Pregenerated sensors for FBXO42 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028920Ensembl transcript IDs: ENSMUST00000030757.10
Found 248 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR GCA 90 bp | CTGGCCATGAGCCAGACGAGCCGCAGCAGGCTCGTGCCTGGGAGATaGGGGGACAGGGGAATGGGAGACTGCCGCTGGGAAACACGCTGC | + |
Preference number: 1 (lower is better) Translates to: LAMSQTSRSRLVPGR*GDRGMGDCRWETRC Trigger: GCAGCGTGTTTCCCAGCGGCAGTCTCCCATTCCCCTGTCCCCGCATCTCCCAGGCACGAGCCTGCTGCGGCTCGTCTGGCTCATGGCCAG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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3UTR TCA 90 bp | CTCACAGCACCAGCTTTGTCAGGGCACGGTGGGCGTGCACCGACGTaGGCCCTGGTTGGTAGGAGGGGGCAGAGCGAGCACAGTGGAGCC | + |
Preference number: 1 (lower is better) Translates to: LTAPALSGHGGRAPT*ALVGRRGQSEHSGA Trigger: GGCTCCACTGTGCTCGCTCTGCCCCCTCCTACCAACCAGGGCTCACGTCGGTGCACGCCCACCGTGCCCTGACAAAGCTGGTGCTGTGAG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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3UTR CCA 90 bp | CACCAGCTTTGTCAGGGCACGGTGGGCGTGCACCGACGTGAGCCCTaGTTGGTAGGAGGGGGCAGAGCGAGCACAGTGGAGCCAGAGGTT | + |
Preference number: 1 (lower is better) Translates to: HQLCQGTVGVHRREP*LVGGGRASTVEPEV Trigger: AACCTCTGGCTCCACTGTGCTCGCTCTGCCCCCTCCTACCAACCAGGGCTCACGTCGGTGCACGCCCACCGTGCCCTGACAAAGCTGGTG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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3UTR CCA 90 bp | CGAGCCGCAGCAGGCTCGTGCCTGGGAGATGCGGGGACAGGGGAATaGGAGACTGCCGCTGGGAAACACGCTGCTGTCCTTTCAATTTCA | + |
Preference number: 1 (lower is better) Translates to: RAAAGSCLGDAGTGE*ETAAGKHAAVLSIS Trigger: TGAAATTGAAAGGACAGCAGCGTGTTTCCCAGCGGCAGTCTCCCATTCCCCTGTCCCCGCATCTCCCAGGCACGAGCCTGCTGCGGCTCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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3UTR CCA 90 bp | CTGGTTGGTAGGAGGGGGCAGAGCGAGCACAGTGGAGCCAGAGGTTaGCTTTCATTCCCAAGGATGGGGCTGCTGAGAGGCCACCTGCAG | + |
Preference number: 1 (lower is better) Translates to: LVGRRGQSEHSGARG*LSFPRMGLLRGHLQ Trigger: CTGCAGGTGGCCTCTCAGCAGCCCCATCCTTGGGAATGAAAGCCAACCTCTGGCTCCACTGTGCTCGCTCTGCCCCCTCCTACCAACCAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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3UTR TCA 90 bp | GAGCGCCCCCTCGTCCCACTGCGGCGGCTGTCTGTCTTTCCAGGCTaGGCCTCCTGCAATCCTGCCTTCTCTCCTCTTCTTAAGTTAGGG | + |
Preference number: 1 (lower is better) Translates to: ERPLVPLRRLSVFPG*ASCNPAFSPLLKLG Trigger: CCCTAACTTAAGAAGAGGAGAGAAGGCAGGATTGCAGGAGGCTCAGCCTGGAAAGACAGACAGCCGCCGCAGTGGGACGAGGGGGCGCTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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3UTR TCA 90 bp | CTCAGGCTAAGCCCAAACCTGAAGTCATCCTGCCTCTGTCTGCCCTaGGTGCTAGGACACAGGCGTGCACCAGCACACTGTGGTGGGTCC | + |
Preference number: 1 (lower is better) Translates to: LRLSPNLKSSCLCLP*VLGHRRAPAHCGGS Trigger: GGACCCACCACAGTGTGCTGGTGCACGCCTGTGTCCTAGCACTCAGGGCAGACAGAGGCAGGATGACTTCAGGTTTGGGCTTAGCCTGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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3UTR GCA 90 bp | GCTCTCTGCCGCACACTATGTGGCATGCATGACCAGGAAGCTCTGTaGAGGAGCAGAGCAGCGCCCAGAACTCTCACAGGCCAACCAAAT | + |
Preference number: 1 (lower is better) Translates to: ALCRTLCGMHDQEAL*RSRAAPRTLTGQPN Trigger: ATTTGGTTGGCCTGTGAGAGTTCTGGGCGCTGCTCTGCTCCTGCACAGAGCTTCCTGGTCATGCATGCCACATAGTGTGCGGCAGAGAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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3UTR TCA 90 bp | TTTCAGCATGACTCCAGCACGTGGGGAACAGGGTTTCCTGTTGGGTaGCTTCTCTGGATCACAGAGGACAGAAGGGACCAGGCACAGGGC | + |
Preference number: 1 (lower is better) Translates to: FQHDSSTWGTGFPVG*LLWITEDRRDQAQG Trigger: GCCCTGTGCCTGGTCCCTTCTGTCCTCTGTGATCCAGAGAAGTCACCCAACAGGAAACCCTGTTCCCCACGTGCTGGAGTCATGCTGAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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3UTR CCA 90 bp | GAGAAGGCCACAGAAAGCTCACAGGGGCGCTTCTTCAGCTTCCTGTaGGAAGTTACTGCGGTCTCTCCCCTTACTTCCCGGTCTAGTCAG | + |
Preference number: 1 (lower is better) Translates to: EKATESSQGRFFSFL*EVTAVSPLTSRSSQ Trigger: CTGACTAGACCGGGAAGTAAGGGGAGAGACCGCAGTAACTTCCCACAGGAAGCTGAAGAAGCGCCCCTGTGAGCTTTCTGTGGCCTTCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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3UTR CCA 90 bp | CCAGTTTCCTTCTACCTTACTGGTGCTCCCAAAACACGGGGCAGGTaGGGTTGTGGAGCCCTCGTCCCAAACAAGGAAGAAAGGCAGCAA | + |
Preference number: 1 (lower is better) Translates to: PVSFYLTGAPKTRGR*GCGALVPNKEERQQ Trigger: TTGCTGCCTTTCTTCCTTGTTTGGGACGAGGGCTCCACAACCCCACCTGCCCCGTGTTTTGGGAGCACCAGTAAGGTAGAAGGAAACTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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3UTR TCA 90 bp | TGTGGAGCCCTCGTCCCAAACAAGGAAGAAAGGCAGCAACAGGAGTaGGAAACGAATGCTCTCTGCCGCACACTATGTGGCATGCATGAC | + |
Preference number: 1 (lower is better) Translates to: CGALVPNKEERQQQE*ETNALCRTLCGMHD Trigger: GTCATGCATGCCACATAGTGTGCGGCAGAGAGCATTCGTTTCTCACTCCTGTTGCTGCCTTTCTTCCTTGTTTGGGACGAGGGCTCCACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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3UTR TCA 90 bp | AACCAACCAACCCCTCTCCTGGTTGGCTGCACCTCTTCTAGGAAATaGAGTGAAGGCAGCAAGGAAAGCTCTGCTTTGGGGGACACAAGA | + |
Preference number: 1 (lower is better) Translates to: NQPTPLLVGCTSSRK*SEGSKESSALGDTR Trigger: TCTTGTGTCCCCCAAAGCAGAGCTTTCCTTGCTGCCTTCACTTCATTTCCTAGAAGAGGTGCAGCCAACCAGGAGAGGGGTTGGTTGGTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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3UTR CCA 90 bp | CCTCTTCTAGGAAATGAAGTGAAGGCAGCAAGGAAAGCTCTGCTTTaGGGGACACAAGAAAAAGACGACACAGCACTGCACAGCACAGAG | + |
Preference number: 1 (lower is better) Translates to: PLLGNEVKAARKALL*GTQEKDDTALHSTE Trigger: CTCTGTGCTGTGCAGTGCTGTGTCGTCTTTTTCTTGTGTCCCCCAAAGCAGAGCTTTCCTTGCTGCCTTCACTTCATTTCCTAGAAGAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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3UTR TCA 90 bp | CCACAGTTCATGCTTTCAGTTCTCGCCAGAGCTCAGACATTAAAATaGGAAGGCTGGCAGGGCAAGCCCAGCATTGCCTTCAACAAAACT | + |
Preference number: 1 (lower is better) Translates to: PQFMLSVLARAQTLK*EGWQGKPSIAFNKT Trigger: AGTTTTGTTGAAGGCAATGCTGGGCTTGCCCTGCCAGCCTTCTCATTTTAATGTCTGAGCTCTGGCGAGAACTGAAAGCATGAACTGTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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3UTR CCA 90 bp | TCTATGAACAAACAAACCAACCAACCAACCAACCAACCCCTCTCCTaGTTGGCTGCACCTCTTCTAGGAAATGAAGTGAAGGCAGCAAGG | + |
Preference number: 1 (lower is better) Translates to: SMNKQTNQPTNQPLS*LAAPLLGNEVKAAR Trigger: CCTTGCTGCCTTCACTTCATTTCCTAGAAGAGGTGCAGCCAACCAGGAGAGGGGTTGGTTGGTTGGTTGGTTGGTTTGTTTGTTCATAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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3UTR GCA 90 bp | CTGGAGCAAGTTAGGCATGGAATTGGAGTTTTGGTTTATGGGAGTTaGATTGTTTTCCCAAGTCTCAGTCCAAATGTTTGCACACTGGAA | + |
Preference number: 1 (lower is better) Translates to: LEQVRHGIGVLVYGS*IVFPSLSPNVCTLE Trigger: TTCCAGTGTGCAAACATTTGGACTGAGACTTGGGAAAACAATGCAACTCCCATAAACCAAAACTCCAATTCCATGCCTAACTTGCTCCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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3UTR GCA 90 bp | GTTTATGGGAGTTGCATTGTTTTCCCAAGTCTCAGTCCAAATGTTTaGACACTGGAAAATTCCAAATTAAAGGACACAGAAGGGAAGGGG | + |
Preference number: 1 (lower is better) Translates to: VYGSCIVFPSLSPNV*TLENSKLKDTEGKG Trigger: CCCCTTCCCTTCTGTGTCCTTTAATTTGGAATTTTCCAGTGTGCAAACATTTGGACTGAGACTTGGGAAAACAATGCAACTCCCATAAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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3UTR CAA 90 bp | CAGCTTTGTCAGGGCACGGTGGGCGTGCACCGACGTGAGCCCTGGTaGGTAGGAGGGGGCAGAGCGAGCACAGTGGAGCCAGAGGTTGGC | + |
Preference number: 2 (lower is better) Translates to: QLCQGTVGVHRREPW*VGGGRASTVEPEVG Trigger: GCCAACCTCTGGCTCCACTGTGCTCGCTCTGCCCCCTCCTACCAACCAGGGCTCACGTCGGTGCACGCCCACCGTGCCCTGACAAAGCTG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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3UTR-3UTR TCA 90 bp | CGTGCCTGGGAGATGCGGGGACAGGGGAATGGGAGACTGCCGCTGGGAAACACGTGGGTCCTCTGTGGCTaGCAGGAGGCGGGGAAGAGC | + |
Preference number: 2 (lower is better) Translates to: RAWEMRGQGNGRLPLGNTWVLCG*QEAGKS Trigger: GCTCTTCCCCGCCTCCTGTCAGCCACAGAGGACCCA...CGTGTTTCCCAGCGGCAGTCTCCCATTCCCCTGTCCCCGCATCTCCCAGGCACG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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3UTR-3UTR TCA 90 bp | GCCGCAGCAGGCTCGTGCCTGGGAGATGCGGGGACAGGGGAATGGGAGACTGCCGGGTTTCCTGTTGGGTaGCTTCTCTGGATCACAGAG | + |
Preference number: 2 (lower is better) Translates to: AAAGSCLGDAGTGEWETAGFPVG*LLWITE Trigger: CTCTGTGATCCAGAGAAGTCACCCAACAGGAAACCC...GGCAGTCTCCCATTCCCCTGTCCCCGCATCTCCCAGGCACGAGCCTGCTGCGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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3UTR-3UTR TCA 90 bp | TCCCACTGCGGCGGCTGTCTGTCTTTCCAGGCTGAGCCTCCTGCAATCCTGCCTACGCTTGTCGGAAGGTaGGTGCTGGCCATGAGCCAG | + |
Preference number: 2 (lower is better) Translates to: SHCGGCLSFQAEPPAILPTLVGR*VLAMSQ Trigger: CTGGCTCATGGCCAGCACTCACCTTCCGACAAGCGT...AGGCAGGATTGCAGGAGGCTCAGCCTGGAAAGACAGACAGCCGCCGCAGTGGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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3UTR-3UTR CCA 90 bp | AGGAGGGGGCAGAGCGAGCACAGTGGAGCCAGAGGTTGGCTTTCATTCCCAAGGAGGCAGCTGGAGCAGTaGGACACACAGGAAGTAGGC | + |
Preference number: 2 (lower is better) Translates to: RRGQSEHSGARGWLSFPRRQLEQ*DTQEVG Trigger: GCCTACTTCCTGTGTGTCCCACTGCTCCAGCTGCCT...CCTTGGGAATGAAAGCCAACCTCTGGCTCCACTGTGCTCGCTCTGCCCCCTCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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3UTR-3UTR GCA 90 bp | TCCCACTGCGGCGGCTGTCTGTCTTTCCAGGCTGAGCCTCCTGCAATCCTGCCTCCTGTGGGAAGTTACTaGGGTCTCTCCCCTTACTTC | + |
Preference number: 2 (lower is better) Translates to: SHCGGCLSFQAEPPAILPPVGSY*GLSPYF Trigger: GAAGTAAGGGGAGAGACCGCAGTAACTTCCCACAGG...AGGCAGGATTGCAGGAGGCTCAGCCTGGAAAGACAGACAGCCGCCGCAGTGGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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3UTR-3UTR CCA 90 bp | CGTGCCTGGGAGATGCGGGGACAGGGGAATGGGAGACTGCCGCTGGGAAACACGTTCTTCAGCTTCCTGTaGGAAGTTACTGCGGTCTCT | + |
Preference number: 2 (lower is better) Translates to: RAWEMRGQGNGRLPLGNTFFSFL*EVTAVS Trigger: AGAGACCGCAGTAACTTCCCACAGGAAGCTGAAGAA...CGTGTTTCCCAGCGGCAGTCTCCCATTCCCCTGTCCCCGCATCTCCCAGGCACG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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3UTR-3UTR CCA 90 bp | CAAGTCCCAAATGGCTGGTTGCAGTCGAGGCTCATTCTGTTTTCTCTGGAGGGACAGCAGGCTCGTGCCTaGGAGATGCGGGGACAGGGG | + |
Preference number: 2 (lower is better) Translates to: QVPNGWLQSRLILFSLEGQQARA*EMRGQG Trigger: CCCCTGTCCCCGCATCTCCCAGGCACGAGCCTGCTG...TCCCTCCAGAGAAAACAGAATGAGCCTCGACTGCAACCAGCCATTTGGGACTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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3UTR-3UTR GCA 90 bp | GCCTCCTGCAATCCTGCCTTCTCTCCTCTTCTTAAGTTAGGGGAGTTCCGAGACGACCAGGAAGCTCTGTaGAGGAGCAGAGCAGCGCCC | + |
Preference number: 2 (lower is better) Translates to: ASCNPAFSPLLKLGEFRDDQEAL*RSRAAP Trigger: GGGCGCTGCTCTGCTCCTGCACAGAGCTTCCTGGTC...GTCTCGGAACTCCCCTAACTTAAGAAGAGGAGAGAAGGCAGGATTGCAGGAGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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3UTR-3UTR TCA 90 bp | GAAGCTCTGTGCAGGAGCAGAGCAGCGCCCAGAACTCTCACAGGCCAACCAAATGTGTTCTGTGGACACTaGGCTCTGCTAGCGTACTGC | + |
Preference number: 2 (lower is better) Translates to: EALCRSRAAPRTLTGQPNVFCGH*ALLAYC Trigger: GCAGTACGCTAGCAGAGCTCAGTGTCCACAGAACAC...ATTTGGTTGGCCTGTGAGAGTTCTGGGCGCTGCTCTGCTCCTGCACAGAGCTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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3UTR-3UTR CCA 90 bp | GCCGCAGCAGGCTCGTGCCTGGGAGATGCGGGGACAGGGGAATGGGAGACTGCCAACAACTATGGTTTTTaGCAACTTGCAACCAAACAC | + |
Preference number: 2 (lower is better) Translates to: AAAGSCLGDAGTGEWETANNYGF*QLATKH Trigger: GTGTTTGGTTGCAAGTTGCCAAAAACCATAGTTGTT...GGCAGTCTCCCATTCCCCTGTCCCCGCATCTCCCAGGCACGAGCCTGCTGCGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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3UTR-3UTR CCA 90 bp | CATGAGGCTGAGGAGACCACAGTCTCCACTGCTGATTCACTTCCCACAGCAACAAACAGAGCAGGCAGCTaGAGCAGTGGGACACACAGG | + |
Preference number: 2 (lower is better) Translates to: HEAEETTVSTADSLPTATNRAGS*SSGTHR Trigger: CCTGTGTGTCCCACTGCTCCAGCTGCCTGCTCTGTT...TGTTGCTGTGGGAAGTGAATCAGCAGTGGAGACTGTGGTCTCCTCAGCCTCATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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3UTR CAA 90 bp | CATTGTTTCAGCATGACTCCAGCACGTGGGGAACAGGGTTTCCTGTaGGGTGACTTCTCTGGATCACAGAGGACAGAAGGGACCAGGCAC | + |
Preference number: 2 (lower is better) Translates to: HCFSMTPARGEQGFL*GDFSGSQRTEGTRH Trigger: GTGCCTGGTCCCTTCTGTCCTCTGTGATCCAGAGAAGTCACCCAACAGGAAACCCTGTTCCCCACGTGCTGGAGTCATGCTGAAACAATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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3UTR-3UTR TCA 90 bp | CATGAGGCTGAGGAGACCACAGTCTCCACTGCTGATTCACTTCCCACAGCAACAGACAGGAGAGGCCTCTaGGGACCCAGTTCTAAAAGG | + |
Preference number: 2 (lower is better) Translates to: HEAEETTVSTADSLPTATDRRGL*GPSSKR Trigger: CCTTTTAGAACTGGGTCCTCAGAGGCCTCTCCTGTC...TGTTGCTGTGGGAAGTGAATCAGCAGTGGAGACTGTGGTCTCCTCAGCCTCATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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3UTR-3UTR TCA 90 bp | CGGGGACAGGGGAATGGGAGACTGCCGCTGGGAAACACGCTGCTGTCCTTTCAAACCTCTTCTAGGAAATaGAGTGAAGGCAGCAAGGAA | + |
Preference number: 2 (lower is better) Translates to: RGQGNGRLPLGNTLLSFQTSSRK*SEGSKE Trigger: TTCCTTGCTGCCTTCACTTCATTTCCTAGAAGAGGT...TTGAAAGGACAGCAGCGTGTTTCCCAGCGGCAGTCTCCCATTCCCCTGTCCCCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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3UTR-3UTR GCA 90 bp | GAAGCTCTGTGCAGGAGCAGAGCAGCGCCCAGAACTCTCACAGGCCAACCAAATTCCCAAATGGCTGGTTaGAGTCGAGGCTCATTCTGT | + |
Preference number: 2 (lower is better) Translates to: EALCRSRAAPRTLTGQPNSQMAG*SRGSFC Trigger: ACAGAATGAGCCTCGACTGCAACCAGCCATTTGGGA...ATTTGGTTGGCCTGTGAGAGTTCTGGGCGCTGCTCTGCTCCTGCACAGAGCTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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3UTR-3UTR CCA 90 bp | CGTGCCTGGGAGATGCGGGGACAGGGGAATGGGAGACTGCCGCTGGGAAACACGATGGAATTGGAGTTTTaGTTTATGGGAGTTGCATTG | + |
Preference number: 2 (lower is better) Translates to: RAWEMRGQGNGRLPLGNTMELEF*FMGVAL Trigger: CAATGCAACTCCCATAAACCAAAACTCCAATTCCAT...CGTGTTTCCCAGCGGCAGTCTCCCATTCCCCTGTCCCCGCATCTCCCAGGCACG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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3UTR-3UTR CCA 90 bp | CGGGGACAGGGGAATGGGAGACTGCCGCTGGGAAACACGCTGCTGTCCTTTCAAGAATTCTGTGGACACTaGAGCTTTGTCAGAGAGGAA | + |
Preference number: 2 (lower is better) Translates to: RGQGNGRLPLGNTLLSFQEFCGH*SFVREE Trigger: TTCCTCTCTGACAAAGCTCCAGTGTCCACAGAATTC...TTGAAAGGACAGCAGCGTGTTTCCCAGCGGCAGTCTCCCATTCCCCTGTCCCCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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3UTR-3UTR CCA 90 bp | AGGGCAAGCCCAGCATTGCCTTCAACAAAACTCCAGTTTCCTTCTACCTTACTGACCAGCACACTGTGGTaGGTCCCGACGGGCCATGAG | + |
Preference number: 2 (lower is better) Translates to: RASPALPSTKLQFPSTLLTSTLW*VPTGHE Trigger: CTCATGGCCCGTCGGGACCCACCACAGTGTGCTGGT...CAGTAAGGTAGAAGGAAACTGGAGTTTTGTTGAAGGCAATGCTGGGCTTGCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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3UTR-3UTR CCA 90 bp | CATGAGGCTGAGGAGACCACAGTCTCCACTGCTGATTCACTTCCCACAGCAACAAACCAACCCCTCTCCTaGTTGGCTGCACCTCTTCTA | + |
Preference number: 2 (lower is better) Translates to: HEAEETTVSTADSLPTATNQPLS*LAAPLL Trigger: TAGAAGAGGTGCAGCCAACCAGGAGAGGGGTTGGTT...TGTTGCTGTGGGAAGTGAATCAGCAGTGGAGACTGTGGTCTCCTCAGCCTCATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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3UTR-3UTR CCA 90 bp | AGGAGGGGGCAGAGCGAGCACAGTGGAGCCAGAGGTTGGCTTTCATTCCCAAGGTGTTGCCTGTCTACTTaGGAGAAGTCGAAGAATCAA | + |
Preference number: 2 (lower is better) Translates to: RRGQSEHSGARGWLSFPRCCLST*EKSKNQ Trigger: TTGATTCTTCGACTTCTCCCAAGTAGACAGGCAACA...CCTTGGGAATGAAAGCCAACCTCTGGCTCCACTGTGCTCGCTCTGCCCCCTCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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3UTR CAA 90 bp | GGCTTCCTTACCCTGGACTCCTTCAGATCCTCCCCGCTGTCATTTTaGCTGGTGACCACAGATAATGCAAATAGAGTACGTCACCATGCC | + |
Preference number: 2 (lower is better) Translates to: GFLTLDSFRSSPLSF*LVTTDNANRVRHHA Trigger: GGCATGGTGACGTACTCTATTTGCATTATCTGTGGTCACCAGCAAAAATGACAGCGGGGAGGATCTGAAGGAGTCCAGGGTAAGGAAGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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3UTR-3UTR GCA 90 bp | GAAGCTCTGTGCAGGAGCAGAGCAGCGCCCAGAACTCTCACAGGCCAACCAAATTGGTTTTTGGCAACTTaGAACCAAACACGATTGTCG | + |
Preference number: 2 (lower is better) Translates to: EALCRSRAAPRTLTGQPNWFLAT*NQTRLS Trigger: CGACAATCGTGTTTGGTTGCAAGTTGCCAAAAACCA...ATTTGGTTGGCCTGTGAGAGTTCTGGGCGCTGCTCTGCTCCTGCACAGAGCTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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3UTR CAA 90 bp | AGAGGGTTCAGCAATGCTAGGCTGCTTATCTGCTGGCCTTATCTCTaGAGTCAAGATCCCACAGGATCAGTCTTGGCCAAAGGACTGGTA | + |
Preference number: 2 (lower is better) Translates to: RGFSNARLLICWPYL*SQDPTGSVLAKGLV Trigger: TACCAGTCCTTTGGCCAAGACTGATCCTGTGGGATCTTGACTCAAGAGATAAGGCCAGCAGATAAGCAGCCTAGCATTGCTGAACCCTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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3UTR-3UTR TCA 90 bp | GCCTCCTGCAATCCTGCCTTCTCTCCTCTTCTTAAGTTAGGGGAGTTCCGAGACAGGTGTCCGAATGCTTaGTGTTTCAGTAGAGACCAA | + |
Preference number: 2 (lower is better) Translates to: ASCNPAFSPLLKLGEFRDRCPNA*CFSRDQ Trigger: TTGGTCTCTACTGAAACATCAAGCATTCGGACACCT...GTCTCGGAACTCCCCTAACTTAAGAAGAGGAGAGAAGGCAGGATTGCAGGAGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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3UTR CAA 90 bp | ATGAACAAACAAACCAACCAACCAACCAACCAACCCCTCTCCTGGTaGGCTGCACCTCTTCTAGGAAATGAAGTGAAGGCAGCAAGGAAA | + |
Preference number: 2 (lower is better) Translates to: MNKQTNQPTNQPLSW*AAPLLGNEVKAARK Trigger: TTTCCTTGCTGCCTTCACTTCATTTCCTAGAAGAGGTGCAGCCAACCAGGAGAGGGGTTGGTTGGTTGGTTGGTTGGTTTGTTTGTTCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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3UTR CAA 90 bp | GATTTCTGTTGCCTGTCTACTTGGGAGAAGTCGAAGAATCAACAGTaGACAGCCAGCTTAGGAAGGCCACAGGGGAAAGAGAAAGACTAC | + |
Preference number: 2 (lower is better) Translates to: DFCCLSTWEKSKNQQ*TASLGRPQGKEKDY Trigger: GTAGTCTTTCTCTTTCCCCTGTGGCCTTCCTAAGCTGGCTGTCAACTGTTGATTCTTCGACTTCTCCCAAGTAGACAGGCAACAGAAATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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3UTR CAA 90 bp | GGATTTAATCCCAGCCTGGAGCAAGTTAGGCATGGAATTGGAGTTTaGGTTTATGGGAGTTGCATTGTTTTCCCAAGTCTCAGTCCAAAT | + |
Preference number: 2 (lower is better) Translates to: GFNPSLEQVRHGIGV*VYGSCIVFPSLSPN Trigger: ATTTGGACTGAGACTTGGGAAAACAATGCAACTCCCATAAACCAAAACTCCAATTCCATGCCTAACTTGCTCCAGGCTGGGATTAAATCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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3UTR-3UTR CCA 90 bp | TGCCGCTGGGAAACACGCTGCTGTCCTTTCAATTTCAGTTTTAAAGGTAAAATAAGGAAAGCTCTGCTTTaGGGGACACAAGAAAAAGAC | + |
Preference number: 2 (lower is better) Translates to: CRWETRCCPFNFSFKGKIRKALL*GTQEKD Trigger: GTCTTTTTCTTGTGTCCCCCAAAGCAGAGCTTTCCT...TATTTTACCTTTAAAACTGAAATTGAAAGGACAGCAGCGTGTTTCCCAGCGGCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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3UTR CCA 72 bp | GGCCATGAGCCAGACGAGCCGCAGCAGGCTCGTGCCTaGGAGATGCGGGGACAGGGGAATGGGAGACTGCCG | + |
Preference number: 3 (lower is better) Translates to: GHEPDEPQQARA*EMRGQGNGRLP Trigger: CGGCAGTCTCCCATTCCCCTGTCCCCGCATCTCCCAGGCACGAGCCTGCTGCGGCTCGTCTGGCTCATGGCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
||
3UTR TCA 72 bp | CCAGCTTTGTCAGGGCACGGTGGGCGTGCACCGACGTaGGCCCTGGTTGGTAGGAGGGGGCAGAGCGAGCAC | + |
Preference number: 3 (lower is better) Translates to: PALSGHGGRAPT*ALVGRRGQSEH Trigger: GTGCTCGCTCTGCCCCCTCCTACCAACCAGGGCTCACGTCGGTGCACGCCCACCGTGCCCTGACAAAGCTGG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
||
3UTR GCA 72 bp | AGCCAGACGAGCCGCAGCAGGCTCGTGCCTGGGAGATaGGGGGACAGGGGAATGGGAGACTGCCGCTGGGAA | + |
Preference number: 3 (lower is better) Translates to: SQTSRSRLVPGR*GDRGMGDCRWE Trigger: TTCCCAGCGGCAGTCTCCCATTCCCCTGTCCCCGCATCTCCCAGGCACGAGCCTGCTGCGGCTCGTCTGGCT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
||
3UTR CCA 72 bp | TGTCAGGGCACGGTGGGCGTGCACCGACGTGAGCCCTaGTTGGTAGGAGGGGGCAGAGCGAGCACAGTGGAG | + |
Preference number: 3 (lower is better) Translates to: CQGTVGVHRREP*LVGGGRASTVE Trigger: CTCCACTGTGCTCGCTCTGCCCCCTCCTACCAACCAGGGCTCACGTCGGTGCACGCCCACCGTGCCCTGACA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
||
3UTR CCA 72 bp | AGTGCTAGGACACAGGCGTGCACCAGCACACTGTGGTaGGTCCCGACGGGCCATGAGGATGCCGGGAGGCTC | + |
Preference number: 3 (lower is better) Translates to: SARTQACTSTLW*VPTGHEDAGRL Trigger: GAGCCTCCCGGCATCCTCATGGCCCGTCGGGACCCACCACAGTGTGCTGGTGCACGCCTGTGTCCTAGCACT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
||
3UTR GCA 72 bp | CTGCCTCTGTCTGCCCTGAGTGCTAGGACACAGGCGTaGACCAGCACACTGTGGTGGGTCCCGACGGGCCAT | + |
Preference number: 3 (lower is better) Translates to: LPLSALSARTQA*TSTLWWVPTGH Trigger: ATGGCCCGTCGGGACCCACCACAGTGTGCTGGTGCACGCCTGTGTCCTAGCACTCAGGGCAGACAGAGGCAG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
||
3UTR CCA 72 bp | GCAGGCTCGTGCCTGGGAGATGCGGGGACAGGGGAATaGGAGACTGCCGCTGGGAAACACGCTGCTGTCCTT | + |
Preference number: 3 (lower is better) Translates to: AGSCLGDAGTGE*ETAAGKHAAVL Trigger: AAGGACAGCAGCGTGTTTCCCAGCGGCAGTCTCCCATTCCCCTGTCCCCGCATCTCCCAGGCACGAGCCTGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
||
3UTR-3UTR CAA 90 bp | GCCGCAGCAGGCTCGTGCCTGGGAGATGCGGGGACAGGGGAATGGGAGACTGCCGTGGACACTGGAGCTTaGTCAGAGAGGAAGAAGTTC | + |
Preference number: 3 (lower is better) Translates to: AAAGSCLGDAGTGEWETAVDTGA*SERKKF Trigger: GAACTTCTTCCTCTCTGACAAAGCTCCAGTGTCCAC...GGCAGTCTCCCATTCCCCTGTCCCCGCATCTCCCAGGCACGAGCCTGCTGCGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
||
3UTR CCA 72 bp | AGGAGGGGGCAGAGCGAGCACAGTGGAGCCAGAGGTTaGCTTTCATTCCCAAGGATGGGGCTGCTGAGAGGC | + |
Preference number: 3 (lower is better) Translates to: RRGQSEHSGARG*LSFPRMGLLRG Trigger: GCCTCTCAGCAGCCCCATCCTTGGGAATGAAAGCCAACCTCTGGCTCCACTGTGCTCGCTCTGCCCCCTCCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
||
3UTR-3UTR CAA 90 bp | GCCGCAGCAGGCTCGTGCCTGGGAGATGCGGGGACAGGGGAATGGGAGACTGCCAAGGAAAGCTCTGCTTaGGGGGACACAAGAAAAAGA | + |
Preference number: 3 (lower is better) Translates to: AAAGSCLGDAGTGEWETAKESSA*GDTRKR Trigger: TCTTTTTCTTGTGTCCCCCAAAGCAGAGCTTTCCTT...GGCAGTCTCCCATTCCCCTGTCCCCGCATCTCCCAGGCACGAGCCTGCTGCGGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
||
3UTR GCA 72 bp | GTGCCTGGGAGATGCGGGGACAGGGGAATGGGAGACTaGCGCTGGGAAACACGCTGCTGTCCTTTCAATTTC | + |
Preference number: 3 (lower is better) Translates to: VPGRCGDRGMGD*RWETRCCPFNF Trigger: GAAATTGAAAGGACAGCAGCGTGTTTCCCAGCGGCAGTCTCCCATTCCCCTGTCCCCGCATCTCCCAGGCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
||
3UTR GCA 72 bp | CGCACACTATGTGGCATGCATGACCAGGAAGCTCTGTaGAGGAGCAGAGCAGCGCCCAGAACTCTCACAGGC | + |
Preference number: 3 (lower is better) Translates to: RTLCGMHDQEAL*RSRAAPRTLTG Trigger: GCCTGTGAGAGTTCTGGGCGCTGCTCTGCTCCTGCACAGAGCTTCCTGGTCATGCATGCCACATAGTGTGCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
||
3UTR CCA 72 bp | ACAGGGCGCTTCTACAGAGCCATCATGGGTCCTCTGTaGCTGACAGGAGGCGGGGAAGAGCTGTCTTCTGTG | + |
Preference number: 3 (lower is better) Translates to: TGRFYRAIMGPL*LTGGGEELSSV Trigger: CACAGAAGACAGCTCTTCCCCGCCTCCTGTCAGCCACAGAGGACCCATGATGGCTCTGTAGAAGCGCCCTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
||
3UTR-3UTR CAA 90 bp | CGTGCCTGGGAGATGCGGGGACAGGGGAATGGGAGACTGCCGCTGGGAAACACGATGGTTTTTGGCAACTaGCAACCAAACACGATTGTC | + |
Preference number: 3 (lower is better) Translates to: RAWEMRGQGNGRLPLGNTMVFGN*QPNTIV Trigger: GACAATCGTGTTTGGTTGCAAGTTGCCAAAAACCAT...CGTGTTTCCCAGCGGCAGTCTCCCATTCCCCTGTCCCCGCATCTCCCAGGCACG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
||
3UTR CCA 72 bp | ACAGAAAGCTCACAGGGGCGCTTCTTCAGCTTCCTGTaGGAAGTTACTGCGGTCTCTCCCCTTACTTCCCGG | + |
Preference number: 3 (lower is better) Translates to: TESSQGRFFSFL*EVTAVSPLTSR Trigger: CCGGGAAGTAAGGGGAGAGACCGCAGTAACTTCCCACAGGAAGCTGAAGAAGCGCCCCTGTGAGCTTTCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
||
3UTR-3UTR CAA 90 bp | CGTGCCTGGGAGATGCGGGGACAGGGGAATGGGAGACTGCCGCTGGGAAACACGATGTCCTCTGTTTTGTaGAGACAGAGTCTCATCATA | + |
Preference number: 3 (lower is better) Translates to: RAWEMRGQGNGRLPLGNTMSSVL*RQSLII Trigger: TATGATGAGACTCTGTCTCAACAAAACAGAGGACAT...CGTGTTTCCCAGCGGCAGTCTCCCATTCCCCTGTCCCCGCATCTCCCAGGCACG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
||
3UTR CCA 72 bp | GGGAGATGCGGGGACAGGGGAATGGGAGACTGCCGCTaGGAAACACGCTGCTGTCCTTTCAATTTCAGTTTT | + |
Preference number: 3 (lower is better) Translates to: GRCGDRGMGDCR*ETRCCPFNFSF Trigger: AAAACTGAAATTGAAAGGACAGCAGCGTGTTTCCCAGCGGCAGTCTCCCATTCCCCTGTCCCCGCATCTCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
||
3UTR CCA 72 bp | TTCTACCTTACTGGTGCTCCCAAAACACGGGGCAGGTaGGGTTGTGGAGCCCTCGTCCCAAACAAGGAAGAA | + |
Preference number: 3 (lower is better) Translates to: FYLTGAPKTRGR*GCGALVPNKEE Trigger: TTCTTCCTTGTTTGGGACGAGGGCTCCACAACCCCACCTGCCCCGTGTTTTGGGAGCACCAGTAAGGTAGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
||
3UTR TCA 72 bp | CGGATGGACGGCGGCTCTATAAACATTGTTTCAGCATaGCTCCAGCACGTGGGGAACAGGGTTTCCTGTTGG | + |
Preference number: 3 (lower is better) Translates to: RMDGGSINIVSA*LQHVGNRVSCW Trigger: CCAACAGGAAACCCTGTTCCCCACGTGCTGGAGTCATGCTGAAACAATGTTTATAGAGCCGCCGTCCATCCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
||
3UTR GCA 72 bp | CAGCACTCAGGGACCATCAAGTCCCAAATGGCTGGTTaGAGTCGAGGCTCATTCTGTTTTCTCTGGAGGGAC | + |
Preference number: 3 (lower is better) Translates to: QHSGTIKSQMAG*SRGSFCFLWRD Trigger: GTCCCTCCAGAGAAAACAGAATGAGCCTCGACTGCAACCAGCCATTTGGGACTTGATGGTCCCTGAGTGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
||
3UTR CCA 72 bp | ATGGCTGGTTGCAGTCGAGGCTCATTCTGTTTTCTCTaGAGGGACTGCAGAGATCTCAGGCAGAGGAACCCA | + |
Preference number: 3 (lower is better) Translates to: MAGCSRGSFCFL*RDCRDLRQRNP Trigger: TGGGTTCCTCTGCCTGAGATCTCTGCAGTCCCTCCAGAGAAAACAGAATGAGCCTCGACTGCAACCAGCCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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3UTR-3UTR CAA 90 bp | CGGGGACAGGGGAATGGGAGACTGCCGCTGGGAAACACGCTGCTGTCCTTTCAATTTATGGGAGTTGCATaGTTTTCCCAAGTCTCAGTC | + |
Preference number: 3 (lower is better) Translates to: RGQGNGRLPLGNTLLSFQFMGVA*FSQVSV Trigger: GACTGAGACTTGGGAAAACAATGCAACTCCCATAAA...TTGAAAGGACAGCAGCGTGTTTCCCAGCGGCAGTCTCCCATTCCCCTGTCCCCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
||
3UTR-3UTR CAA 90 bp | CCCCTCTCCTGGTTGGCTGCACCTCTTCTAGGAAATGAAGTGAAGGCAGCAAGGCAGATGTCCTCTGTTTaGTTGAGACAGAGTCTCATC | + |
Preference number: 3 (lower is better) Translates to: PLSWLAAPLLGNEVKAARQMSSV*LRQSLI Trigger: GATGAGACTCTGTCTCAACAAAACAGAGGACATCTG...CCTTGCTGCCTTCACTTCATTTCCTAGAAGAGGTGCAGCCAACCAGGAGAGGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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3UTR-3UTR CAA 90 bp | AGGGCAAGCCCAGCATTGCCTTCAACAAAACTCCAGTTTCCTTCTACCTTACTGAACAGGAGGGCTCTCTaGCCAAGACCAGCAGAGCAA | + |
Preference number: 3 (lower is better) Translates to: RASPALPSTKLQFPSTLLNRRAL*PRPAEQ Trigger: TTGCTCTGCTGGTCTTGGCAAGAGAGCCCTCCTGTT...CAGTAAGGTAGAAGGAAACTGGAGTTTTGTTGAAGGCAATGCTGGGCTTGCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
||
3UTR-3UTR CAA 90 bp | GCCTCCTGCAATCCTGCCTTCTCTCCTCTTCTTAAGTTAGGGGAGTTCCGAGACACCCCTCCTCTAGAGTaGGCCTTTTCCAAGTTTCAA | + |
Preference number: 3 (lower is better) Translates to: ASCNPAFSPLLKLGEFRDTPPLE*AFSKFQ Trigger: TTGAAACTTGGAAAAGGCCAACTCTAGAGGAGGGGT...GTCTCGGAACTCCCCTAACTTAAGAAGAGGAGAGAAGGCAGGATTGCAGGAGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
||
3UTR TCA 72 bp | ATGCTTTCAGTTCTCGCCAGAGCTCAGACATTAAAATaGGAAGGCTGGCAGGGCAAGCCCAGCATTGCCTTC | + |
Preference number: 3 (lower is better) Translates to: MLSVLARAQTLK*EGWQGKPSIAF Trigger: GAAGGCAATGCTGGGCTTGCCCTGCCAGCCTTCTCATTTTAATGTCTGAGCTCTGGCGAGAACTGAAAGCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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3UTR CCA 72 bp | CCGGGAGGCTCTAACAGCTCTGAATTCTGTGGACACTaGAGCTTTGTCAGAGAGGAAGAAGTTCGGAAGTTC | + |
Preference number: 3 (lower is better) Translates to: PGGSNSSEFCGH*SFVREEEVRKF Trigger: GAACTTCCGAACTTCTTCCTCTCTGACAAAGCTCCAGTGTCCACAGAATTCAGAGCTGTTAGAGCCTCCCGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
||
3UTR CCA 72 bp | TCTACAGCACTCAGGGACCATCAAGTCCCAAATGGCTaGTTGCAGTCGAGGCTCATTCTGTTTTCTCTGGAG | + |
Preference number: 3 (lower is better) Translates to: STALRDHQVPNG*LQSRLILFSLE Trigger: CTCCAGAGAAAACAGAATGAGCCTCGACTGCAACCAGCCATTTGGGACTTGATGGTCCCTGAGTGCTGTAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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3UTR TCA 72 bp | GCAATGCTAGGCTGCTTATCTGCTGGCCTTATCTCTTaGGTCAAGATCCCACAGGATCAGTCTTGGCCAAAG | + |
Preference number: 3 (lower is better) Translates to: AMLGCLSAGLIS*VKIPQDQSWPK Trigger: CTTTGGCCAAGACTGATCCTGTGGGATCTTGACTCAAGAGATAAGGCCAGCAGATAAGCAGCCTAGCATTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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3UTR CCA 72 bp | GGAAATGAAGTGAAGGCAGCAAGGAAAGCTCTGCTTTaGGGGACACAAGAAAAAGACGACACAGCACTGCAC | + |
Preference number: 3 (lower is better) Translates to: GNEVKAARKALL*GTQEKDDTALH Trigger: GTGCAGTGCTGTGTCGTCTTTTTCTTGTGTCCCCCAAAGCAGAGCTTTCCTTGCTGCCTTCACTTCATTTCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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3UTR CCA 72 bp | AAACAAACCAACCAACCAACCAACCAACCCCTCTCCTaGTTGGCTGCACCTCTTCTAGGAAATGAAGTGAAG | + |
Preference number: 3 (lower is better) Translates to: KQTNQPTNQPLS*LAAPLLGNEVK Trigger: CTTCACTTCATTTCCTAGAAGAGGTGCAGCCAACCAGGAGAGGGGTTGGTTGGTTGGTTGGTTGGTTTGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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3UTR CCA 72 bp | AACATCTACAGCACTCAGGGACCATCAAGTCCCAAATaGCTGGTTGCAGTCGAGGCTCATTCTGTTTTCTCT | + |
Preference number: 3 (lower is better) Translates to: NIYSTQGPSSPK*LVAVEAHSVFS Trigger: AGAGAAAACAGAATGAGCCTCGACTGCAACCAGCCATTTGGGACTTGATGGTCCCTGAGTGCTGTAGATGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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3UTR-3UTR CAA 90 bp | CAAGTCCCAAATGGCTGGTTGCAGTCGAGGCTCATTCTGTTTTCTCTGGAGGGAAGGTTAAGATTTCTGTaGCCTGTCTACTTGGGAGAA | + |
Preference number: 3 (lower is better) Translates to: QVPNGWLQSRLILFSLEGRLRFL*PVYLGE Trigger: TTCTCCCAAGTAGACAGGCAACAGAAATCTTAACCT...TCCCTCCAGAGAAAACAGAATGAGCCTCGACTGCAACCAGCCATTTGGGACTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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3UTR-3UTR CAA 90 bp | CAAGTCCCAAATGGCTGGTTGCAGTCGAGGCTCATTCTGTTTTCTCTGGAGGGACATGGAATTGGAGTTTaGGTTTATGGGAGTTGCATT | + |
Preference number: 3 (lower is better) Translates to: QVPNGWLQSRLILFSLEGHGIGV*VYGSCI Trigger: AATGCAACTCCCATAAACCAAAACTCCAATTCCATG...TCCCTCCAGAGAAAACAGAATGAGCCTCGACTGCAACCAGCCATTTGGGACTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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3UTR GCA 72 bp | GTTAGGCATGGAATTGGAGTTTTGGTTTATGGGAGTTaGATTGTTTTCCCAAGTCTCAGTCCAAATGTTTGC | + |
Preference number: 3 (lower is better) Translates to: VRHGIGVLVYGS*IVFPSLSPNVC Trigger: GCAAACATTTGGACTGAGACTTGGGAAAACAATGCAACTCCCATAAACCAAAACTCCAATTCCATGCCTAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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3UTR GCA 72 bp | AGTTGCATTGTTTTCCCAAGTCTCAGTCCAAATGTTTaGACACTGGAAAATTCCAAATTAAAGGACACAGAA | + |
Preference number: 3 (lower is better) Translates to: SCIVFPSLSPNV*TLENSKLKDTE Trigger: TTCTGTGTCCTTTAATTTGGAATTTTCCAGTGTGCAAACATTTGGACTGAGACTTGGGAAAACAATGCAACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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3UTR CAA 72 bp | CAGGGCACGGTGGGCGTGCACCGACGTGAGCCCTGGTaGGTAGGAGGGGGCAGAGCGAGCACAGTGGAGCCA | + |
Preference number: 4 (lower is better) Translates to: QGTVGVHRREPW*VGGGRASTVEP Trigger: TGGCTCCACTGTGCTCGCTCTGCCCCCTCCTACCAACCAGGGCTCACGTCGGTGCACGCCCACCGTGCCCTG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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CDS-3UTR CCA 90 bp | GCCGCAGCAGGCTCGTGCCTGGGAGATGCGGGGACAGGGGAATGGGAGACTGCCCTCAACCTCCAACACTaGGTGGGGGTCCTCATCTTG | + |
Preference number: 4 (lower is better) Translates to: AAAGSCLGDAGTGEWETALNLQH*VGVLIL Trigger: CAAGATGAGGACCCCCACCCAGTGTTGGAGGTTGAG...GGCAGTCTCCCATTCCCCTGTCCCCGCATCTCCCAGGCACGAGCCTGCTGCGGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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CDS-3UTR CCA 90 bp | TCCCACTGCGGCGGCTGTCTGTCTTTCCAGGCTGAGCCTCCTGCAATCCTGCCTCTCCTCACCGGGGACTaGGAGCGGTACTCTCGGGTC | + |
Preference number: 4 (lower is better) Translates to: SHCGGCLSFQAEPPAILPLLTGD*ERYSRV Trigger: GACCCGAGAGTACCGCTCCCAGTCCCCGGTGAGGAG...AGGCAGGATTGCAGGAGGCTCAGCCTGGAAAGACAGACAGCCGCCGCAGTGGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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CDS-3UTR GCA 90 bp | GGGACCAGGCACAGGGCGCTTCTACAGAGCCATCATGGGTCCTCTGTGGCTGACTCTACCTTGAGTGGCTaGCAGGCCCAGGGACCTGGG | + |
Preference number: 4 (lower is better) Translates to: GTRHRALLQSHHGSSVADSTLSG*QAQGPG Trigger: CCCAGGTCCCTGGGCCTGGCAGCCACTCAAGGTAGA...GTCAGCCACAGAGGACCCATGATGGCTCTGTAGAAGCGCCCTGTGCCTGGTCCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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CDS-3UTR CCA 90 bp | CGTGCCTGGGAGATGCGGGGACAGGGGAATGGGAGACTGCCGCTGGGAAACACGGGCAGATGGAGTGCTTaGAGACACGACCTGTACGGG | + |
Preference number: 4 (lower is better) Translates to: RAWEMRGQGNGRLPLGNTGRWSA*RHDLYG Trigger: CCCGTACAGGTCGTGTCTCCAAGCACTCCATCTGCC...CGTGTTTCCCAGCGGCAGTCTCCCATTCCCCTGTCCCCGCATCTCCCAGGCACG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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CDS-3UTR CCA 90 bp | CGGGGACAGGGGAATGGGAGACTGCCGCTGGGAAACACGCTGCTGTCCTTTCAAGACTGTGGAGGGTGGTaGCCCAGGCGCCGAGCAATC | + |
Preference number: 4 (lower is better) Translates to: RGQGNGRLPLGNTLLSFQDCGGW*PRRRAI Trigger: GATTGCTCGGCGCCTGGGCCACCACCCTCCACAGTC...TTGAAAGGACAGCAGCGTGTTTCCCAGCGGCAGTCTCCCATTCCCCTGTCCCCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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CDS-3UTR GCA 90 bp | CGTGCCTGGGAGATGCGGGGACAGGGGAATGGGAGACTGCCGCTGGGAAACACGATGGGAGGAGGCCCATaGGTGGTGACAATGCAGTTC | + |
Preference number: 4 (lower is better) Translates to: RAWEMRGQGNGRLPLGNTMGGGP*VVTMQF Trigger: GAACTGCATTGTCACCACGCATGGGCCTCCTCCCAT...CGTGTTTCCCAGCGGCAGTCTCCCATTCCCCTGTCCCCGCATCTCCCAGGCACG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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CDS-3UTR CCA 90 bp | TCCCACTGCGGCGGCTGTCTGTCTTTCCAGGCTGAGCCTCCTGCAATCCTGCCTGCCACCTCGAGGGTGTaGACTGGGGCCAGAGATGTT | + |
Preference number: 4 (lower is better) Translates to: SHCGGCLSFQAEPPAILPATSRV*TGARDV Trigger: AACATCTCTGGCCCCAGTCCACACCCTCGAGGTGGC...AGGCAGGATTGCAGGAGGCTCAGCCTGGAAAGACAGACAGCCGCCGCAGTGGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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CDS-3UTR CCA 90 bp | CGGGGACAGGGGAATGGGAGACTGCCGCTGGGAAACACGCTGCTGTCCTTTCAACTCCCGCTTGGCGCCTaGCTGAAGACCACCACACAC | + |
Preference number: 4 (lower is better) Translates to: RGQGNGRLPLGNTLLSFQLPLGA*LKTTTH Trigger: GTGTGTGGTGGTCTTCAGCCAGGCGCCAAGCGGGAG...TTGAAAGGACAGCAGCGTGTTTCCCAGCGGCAGTCTCCCATTCCCCTGTCCCCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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CDS-3UTR CCA 90 bp | GAAGCTCTGTGCAGGAGCAGAGCAGCGCCCAGAACTCTCACAGGCCAACCAAATGGGCGCTCTCCCGCTTaGCGCCTGGCTGAAGACCAC | + |
Preference number: 4 (lower is better) Translates to: EALCRSRAAPRTLTGQPNGRSPA*RLAEDH Trigger: GTGGTCTTCAGCCAGGCGCCAAGCGGGAGAGCGCCC...ATTTGGTTGGCCTGTGAGAGTTCTGGGCGCTGCTCTGCTCCTGCACAGAGCTTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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CDS-3UTR CCA 90 bp | GGGACCAGGCACAGGGCGCTTCTACAGAGCCATCATGGGTCCTCTGTGGCTGACCAGAGATGTTCGGCTTaGACCACGCCCACTGCTCCA | + |
Preference number: 4 (lower is better) Translates to: GTRHRALLQSHHGSSVADQRCSA*TTPTAP Trigger: TGGAGCAGTGGGCGTGGTCCAAGCCGAACATCTCTG...GTCAGCCACAGAGGACCCATGATGGCTCTGTAGAAGCGCCCTGTGCCTGGTCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
||
CDS-3UTR CCA 90 bp | AGGAGGGGGCAGAGCGAGCACAGTGGAGCCAGAGGTTGGCTTTCATTCCCAAGGTCTGCCTTTGAGCCCTaGGCCTCAGTGTTCCCCAGC | + |
Preference number: 4 (lower is better) Translates to: RRGQSEHSGARGWLSFPRSAFEP*ASVFPS Trigger: GCTGGGGAACACTGAGGCCCAGGGCTCAAAGGCAGA...CCTTGGGAATGAAAGCCAACCTCTGGCTCCACTGTGCTCGCTCTGCCCCCTCCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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CDS-3UTR TCA 90 bp | TCCCACTGCGGCGGCTGTCTGTCTTTCCAGGCTGAGCCTCCTGCAATCCTGCCTGGAAGGATAGGACCCTaGGGCCAATGGTCGAATCCA | + |
Preference number: 4 (lower is better) Translates to: SHCGGCLSFQAEPPAILPGRIGP*GQWSNP Trigger: TGGATTCGACCATTGGCCTCAGGGTCCTATCCTTCC...AGGCAGGATTGCAGGAGGCTCAGCCTGGAAAGACAGACAGCCGCCGCAGTGGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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CDS-3UTR GCA 90 bp | CCCCTCTCCTGGTTGGCTGCACCTCTTCTAGGAAATGAAGTGAAGGCAGCAAGGGCCCAGGGACCTGGGTaGATGTGCAGCAGCCAGGCA | + |
Preference number: 4 (lower is better) Translates to: PLSWLAAPLLGNEVKAARAQGPG*MCSSQA Trigger: TGCCTGGCTGCTGCACATGCACCCAGGTCCCTGGGC...CCTTGCTGCCTTCACTTCATTTCCTAGAAGAGGTGCAGCCAACCAGGAGAGGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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CDS-3UTR TCA 90 bp | GGGACCAGGCACAGGGCGCTTCTACAGAGCCATCATGGGTCCTCTGTGGCTGACAGTGGCACTGATAGGTaGCGGGCGAGAGTTCAAACT | + |
Preference number: 4 (lower is better) Translates to: GTRHRALLQSHHGSSVADSGTDR*RARVQT Trigger: AGTTTGAACTCTCGCCCGTCACCTATCAGTGCCACT...GTCAGCCACAGAGGACCCATGATGGCTCTGTAGAAGCGCCCTGTGCCTGGTCCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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CDS-3UTR TCA 90 bp | AAAAGACCAACGGACAGGAAGGAGGCAGACAGACGGATGGACGGCGGCTCTATACCACTGCTCAGGCTCTaGCTCCCAGGGGAGCTTGGA | + |
Preference number: 4 (lower is better) Translates to: KRPTDRKEADRRMDGGSIPLLRL*LPGELG Trigger: TCCAAGCTCCCCTGGGAGTCAGAGCCTGAGCAGTGG...TATAGAGCCGCCGTCCATCCGTCTGTCTGCCTCCTTCCTGTCCGTTGGTCTTTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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CDS-3UTR GCA 90 bp | TCCCACTGCGGCGGCTGTCTGTCTTTCCAGGCTGAGCCTCCTGCAATCCTGCCTCAGAGGCAGATGGAGTaGTTGGAGACACGACCTGTA | + |
Preference number: 4 (lower is better) Translates to: SHCGGCLSFQAEPPAILPQRQME*LETRPV Trigger: TACAGGTCGTGTCTCCAAGCACTCCATCTGCCTCTG...AGGCAGGATTGCAGGAGGCTCAGCCTGGAAAGACAGACAGCCGCCGCAGTGGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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CDS-3UTR CCA 90 bp | CATGAGGCTGAGGAGACCACAGTCTCCACTGCTGATTCACTTCCCACAGCAACAGCCATCTCCTCTGGCTaGGGAGAGGCTCCCTTCCCG | + |
Preference number: 4 (lower is better) Translates to: HEAEETTVSTADSLPTATAISSG*GEAPFP Trigger: CGGGAAGGGAGCCTCTCCCCAGCCAGAGGAGATGGC...TGTTGCTGTGGGAAGTGAATCAGCAGTGGAGACTGTGGTCTCCTCAGCCTCATG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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CDS-3UTR CCA 90 bp | GAAGCTCTGTGCAGGAGCAGAGCAGCGCCCAGAACTCTCACAGGCCAACCAAATCACATTAAGGGACTGTaGAGGGTGGTGGCCCAGGCG | + |
Preference number: 4 (lower is better) Translates to: EALCRSRAAPRTLTGQPNHIKGL*RVVAQA Trigger: CGCCTGGGCCACCACCCTCCACAGTCCCTTAATGTG...ATTTGGTTGGCCTGTGAGAGTTCTGGGCGCTGCTCTGCTCCTGCACAGAGCTTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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CDS-3UTR TCA 90 bp | CATGAGGCTGAGGAGACCACAGTCTCCACTGCTGATTCACTTCCCACAGCAACAAGTTCAAACTGGGGCTaGGGGGCGCTCTCCCGCTTG | + |
Preference number: 4 (lower is better) Translates to: HEAEETTVSTADSLPTATSSNWG*GALSRL Trigger: CAAGCGGGAGAGCGCCCCTCAGCCCCAGTTTGAACT...TGTTGCTGTGGGAAGTGAATCAGCAGTGGAGACTGTGGTCTCCTCAGCCTCATG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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CDS-3UTR GCA 90 bp | CATGAGGCTGAGGAGACCACAGTCTCCACTGCTGATTCACTTCCCACAGCAACATTGGACCACGCCCACTaGTCCAGGTCCAGGACCCAG | + |
Preference number: 4 (lower is better) Translates to: HEAEETTVSTADSLPTATLDHAH*SRSRTQ Trigger: CTGGGTCCTGGACCTGGAGCAGTGGGCGTGGTCCAA...TGTTGCTGTGGGAAGTGAATCAGCAGTGGAGACTGTGGTCTCCTCAGCCTCATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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CDS-3UTR CCA 90 bp | CATGAGGCTGAGGAGACCACAGTCTCCACTGCTGATTCACTTCCCACAGCAACAACCATCTCCTTGGGCTaGTCCTGGGCGGGAGTTGGG | + |
Preference number: 4 (lower is better) Translates to: HEAEETTVSTADSLPTATTISLG*SWAGVG Trigger: CCCAACTCCCGCCCAGGACCAGCCCAAGGAGATGGT...TGTTGCTGTGGGAAGTGAATCAGCAGTGGAGACTGTGGTCTCCTCAGCCTCATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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CDS-3UTR TCA 90 bp | AAAAGACCAACGGACAGGAAGGAGGCAGACAGACGGATGGACGGCGGCTCTATAGAGGCCCATGCGTGGTaGCAATGCAGTTCCACCAGT | + |
Preference number: 4 (lower is better) Translates to: KRPTDRKEADRRMDGGSIEAHAW*QCSSTS Trigger: ACTGGTGGAACTGCATTGTCACCACGCATGGGCCTC...TATAGAGCCGCCGTCCATCCGTCTGTCTGCCTCCTTCCTGTCCGTTGGTCTTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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CDS-3UTR CCA 90 bp | CATCATATAACTCAGGCTAAGCCCAAACCTGAAGTCATCCTGCCTCTGTCTGCCCCAGGCCCAGGGACCTaGGTGCATGTGCAGCAGCCA | + |
Preference number: 4 (lower is better) Translates to: HHITQAKPKPEVILPLSAPGPGT*VHVQQP Trigger: TGGCTGCTGCACATGCACCCAGGTCCCTGGGCCTGG...GGCAGACAGAGGCAGGATGACTTCAGGTTTGGGCTTAGCCTGAGTTATATGATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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CDS-3UTR CCA 90 bp | CGGGGACAGGGGAATGGGAGACTGCCGCTGGGAAACACGCTGCTGTCCTTTCAAAGCTCCGGGGCACCATaGTCTTCATTTTCTACCTTG | + |
Preference number: 4 (lower is better) Translates to: RGQGNGRLPLGNTLLSFQSSGAP*SSFSTL Trigger: CAAGGTAGAAAATGAAGACCATGGTGCCCCGGAGCT...TTGAAAGGACAGCAGCGTGTTTCCCAGCGGCAGTCTCCCATTCCCCTGTCCCCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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CDS-3UTR CCA 90 bp | CCCCTCTCCTGGTTGGCTGCACCTCTTCTAGGAAATGAAGTGAAGGCAGCAAGGCTCAGGAACCAGGGCTaGAGGAGTGGCACTGATAGG | + |
Preference number: 4 (lower is better) Translates to: PLSWLAAPLLGNEVKAARLRNQG*RSGTDR Trigger: CCTATCAGTGCCACTCCTCCAGCCCTGGTTCCTGAG...CCTTGCTGCCTTCACTTCATTTCCTAGAAGAGGTGCAGCCAACCAGGAGAGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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3UTR CAA 72 bp | AGCATGACTCCAGCACGTGGGGAACAGGGTTTCCTGTaGGGTGACTTCTCTGGATCACAGAGGACAGAAGGG | + |
Preference number: 4 (lower is better) Translates to: SMTPARGEQGFL*GDFSGSQRTEG Trigger: CCCTTCTGTCCTCTGTGATCCAGAGAAGTCACCCAACAGGAAACCCTGTTCCCCACGTGCTGGAGTCATGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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CDS-3UTR TCA 90 bp | GGTCTAGTCAGCAGCAGAGTACAAAGGCCAGCACAGCCTCCACTAAGACCACAAGCCTCCAGAGGTCATTaGAGGCAGCATTGCAACTGC | + |
Preference number: 4 (lower is better) Translates to: GLVSSRVQRPAQPPLRPQASRGH*RQHCNC Trigger: GCAGTTGCAATGCTGCCTTCAATGACCTCTGGAGGC...TTGTGGTCTTAGTGGAGGCTGTGCTGGCCTTTGTACTCTGCTGCTGACTAGACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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CDS-3UTR TCA 90 bp | TCCCAAATGGCTGGTTGCAGTCGAGGCTCATTCTGTTTTCTCTGGAGGGACTGCCTTCATTTTCTACCTTaGGTGGCTGCCAGGCCCAGG | + |
Preference number: 4 (lower is better) Translates to: SQMAGCSRGSFCFLWRDCLHFLP*VAARPR Trigger: CCTGGGCCTGGCAGCCACTCAAGGTAGAAAATGAAG...GCAGTCCCTCCAGAGAAAACAGAATGAGCCTCGACTGCAACCAGCCATTTGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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CDS-3UTR TCA 90 bp | AGGGCAAGCCCAGCATTGCCTTCAACAAAACTCCAGTTTCCTTCTACCTTACTGCGCTTGGCGCCTGGCTaGAGACCACCACACACTGTC | + |
Preference number: 4 (lower is better) Translates to: RASPALPSTKLQFPSTLLRLAPG*RPPHTV Trigger: GACAGTGTGTGGTGGTCTTCAGCCAGGCGCCAAGCG...CAGTAAGGTAGAAGGAAACTGGAGTTTTGTTGAAGGCAATGCTGGGCTTGCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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CDS-3UTR GCA 90 bp | AAAAGACCAACGGACAGGAAGGAGGCAGACAGACGGATGGACGGCGGCTCTATAAGGCAGCATTGCAACTaGTCTGCGTACAGCCACCAA | + |
Preference number: 4 (lower is better) Translates to: KRPTDRKEADRRMDGGSIRQHCN*SAYSHQ Trigger: TTGGTGGCTGTACGCAGAGCAGTTGCAATGCTGCCT...TATAGAGCCGCCGTCCATCCGTCTGTCTGCCTCCTTCCTGTCCGTTGGTCTTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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CDS-3UTR GCA 90 bp | GCCTCCTGCAATCCTGCCTTCTCTCCTCTTCTTAAGTTAGGGGAGTTCCGAGACGCACTGTTTCTCCACTaGTCAGGCTCTGACTCCCAG | + |
Preference number: 4 (lower is better) Translates to: ASCNPAFSPLLKLGEFRDALFLH*SGSDSQ Trigger: CTGGGAGTCAGAGCCTGAGCAGTGGAGAAACAGTGC...GTCTCGGAACTCCCCTAACTTAAGAAGAGGAGAGAAGGCAGGATTGCAGGAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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CDS-3UTR CCA 90 bp | GCCTCCTGCAATCCTGCCTTCTCTCCTCTTCTTAAGTTAGGGGAGTTCCGAGACGGCACTGGCCACATGTaGTGGGGTGTGAACACCATT | + |
Preference number: 4 (lower is better) Translates to: ASCNPAFSPLLKLGEFRDGTGHM*WGVNTI Trigger: AATGGTGTTCACACCCCACCACATGTGGCCAGTGCC...GTCTCGGAACTCCCCTAACTTAAGAAGAGGAGAGAAGGCAGGATTGCAGGAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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CDS-3UTR TCA 90 bp | AGGAGGGGGCAGAGCGAGCACAGTGGAGCCAGAGGTTGGCTTTCATTCCCAAGGGTGTTCCTGGTATGGTaGAAGGAAGGACAGAATATA | + |
Preference number: 4 (lower is better) Translates to: RRGQSEHSGARGWLSFPRVFLVW*KEGQNI Trigger: TATATTCTGTCCTTCCTTTCACCATACCAGGAACAC...CCTTGGGAATGAAAGCCAACCTCTGGCTCCACTGTGCTCGCTCTGCCCCCTCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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CDS-3UTR GCA 90 bp | CCCCTCTCCTGGTTGGCTGCACCTCTTCTAGGAAATGAAGTGAAGGCAGCAAGGGCATTGCAACTGCTCTaGGTACAGCCACCAAAGACA | + |
Preference number: 4 (lower is better) Translates to: PLSWLAAPLLGNEVKAARALQLL*VQPPKT Trigger: TGTCTTTGGTGGCTGTACGCAGAGCAGTTGCAATGC...CCTTGCTGCCTTCACTTCATTTCCTAGAAGAGGTGCAGCCAACCAGGAGAGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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CDS-3UTR CCA 90 bp | AAAAGACCAACGGACAGGAAGGAGGCAGACAGACGGATGGACGGCGGCTCTATAAGTGCAGTTTCTTCTTaGTCCACGGCCATGACACTG | + |
Preference number: 4 (lower is better) Translates to: KRPTDRKEADRRMDGGSISAVSS*STAMTL Trigger: CAGTGTCATGGCCGTGGACCAAGAAGAAACTGCACT...TATAGAGCCGCCGTCCATCCGTCTGTCTGCCTCCTTCCTGTCCGTTGGTCTTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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CDS-3UTR CCA 90 bp | AGGGCAAGCCCAGCATTGCCTTCAACAAAACTCCAGTTTCCTTCTACCTTACTGGAGTGGCCCCAGCTTTaGGGGAAGGATAGGACCCTG | + |
Preference number: 4 (lower is better) Translates to: RASPALPSTKLQFPSTLLEWPQL*GKDRTL Trigger: CAGGGTCCTATCCTTCCCCCAAAGCTGGGGCCACTC...CAGTAAGGTAGAAGGAAACTGGAGTTTTGTTGAAGGCAATGCTGGGCTTGCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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CDS-3UTR CCA 90 bp | CATCATATAACTCAGGCTAAGCCCAAACCTGAAGTCATCCTGCCTCTGTCTGCCGCCGTCAGAGGCAGATaGAGTGCTTGGAGACACGAC | + |
Preference number: 4 (lower is better) Translates to: HHITQAKPKPEVILPLSAAVRGR*SAWRHD Trigger: GTCGTGTCTCCAAGCACTCCATCTGCCTCTGACGGC...GGCAGACAGAGGCAGGATGACTTCAGGTTTGGGCTTAGCCTGAGTTATATGATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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3UTR CAA 72 bp | ACAGCACTCAGGGACCATCAAGTCCCAAATGGCTGGTaGCAGTCGAGGCTCATTCTGTTTTCTCTGGAGGGA | + |
Preference number: 4 (lower is better) Translates to: TALRDHQVPNGW*QSRLILFSLEG Trigger: TCCCTCCAGAGAAAACAGAATGAGCCTCGACTGCAACCAGCCATTTGGGACTTGATGGTCCCTGAGTGCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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CDS-3UTR TCA 90 bp | CATCATATAACTCAGGCTAAGCCCAAACCTGAAGTCATCCTGCCTCTGTCTGCCATCGGGGGTAAGGAATaGCCATCTCCTTGGGCTGGT | + |
Preference number: 4 (lower is better) Translates to: HHITQAKPKPEVILPLSAIGGKE*PSPWAG Trigger: ACCAGCCCAAGGAGATGGTCATTCCTTACCCCCGAT...GGCAGACAGAGGCAGGATGACTTCAGGTTTGGGCTTAGCCTGAGTTATATGATG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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CDS-3UTR GCA 90 bp | AAAAGACCAACGGACAGGAAGGAGGCAGACAGACGGATGGACGGCGGCTCTATACATTGTCCCTTCCAGTaGAGTTTCTTCTTGGTCCAC | + |
Preference number: 4 (lower is better) Translates to: KRPTDRKEADRRMDGGSIHCPFQ*SFFLVH Trigger: GTGGACCAAGAAGAAACTGCACTGGAAGGGACAATG...TATAGAGCCGCCGTCCATCCGTCTGTCTGCCTCCTTCCTGTCCGTTGGTCTTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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CDS-3UTR GCA 90 bp | CATGAGGCTGAGGAGACCACAGTCTCCACTGCTGATTCACTTCCCACAGCAACAGTCGATACCACTGTTTaGAGACCAGAGCTGCAGTCT | + |
Preference number: 4 (lower is better) Translates to: HEAEETTVSTADSLPTATVDTTV*RPELQS Trigger: AGACTGCAGCTCTGGTCTGCAAACAGTGGTATCGAC...TGTTGCTGTGGGAAGTGAATCAGCAGTGGAGACTGTGGTCTCCTCAGCCTCATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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CDS-3UTR GCA 90 bp | TCCCACTGCGGCGGCTGTCTGTCTTTCCAGGCTGAGCCTCCTGCAATCCTGCCTTCTAGCACATACATCTaGATAGGTTTGCAGTTCATA | + |
Preference number: 4 (lower is better) Translates to: SHCGGCLSFQAEPPAILPSSTYI*IGLQFI Trigger: TATGAACTGCAAACCTATGCAGATGTATGTGCTAGA...AGGCAGGATTGCAGGAGGCTCAGCCTGGAAAGACAGACAGCCGCCGCAGTGGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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CDS-3UTR CCA 90 bp | AGGGCAAGCCCAGCATTGCCTTCAACAAAACTCCAGTTTCCTTCTACCTTACTGTGTACACGACCAGAGTaGCCCCAGCTTTGGGGGAAG | + |
Preference number: 4 (lower is better) Translates to: RASPALPSTKLQFPSTLLCTRPE*PQLWGK Trigger: CTTCCCCCAAAGCTGGGGCCACTCTGGTCGTGTACA...CAGTAAGGTAGAAGGAAACTGGAGTTTTGTTGAAGGCAATGCTGGGCTTGCCCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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CDS-3UTR CCA 90 bp | AGGGCAAGCCCAGCATTGCCTTCAACAAAACTCCAGTTTCCTTCTACCTTACTGACTCCCAGGGGAGCTTaGAGAAGACCCAAGAGGAGG | + |
Preference number: 4 (lower is better) Translates to: RASPALPSTKLQFPSTLLTPRGA*RRPKRR Trigger: CCTCCTCTTGGGTCTTCTCCAAGCTCCCCTGGGAGT...CAGTAAGGTAGAAGGAAACTGGAGTTTTGTTGAAGGCAATGCTGGGCTTGCCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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3UTR CAA 72 bp | CAAACCAACCAACCAACCAACCAACCCCTCTCCTGGTaGGCTGCACCTCTTCTAGGAAATGAAGTGAAGGCA | + |
Preference number: 4 (lower is better) Translates to: QTNQPTNQPLSW*AAPLLGNEVKA Trigger: TGCCTTCACTTCATTTCCTAGAAGAGGTGCAGCCAACCAGGAGAGGGGTTGGTTGGTTGGTTGGTTGGTTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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3UTR CAA 72 bp | TGCCTGTCTACTTGGGAGAAGTCGAAGAATCAACAGTaGACAGCCAGCTTAGGAAGGCCACAGGGGAAAGAG | + |
Preference number: 4 (lower is better) Translates to: CLSTWEKSKNQQ*TASLGRPQGKE Trigger: CTCTTTCCCCTGTGGCCTTCCTAAGCTGGCTGTCAACTGTTGATTCTTCGACTTCTCCCAAGTAGACAGGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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CDS-3UTR TCA 90 bp | GCCTCCTGCAATCCTGCCTTCTCTCCTCTTCTTAAGTTAGGGGAGTTCCGAGACGACGGCGAGTACGTGTaGATTTCATCAAAGAATCTC | + |
Preference number: 4 (lower is better) Translates to: ASCNPAFSPLLKLGEFRDDGEYV*ISSKNL Trigger: GAGATTCTTTGATGAAATTCACACGTACTCGCCGTC...GTCTCGGAACTCCCCTAACTTAAGAAGAGGAGAGAAGGCAGGATTGCAGGAGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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CDS-3UTR TCA 90 bp | TCCCAAATGGCTGGTTGCAGTCGAGGCTCATTCTGTTTTCTCTGGAGGGACTGCACAAATTTCCACCATTaGGAATGGGAGAGCCATCTC | + |
Preference number: 4 (lower is better) Translates to: SQMAGCSRGSFCFLWRDCTNFHH*EWESHL Trigger: GAGATGGCTCTCCCATTCTCAATGGTGGAAATTTGT...GCAGTCCCTCCAGAGAAAACAGAATGAGCCTCGACTGCAACCAGCCATTTGGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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CDS-3UTR CCA 90 bp | TCCCAAATGGCTGGTTGCAGTCGAGGCTCATTCTGTTTTCTCTGGAGGGACTGCCCGGCAGCTCAGACATaGACCTATTATGTCTTGTTT | + |
Preference number: 4 (lower is better) Translates to: SQMAGCSRGSFCFLWRDCPAAQT*TYYVLF Trigger: AAACAAGACATAATAGGTCCATGTCTGAGCTGCCGG...GCAGTCCCTCCAGAGAAAACAGAATGAGCCTCGACTGCAACCAGCCATTTGGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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CDS-3UTR CCA 90 bp | TGCCGCTGGGAAACACGCTGCTGTCCTTTCAATTTCAGTTTTAAAGGTAAAATACCCCTGCAAGGGCACTaGCCACATGTGGTGGGGTGT | + |
Preference number: 4 (lower is better) Translates to: CRWETRCCPFNFSFKGKIPLQGH*PHVVGC Trigger: ACACCCCACCACATGTGGCCAGTGCCCTTGCAGGGG...TATTTTACCTTTAAAACTGAAATTGAAAGGACAGCAGCGTGTTTCCCAGCGGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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CDS-3UTR CCA 90 bp | AAGTCTCAGTCCAAATGTTTGCACACTGGAAAATTCCAAATTAAAGGACACAGAAGGGACTGTGGAGGGTaGTGGCCCAGGCGCCGAGCA | + |
Preference number: 4 (lower is better) Translates to: KSQSKCLHTGKFQIKGHRRDCGG*WPRRRA Trigger: TGCTCGGCGCCTGGGCCACCACCCTCCACAGTCCCT...TCTGTGTCCTTTAATTTGGAATTTTCCAGTGTGCAAACATTTGGACTGAGACTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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CDS-3UTR CCA 90 bp | AAAAGACCAACGGACAGGAAGGAGGCAGACAGACGGATGGACGGCGGCTCTATATTGCAGTTCATACTCTaGTACAAGGGTTTACCCACA | + |
Preference number: 4 (lower is better) Translates to: KRPTDRKEADRRMDGGSILQFIL*YKGLPT Trigger: TGTGGGTAAACCCTTGTACCAGAGTATGAACTGCAA...TATAGAGCCGCCGTCCATCCGTCTGTCTGCCTCCTTCCTGTCCGTTGGTCTTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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CDS-3UTR CCA 90 bp | TGCCGCTGGGAAACACGCTGCTGTCCTTTCAATTTCAGTTTTAAAGGTAAAATACTCGAGGGTGTGGACTaGGGCCAGAGATGTTCGGCT | + |
Preference number: 4 (lower is better) Translates to: CRWETRCCPFNFSFKGKILEGVD*GQRCSA Trigger: AGCCGAACATCTCTGGCCCCAGTCCACACCCTCGAG...TATTTTACCTTTAAAACTGAAATTGAAAGGACAGCAGCGTGTTTCCCAGCGGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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3UTR CAA 72 bp | AGCAATGCTAGGCTGCTTATCTGCTGGCCTTATCTCTaGAGTCAAGATCCCACAGGATCAGTCTTGGCCAAA | + |
Preference number: 4 (lower is better) Translates to: SNARLLICWPYL*SQDPTGSVLAK Trigger: TTTGGCCAAGACTGATCCTGTGGGATCTTGACTCAAGAGATAAGGCCAGCAGATAAGCAGCCTAGCATTGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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3UTR CAA 72 bp | ACCCTGGACTCCTTCAGATCCTCCCCGCTGTCATTTTaGCTGGTGACCACAGATAATGCAAATAGAGTACGT | + |
Preference number: 4 (lower is better) Translates to: TLDSFRSSPLSF*LVTTDNANRVR Trigger: ACGTACTCTATTTGCATTATCTGTGGTCACCAGCAAAAATGACAGCGGGGAGGATCTGAAGGAGTCCAGGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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CDS-3UTR TCA 90 bp | TGCCGCTGGGAAACACGCTGCTGTCCTTTCAATTTCAGTTTTAAAGGTAAAATAGTCCGGCTCTCCCACTaGATGTTTCCTTCCTGGACA | + |
Preference number: 4 (lower is better) Translates to: CRWETRCCPFNFSFKGKIVRLSH*MFPSWT Trigger: TGTCCAGGAAGGAAACATTCAGTGGGAGAGCCGGAC...TATTTTACCTTTAAAACTGAAATTGAAAGGACAGCAGCGTGTTTCCCAGCGGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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CDS-3UTR CCA 90 bp | AAGTCTCAGTCCAAATGTTTGCACACTGGAAAATTCCAAATTAAAGGACACAGAGTCCTGGGCGGGAGTTaGGCACTGTTTCTCCACTGC | + |
Preference number: 4 (lower is better) Translates to: KSQSKCLHTGKFQIKGHRVLGGS*ALFLHC Trigger: GCAGTGGAGAAACAGTGCCCAACTCCCGCCCAGGAC...TCTGTGTCCTTTAATTTGGAATTTTCCAGTGTGCAAACATTTGGACTGAGACTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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3UTR CAA 72 bp | CCCAGCCTGGAGCAAGTTAGGCATGGAATTGGAGTTTaGGTTTATGGGAGTTGCATTGTTTTCCCAAGTCTC | + |
Preference number: 4 (lower is better) Translates to: PSLEQVRHGIGV*VYGSCIVFPSL Trigger: GAGACTTGGGAAAACAATGCAACTCCCATAAACCAAAACTCCAATTCCATGCCTAACTTGCTCCAGGCTGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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CDS-3UTR CCA 90 bp | AAGTCTCAGTCCAAATGTTTGCACACTGGAAAATTCCAAATTAAAGGACACAGAACCTCCAACACTGGGTaGGGGTCCTCATCTTGCTCC | + |
Preference number: 4 (lower is better) Translates to: KSQSKCLHTGKFQIKGHRTSNTG*GSSSCS Trigger: GGAGCAAGATGAGGACCCCCACCCAGTGTTGGAGGT...TCTGTGTCCTTTAATTTGGAATTTTCCAGTGTGCAAACATTTGGACTGAGACTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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CDS-3UTR GCA 90 bp | GCATTGTTTTCCCAAGTCTCAGTCCAAATGTTTGCACACTGGAAAATTCCAAATTGGGGGTCCTCATCTTaGTCCATTGTCCCTTCCAGT | + |
Preference number: 4 (lower is better) Translates to: ALFSQVSVQMFAHWKIPNWGSSS*SIVPSS Trigger: ACTGGAAGGGACAATGGAGCAAGATGAGGACCCCCA...ATTTGGAATTTTCCAGTGTGCAAACATTTGGACTGAGACTTGGGAAAACAATGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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CDS-3UTR TCA 90 bp | AAGTCTCAGTCCAAATGTTTGCACACTGGAAAATTCCAAATTAAAGGACACAGACCTGGACAGCCTTCATaGAGCCATGGTAACACTGGT | + |
Preference number: 4 (lower is better) Translates to: KSQSKCLHTGKFQIKGHRPGQPS*SHGNTG Trigger: ACCAGTGTTACCATGGCTTCATGAAGGCTGTCCAGG...TCTGTGTCCTTTAATTTGGAATTTTCCAGTGTGCAAACATTTGGACTGAGACTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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CDS-3UTR TCA 90 bp | GCATTGTTTTCCCAAGTCTCAGTCCAAATGTTTGCACACTGGAAAATTCCAAATTGGATGACATCGCTTTaGTGGCTTCCAAACTCCGAC | + |
Preference number: 4 (lower is better) Translates to: ALFSQVSVQMFAHWKIPNWMTSL*WLPNSD Trigger: GTCGGAGTTTGGAAGCCATCAAAGCGATGTCATCCA...ATTTGGAATTTTCCAGTGTGCAAACATTTGGACTGAGACTTGGGAAAACAATGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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3UTR CAA 72 bp | GGCATGGAATTGGAGTTTTGGTTTATGGGAGTTGCATaGTTTTCCCAAGTCTCAGTCCAAATGTTTGCACAC | + |
Preference number: 4 (lower is better) Translates to: GMELEFWFMGVA*FSQVSVQMFAH Trigger: GTGTGCAAACATTTGGACTGAGACTTGGGAAAACAATGCAACTCCCATAAACCAAAACTCCAATTCCATGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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3UTR CAA 72 bp | CTTTCTAAGAGGTTAAGATTTCTGTTGCCTGTCTACTaGGGAGAAGTCGAAGAATCAACAGTTGACAGCCAG | + |
Preference number: 4 (lower is better) Translates to: LSKRLRFLLPVY*GEVEESTVDSQ Trigger: CTGGCTGTCAACTGTTGATTCTTCGACTTCTCCCAAGTAGACAGGCAACAGAAATCTTAACCTCTTAGAAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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CDS-3UTR CCA 90 bp | AAGTCTCAGTCCAAATGTTTGCACACTGGAAAATTCCAAATTAAAGGACACAGACAAGGCGTTTGTCTTTaGGTAGTACTTCACATTCTG | + |
Preference number: 4 (lower is better) Translates to: KSQSKCLHTGKFQIKGHRQGVCL*VVLHIL Trigger: CAGAATGTGAAGTACTACCCAAAGACAAACGCCTTG...TCTGTGTCCTTTAATTTGGAATTTTCCAGTGTGCAAACATTTGGACTGAGACTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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3UTR CAA 72 bp | CAACTATGGTTTTTGGCAACTTGCAACCAAACACGATaGTCGGAAAATTCCCTAATCAGACATTTGAATGTT | + |
Preference number: 4 (lower is better) Translates to: QLWFLATCNQTR*SENSLIRHLNV Trigger: AACATTCAAATGTCTGATTAGGGAATTTTCCGACAATCGTGTTTGGTTGCAAGTTGCCAAAAACCATAGTTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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3UTR CAA 72 bp | TTGTCGGAAAATTCCCTAATCAGACATTTGAATGTTTaGCTAAGACATGTAGGGAGAACTCAAAAAGACCAA | + |
Preference number: 4 (lower is better) Translates to: LSENSLIRHLNV*LRHVGRTQKDQ Trigger: TTGGTCTTTTTGAGTTCTCCCTACATGTCTTAGCAAAACATTCAAATGTCTGATTAGGGAATTTTCCGACAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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CDS TCA 90 bp | CTCTCGGGTCTCAGGAACCAGGGCTGGAGGAGTGGCACTGATAGGTaGCGGGCGAGAGTTCAAACTGGGGCTGAGGGGCGCTCTCCCGCT | + |
Preference number: 5 (lower is better) Translates to: LSGLRNQGWRSGTDR*RARVQTGAEGRSPA Trigger: AGCGGGAGAGCGCCCCTCAGCCCCAGTTTGAACTCTCGCCCGTCACCTATCAGTGCCACTCCTCCAGCCCTGGTTCCTGAGACCCGAGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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CDS TCA 90 bp | TGTGGAGGGTGGTGGCCCAGGCGCCGAGCAATCGGGGGTAAGGAATaGCCATCTCCTTGGGCTGGTCCTGGGCGGGAGTTGGGCACTGTT | + |
Preference number: 5 (lower is better) Translates to: CGGWWPRRRAIGGKE*PSPWAGPGRELGTV Trigger: AACAGTGCCCAACTCCCGCCCAGGACCAGCCCAAGGAGATGGTCATTCCTTACCCCCGATTGCTCGGCGCCTGGGCCACCACCCTCCACA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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CDS CCA 90 bp | CGGCCATTAACACAGGGCGCTTCGTCCATACTCCTCACCGGGGACTaGGAGCGGTACTCTCGGGTCTCAGGAACCAGGGCTGGAGGAGTG | + |
Preference number: 5 (lower is better) Translates to: RPLTQGASSILLTGD*ERYSRVSGTRAGGV Trigger: CACTCCTCCAGCCCTGGTTCCTGAGACCCGAGAGTACCGCTCCCAGTCCCCGGTGAGGAGTATGGACGAAGCGCCCTGTGTTAATGGCCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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CDS GCA 90 bp | GGGTGTGGACTGGGGCCAGAGATGTTCGGCTTGGACCACGCCCACTaGTCCAGGTCCAGGACCCAGACTTCATTGCTCATCTGCCGGGAT | + |
Preference number: 5 (lower is better) Translates to: GCGLGPEMFGLDHAH*SRSRTQTSLLICRD Trigger: ATCCCGGCAGATGAGCAATGAAGTCTGGGTCCTGGACCTGGAGCAGTGGGCGTGGTCCAAGCCGAACATCTCTGGCCCCAGTCCACACCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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CDS GCA 90 bp | CTCCTTGGGCTGGTCCTGGGCGGGAGTTGGGCACTGTTTCTCCACTaGTCAGGCTCTGACTCCCAGGGGAGCTTGGAGAAGACCCAAGAG | + |
Preference number: 5 (lower is better) Translates to: LLGLVLGGSWALFLH*SGSDSQGSLEKTQE Trigger: CTCTTGGGTCTTCTCCAAGCTCCCCTGGGAGTCAGAGCCTGAGCAGTGGAGAAACAGTGCCCAACTCCCGCCCAGGACCAGCCCAAGGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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CDS-3UTR CAA 90 bp | GCCGCAGCAGGCTCGTGCCTGGGAGATGCGGGGACAGGGGAATGGGAGACTGCCTCATTGAAGGCAGCATaGCAACTGCTCTGCGTACAG | + |
Preference number: 5 (lower is better) Translates to: AAAGSCLGDAGTGEWETASLKAA*QLLCVQ Trigger: CTGTACGCAGAGCAGTTGCAATGCTGCCTTCAATGA...GGCAGTCTCCCATTCCCCTGTCCCCGCATCTCCCAGGCACGAGCCTGCTGCGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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CDS GCA 90 bp | GATGGCTTCCAAACTCCGACGCAGGGCACCGGGAGATACAGCCCCTaGAAGGGCACTGGCCACATGTGGTGGGGTGTGAACACCATTGGT | + |
Preference number: 5 (lower is better) Translates to: DGFQTPTQGTGRYSP*KGTGHMWWGVNTIG Trigger: ACCAATGGTGTTCACACCCCACCACATGTGGCCAGTGCCCTTGCAGGGGCTGTATCTCCCGGTGCCCTGCGTCGGAGTTTGGAAGCCATC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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CDS CCA 90 bp | CAGGGCACCGGGAGATACAGCCCCTGCAAGGGCACTGGCCACATGTaGTGGGGTGTGAACACCATTGGTCTGTTCTGGAGGGTGTCTCAC | + |
Preference number: 5 (lower is better) Translates to: QGTGRYSPCKGTGHM*WGVNTIGLFWRVSH Trigger: GTGAGACACCCTCCAGAACAGACCAATGGTGTTCACACCCCACCACATGTGGCCAGTGCCCTTGCAGGGGCTGTATCTCCCGGTGCCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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CDS CCA 90 bp | AACTCCGACGCAGGGCACCGGGAGATACAGCCCCTGCAAGGGCACTaGCCACATGTGGTGGGGTGTGAACACCATTGGTCTGTTCTGGAG | + |
Preference number: 5 (lower is better) Translates to: NSDAGHREIQPLQGH*PHVVGCEHHWSVLE Trigger: CTCCAGAACAGACCAATGGTGTTCACACCCCACCACATGTGGCCAGTGCCCTTGCAGGGGCTGTATCTCCCGGTGCCCTGCGTCGGAGTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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CDS-3UTR CAA 90 bp | TCCCACTGCGGCGGCTGTCTGTCTTTCCAGGCTGAGCCTCCTGCAATCCTGCCTAGGCAGATGGAGTGCTaGGAGACACGACCTGTACGG | + |
Preference number: 5 (lower is better) Translates to: SHCGGCLSFQAEPPAILPRQMEC*ETRPVR Trigger: CCGTACAGGTCGTGTCTCCAAGCACTCCATCTGCCT...AGGCAGGATTGCAGGAGGCTCAGCCTGGAAAGACAGACAGCCGCCGCAGTGGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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CDS TCA 90 bp | GACTTAGTGCTGCCGAGGCTGAGGGGCCTTTGGATGACATCGCTTTaGTGGCTTCCAAACTCCGACGCAGGGCACCGGGAGATACAGCCC | + |
Preference number: 5 (lower is better) Translates to: DLVLPRLRGLWMTSL*WLPNSDAGHREIQP Trigger: GGGCTGTATCTCCCGGTGCCCTGCGTCGGAGTTTGGAAGCCATCAAAGCGATGTCATCCAAAGGCCCCTCAGCCTCGGCAGCACTAAGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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CDS TCA 90 bp | GGTCCTGGGCGGGAGTTGGGCACTGTTTCTCCACTGCTCAGGCTCTaGCTCCCAGGGGAGCTTGGAGAAGACCCAAGAGGAGGACTTAGT | + |
Preference number: 5 (lower is better) Translates to: GPGRELGTVSPLLRL*LPGELGEDPRGGLS Trigger: ACTAAGTCCTCCTCTTGGGTCTTCTCCAAGCTCCCCTGGGAGTCAGAGCCTGAGCAGTGGAGAAACAGTGCCCAACTCCCGCCCAGGACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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CDS CCA 90 bp | GGCACCGGGAGATACAGCCCCTGCAAGGGCACTGGCCACATGTGGTaGGGTGTGAACACCATTGGTCTGTTCTGGAGGGTGTCTCACACT | + |
Preference number: 5 (lower is better) Translates to: GTGRYSPCKGTGHMW*GVNTIGLFWRVSHT Trigger: AGTGTGAGACACCCTCCAGAACAGACCAATGGTGTTCACACCCCACCACATGTGGCCAGTGCCCTTGCAGGGGCTGTATCTCCCGGTGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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CDS-3UTR CAA 90 bp | CGGGGACAGGGGAATGGGAGACTGCCGCTGGGAAACACGCTGCTGTCCTTTCAAGTGGGGGTCCTCATCTaGCTCCATTGTCCCTTCCAG | + |
Preference number: 5 (lower is better) Translates to: RGQGNGRLPLGNTLLSFQVGVLI*LHCPFQ Trigger: CTGGAAGGGACAATGGAGCAAGATGAGGACCCCCAC...TTGAAAGGACAGCAGCGTGTTTCCCAGCGGCAGTCTCCCATTCCCCTGTCCCCG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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CDS TCA 90 bp | GGAGATACAGCCCCTGCAAGGGCACTGGCCACATGTGGTGGGGTGTaGACACCATTGGTCTGTTCTGGAGGGTGTCTCACACTCCCTGCA | + |
Preference number: 5 (lower is better) Translates to: GDTAPARALATCGGV*TPLVCSGGCLTLPA Trigger: TGCAGGGAGTGTGAGACACCCTCCAGAACAGACCAATGGTGTTCACACCCCACCACATGTGGCCAGTGCCCTTGCAGGGGCTGTATCTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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CDS CCA 90 bp | CCCCTGCAAGGGCACTGGCCACATGTGGTGGGGTGTGAACACCATTaGTCTGTTCTGGAGGGTGTCTCACACTCCCTGCAACTGTCCTGT | + |
Preference number: 5 (lower is better) Translates to: PLQGHWPHVVGCEHH*SVLEGVSHSLQLSC Trigger: ACAGGACAGTTGCAGGGAGTGTGAGACACCCTCCAGAACAGACCAATGGTGTTCACACCCCACCACATGTGGCCAGTGCCCTTGCAGGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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CDS GCA 90 bp | TCTTCATTTTCTACCTTGAGTGGCTGCCAGGCCCAGGGACCTGGGTaGATGTGCAGCAGCCAGGCATCTTTGAACAGCGCATTGGGACCG | + |
Preference number: 5 (lower is better) Translates to: SSFSTLSGCQAQGPG*MCSSQASLNSALGP Trigger: CGGTCCCAATGCGCTGTTCAAAGATGCCTGGCTGCTGCACATGCACCCAGGTCCCTGGGCCTGGCAGCCACTCAAGGTAGAAAATGAAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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CDS CCA 90 bp | AGACAAATTTCCACCATTGAGAATGGGAGAGCCATCTCCTCTGGCTaGGGAGAGGCTCCCTTCCCGGGAACCCGAGGGAGTCTGCCTTTG | + |
Preference number: 5 (lower is better) Translates to: RQISTIENGRAISSG*GEAPFPGTRGSLPL Trigger: CAAAGGCAGACTCCCTCGGGTTCCCGGGAAGGGAGCCTCTCCCCAGCCAGAGGAGATGGCTCTCCCATTCTCAATGGTGGAAATTTGTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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CDS-3UTR CAA 90 bp | TCCCACTGCGGCGGCTGTCTGTCTTTCCAGGCTGAGCCTCCTGCAATCCTGCCTTGGTGGGCCACACCTTaGATAAGTCGATACCACTGT | + |
Preference number: 5 (lower is better) Translates to: SHCGGCLSFQAEPPAILPWWATP*ISRYHC Trigger: ACAGTGGTATCGACTTATCAAAGGTGTGGCCCACCA...AGGCAGGATTGCAGGAGGCTCAGCCTGGAAAGACAGACAGCCGCCGCAGTGGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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CDS-3UTR CAA 90 bp | GCCTCCTGCAATCCTGCCTTCTCTCCTCTTCTTAAGTTAGGGGAGTTCCGAGACGGAATGACCATCTCCTaGGGCTGGTCCTGGGCGGGA | + |
Preference number: 5 (lower is better) Translates to: ASCNPAFSPLLKLGEFRDGMTIS*GWSWAG Trigger: TCCCGCCCAGGACCAGCCCAAGGAGATGGTCATTCC...GTCTCGGAACTCCCCTAACTTAAGAAGAGGAGAGAAGGCAGGATTGCAGGAGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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CDS TCA 90 bp | AAGCACCCCCGACAGCTACTGTCCCTGGAGACAAATTTCCACCATTaGGAATGGGAGAGCCATCTCCTCTGGCTGGGGAGAGGCTCCCTT | + |
Preference number: 5 (lower is better) Translates to: KHPRQLLSLETNFHH*EWESHLLWLGRGSL Trigger: AAGGGAGCCTCTCCCCAGCCAGAGGAGATGGCTCTCCCATTCTCAATGGTGGAAATTTGTCTCCAGGGACAGTAGCTGTCGGGGGTGCTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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CDS CCA 90 bp | ATGGTCTTCATTTTCTACCTTGAGTGGCTGCCAGGCCCAGGGACCTaGGTGCATGTGCAGCAGCCAGGCATCTTTGAACAGCGCATTGGG | + |
Preference number: 5 (lower is better) Translates to: MVFIFYLEWLPGPGT*VHVQQPGIFEQRIG Trigger: CCCAATGCGCTGTTCAAAGATGCCTGGCTGCTGCACATGCACCCAGGTCCCTGGGCCTGGCAGCCACTCAAGGTAGAAAATGAAGACCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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CDS-3UTR CAA 90 bp | GGGACCAGGCACAGGGCGCTTCTACAGAGCCATCATGGGTCCTCTGTGGCTGACTTGGATGACATCGCTTaGATGGCTTCCAAACTCCGA | + |
Preference number: 5 (lower is better) Translates to: GTRHRALLQSHHGSSVADLDDIA*MASKLR Trigger: TCGGAGTTTGGAAGCCATCAAAGCGATGTCATCCAA...GTCAGCCACAGAGGACCCATGATGGCTCTGTAGAAGCGCCCTGTGCCTGGTCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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CDS-3UTR CAA 90 bp | GCCTCCTGCAATCCTGCCTTCTCTCCTCTTCTTAAGTTAGGGGAGTTCCGAGACGACTCCCAGGGGAGCTaGGAGAAGACCCAAGAGGAG | + |
Preference number: 5 (lower is better) Translates to: ASCNPAFSPLLKLGEFRDDSQGS*EKTQEE Trigger: CTCCTCTTGGGTCTTCTCCAAGCTCCCCTGGGAGTC...GTCTCGGAACTCCCCTAACTTAAGAAGAGGAGAGAAGGCAGGATTGCAGGAGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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CDS GCA 90 bp | TCACCTATCACACAGGAGGAATGGCCAGCCATGGGAGGAGGCCCATaGGTGGTGACAATGCAGTTCCACCAGTTTTTAGACGGCGAGTAC | + |
Preference number: 5 (lower is better) Translates to: SPITQEEWPAMGGGP*VVTMQFHQFLDGEY Trigger: GTACTCGCCGTCTAAAAACTGGTGGAACTGCATTGTCACCACGCATGGGCCTCCTCCCATGGCTGGCCATTCCTCCTGTGTGATAGGTGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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CDS GCA 90 bp | GAGAAAGTCCTACTTTTAGGTCGTAGCCGTCAGAGGCAGATGGAGTaGTTGGAGACACGACCTGTACGGGGCTGTCTAAGGAAGCACCCC | + |
Preference number: 5 (lower is better) Translates to: EKVLLLGRSRQRQME*LETRPVRGCLRKHP Trigger: GGGGTGCTTCCTTAGACAGCCCCGTACAGGTCGTGTCTCCAAGCACTCCATCTGCCTCTGACGGCTACGACCTAAAAGTAGGACTTTCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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CDS CCA 90 bp | AGTTGTATCATCTATAACAATCTGAGACTGGCCACCTCGAGGGTGTaGACTGGGGCCAGAGATGTTCGGCTTGGACCACGCCCACTGCTC | + |
Preference number: 5 (lower is better) Translates to: SCIIYNNLRLATSRV*TGARDVRLGPRPLL Trigger: GAGCAGTGGGCGTGGTCCAAGCCGAACATCTCTGGCCCCAGTCCACACCCTCGAGGTGGCCAGTCTCAGATTGTTATAGATGATACAACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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CDS-3UTR CAA 90 bp | CATCATATAACTCAGGCTAAGCCCAAACCTGAAGTCATCCTGCCTCTGTCTGCCCCAGAGATGTTCGGCTaGGACCACGCCCACTGCTCC | + |
Preference number: 5 (lower is better) Translates to: HHITQAKPKPEVILPLSAPEMFG*DHAHCS Trigger: GGAGCAGTGGGCGTGGTCCAAGCCGAACATCTCTGG...GGCAGACAGAGGCAGGATGACTTCAGGTTTGGGCTTAGCCTGAGTTATATGATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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CDS GCA 90 bp | TGTCTTGTTTCCTCAACCTCCAACACTGGGTGGGGGTCCTCATCTTaGTCCATTGTCCCTTCCAGTGCAGTTTCTTCTTGGTCCACGGCC | + |
Preference number: 5 (lower is better) Translates to: CLVSSTSNTGWGSSS*SIVPSSAVSSWSTA Trigger: GGCCGTGGACCAAGAAGAAACTGCACTGGAAGGGACAATGGAGCAAGATGAGGACCCCCACCCAGTGTTGGAGGTTGAGGAAACAAGACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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CDS CCA 90 bp | GGCACTGGCCACATGTGGTGGGGTGTGAACACCATTGGTCTGTTCTaGAGGGTGTCTCACACTCCCTGCAACTGTCCTGTTGTCTATACT | + |
Preference number: 5 (lower is better) Translates to: GTGHMWWGVNTIGLF*RVSHTPCNCPVVYT Trigger: AGTATAGACAACAGGACAGTTGCAGGGAGTGTGAGACACCCTCCAGAACAGACCAATGGTGTTCACACCCCACCACATGTGGCCAGTGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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CDS-3UTR CAA 90 bp | TCCCACTGCGGCGGCTGTCTGTCTTTCCAGGCTGAGCCTCCTGCAATCCTGCCTTGGACCTATTATGTCTaGTTTCCTCAACCTCCAACA | + |
Preference number: 5 (lower is better) Translates to: SHCGGCLSFQAEPPAILPWTYYV*FPQPPT Trigger: TGTTGGAGGTTGAGGAAACAAGACATAATAGGTCCA...AGGCAGGATTGCAGGAGGCTCAGCCTGGAAAGACAGACAGCCGCCGCAGTGGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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CDS-3UTR CAA 90 bp | CGGGGACAGGGGAATGGGAGACTGCCGCTGGGAAACACGCTGCTGTCCTTTCAAGACAAATTTCCACCATaGAGAATGGGAGAGCCATCT | + |
Preference number: 5 (lower is better) Translates to: RGQGNGRLPLGNTLLSFQDKFPP*RMGEPS Trigger: AGATGGCTCTCCCATTCTCAATGGTGGAAATTTGTC...TTGAAAGGACAGCAGCGTGTTTCCCAGCGGCAGTCTCCCATTCCCCTGTCCCCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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CDS TCA 90 bp | CCACACCCGCCAAGGATCAGAAGAGTTGTATCATCTATAACAATCTaGGACTGGCCACCTCGAGGGTGTGGACTGGGGCCAGAGATGTTC | + |
Preference number: 5 (lower is better) Translates to: PHPPRIRRVVSSITI*DWPPRGCGLGPEMF Trigger: GAACATCTCTGGCCCCAGTCCACACCCTCGAGGTGGCCAGTCTCAGATTGTTATAGATGATACAACTCTTCTGATCCTTGGCGGGTGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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CDS GCA 90 bp | CAACACTGGGTGGGGGTCCTCATCTTGCTCCATTGTCCCTTCCAGTaGAGTTTCTTCTTGGTCCACGGCCATGACACTGTCATCTTCACT | + |
Preference number: 5 (lower is better) Translates to: QHWVGVLILLHCPFQ*SFFLVHGHDTVIFT Trigger: AGTGAAGATGACAGTGTCATGGCCGTGGACCAAGAAGAAACTGCACTGGAAGGGACAATGGAGCAAGATGAGGACCCCCACCCAGTGTTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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CDS-3UTR CAA 90 bp | GCCTCCTGCAATCCTGCCTTCTCTCCTCTTCTTAAGTTAGGGGAGTTCCGAGACAGTCGATACCACTGTTaGCAGACCAGAGCTGCAGTC | + |
Preference number: 5 (lower is better) Translates to: ASCNPAFSPLLKLGEFRDSRYHC*QTRAAV Trigger: GACTGCAGCTCTGGTCTGCAAACAGTGGTATCGACT...GTCTCGGAACTCCCCTAACTTAAGAAGAGGAGAGAAGGCAGGATTGCAGGAGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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CDS-3UTR CAA 90 bp | CAAGTCCCAAATGGCTGGTTGCAGTCGAGGCTCATTCTGTTTTCTCTGGAGGGAAGCACTAGCAAGTCCTaGTACACGACCAGAGTGGCC | + |
Preference number: 5 (lower is better) Translates to: QVPNGWLQSRLILFSLEGSTSKS*YTTRVA Trigger: GGCCACTCTGGTCGTGTACAAGGACTTGCTAGTGCT...TCCCTCCAGAGAAAACAGAATGAGCCTCGACTGCAACCAGCCATTTGGGACTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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CDS-3UTR CAA 90 bp | TCCCAAATGGCTGGTTGCAGTCGAGGCTCATTCTGTTTTCTCTGGAGGGACTGCGATAGGGACTTGGCCTaGTCCAGCCACCAAATAGCA | + |
Preference number: 5 (lower is better) Translates to: SQMAGCSRGSFCFLWRDCDRDLA*SSHQIA Trigger: TGCTATTTGGTGGCTGGACAAGGCCAAGTCCCTATC...GCAGTCCCTCCAGAGAAAACAGAATGAGCCTCGACTGCAACCAGCCATTTGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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CDS-3UTR CAA 90 bp | GCCTCCTGCAATCCTGCCTTCTCTCCTCTTCTTAAGTTAGGGGAGTTCCGAGACGTGAACACTTTCCACTaGACTCGGCCCTTCTCCTTG | + |
Preference number: 5 (lower is better) Translates to: ASCNPAFSPLLKLGEFRDVNTFH*TRPFSL Trigger: CAAGGAGAAGGGCCGAGTCAAGTGGAAAGTGTTCAC...GTCTCGGAACTCCCCTAACTTAAGAAGAGGAGAGAAGGCAGGATTGCAGGAGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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CDS-3UTR CAA 90 bp | GAAGCTCTGTGCAGGAGCAGAGCAGCGCCCAGAACTCTCACAGGCCAACCAAATTTCACATTCTGCTTCTaGTCCATGAGCCCTCCAAAT | + |
Preference number: 5 (lower is better) Translates to: EALCRSRAAPRTLTGQPNFTFCF*SMSPPN Trigger: ATTTGGAGGGCTCATGGACAAGAAGCAGAATGTGAA...ATTTGGTTGGCCTGTGAGAGTTCTGGGCGCTGCTCTGCTCCTGCACAGAGCTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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CDS CCA 90 bp | CTCAGACATGGACCTATTATGTCTTGTTTCCTCAACCTCCAACACTaGGTGGGGGTCCTCATCTTGCTCCATTGTCCCTTCCAGTGCAGT | + |
Preference number: 5 (lower is better) Translates to: LRHGPIMSCFLNLQH*VGVLILLHCPFQCS Trigger: ACTGCACTGGAAGGGACAATGGAGCAAGATGAGGACCCCCACCCAGTGTTGGAGGTTGAGGAAACAAGACATAATAGGTCCATGTCTGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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CDS-3UTR CAA 90 bp | CATCATATAACTCAGGCTAAGCCCAAACCTGAAGTCATCCTGCCTCTGTCTGCCCAGTGCAGTTTCTTCTaGGTCCACGGCCATGACACT | + |
Preference number: 5 (lower is better) Translates to: HHITQAKPKPEVILPLSAQCSFF*VHGHDT Trigger: AGTGTCATGGCCGTGGACCAAGAAGAAACTGCACTG...GGCAGACAGAGGCAGGATGACTTCAGGTTTGGGCTTAGCCTGAGTTATATGATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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CDS-3UTR CAA 90 bp | CATCATATAACTCAGGCTAAGCCCAAACCTGAAGTCATCCTGCCTCTGTCTGCCAGCCTCCAGAGGTCATaGAAGGCAGCATTGCAACTG | + |
Preference number: 5 (lower is better) Translates to: HHITQAKPKPEVILPLSASLQRS*KAALQL Trigger: CAGTTGCAATGCTGCCTTCAATGACCTCTGGAGGCT...GGCAGACAGAGGCAGGATGACTTCAGGTTTGGGCTTAGCCTGAGTTATATGATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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CDS-3UTR CAA 90 bp | CATCATATAACTCAGGCTAAGCCCAAACCTGAAGTCATCCTGCCTCTGTCTGCCTCTTCATTTTCTACCTaGAGTGGCTGCCAGGCCCAG | + |
Preference number: 5 (lower is better) Translates to: HHITQAKPKPEVILPLSASSFST*SGCQAQ Trigger: CTGGGCCTGGCAGCCACTCAAGGTAGAAAATGAAGA...GGCAGACAGAGGCAGGATGACTTCAGGTTTGGGCTTAGCCTGAGTTATATGATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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CDS-3UTR CAA 90 bp | GAAGCTCTGTGCAGGAGCAGAGCAGCGCCCAGAACTCTCACAGGCCAACCAAATACAAGGCGTTTGTCTTaGGGTAGTACTTCACATTCT | + |
Preference number: 5 (lower is better) Translates to: EALCRSRAAPRTLTGQPNTRRLS*GSTSHS Trigger: AGAATGTGAAGTACTACCCAAAGACAAACGCCTTGT...ATTTGGTTGGCCTGTGAGAGTTCTGGGCGCTGCTCTGCTCCTGCACAGAGCTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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CDS GCA 90 bp | GGTGTGAACACCATTGGTCTGTTCTGGAGGGTGTCTCACACTCCCTaGAACTGTCCTGTTGTCTATACTATCCACGTGACTACTACTGGA | + |
Preference number: 5 (lower is better) Translates to: GVNTIGLFWRVSHTP*NCPVVYTIHVTTTG Trigger: TCCAGTAGTAGTCACGTGGATAGTATAGACAACAGGACAGTTGCAGGGAGTGTGAGACACCCTCCAGAACAGACCAATGGTGTTCACACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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CDS-3UTR CAA 90 bp | AAAAGACCAACGGACAGGAAGGAGGCAGACAGACGGATGGACGGCGGCTCTATACAAAGTACAAGGCGTTaGTCTTTGGGTAGTACTTCA | + |
Preference number: 5 (lower is better) Translates to: KRPTDRKEADRRMDGGSIQSTRR*SLGSTS Trigger: TGAAGTACTACCCAAAGACAAACGCCTTGTACTTTG...TATAGAGCCGCCGTCCATCCGTCTGTCTGCCTCCTTCCTGTCCGTTGGTCTTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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CDS CCA 90 bp | CGTGACTACTACTGGAAGCAGACTTCAGGTCCCAATTCAGATCAATaGAACTTAACCTCAGGTCCTTCTGATCTGGTAAAGACCCTCGTC | + |
Preference number: 5 (lower is better) Translates to: RDYYWKQTSGPNSDQ*NLTSGPSDLVKTLV Trigger: GACGAGGGTCTTTACCAGATCAGAAGGACCTGAGGTTAAGTTCCATTGATCTGAATTGGGACCTGAAGTCTGCTTCCAGTAGTAGTCACG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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CDS TCA 90 bp | TTCAGGTCCCAATTCAGATCAATGGAACTTAACCTCAGGTCCTTCTaGTCTGGTAAAGACCCTCGTCGAGGAGCTAGAGAAAGTCCTACT | + |
Preference number: 5 (lower is better) Translates to: FRSQFRSMELNLRSF*SGKDPRRGARESPT Trigger: AGTAGGACTTTCTCTAGCTCCTCGACGAGGGTCTTTACCAGATCAGAAGGACCTGAGGTTAAGTTCCATTGATCTGAATTGGGACCTGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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CDS TCA 90 bp | TGTCTCACACTCCCTGCAACTGTCCTGTTGTCTATACTATCCACGTaGCTACTACTGGAAGCAGACTTCAGGTCCCAATTCAGATCAATG | + |
Preference number: 5 (lower is better) Translates to: CLTLPATVLLSILST*LLLEADFRSQFRSM Trigger: CATTGATCTGAATTGGGACCTGAAGTCTGCTTCCAGTAGTAGTCACGTGGATAGTATAGACAACAGGACAGTTGCAGGGAGTGTGAGACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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CDS-3UTR CAA 90 bp | CATCATATAACTCAGGCTAAGCCCAAACCTGAAGTCATCCTGCCTCTGTCTGCCTACATCTGCATAGGTTaGCAGTTCATACTCTGGTAC | + |
Preference number: 5 (lower is better) Translates to: HHITQAKPKPEVILPLSAYICIG*QFILWY Trigger: GTACCAGAGTATGAACTGCAAACCTATGCAGATGTA...GGCAGACAGAGGCAGGATGACTTCAGGTTTGGGCTTAGCCTGAGTTATATGATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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CDS GCA 90 bp | ACTCGGCCCTTCTCCTTGGTGTCTTTAATGTCTAGCACATACATCTaGATAGGTTTGCAGTTCATACTCTGGTACAAGGGTTTACCCACA | + |
Preference number: 5 (lower is better) Translates to: TRPFSLVSLMSSTYI*IGLQFILWYKGLPT Trigger: TGTGGGTAAACCCTTGTACCAGAGTATGAACTGCAAACCTATGCAGATGTATGTGCTAGACATTAAAGACACCAAGGAGAAGGGCCGAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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CDS CCA 90 bp | TCCCTGCAACTGTCCTGTTGTCTATACTATCCACGTGACTACTACTaGAAGCAGACTTCAGGTCCCAATTCAGATCAATGGAACTTAACC | + |
Preference number: 5 (lower is better) Translates to: SLQLSCCLYYPRDYY*KQTSGPNSDQWNLT Trigger: GGTTAAGTTCCATTGATCTGAATTGGGACCTGAAGTCTGCTTCCAGTAGTAGTCACGTGGATAGTATAGACAACAGGACAGTTGCAGGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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CDS CCA 90 bp | TTAATGTCTAGCACATACATCTGCATAGGTTTGCAGTTCATACTCTaGTACAAGGGTTTACCCACATTAAGGGACTGTGGAGGGTGGTGG | + |
Preference number: 5 (lower is better) Translates to: LMSSTYICIGLQFIL*YKGLPTLRDCGGWW Trigger: CCACCACCCTCCACAGTCCCTTAATGTGGGTAAACCCTTGTACCAGAGTATGAACTGCAAACCTATGCAGATGTATGTGCTAGACATTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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CDS-3UTR CAA 90 bp | GCATTGTTTTCCCAAGTCTCAGTCCAAATGTTTGCACACTGGAAAATTCCAAATGTAAGGGATAGGGACTaGGCCTTGTCCAGCCACCAA | + |
Preference number: 5 (lower is better) Translates to: ALFSQVSVQMFAHWKIPNVRDRD*ALSSHQ Trigger: TTGGTGGCTGGACAAGGCCAAGTCCCTATCCCTTAC...ATTTGGAATTTTCCAGTGTGCAAACATTTGGACTGAGACTTGGGAAAACAATGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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CDS TCA 72 bp | CTCAGGAACCAGGGCTGGAGGAGTGGCACTGATAGGTaGCGGGCGAGAGTTCAAACTGGGGCTGAGGGGCGC | + |
Preference number: 6 (lower is better) Translates to: LRNQGWRSGTDR*RARVQTGAEGR Trigger: GCGCCCCTCAGCCCCAGTTTGAACTCTCGCCCGTCACCTATCAGTGCCACTCCTCCAGCCCTGGTTCCTGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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CDS CCA 72 bp | ACACAGGGCGCTTCGTCCATACTCCTCACCGGGGACTaGGAGCGGTACTCTCGGGTCTCAGGAACCAGGGCT | + |
Preference number: 6 (lower is better) Translates to: TQGASSILLTGD*ERYSRVSGTRA Trigger: AGCCCTGGTTCCTGAGACCCGAGAGTACCGCTCCCAGTCCCCGGTGAGGAGTATGGACGAAGCGCCCTGTGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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CDS CAA 90 bp | GACTGGCCACCTCGAGGGTGTGGACTGGGGCCAGAGATGTTCGGCTaGGACCACGCCCACTGCTCCAGGTCCAGGACCCAGACTTCATTG | + |
Preference number: 6 (lower is better) Translates to: DWPPRGCGLGPEMFG*DHAHCSRSRTQTSL Trigger: CAATGAAGTCTGGGTCCTGGACCTGGAGCAGTGGGCGTGGTCCAAGCCGAACATCTCTGGCCCCAGTCCACACCCTCGAGGTGGCCAGTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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CDS TCA 72 bp | CTGCCGAGGCTGAGGGGCCTTTGGATGACATCGCTTTaGTGGCTTCCAAACTCCGACGCAGGGCACCGGGAG | + |
Preference number: 6 (lower is better) Translates to: LPRLRGLWMTSL*WLPNSDAGHRE Trigger: CTCCCGGTGCCCTGCGTCGGAGTTTGGAAGCCATCAAAGCGATGTCATCCAAAGGCCCCTCAGCCTCGGCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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CDS CCA 72 bp | GCAGGGCACCGGGAGATACAGCCCCTGCAAGGGCACTaGCCACATGTGGTGGGGTGTGAACACCATTGGTCT | + |
Preference number: 6 (lower is better) Translates to: AGHREIQPLQGH*PHVVGCEHHWS Trigger: AGACCAATGGTGTTCACACCCCACCACATGTGGCCAGTGCCCTTGCAGGGGCTGTATCTCCCGGTGCCCTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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CDS CAA 72 bp | GCTGCCGAGGCTGAGGGGCCTTTGGATGACATCGCTTaGATGGCTTCCAAACTCCGACGCAGGGCACCGGGA | + |
Preference number: 6 (lower is better) Translates to: AAEAEGPLDDIA*MASKLRRRAPG Trigger: TCCCGGTGCCCTGCGTCGGAGTTTGGAAGCCATCAAAGCGATGTCATCCAAAGGCCCCTCAGCCTCGGCAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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CDS GCA 72 bp | CTGGGGCCAGAGATGTTCGGCTTGGACCACGCCCACTaGTCCAGGTCCAGGACCCAGACTTCATTGCTCATC | + |
Preference number: 6 (lower is better) Translates to: LGPEMFGLDHAH*SRSRTQTSLLI Trigger: GATGAGCAATGAAGTCTGGGTCCTGGACCTGGAGCAGTGGGCGTGGTCCAAGCCGAACATCTCTGGCCCCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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CDS CAA 90 bp | GGACTTAGTGCTGCCGAGGCTGAGGGGCCTTTGGATGACATCGCTTaGATGGCTTCCAAACTCCGACGCAGGGCACCGGGAGATACAGCC | + |
Preference number: 6 (lower is better) Translates to: GLSAAEAEGPLDDIA*MASKLRRRAPGDTA Trigger: GGCTGTATCTCCCGGTGCCCTGCGTCGGAGTTTGGAAGCCATCAAAGCGATGTCATCCAAAGGCCCCTCAGCCTCGGCAGCACTAAGTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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CDS TCA 72 bp | GCCCCTGCAAGGGCACTGGCCACATGTGGTGGGGTGTaGACACCATTGGTCTGTTCTGGAGGGTGTCTCACA | + |
Preference number: 6 (lower is better) Translates to: APARALATCGGV*TPLVCSGGCLT Trigger: TGTGAGACACCCTCCAGAACAGACCAATGGTGTTCACACCCCACCACATGTGGCCAGTGCCCTTGCAGGGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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CDS CAA 90 bp | GAAGCACCCCCGACAGCTACTGTCCCTGGAGACAAATTTCCACCATaGAGAATGGGAGAGCCATCTCCTCTGGCTGGGGAGAGGCTCCCT | + |
Preference number: 6 (lower is better) Translates to: EAPPTATVPGDKFPP*RMGEPSPLAGERLP Trigger: AGGGAGCCTCTCCCCAGCCAGAGGAGATGGCTCTCCCATTCTCAATGGTGGAAATTTGTCTCCAGGGACAGTAGCTGTCGGGGGTGCTTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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CDS CCA 72 bp | GGGCACTGGCCACATGTGGTGGGGTGTGAACACCATTaGTCTGTTCTGGAGGGTGTCTCACACTCCCTGCAA | + |
Preference number: 6 (lower is better) Translates to: GHWPHVVGCEHH*SVLEGVSHSLQ Trigger: TTGCAGGGAGTGTGAGACACCCTCCAGAACAGACCAATGGTGTTCACACCCCACCACATGTGGCCAGTGCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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CDS CCA 72 bp | AGATACAGCCCCTGCAAGGGCACTGGCCACATGTGGTaGGGTGTGAACACCATTGGTCTGTTCTGGAGGGTG | + |
Preference number: 6 (lower is better) Translates to: RYSPCKGTGHMW*GVNTIGLFWRV Trigger: CACCCTCCAGAACAGACCAATGGTGTTCACACCCCACCACATGTGGCCAGTGCCCTTGCAGGGGCTGTATCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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CDS CCA 72 bp | TACAAGGGTTTACCCACATTAAGGGACTGTGGAGGGTaGTGGCCCAGGCGCCGAGCAATCGGGGGTAAGGAA | + |
Preference number: 6 (lower is better) Translates to: YKGLPTLRDCGG*WPRRRAIGGKE Trigger: TTCCTTACCCCCGATTGCTCGGCGCCTGGGCCACCACCCTCCACAGTCCCTTAATGTGGGTAAACCCTTGTA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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CDS CCA 72 bp | ATCTATAACAATCTGAGACTGGCCACCTCGAGGGTGTaGACTGGGGCCAGAGATGTTCGGCTTGGACCACGC | + |
Preference number: 6 (lower is better) Translates to: IYNNLRLATSRV*TGARDVRLGPR Trigger: GCGTGGTCCAAGCCGAACATCTCTGGCCCCAGTCCACACCCTCGAGGTGGCCAGTCTCAGATTGTTATAGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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CDS CAA 72 bp | GGCCTTGTCCAGCCACCAAATAGCACTAGCAAGTCCTaGTACACGACCAGAGTGGCCCCAGCTTTGGGGGAA | + |
Preference number: 6 (lower is better) Translates to: GLVQPPNSTSKS*YTTRVAPALGE Trigger: TTCCCCCAAAGCTGGGGCCACTCTGGTCGTGTACAAGGACTTGCTAGTGCTATTTGGTGGCTGGACAAGGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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CDS CAA 72 bp | TGCATGTGCAGCAGCCAGGCATCTTTGAACAGCGCATaGGGACCGCCACACCCGCCAAGGATCAGAAGAGTT | + |
Preference number: 6 (lower is better) Translates to: CMCSSQASLNSA*GPPHPPRIRRV Trigger: AACTCTTCTGATCCTTGGCGGGTGTGGCGGTCCCAATGCGCTGTTCAAAGATGCCTGGCTGCTGCACATGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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CDS GCA 72 bp | CTACTTTTAGGTCGTAGCCGTCAGAGGCAGATGGAGTaGTTGGAGACACGACCTGTACGGGGCTGTCTAAGG | + |
Preference number: 6 (lower is better) Translates to: LLLGRSRQRQME*LETRPVRGCLR Trigger: CCTTAGACAGCCCCGTACAGGTCGTGTCTCCAAGCACTCCATCTGCCTCTGACGGCTACGACCTAAAAGTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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CDS CAA 72 bp | CCGACAGCTACTGTCCCTGGAGACAAATTTCCACCATaGAGAATGGGAGAGCCATCTCCTCTGGCTGGGGAG | + |
Preference number: 6 (lower is better) Translates to: PTATVPGDKFPP*RMGEPSPLAGE Trigger: CTCCCCAGCCAGAGGAGATGGCTCTCCCATTCTCAATGGTGGAAATTTGTCTCCAGGGACAGTAGCTGTCGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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CDS CAA 72 bp | CTTTTAGGTCGTAGCCGTCAGAGGCAGATGGAGTGCTaGGAGACACGACCTGTACGGGGCTGTCTAAGGAAG | + |
Preference number: 6 (lower is better) Translates to: LLGRSRQRQMEC*ETRPVRGCLRK Trigger: CTTCCTTAGACAGCCCCGTACAGGTCGTGTCTCCAAGCACTCCATCTGCCTCTGACGGCTACGACCTAAAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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CDS CAA 90 bp | GGGGTCCTCATCTTGCTCCATTGTCCCTTCCAGTGCAGTTTCTTCTaGGTCCACGGCCATGACACTGTCATCTTCACTGTCCGAGGAGCT | + |
Preference number: 6 (lower is better) Translates to: GVLILLHCPFQCSFF*VHGHDTVIFTVRGA Trigger: AGCTCCTCGGACAGTGAAGATGACAGTGTCATGGCCGTGGACCAAGAAGAAACTGCACTGGAAGGGACAATGGAGCAAGATGAGGACCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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CDS TCA 72 bp | CGACAGCTACTGTCCCTGGAGACAAATTTCCACCATTaGGAATGGGAGAGCCATCTCCTCTGGCTGGGGAGA | + |
Preference number: 6 (lower is better) Translates to: RQLLSLETNFHH*EWESHLLWLGR Trigger: TCTCCCCAGCCAGAGGAGATGGCTCTCCCATTCTCAATGGTGGAAATTTGTCTCCAGGGACAGTAGCTGTCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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CDS GCA 72 bp | TCCTCAACCTCCAACACTGGGTGGGGGTCCTCATCTTaGTCCATTGTCCCTTCCAGTGCAGTTTCTTCTTGG | + |
Preference number: 6 (lower is better) Translates to: SSTSNTGWGSSS*SIVPSSAVSSW Trigger: CCAAGAAGAAACTGCACTGGAAGGGACAATGGAGCAAGATGAGGACCCCCACCCAGTGTTGGAGGTTGAGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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CDS CAA 72 bp | CCTCTTCCGGCAGCTCAGACATGGACCTATTATGTCTaGTTTCCTCAACCTCCAACACTGGGTGGGGGTCCT | + |
Preference number: 6 (lower is better) Translates to: PLPAAQTWTYYV*FPQPPTLGGGP Trigger: AGGACCCCCACCCAGTGTTGGAGGTTGAGGAAACAAGACATAATAGGTCCATGTCTGAGCTGCCGGAAGAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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CDS CAA 90 bp | ATGTCTTGTTTCCTCAACCTCCAACACTGGGTGGGGGTCCTCATCTaGCTCCATTGTCCCTTCCAGTGCAGTTTCTTCTTGGTCCACGGC | + |
Preference number: 6 (lower is better) Translates to: MSCFLNLQHWVGVLI*LHCPFQCSFFLVHG Trigger: GCCGTGGACCAAGAAGAAACTGCACTGGAAGGGACAATGGAGCAAGATGAGGACCCCCACCCAGTGTTGGAGGTTGAGGAAACAAGACAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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CDS CAA 90 bp | GTCTCAGGAGGCCCGACCACCGAGCTGCTTGTGAACACTTTCCACTaGACTCGGCCCTTCTCCTTGGTGTCTTTAATGTCTAGCACATAC | + |
Preference number: 6 (lower is better) Translates to: VSGGPTTELLVNTFH*TRPFSLVSLMSSTY Trigger: GTATGTGCTAGACATTAAAGACACCAAGGAGAAGGGCCGAGTCAAGTGGAAAGTGTTCACAAGCAGCTCGGTGGTCGGGCCTCCTGAGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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CDS CAA 72 bp | TTCCTCAACCTCCAACACTGGGTGGGGGTCCTCATCTaGCTCCATTGTCCCTTCCAGTGCAGTTTCTTCTTG | + |
Preference number: 6 (lower is better) Translates to: FLNLQHWVGVLI*LHCPFQCSFFL Trigger: CAAGAAGAAACTGCACTGGAAGGGACAATGGAGCAAGATGAGGACCCCCACCCAGTGTTGGAGGTTGAGGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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CDS TCA 72 bp | CCAAGGATCAGAAGAGTTGTATCATCTATAACAATCTaGGACTGGCCACCTCGAGGGTGTGGACTGGGGCCA | + |
Preference number: 6 (lower is better) Translates to: PRIRRVVSSITI*DWPPRGCGLGP Trigger: TGGCCCCAGTCCACACCCTCGAGGTGGCCAGTCTCAGATTGTTATAGATGATACAACTCTTCTGATCCTTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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CDS CAA 72 bp | ATCTCTCTGGCTGGTGTAAGGGATAGGGACTTGGCCTaGTCCAGCCACCAAATAGCACTAGCAAGTCCTTGT | + |
Preference number: 6 (lower is better) Translates to: ISLAGVRDRDLA*SSHQIALASPC Trigger: ACAAGGACTTGCTAGTGCTATTTGGTGGCTGGACAAGGCCAAGTCCCTATCCCTTACACCAGCCAGAGAGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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CDS CAA 90 bp | CATCAAAGAATCTCTCTGGCTGGTGTAAGGGATAGGGACTTGGCCTaGTCCAGCCACCAAATAGCACTAGCAAGTCCTTGTACACGACCA | + |
Preference number: 6 (lower is better) Translates to: HQRISLAGVRDRDLA*SSHQIALASPCTRP Trigger: TGGTCGTGTACAAGGACTTGCTAGTGCTATTTGGTGGCTGGACAAGGCCAAGTCCCTATCCCTTACACCAGCCAGAGAGATTCTTTGATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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CDS GCA 72 bp | ACCATTGGTCTGTTCTGGAGGGTGTCTCACACTCCCTaGAACTGTCCTGTTGTCTATACTATCCACGTGACT | + |
Preference number: 6 (lower is better) Translates to: TIGLFWRVSHTP*NCPVVYTIHVT Trigger: AGTCACGTGGATAGTATAGACAACAGGACAGTTGCAGGGAGTGTGAGACACCCTCCAGAACAGACCAATGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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CDS CAA 72 bp | ATCTTGCTCCATTGTCCCTTCCAGTGCAGTTTCTTCTaGGTCCACGGCCATGACACTGTCATCTTCACTGTC | + |
Preference number: 6 (lower is better) Translates to: ILLHCPFQCSFF*VHGHDTVIFTV Trigger: GACAGTGAAGATGACAGTGTCATGGCCGTGGACCAAGAAGAAACTGCACTGGAAGGGACAATGGAGCAAGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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CDS CAA 72 bp | TGGTGGGCCACACCTTTGATAAGTCGATACCACTGTTaGCAGACCAGAGCTGCAGTCTTGTGTTCCTGGTAT | + |
Preference number: 6 (lower is better) Translates to: WWATPLISRYHC*QTRAAVLCSWY Trigger: ATACCAGGAACACAAGACTGCAGCTCTGGTCTGCAAACAGTGGTATCGACTTATCAAAGGTGTGGCCCACCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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CDS CAA 72 bp | CAAAGAATCTCTCTGGCTGGTGTAAGGGATAGGGACTaGGCCTTGTCCAGCCACCAAATAGCACTAGCAAGT | + |
Preference number: 6 (lower is better) Translates to: QRISLAGVRDRD*ALSSHQIALAS Trigger: ACTTGCTAGTGCTATTTGGTGGCTGGACAAGGCCAAGTCCCTATCCCTTACACCAGCCAGAGAGATTCTTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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CDS TCA 72 bp | CTCCCTGCAACTGTCCTGTTGTCTATACTATCCACGTaGCTACTACTGGAAGCAGACTTCAGGTCCCAATTC | + |
Preference number: 6 (lower is better) Translates to: LPATVLLSILST*LLLEADFRSQF Trigger: GAATTGGGACCTGAAGTCTGCTTCCAGTAGTAGTCACGTGGATAGTATAGACAACAGGACAGTTGCAGGGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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CDS CAA 90 bp | GAATTTCATCAAAGAATCTCTCTGGCTGGTGTAAGGGATAGGGACTaGGCCTTGTCCAGCCACCAAATAGCACTAGCAAGTCCTTGTACA | + |
Preference number: 6 (lower is better) Translates to: EFHQRISLAGVRDRD*ALSSHQIALASPCT Trigger: TGTACAAGGACTTGCTAGTGCTATTTGGTGGCTGGACAAGGCCAAGTCCCTATCCCTTACACCAGCCAGAGAGATTCTTTGATGAAATTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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CDS TCA 72 bp | CAATTCAGATCAATGGAACTTAACCTCAGGTCCTTCTaGTCTGGTAAAGACCCTCGTCGAGGAGCTAGAGAA | + |
Preference number: 6 (lower is better) Translates to: QFRSMELNLRSF*SGKDPRRGARE Trigger: TTCTCTAGCTCCTCGACGAGGGTCTTTACCAGATCAGAAGGACCTGAGGTTAAGTTCCATTGATCTGAATTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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CDS CCA 72 bp | CTGTCCTGTTGTCTATACTATCCACGTGACTACTACTaGAAGCAGACTTCAGGTCCCAATTCAGATCAATGG | + |
Preference number: 6 (lower is better) Translates to: LSCCLYYPRDYY*KQTSGPNSDQW Trigger: CCATTGATCTGAATTGGGACCTGAAGTCTGCTTCCAGTAGTAGTCACGTGGATAGTATAGACAACAGGACAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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CDS CCA 72 bp | TCTCTTTGCGCGCACAAAGTACAAGGCGTTTGTCTTTaGGTAGTACTTCACATTCTGCTTCTTGTCCATGAG | + |
Preference number: 6 (lower is better) Translates to: SLCAHKVQGVCL*VVLHILLLVHE Trigger: CTCATGGACAAGAAGCAGAATGTGAAGTACTACCCAAAGACAAACGCCTTGTACTTTGTGCGCGCAAAGAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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CDS TCA 72 bp | ATGCAGTTCCACCAGTTTTTAGACGGCGAGTACGTGTaGATTTCATCAAAGAATCTCTCTGGCTGGTGTAAG | + |
Preference number: 6 (lower is better) Translates to: MQFHQFLDGEYV*ISSKNLSGWCK Trigger: CTTACACCAGCCAGAGAGATTCTTTGATGAAATTCACACGTACTCGCCGTCTAAAAACTGGTGGAACTGCAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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CDS CCA 72 bp | TACTGGAAGCAGACTTCAGGTCCCAATTCAGATCAATaGAACTTAACCTCAGGTCCTTCTGATCTGGTAAAG | + |
Preference number: 6 (lower is better) Translates to: YWKQTSGPNSDQ*NLTSGPSDLVK Trigger: CTTTACCAGATCAGAAGGACCTGAGGTTAAGTTCCATTGATCTGAATTGGGACCTGAAGTCTGCTTCCAGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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CDS CAA 90 bp | TTCTCCTTGGTGTCTTTAATGTCTAGCACATACATCTGCATAGGTTaGCAGTTCATACTCTGGTACAAGGGTTTACCCACATTAAGGGAC | + |
Preference number: 6 (lower is better) Translates to: FSLVSLMSSTYICIG*QFILWYKGLPTLRD Trigger: GTCCCTTAATGTGGGTAAACCCTTGTACCAGAGTATGAACTGCAAACCTATGCAGATGTATGTGCTAGACATTAAAGACACCAAGGAGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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CDS GCA 72 bp | TTCTCCTTGGTGTCTTTAATGTCTAGCACATACATCTaGATAGGTTTGCAGTTCATACTCTGGTACAAGGGT | + |
Preference number: 6 (lower is better) Translates to: FSLVSLMSSTYI*IGLQFILWYKG Trigger: ACCCTTGTACCAGAGTATGAACTGCAAACCTATGCAGATGTATGTGCTAGACATTAAAGACACCAAGGAGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |
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CDS CAA 72 bp | GTGTCTTTAATGTCTAGCACATACATCTGCATAGGTTaGCAGTTCATACTCTGGTACAAGGGTTTACCCACA | + |
Preference number: 6 (lower is better) Translates to: VSLMSSTYICIG*QFILWYKGLPT Trigger: TGTGGGTAAACCCTTGTACCAGAGTATGAACTGCAAACCTATGCAGATGTATGTGCTAGACATTAAAGACAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030757.10 |