGGACTaGGCCTTGTCCAGCCACCAAATAGCACTAGCAAGT +
Preference number: 6 (lower is better)
Translates to: QRISLAGVRDRD*ALSSHQIALAS
Trigger: ACTTGCTAGTGCTATTTGGTGGCTGGACAAGGCCAAGTCCCTATCCCTTACACCAGCCAGAGAGATTCTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
CDS TCA 72 bp CTCCCTGCAACTGTCCTGTTGTCTATACTATCCACGTaGCTACTACTGGAAGCAGACTTCAGGTCCCAATTC +
Preference number: 6 (lower is better)
Translates to: LPATVLLSILST*LLLEADFRSQF
Trigger: GAATTGGGACCTGAAGTCTGCTTCCAGTAGTAGTCACGTGGATAGTATAGACAACAGGACAGTTGCAGGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
CDS CAA 90 bp GAATTTCATCAAAGAATCTCTCTGGCTGGTGTAAGGGATAGGGACTaGGCCTTGTCCAGCCACCAAATAGCACTAGCAAGTCCTTGTACA +
Preference number: 6 (lower is better)
Translates to: EFHQRISLAGVRDRD*ALSSHQIALASPCT
Trigger: TGTACAAGGACTTGCTAGTGCTATTTGGTGGCTGGACAAGGCCAAGTCCCTATCCCTTACACCAGCCAGAGAGATTCTTTGATGAAATTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
CDS TCA 72 bp CAATTCAGATCAATGGAACTTAACCTCAGGTCCTTCTaGTCTGGTAAAGACCCTCGTCGAGGAGCTAGAGAA +
Preference number: 6 (lower is better)
Translates to: QFRSMELNLRSF*SGKDPRRGARE
Trigger: TTCTCTAGCTCCTCGACGAGGGTCTTTACCAGATCAGAAGGACCTGAGGTTAAGTTCCATTGATCTGAATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
CDS CCA 72 bp CTGTCCTGTTGTCTATACTATCCACGTGACTACTACTaGAAGCAGACTTCAGGTCCCAATTCAGATCAATGG +
Preference number: 6 (lower is better)
Translates to: LSCCLYYPRDYY*KQTSGPNSDQW
Trigger: CCATTGATCTGAATTGGGACCTGAAGTCTGCTTCCAGTAGTAGTCACGTGGATAGTATAGACAACAGGACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
CDS CCA 72 bp TCTCTTTGCGCGCACAAAGTACAAGGCGTTTGTCTTTaGGTAGTACTTCACATTCTGCTTCTTGTCCATGAG +
Preference number: 6 (lower is better)
Translates to: SLCAHKVQGVCL*VVLHILLLVHE
Trigger: CTCATGGACAAGAAGCAGAATGTGAAGTACTACCCAAAGACAAACGCCTTGTACTTTGTGCGCGCAAAGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
CDS TCA 72 bp ATGCAGTTCCACCAGTTTTTAGACGGCGAGTACGTGTaGATTTCATCAAAGAATCTCTCTGGCTGGTGTAAG +
Preference number: 6 (lower is better)
Translates to: MQFHQFLDGEYV*ISSKNLSGWCK
Trigger: CTTACACCAGCCAGAGAGATTCTTTGATGAAATTCACACGTACTCGCCGTCTAAAAACTGGTGGAACTGCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
CDS CCA 72 bp TACTGGAAGCAGACTTCAGGTCCCAATTCAGATCAATaGAACTTAACCTCAGGTCCTTCTGATCTGGTAAAG +
Preference number: 6 (lower is better)
Translates to: YWKQTSGPNSDQ*NLTSGPSDLVK
Trigger: CTTTACCAGATCAGAAGGACCTGAGGTTAAGTTCCATTGATCTGAATTGGGACCTGAAGTCTGCTTCCAGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
CDS CAA 90 bp TTCTCCTTGGTGTCTTTAATGTCTAGCACATACATCTGCATAGGTTaGCAGTTCATACTCTGGTACAAGGGTTTACCCACATTAAGGGAC +
Preference number: 6 (lower is better)
Translates to: FSLVSLMSSTYICIG*QFILWYKGLPTLRD
Trigger: GTCCCTTAATGTGGGTAAACCCTTGTACCAGAGTATGAACTGCAAACCTATGCAGATGTATGTGCTAGACATTAAAGACACCAAGGAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
CDS GCA 72 bp TTCTCCTTGGTGTCTTTAATGTCTAGCACATACATCTaGATAGGTTTGCAGTTCATACTCTGGTACAAGGGT +
Preference number: 6 (lower is better)
Translates to: FSLVSLMSSTYI*IGLQFILWYKG
Trigger: ACCCTTGTACCAGAGTATGAACTGCAAACCTATGCAGATGTATGTGCTAGACATTAAAGACACCAAGGAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10
CDS CAA 72 bp GTGTCTTTAATGTCTAGCACATACATCTGCATAGGTTaGCAGTTCATACTCTGGTACAAGGGTTTACCCACA +
Preference number: 6 (lower is better)
Translates to: VSLMSSTYICIG*QFILWYKGLPT
Trigger: TGTGGGTAAACCCTTGTACCAGAGTATGAACTGCAAACCTATGCAGATGTATGTGCTAGACATTAAAGACAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030757.10