RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FBXO41 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000047013

Ensembl transcript IDs: ENSMUST00000159062.8, ENSMUST00000161078.8, ENSMUST00000161546.2

Found 538 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AAGCCCCATCTGGCTCCTGACCAGGAGATGGCCTGCCTGAGCAGCTaGGGAGGCCCTGGGTGGCTACTGCAGATCCTCTGCGCAGTGACA +
Preference number: 1 (lower is better)
Translates to: KPHLAPDQEMACLSS*GGPGWLLQILCAVT
Trigger: TGTCACTGCGCAGAGGATCTGCAGTAGCCACCCAGGGCCTCCTCAGCTGCTCAGGCAGGCCATCTCCTGGTCAGGAGCCAGATGGGGCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR TCA 90 bp GGGTCAGAATGCCTGGAACCAGCATCTTGGTCCTGCCTCCTGCCCTaGTGGCTGTGCAACCCTGTGCACCCAGGCATTCTAGTGCCTCCC +
Preference number: 1 (lower is better)
Translates to: GSECLEPASWSCLLP*WLCNPVHPGILVPP
Trigger: GGGAGGCACTAGAATGCCTGGGTGCACAGGGTTGCACAGCCATCAGGGCAGGAGGCAGGACCAAGATGCTGGTTCCAGGCATTCTGACCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR TCA 90 bp TGGCAGGGGATGGGAGTGGAAGAGATGGCAAGTGGCTGCCACCTGTaGGCCTTCTTCTCCATTGACCCAGTGCTTCTGGAGCAGGGCATG +
Preference number: 1 (lower is better)
Translates to: WQGMGVEEMASGCHL*AFFSIDPVLLEQGM
Trigger: CATGCCCTGCTCCAGAAGCACTGGGTCAATGGAGAAGAAGGCTCACAGGTGGCAGCCACTTGCCATCTCTTCCACTCCCATCCCCTGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR TCA 90 bp AGTCACAGGGAGCAGGAGCTACATGGATGCAGCTGGCAAAACAACTaGCCTACTAAAGGCAGCTGGGGCCCAAGTGCACCTCCACCTCCC +
Preference number: 1 (lower is better)
Translates to: SHREQELHGCSWQNN*PTKGSWGPSAPPPP
Trigger: GGGAGGTGGAGGTGCACTTGGGCCCCAGCTGCCTTTAGTAGGTCAGTTGTTTTGCCAGCTGCATCCATGTAGCTCCTGCTCCCTGTGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR TCA 90 bp GACGCAGAGGGCTTCCCTCTTCCCTTTGAGTGGCTGAAGAAAGGCTaGGGTGCTTCTAAGGAAGCCAGGCACCCACCCTATCCCCATTGG +
Preference number: 1 (lower is better)
Translates to: DAEGFPLPFEWLKKG*GASKEARHPPYPHW
Trigger: CCAATGGGGATAGGGTGGGTGCCTGGCTTCCTTAGAAGCACCTCAGCCTTTCTTCAGCCACTCAAAGGGAAGAGGGAAGCCCTCTGCGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR TCA 90 bp GGAAGAGATGGCAAGTGGCTGCCACCTGTGAGCCTTCTTCTCCATTaGCCCAGTGCTTCTGGAGCAGGGCATGCCCACGCGAGTTTTCTG +
Preference number: 1 (lower is better)
Translates to: GRDGKWLPPVSLLLH*PSASGAGHAHASFL
Trigger: CAGAAAACTCGCGTGGGCATGCCCTGCTCCAGAAGCACTGGGTCAATGGAGAAGAAGGCTCACAGGTGGCAGCCACTTGCCATCTCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR CCA 90 bp CCTACTAAAGGCAGCTGGGGCCCAAGTGCACCTCCACCTCCCTTCTaGGTCACAGAAGGAGAGGAAAGTTGTGCTGTTGCCTGTGACTCC +
Preference number: 1 (lower is better)
Translates to: PTKGSWGPSAPPPPF*VTEGEESCAVACDS
Trigger: GGAGTCACAGGCAACAGCACAACTTTCCTCTCCTTCTGTGACCCAGAAGGGAGGTGGAGGTGCACTTGGGCCCCAGCTGCCTTTAGTAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR CCA 90 bp CCCAATTTACACGTGCTGTTTGGCAGGGGATGGGAGTGGAAGAGATaGCAAGTGGCTGCCACCTGTGAGCCTTCTTCTCCATTGACCCAG +
Preference number: 1 (lower is better)
Translates to: PNLHVLFGRGWEWKR*QVAATCEPSSPLTQ
Trigger: CTGGGTCAATGGAGAAGAAGGCTCACAGGTGGCAGCCACTTGCCATCTCTTCCACTCCCATCCCCTGCCAAACAGCACGTGTAAATTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR GCA 90 bp GCTGTGGAAATTATTCCTCCGCCTCAGCACCAGGATCTGGCTCCTTaGCAAAGGCTTCTCAAGCCACTAGTTAGGTCAAGCAAGCTCCCC +
Preference number: 1 (lower is better)
Translates to: AVEIIPPPQHQDLAP*QRLLKPLVRSSKLP
Trigger: GGGGAGCTTGCTTGACCTAACTAGTGGCTTGAGAAGCCTTTGGCAAGGAGCCAGATCCTGGTGCTGAGGCGGAGGAATAATTTCCACAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR CCA 90 bp AAACCATGCCCCAATTTACACGTGCTGTTTGGCAGGGGATGGGAGTaGAAGAGATGGCAAGTGGCTGCCACCTGTGAGCCTTCTTCTCCA +
Preference number: 1 (lower is better)
Translates to: KPCPNLHVLFGRGWE*KRWQVAATCEPSSP
Trigger: TGGAGAAGAAGGCTCACAGGTGGCAGCCACTTGCCATCTCTTCCACTCCCATCCCCTGCCAAACAGCACGTGTAAATTGGGGCATGGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR TCA 90 bp AAGAAACCACAACTTGGAGACAGAGCTGCTGGCTCTCCGCATGCCTaGAGACTAAGATGCCCAAGACTCAGCCAGGACACAGTGACCTGT +
Preference number: 1 (lower is better)
Translates to: KKPQLGDRAAGSPHA*RLRCPRLSQDTVTC
Trigger: ACAGGTCACTGTGTCCTGGCTGAGTCTTGGGCATCTTAGTCTTCAGGCATGCGGAGAGCCAGCAGCTCTGTCTCCAAGTTGTGGTTTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR GCA 90 bp GCCCCCTTTGGAGAAAGCAAAGAAACCACAACTTGGAGACAGAGCTaGTGGCTCTCCGCATGCCTGAAGACTAAGATGCCCAAGACTCAG +
Preference number: 1 (lower is better)
Translates to: APFGESKETTTWRQS*WLSACLKTKMPKTQ
Trigger: CTGAGTCTTGGGCATCTTAGTCTTCAGGCATGCGGAGAGCCAGCAGCTCTGTCTCCAAGTTGTGGTTTCTTTGCTTTCTCCAAAGGGGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR CCA 90 bp GAAGCAGGGATGGCCCCCTTTGGAGAAAGCAAAGAAACCACAACTTaGAGACAGAGCTGCTGGCTCTCCGCATGCCTGAAGACTAAGATG +
Preference number: 1 (lower is better)
Translates to: EAGMAPFGESKETTT*RQSCWLSACLKTKM
Trigger: CATCTTAGTCTTCAGGCATGCGGAGAGCCAGCAGCTCTGTCTCCAAGTTGTGGTTTCTTTGCTTTCTCCAAAGGGGGCCATCCCTGCTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR CCA 90 bp ATGAAGTACTCAAGCCAAACCATGCCCCAATTTACACGTGCTGTTTaGCAGGGGATGGGAGTGGAAGAGATGGCAAGTGGCTGCCACCTG +
Preference number: 1 (lower is better)
Translates to: MKYSSQTMPQFTRAV*QGMGVEEMASGCHL
Trigger: CAGGTGGCAGCCACTTGCCATCTCTTCCACTCCCATCCCCTGCCAAACAGCACGTGTAAATTGGGGCATGGTTTGGCTTGAGTACTTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR CCA 90 bp TACACAGTAATATATACAGAGAGAGATGCTGGCCTGAGCCAAGGCTaGATGAGAAAGCAGGGCCACCAAGGGCAGCGAGACTGCCAAGTC +
Preference number: 1 (lower is better)
Translates to: YTVIYTERDAGLSQG*MRKQGHQGQRDCQV
Trigger: GACTTGGCAGTCTCGCTGCCCTTGGTGGCCCTGCTTTCTCATCCAGCCTTGGCTCAGGCCAGCATCTCTCTCTGTATATATTACTGTGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR CCA 90 bp GATGGGTTTGCACCCAGTCCAGGGTGTGGCACAGCTGGAGAAAACTaGCAAGAGGATCCCACCTTACAAAGGAGCAAAGAAAACCCTAAG +
Preference number: 1 (lower is better)
Translates to: DGFAPSPGCGTAGEN*QEDPTLQRSKENPK
Trigger: CTTAGGGTTTTCTTTGCTCCTTTGTAAGGTGGGATCCTCTTGCCAGTTTTCTCCAGCTGTGCCACACCCTGGACTGGGTGCAAACCCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR CCA 90 bp GCAACATACAGATGGGTTTGCACCCAGTCCAGGGTGTGGCACAGCTaGAGAAAACTGGCAAGAGGATCCCACCTTACAAAGGAGCAAAGA +
Preference number: 1 (lower is better)
Translates to: ATYRWVCTQSRVWHS*RKLARGSHLTKEQR
Trigger: TCTTTGCTCCTTTGTAAGGTGGGATCCTCTTGCCAGTTTTCTCCAGCTGTGCCACACCCTGGACTGGGTGCAAACCCATCTGTATGTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR CCA 90 bp CCCTTTGGAGAAAGCAAAGAAACCACAACTTGGAGACAGAGCTGCTaGCTCTCCGCATGCCTGAAGACTAAGATGCCCAAGACTCAGCCA +
Preference number: 1 (lower is better)
Translates to: PFGESKETTTWRQSC*LSACLKTKMPKTQP
Trigger: TGGCTGAGTCTTGGGCATCTTAGTCTTCAGGCATGCGGAGAGCCAGCAGCTCTGTCTCCAAGTTGTGGTTTCTTTGCTTTCTCCAAAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR CCA 90 bp AATACATACGATCAGATACATTCGGCAGAGGGCATCTGGGTGACATaGAGCAAAGTGCTGGGATGGCAATGCCTGGGTGGGGCAGAAAAG +
Preference number: 1 (lower is better)
Translates to: NTYDQIHSAEGIWVT*SKVLGWQCLGGAEK
Trigger: CTTTTCTGCCCCACCCAGGCATTGCCATCCCAGCACTTTGCTCCATGTCACCCAGATGCCCTCTGCCGAATGTATCTGATCGTATGTATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR GCA 90 bp AAACAGAAGCCCCTGCTGGCAGGCTTGGCCAGCTACATTACTTTGTaGTTTATCCAAGAGACAGGAAGGGCAGCACCTCTGGTCTTAAGA +
Preference number: 1 (lower is better)
Translates to: KQKPLLAGLASYITL*FIQETGRAAPLVLR
Trigger: TCTTAAGACCAGAGGTGCTGCCCTTCCTGTCTCTTGGATAAAGCACAAAGTAATGTAGCTGGCCAAGCCTGCCAGCAGGGGCTTCTGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR GCA 90 bp TTCCTTCAACATCGTGCCTTACAGAGACTGGGGTTGACAGCTTATTaGCTGTGTTCTGCATTCAAGATCAGGGCTGGTGACAGAGCAGCA +
Preference number: 1 (lower is better)
Translates to: FLQHRALQRLGLTAY*LCSAFKIRAGDRAA
Trigger: TGCTGCTCTGTCACCAGCCCTGATCTTGAATGCAGAACACAGGCAATAAGCTGTCAACCCCAGTCTCTGTAAGGCACGATGTTGAAGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR CCA 90 bp GAAAGCCTAACGGTCTGCTCTTCACCCAACCTTAAGCCTTGTCCTTaGGCAAGGACTACAGCTGAACTCACTTGTCCAGGTTATACACAC +
Preference number: 1 (lower is better)
Translates to: ESLTVCSSPNLKPCP*ARTTAELTCPGYTH
Trigger: GTGTGTATAACCTGGACAAGTGAGTTCAGCTGTAGTCCTTGCCCAAGGACAAGGCTTAAGGTTGGGTGAAGAGCAGACCGTTAGGCTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR CCA 90 bp ATCCTTTTAAATACATACGATCAGATACATTCGGCAGAGGGCATCTaGGTGACATGGAGCAAAGTGCTGGGATGGCAATGCCTGGGTGGG +
Preference number: 1 (lower is better)
Translates to: ILLNTYDQIHSAEGI*VTWSKVLGWQCLGG
Trigger: CCCACCCAGGCATTGCCATCCCAGCACTTTGCTCCATGTCACCCAGATGCCCTCTGCCGAATGTATCTGATCGTATGTATTTAAAAGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR GCA 90 bp CTTTGGCACCAGCTGTCAATTCTGGGAAGTTTTCCTTCAACATCGTaGCTTACAGAGACTGGGGTTGACAGCTTATTGCCTGTGTTCTGC +
Preference number: 1 (lower is better)
Translates to: LWHQLSILGSFPSTS*LTETGVDSLLPVFC
Trigger: GCAGAACACAGGCAATAAGCTGTCAACCCCAGTCTCTGTAAGGCACGATGTTGAAGGAAAACTTCCCAGAATTGACAGCTGGTGCCAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR CCA 90 bp CAAGAGGATCCCACCTTACAAAGGAGCAAAGAAAACCCTAAGATGTaGACGACAAACCAGGCGTTTGAAAGATCTGCCCAAATGAGGGCT +
Preference number: 1 (lower is better)
Translates to: QEDPTLQRSKENPKM*TTNQAFERSAQMRA
Trigger: AGCCCTCATTTGGGCAGATCTTTCAAACGCCTGGTTTGTCGTCCACATCTTAGGGTTTTCTTTGCTCCTTTGTAAGGTGGGATCCTCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR CCA 90 bp TCCAAGTTCACCAGGAACTATGTCTTTGGCACCAGCTGTCAATTCTaGGAAGTTTTCCTTCAACATCGTGCCTTACAGAGACTGGGGTTG +
Preference number: 1 (lower is better)
Translates to: SKFTRNYVFGTSCQF*EVFLQHRALQRLGL
Trigger: CAACCCCAGTCTCTGTAAGGCACGATGTTGAAGGAAAACTTCCCAGAATTGACAGCTGGTGCCAAAGACATAGTTCCTGGTGAACTTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR-3UTR CCA 90 bp GACAACCAGCAGCAGGTGTGTCAGCTCCTTGCTGGCTGTACCAGCAGGCCATTCCACTTGGTGTGGGGCTaGCAGGTGCCCTGCCGCCCC +
Preference number: 2 (lower is better)
Translates to: DNQQQVCQLLAGCTSRPFHLVWG*QVPCRP
Trigger: GGGGCGGCAGGGCACCTGCCAGCCCCACACCAAGTG...GAATGGCCTGCTGGTACAGCCAGCAAGGAGCTGACACACCTGCTGCTGGTTGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR-3UTR CCA 90 bp CCAAGGCTGGATGAGAAAGCAGGGCCACCAAGGGCAGCGAGACTGCCAAGTCATCACTTGGTGTGGGGCTaGCAGGTGCCCTGCCGCCCC +
Preference number: 2 (lower is better)
Translates to: PRLDEKAGPPRAARLPSHHLVWG*QVPCRP
Trigger: GGGGCGGCAGGGCACCTGCCAGCCCCACACCAAGTG...ATGACTTGGCAGTCTCGCTGCCCTTGGTGGCCCTGCTTTCTCATCCAGCCTTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR-3UTR GCA 90 bp CCCTGTCCGTGGGTCAGAATGCCTGGAACCAGCATCTTGGTCCTGCCTCCTGCCCAGCTGGGGCCCAAGTaGACCTCCACCTCCCTTCTG +
Preference number: 2 (lower is better)
Translates to: PCPWVRMPGTSILVLPPAQLGPK*TSTSLL
Trigger: CAGAAGGGAGGTGGAGGTGCACTTGGGCCCCAGCTG...GGCAGGAGGCAGGACCAAGATGCTGGTTCCAGGCATTCTGACCCACGGACAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR-3UTR TCA 90 bp CCAAGGCTGGATGAGAAAGCAGGGCCACCAAGGGCAGCGAGACTGCCAAGTCATAGGAGATGGCCTGCCTaGGCAGCTGAGGAGGCCCTG +
Preference number: 2 (lower is better)
Translates to: PRLDEKAGPPRAARLPSHRRWPA*AAEEAL
Trigger: CAGGGCCTCCTCAGCTGCTCAGGCAGGCCATCTCCT...ATGACTTGGCAGTCTCGCTGCCCTTGGTGGCCCTGCTTTCTCATCCAGCCTTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR-3UTR GCA 90 bp CCCTGTCCGTGGGTCAGAATGCCTGGAACCAGCATCTTGGTCCTGCCTCCTGCCGTCCCGGGGAGGCAGTaGTCTGAGTCACCTGTCACT +
Preference number: 2 (lower is better)
Translates to: PCPWVRMPGTSILVLPPAVPGRQ*SESPVT
Trigger: AGTGACAGGTGACTCAGAGCACTGCCTCCCCGGGAC...GGCAGGAGGCAGGACCAAGATGCTGGTTCCAGGCATTCTGACCCACGGACAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR-3UTR GCA 90 bp CCCTGTCCGTGGGTCAGAATGCCTGGAACCAGCATCTTGGTCCTGCCTCCTGCCGGTGTGTCAGCTCCTTaGTGGCTGTACCAGCAGGCC +
Preference number: 2 (lower is better)
Translates to: PCPWVRMPGTSILVLPPAGVSAP*WLYQQA
Trigger: GGCCTGCTGGTACAGCCAGCAAGGAGCTGACACACC...GGCAGGAGGCAGGACCAAGATGCTGGTTCCAGGCATTCTGACCCACGGACAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR-3UTR CCA 90 bp CAGGGCTGTGATAATGGCAGAGGTCCAGAGCTGGCCTCCTGGTGGGGTACCTGCGGCTGCCAAGACTCATaGCCTCGGCCACTCCACGTT +
Preference number: 2 (lower is better)
Translates to: QGCDNGRGPELASWWGTCGCQDS*PRPLHV
Trigger: AACGTGGAGTGGCCGAGGCCATGAGTCTTGGCAGCC...GCAGGTACCCCACCAGGAGGCCAGCTCTGGACCTCTGCCATTATCACAGCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR-3UTR CCA 90 bp CAGGGCTGTGATAATGGCAGAGGTCCAGAGCTGGCCTCCTGGTGGGGTACCTGCTTGACCCAGTGCTTCTaGAGCAGGGCATGCCCACGC +
Preference number: 2 (lower is better)
Translates to: QGCDNGRGPELASWWGTCLTQCF*SRACPR
Trigger: GCGTGGGCATGCCCTGCTCCAGAAGCACTGGGTCAA...GCAGGTACCCCACCAGGAGGCCAGCTCTGGACCTCTGCCATTATCACAGCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR-3UTR TCA 90 bp CATGCCCCAATTTACACGTGCTGTTTGGCAGGGGATGGGAGTGGAAGAGATGGCAGGAGATGGCCTGCCTaGGCAGCTGAGGAGGCCCTG +
Preference number: 2 (lower is better)
Translates to: HAPIYTCCLAGDGSGRDGRRWPA*AAEEAL
Trigger: CAGGGCCTCCTCAGCTGCTCAGGCAGGCCATCTCCT...GCCATCTCTTCCACTCCCATCCCCTGCCAAACAGCACGTGTAAATTGGGGCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR-3UTR TCA 90 bp ATACAGATGGGTTTGCACCCAGTCCAGGGTGTGGCACAGCTGGAGAAAACTGGCGCCCCATCTGGCTCCTaGCCAGGAGATGGCCTGCCT +
Preference number: 2 (lower is better)
Translates to: IQMGLHPVQGVAQLEKTGAPSGS*PGDGLP
Trigger: AGGCAGGCCATCTCCTGGTCAGGAGCCAGATGGGGC...GCCAGTTTTCTCCAGCTGTGCCACACCCTGGACTGGGTGCAAACCCATCTGTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR-3UTR TCA 90 bp TCCGCATGCCTGAAGACTAAGATGCCCAAGACTCAGCCAGGACACAGTGACCTGGCCCCATCTGGCTCCTaGCCAGGAGATGGCCTGCCT +
Preference number: 2 (lower is better)
Translates to: SACLKTKMPKTQPGHSDLAPSGS*PGDGLP
Trigger: AGGCAGGCCATCTCCTGGTCAGGAGCCAGATGGGGC...CAGGTCACTGTGTCCTGGCTGAGTCTTGGGCATCTTAGTCTTCAGGCATGCGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR-3UTR TCA 90 bp CAGGGCTGTGATAATGGCAGAGGTCCAGAGCTGGCCTCCTGGTGGGGTACCTGCTTGTGCTGTTGCCTGTaGCTCCTTGGGGACAAGGCT +
Preference number: 2 (lower is better)
Translates to: QGCDNGRGPELASWWGTCLCCCL*LLGDKA
Trigger: AGCCTTGTCCCCAAGGAGTCACAGGCAACAGCACAA...GCAGGTACCCCACCAGGAGGCCAGCTCTGGACCTCTGCCATTATCACAGCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR-3UTR TCA 90 bp ATGAGAAAGCAGGGCCACCAAGGGCAGCGAGACTGCCAAGTCATCAAGCTGGTGTCCTGCCTCCTGCCCTaGTGGCTGTGCAACCCTGTG +
Preference number: 2 (lower is better)
Translates to: MRKQGHQGQRDCQVIKLVSCLLP*WLCNPV
Trigger: CACAGGGTTGCACAGCCATCAGGGCAGGAGGCAGGA...CACCAGCTTGATGACTTGGCAGTCTCGCTGCCCTTGGTGGCCCTGCTTTCTCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR-3UTR TCA 90 bp CAGGGCTGTGATAATGGCAGAGGTCCAGAGCTGGCCTCCTGGTGGGGTACCTGCAGTGGCTGCCACCTGTaGGCCTTCTTCTCCATTGAC +
Preference number: 2 (lower is better)
Translates to: QGCDNGRGPELASWWGTCSGCHL*AFFSID
Trigger: GTCAATGGAGAAGAAGGCTCACAGGTGGCAGCCACT...GCAGGTACCCCACCAGGAGGCCAGCTCTGGACCTCTGCCATTATCACAGCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR-3UTR GCA 90 bp CAGGGCTGTGATAATGGCAGAGGTCCAGAGCTGGCCTCCTGGTGGGGTACCTGCGCCCCAATTTACACGTaGTGTTTGGCAGGGGATGGG +
Preference number: 2 (lower is better)
Translates to: QGCDNGRGPELASWWGTCAPIYT*CLAGDG
Trigger: CCCATCCCCTGCCAAACAGCACGTGTAAATTGGGGC...GCAGGTACCCCACCAGGAGGCCAGCTCTGGACCTCTGCCATTATCACAGCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR-3UTR CCA 90 bp CAGCAATGGAAGGGACTTGTGTGGCAGCAACATACAGATGGGTTTGCACCCAGTCACTTGGTGTGGGGCTaGCAGGTGCCCTGCCGCCCC +
Preference number: 2 (lower is better)
Translates to: QQWKGLVWQQHTDGFAPSHLVWG*QVPCRP
Trigger: GGGGCGGCAGGGCACCTGCCAGCCCCACACCAAGTG...ACTGGGTGCAAACCCATCTGTATGTTGCTGCCACACAAGTCCCTTCCATTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR-3UTR CCA 90 bp GCCTGTGTTCTGCATTCAAGATCAGGGCTGGTGACAGAGCAGCAGGCCTTGGGACCTTGGGGACAAGGCTaGGGAGGTGGGAGTAACGGG +
Preference number: 2 (lower is better)
Translates to: ACVLHSRSGLVTEQQALGPWGQG*GGGSNG
Trigger: CCCGTTACTCCCACCTCCCCAGCCTTGTCCCCAAGG...TCCCAAGGCCTGCTGCTCTGTCACCAGCCCTGATCTTGAATGCAGAACACAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR-3UTR CCA 90 bp CAGGGCTGTGATAATGGCAGAGGTCCAGAGCTGGCCTCCTGGTGGGGTACCTGCCCTCCACCTCCCTTCTaGGTCACAGAAGGAGAGGAA +
Preference number: 2 (lower is better)
Translates to: QGCDNGRGPELASWWGTCPPPPF*VTEGEE
Trigger: TTCCTCTCCTTCTGTGACCCAGAAGGGAGGTGGAGG...GCAGGTACCCCACCAGGAGGCCAGCTCTGGACCTCTGCCATTATCACAGCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR-3UTR TCA 90 bp CCACGTTCTGAGCAGAGGAATTCGGTTAGGTGTGCTCAGCCAGTGGGGCTTTGGTTCCAGCTGGGGATGTaGGGGGAGAGGTGTCTCAGG +
Preference number: 2 (lower is better)
Translates to: PRSEQRNSVRCAQPVGLWFQLGM*GERCLR
Trigger: CCTGAGACACCTCTCCCCTCACATCCCCAGCTGGAA...CCAAAGCCCCACTGGCTGAGCACACCTAACCGAATTCCTCTGCTCAGAACGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR-3UTR TCA 90 bp GCCTGTGTTCTGCATTCAAGATCAGGGCTGGTGACAGAGCAGCAGGCCTTGGGATTCCAGCTGGGGATGTaGGGGGAGAGGTGTCTCAGG +
Preference number: 2 (lower is better)
Translates to: ACVLHSRSGLVTEQQALGFQLGM*GERCLR
Trigger: CCTGAGACACCTCTCCCCTCACATCCCCAGCTGGAA...TCCCAAGGCCTGCTGCTCTGTCACCAGCCCTGATCTTGAATGCAGAACACAGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR-3UTR TCA 90 bp GAGCAAGCCACGCAACTCAGCGATGATGATAAACTGGGACAGGGCTATAGGATCGCCTGCCTGAGCAGCTaGGGAGGCCCTGGGTGGCTA +
Preference number: 2 (lower is better)
Translates to: EQATQLSDDDKLGQGYRIACLSS*GGPGWL
Trigger: TAGCCACCCAGGGCCTCCTCAGCTGCTCAGGCAGGC...GATCCTATAGCCCTGTCCCAGTTTATCATCATCGCTGAGTTGCGTGGCTTGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR-3UTR TCA 90 bp TCCGCATGCCTGAAGACTAAGATGCCCAAGACTCAGCCAGGACACAGTGACCTGTCCTGCCTCCTGCCCTaGTGGCTGTGCAACCCTGTG +
Preference number: 2 (lower is better)
Translates to: SACLKTKMPKTQPGHSDLSCLLP*WLCNPV
Trigger: CACAGGGTTGCACAGCCATCAGGGCAGGAGGCAGGA...CAGGTCACTGTGTCCTGGCTGAGTCTTGGGCATCTTAGTCTTCAGGCATGCGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR-3UTR TCA 90 bp CAGGGCTGTGATAATGGCAGAGGTCCAGAGCTGGCCTCCTGGTGGGGTACCTGCCTTCCCTCTTCCCTTTaGGTGGCTGAAGAAAGGCTG +
Preference number: 2 (lower is better)
Translates to: QGCDNGRGPELASWWGTCLPSSL*VAEERL
Trigger: CAGCCTTTCTTCAGCCACTCAAAGGGAAGAGGGAAG...GCAGGTACCCCACCAGGAGGCCAGCTCTGGACCTCTGCCATTATCACAGCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR-3UTR GCA 90 bp GCCTGTGTTCTGCATTCAAGATCAGGGCTGGTGACAGAGCAGCAGGCCTTGGGAGTCCCGGGGAGGCAGTaGTCTGAGTCACCTGTCACT +
Preference number: 2 (lower is better)
Translates to: ACVLHSRSGLVTEQQALGVPGRQ*SESPVT
Trigger: AGTGACAGGTGACTCAGAGCACTGCCTCCCCGGGAC...TCCCAAGGCCTGCTGCTCTGTCACCAGCCCTGATCTTGAATGCAGAACACAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR-3UTR GCA 90 bp ATGAGAAAGCAGGGCCACCAAGGGCAGCGAGACTGCCAAGTCATCAAGCTGGTGGGTGTGTCAGCTCCTTaGTGGCTGTACCAGCAGGCC +
Preference number: 2 (lower is better)
Translates to: MRKQGHQGQRDCQVIKLVGVSAP*WLYQQA
Trigger: GGCCTGCTGGTACAGCCAGCAAGGAGCTGACACACC...CACCAGCTTGATGACTTGGCAGTCTCGCTGCCCTTGGTGGCCCTGCTTTCTCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR-3UTR GCA 90 bp CAGGGCTGTGATAATGGCAGAGGTCCAGAGCTGGCCTCCTGGTGGGGTACCTGCCAGGATCTGGCTCCTTaGCAAAGGCTTCTCAAGCCA +
Preference number: 2 (lower is better)
Translates to: QGCDNGRGPELASWWGTCQDLAP*QRLLKP
Trigger: TGGCTTGAGAAGCCTTTGGCAAGGAGCCAGATCCTG...GCAGGTACCCCACCAGGAGGCCAGCTCTGGACCTCTGCCATTATCACAGCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR-3UTR GCA 90 bp TCCGCATGCCTGAAGACTAAGATGCCCAAGACTCAGCCAGGACACAGTGACCTGCAGCTGGGGCCCAAGTaGACCTCCACCTCCCTTCTG +
Preference number: 2 (lower is better)
Translates to: SACLKTKMPKTQPGHSDLQLGPK*TSTSLL
Trigger: CAGAAGGGAGGTGGAGGTGCACTTGGGCCCCAGCTG...CAGGTCACTGTGTCCTGGCTGAGTCTTGGGCATCTTAGTCTTCAGGCATGCGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR-3UTR CCA 90 bp ATGAGAAAGCAGGGCCACCAAGGGCAGCGAGACTGCCAAGTCATCAAGCTGGTGAAAGAGCACTTGGTGTaGGGCTGGCAGGTGCCCTGC +
Preference number: 2 (lower is better)
Translates to: MRKQGHQGQRDCQVIKLVKEHLV*GWQVPC
Trigger: GCAGGGCACCTGCCAGCCCCACACCAAGTGCTCTTT...CACCAGCTTGATGACTTGGCAGTCTCGCTGCCCTTGGTGGCCCTGCTTTCTCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR-3UTR CCA 90 bp CCACGTTCTGAGCAGAGGAATTCGGTTAGGTGTGCTCAGCCAGTGGGGCTTTGGGCAGGCCATTCCAGCTaGGGATGTGAGGGGAGAGGT +
Preference number: 2 (lower is better)
Translates to: PRSEQRNSVRCAQPVGLWAGHSS*GCEGRG
Trigger: ACCTCTCCCCTCACATCCCCAGCTGGAATGGCCTGC...CCAAAGCCCCACTGGCTGAGCACACCTAACCGAATTCCTCTGCTCAGAACGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR-3UTR CCA 90 bp CCACGTTCTGAGCAGAGGAATTCGGTTAGGTGTGCTCAGCCAGTGGGGCTTTGGCAGCTGAGGAGGCCCTaGGTGGCTACTGCAGATCCT +
Preference number: 2 (lower is better)
Translates to: PRSEQRNSVRCAQPVGLWQLRRP*VATADP
Trigger: AGGATCTGCAGTAGCCACCCAGGGCCTCCTCAGCTG...CCAAAGCCCCACTGGCTGAGCACACCTAACCGAATTCCTCTGCTCAGAACGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR-3UTR CCA 90 bp ATGAGAAAGCAGGGCCACCAAGGGCAGCGAGACTGCCAAGTCATCAAGCTGGTGGGCTGCCAAGACTCATaGCCTCGGCCACTCCACGTT +
Preference number: 2 (lower is better)
Translates to: MRKQGHQGQRDCQVIKLVGCQDS*PRPLHV
Trigger: AACGTGGAGTGGCCGAGGCCATGAGTCTTGGCAGCC...CACCAGCTTGATGACTTGGCAGTCTCGCTGCCCTTGGTGGCCCTGCTTTCTCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR-3UTR CCA 90 bp CAGGGCTGTGATAATGGCAGAGGTCCAGAGCTGGCCTCCTGGTGGGGTACCTGCCCACCCTATCCCCATTaGCTCTGTGACTGCTCAAGA +
Preference number: 2 (lower is better)
Translates to: QGCDNGRGPELASWWGTCPPYPH*LCDCSR
Trigger: TCTTGAGCAGTCACAGAGCCAATGGGGATAGGGTGG...GCAGGTACCCCACCAGGAGGCCAGCTCTGGACCTCTGCCATTATCACAGCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR-3UTR CCA 90 bp CAGGGCTGTGATAATGGCAGAGGTCCAGAGCTGGCCTCCTGGTGGGGTACCTGCTACAGAGAGAGATGCTaGCCTGAGCCAAGGCTGGAT +
Preference number: 2 (lower is better)
Translates to: QGCDNGRGPELASWWGTCYRERC*PEPRLD
Trigger: ATCCAGCCTTGGCTCAGGCCAGCATCTCTCTCTGTA...GCAGGTACCCCACCAGGAGGCCAGCTCTGGACCTCTGCCATTATCACAGCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR-3UTR TCA 90 bp GAGCAAGCCACGCAACTCAGCGATGATGATAAACTGGGACAGGGCTATAGGATCAGGAGATGGCCTGCCTaGGCAGCTGAGGAGGCCCTG +
Preference number: 2 (lower is better)
Translates to: EQATQLSDDDKLGQGYRIRRWPA*AAEEAL
Trigger: CAGGGCCTCCTCAGCTGCTCAGGCAGGCCATCTCCT...GATCCTATAGCCCTGTCCCAGTTTATCATCATCGCTGAGTTGCGTGGCTTGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR-3UTR TCA 90 bp ACAGAGCAAGCCACGCAACTCAGCGATGATGATAAACTGGGACAGGGCTATAGGGCCCCATCTGGCTCCTaGCCAGGAGATGGCCTGCCT +
Preference number: 2 (lower is better)
Translates to: TEQATQLSDDDKLGQGYRAPSGS*PGDGLP
Trigger: AGGCAGGCCATCTCCTGGTCAGGAGCCAGATGGGGC...CCTATAGCCCTGTCCCAGTTTATCATCATCGCTGAGTTGCGTGGCTTGCTCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR-3UTR GCA 90 bp ATGAGAAAGCAGGGCCACCAAGGGCAGCGAGACTGCCAAGTCATCAAGCTGGTGACTTGGAGACAGAGCTaGTGGCTCTCCGCATGCCTG +
Preference number: 2 (lower is better)
Translates to: MRKQGHQGQRDCQVIKLVTWRQS*WLSACL
Trigger: CAGGCATGCGGAGAGCCAGCAGCTCTGTCTCCAAGT...CACCAGCTTGATGACTTGGCAGTCTCGCTGCCCTTGGTGGCCCTGCTTTCTCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR-3UTR GCA 90 bp CAGGGCTGTGATAATGGCAGAGGTCCAGAGCTGGCCTCCTGGTGGGGTACCTGCATATACAGAGAGAGATaGTGGCCTGAGCCAAGGCTG +
Preference number: 2 (lower is better)
Translates to: QGCDNGRGPELASWWGTCIYRER*WPEPRL
Trigger: CAGCCTTGGCTCAGGCCAGCATCTCTCTCTGTATAT...GCAGGTACCCCACCAGGAGGCCAGCTCTGGACCTCTGCCATTATCACAGCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR-3UTR CCA 90 bp TCCGCATGCCTGAAGACTAAGATGCCCAAGACTCAGCCAGGACACAGTGACCTGGGCTGCCAAGACTCATaGCCTCGGCCACTCCACGTT +
Preference number: 2 (lower is better)
Translates to: SACLKTKMPKTQPGHSDLGCQDS*PRPLHV
Trigger: AACGTGGAGTGGCCGAGGCCATGAGTCTTGGCAGCC...CAGGTCACTGTGTCCTGGCTGAGTCTTGGGCATCTTAGTCTTCAGGCATGCGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR-3UTR CCA 90 bp ATGAGAAAGCAGGGCCACCAAGGGCAGCGAGACTGCCAAGTCATCAAGCTGGTGTTGCCTGTGACTCCTTaGGGACAAGGCTGGGGAGGT +
Preference number: 2 (lower is better)
Translates to: MRKQGHQGQRDCQVIKLVLPVTP*GQGWGG
Trigger: ACCTCCCCAGCCTTGTCCCCAAGGAGTCACAGGCAA...CACCAGCTTGATGACTTGGCAGTCTCGCTGCCCTTGGTGGCCCTGCTTTCTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR-3UTR CCA 90 bp CAGGGCTGTGATAATGGCAGAGGTCCAGAGCTGGCCTCCTGGTGGGGTACCTGCAGGGATGGCCCCCTTTaGAGAAAGCAAAGAAACCAC +
Preference number: 2 (lower is better)
Translates to: QGCDNGRGPELASWWGTCRDGPL*RKQRNH
Trigger: GTGGTTTCTTTGCTTTCTCCAAAGGGGGCCATCCCT...GCAGGTACCCCACCAGGAGGCCAGCTCTGGACCTCTGCCATTATCACAGCCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR-3UTR CCA 90 bp CAGGGCTGTGATAATGGCAGAGGTCCAGAGCTGGCCTCCTGGTGGGGTACCTGCTTTACACGTGCTGTTTaGCAGGGGATGGGAGTGGAA +
Preference number: 2 (lower is better)
Translates to: QGCDNGRGPELASWWGTCFTRAV*QGMGVE
Trigger: TTCCACTCCCATCCCCTGCCAAACAGCACGTGTAAA...GCAGGTACCCCACCAGGAGGCCAGCTCTGGACCTCTGCCATTATCACAGCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR-3UTR TCA 90 bp CATGCCCCAATTTACACGTGCTGTTTGGCAGGGGATGGGAGTGGAAGAGATGGCAGATCCTCTGCGCAGTaGCAACCAGCAGCAGGTGTG +
Preference number: 2 (lower is better)
Translates to: HAPIYTCCLAGDGSGRDGRSSAQ*QPAAGV
Trigger: CACACCTGCTGCTGGTTGTCACTGCGCAGAGGATCT...GCCATCTCTTCCACTCCCATCCCCTGCCAAACAGCACGTGTAAATTGGGGCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR-3UTR TCA 90 bp CTGGGAAGTTTTCCTTCAACATCGTGCCTTACAGAGACTGGGGTTGACAGCTTAGCCTGCCTGAGCAGCTaGGGAGGCCCTGGGTGGCTA +
Preference number: 2 (lower is better)
Translates to: LGSFPSTSCLTETGVDSLACLSS*GGPGWL
Trigger: TAGCCACCCAGGGCCTCCTCAGCTGCTCAGGCAGGC...TAAGCTGTCAACCCCAGTCTCTGTAAGGCACGATGTTGAAGGAAAACTTCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR-3UTR TCA 90 bp GCCTGTGTTCTGCATTCAAGATCAGGGCTGGTGACAGAGCAGCAGGCCTTGGGATTGTGCTGTTGCCTGTaGCTCCTTGGGGACAAGGCT +
Preference number: 2 (lower is better)
Translates to: ACVLHSRSGLVTEQQALGLCCCL*LLGDKA
Trigger: AGCCTTGTCCCCAAGGAGTCACAGGCAACAGCACAA...TCCCAAGGCCTGCTGCTCTGTCACCAGCCCTGATCTTGAATGCAGAACACAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR-3UTR GCA 90 bp CCAAGGCTGGATGAGAAAGCAGGGCCACCAAGGGCAGCGAGACTGCCAAGTCATTTGCCACGTCTGAGCTaGTTTAAGCCCCATCTGGCT +
Preference number: 2 (lower is better)
Translates to: PRLDEKAGPPRAARLPSHLPRLS*FKPHLA
Trigger: AGCCAGATGGGGCTTAAAGCAGCTCAGACGTGGCAA...ATGACTTGGCAGTCTCGCTGCCCTTGGTGGCCCTGCTTTCTCATCCAGCCTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR-3UTR GCA 90 bp GGAGAGGAAAGTTGTGCTGTTGCCTGTGACTCCTTGGGGACAAGGCTGGGGAGGCAGGATCTGGCTCCTTaGCAAAGGCTTCTCAAGCCA +
Preference number: 2 (lower is better)
Translates to: GEESCAVACDSLGTRLGRQDLAP*QRLLKP
Trigger: TGGCTTGAGAAGCCTTTGGCAAGGAGCCAGATCCTG...CCTCCCCAGCCTTGTCCCCAAGGAGTCACAGGCAACAGCACAACTTTCCTCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR-3UTR CCA 90 bp GCCTGTGTTCTGCATTCAAGATCAGGGCTGGTGACAGAGCAGCAGGCCTTGGGAGTGTCAGCTCCTTGCTaGCTGTACCAGCAGGCCATT +
Preference number: 2 (lower is better)
Translates to: ACVLHSRSGLVTEQQALGVSAPC*LYQQAI
Trigger: AATGGCCTGCTGGTACAGCCAGCAAGGAGCTGACAC...TCCCAAGGCCTGCTGCTCTGTCACCAGCCCTGATCTTGAATGCAGAACACAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR-3UTR CCA 90 bp ATGAGAAAGCAGGGCCACCAAGGGCAGCGAGACTGCCAAGTCATCAAGCTGGTGGCTTTAAGCCCCATCTaGCTCCTGACCAGGAGATGG +
Preference number: 2 (lower is better)
Translates to: MRKQGHQGQRDCQVIKLVALSPI*LLTRRW
Trigger: CCATCTCCTGGTCAGGAGCCAGATGGGGCTTAAAGC...CACCAGCTTGATGACTTGGCAGTCTCGCTGCCCTTGGTGGCCCTGCTTTCTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR-3UTR CCA 90 bp CCACGTTCTGAGCAGAGGAATTCGGTTAGGTGTGCTCAGCCAGTGGGGCTTTGGCTCAGCACCAGGATCTaGCTCCTTGCCAAAGGCTTC +
Preference number: 2 (lower is better)
Translates to: PRSEQRNSVRCAQPVGLWLSTRI*LLAKGF
Trigger: GAAGCCTTTGGCAAGGAGCCAGATCCTGGTGCTGAG...CCAAAGCCCCACTGGCTGAGCACACCTAACCGAATTCCTCTGCTCAGAACGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR-3UTR CCA 90 bp CAGGGCTGTGATAATGGCAGAGGTCCAGAGCTGGCCTCCTGGTGGGGTACCTGCACAGCTGGAGAAAACTaGCAAGAGGATCCCACCTTA +
Preference number: 2 (lower is better)
Translates to: QGCDNGRGPELASWWGTCTAGEN*QEDPTL
Trigger: TAAGGTGGGATCCTCTTGCCAGTTTTCTCCAGCTGT...GCAGGTACCCCACCAGGAGGCCAGCTCTGGACCTCTGCCATTATCACAGCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR-3UTR CCA 90 bp CCAAGGCTGGATGAGAAAGCAGGGCCACCAAGGGCAGCGAGACTGCCAAGTCATCTGTTTGGCAGGGGATaGGAGTGGAAGAGATGGCAA +
Preference number: 2 (lower is better)
Translates to: PRLDEKAGPPRAARLPSHLFGRG*EWKRWQ
Trigger: TTGCCATCTCTTCCACTCCCATCCCCTGCCAAACAG...ATGACTTGGCAGTCTCGCTGCCCTTGGTGGCCCTGCTTTCTCATCCAGCCTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR-3UTR TCA 90 bp CCAAGGCTGGATGAGAAAGCAGGGCCACCAAGGGCAGCGAGACTGCCAAGTCATTGGAGTATCCAGCACTaGCAGCCTTGGCATTTCAGT +
Preference number: 2 (lower is better)
Translates to: PRLDEKAGPPRAARLPSHWSIQH*QPWHFS
Trigger: ACTGAAATGCCAAGGCTGTCAGTGCTGGATACTCCA...ATGACTTGGCAGTCTCGCTGCCCTTGGTGGCCCTGCTTTCTCATCCAGCCTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR-3UTR TCA 90 bp GCCTGTGTTCTGCATTCAAGATCAGGGCTGGTGACAGAGCAGCAGGCCTTGGGAAGCCTTCTTCTCCATTaGCCCAGTGCTTCTGGAGCA +
Preference number: 2 (lower is better)
Translates to: ACVLHSRSGLVTEQQALGSLLLH*PSASGA
Trigger: TGCTCCAGAAGCACTGGGTCAATGGAGAAGAAGGCT...TCCCAAGGCCTGCTGCTCTGTCACCAGCCCTGATCTTGAATGCAGAACACAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR-3UTR GCA 90 bp GCCTGTGTTCTGCATTCAAGATCAGGGCTGGTGACAGAGCAGCAGGCCTTGGGATTGCCACGTCTGAGCTaGTTTAAGCCCCATCTGGCT +
Preference number: 2 (lower is better)
Translates to: ACVLHSRSGLVTEQQALGLPRLS*FKPHLA
Trigger: AGCCAGATGGGGCTTAAAGCAGCTCAGACGTGGCAA...TCCCAAGGCCTGCTGCTCTGTCACCAGCCCTGATCTTGAATGCAGAACACAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR-3UTR GCA 90 bp GGAGAGGAAAGTTGTGCTGTTGCCTGTGACTCCTTGGGGACAAGGCTGGGGAGGTCACCCTTATGGCCCTaGCTCAACTTTCAGCTAACC +
Preference number: 2 (lower is better)
Translates to: GEESCAVACDSLGTRLGRSPLWP*LNFQLT
Trigger: GGTTAGCTGAAAGTTGAGGCAGGGCCATAAGGGTGA...CCTCCCCAGCCTTGTCCCCAAGGAGTCACAGGCAACAGCACAACTTTCCTCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR-3UTR GCA 90 bp ATGAGAAAGCAGGGCCACCAAGGGCAGCGAGACTGCCAAGTCATCAAGCTGGTGCAGGATCTGGCTCCTTaGCAAAGGCTTCTCAAGCCA +
Preference number: 2 (lower is better)
Translates to: MRKQGHQGQRDCQVIKLVQDLAP*QRLLKP
Trigger: TGGCTTGAGAAGCCTTTGGCAAGGAGCCAGATCCTG...CACCAGCTTGATGACTTGGCAGTCTCGCTGCCCTTGGTGGCCCTGCTTTCTCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR-3UTR GCA 90 bp TCCGCATGCCTGAAGACTAAGATGCCCAAGACTCAGCCAGGACACAGTGACCTGGTCCGTGGGTCAGAATaGCTGGAACCAGCATCTTGG +
Preference number: 2 (lower is better)
Translates to: SACLKTKMPKTQPGHSDLVRGSE*LEPASW
Trigger: CCAAGATGCTGGTTCCAGGCATTCTGACCCACGGAC...CAGGTCACTGTGTCCTGGCTGAGTCTTGGGCATCTTAGTCTTCAGGCATGCGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR-3UTR CCA 90 bp CAAGATAGAAATGAGCACAGCACCCAGAAGCAGGGATGGCCCCCTTTGGAGAAACAGCTGAGGAGGCCCTaGGTGGCTACTGCAGATCCT +
Preference number: 2 (lower is better)
Translates to: QDRNEHSTQKQGWPPLEKQLRRP*VATADP
Trigger: AGGATCTGCAGTAGCCACCCAGGGCCTCCTCAGCTG...TTTCTCCAAAGGGGGCCATCCCTGCTTCTGGGTGCTGTGCTCATTTCTATCTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR-3UTR CCA 90 bp CAGGGCTGTGATAATGGCAGAGGTCCAGAGCTGGCCTCCTGGTGGGGTACCTGCGAAAACCCTAAGATGTaGACGACAAACCAGGCGTTT +
Preference number: 2 (lower is better)
Translates to: QGCDNGRGPELASWWGTCENPKM*TTNQAF
Trigger: AAACGCCTGGTTTGTCGTCCACATCTTAGGGTTTTC...GCAGGTACCCCACCAGGAGGCCAGCTCTGGACCTCTGCCATTATCACAGCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR-3UTR CCA 90 bp CCCTGTCCGTGGGTCAGAATGCCTGGAACCAGCATCTTGGTCCTGCCTCCTGCCGAAAACCCTAAGATGTaGACGACAAACCAGGCGTTT +
Preference number: 2 (lower is better)
Translates to: PCPWVRMPGTSILVLPPAENPKM*TTNQAF
Trigger: AAACGCCTGGTTTGTCGTCCACATCTTAGGGTTTTC...GGCAGGAGGCAGGACCAAGATGCTGGTTCCAGGCATTCTGACCCACGGACAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR-3UTR CCA 90 bp CCAAGGCTGGATGAGAAAGCAGGGCCACCAAGGGCAGCGAGACTGCCAAGTCATTGGAAGGGACTTGTGTaGCAGCAACATACAGATGGG +
Preference number: 2 (lower is better)
Translates to: PRLDEKAGPPRAARLPSHWKGLV*QQHTDG
Trigger: CCCATCTGTATGTTGCTGCCACACAAGTCCCTTCCA...ATGACTTGGCAGTCTCGCTGCCCTTGGTGGCCCTGCTTTCTCATCCAGCCTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR-3UTR CCA 90 bp CAGGGCTGTGATAATGGCAGAGGTCCAGAGCTGGCCTCCTGGTGGGGTACCTGCGGAAAGCTGGTGTTCTaGGCAAGGTGCATACATTTT +
Preference number: 2 (lower is better)
Translates to: QGCDNGRGPELASWWGTCGKLVF*ARCIHF
Trigger: AAAATGTATGCACCTTGCCCAGAACACCAGCTTTCC...GCAGGTACCCCACCAGGAGGCCAGCTCTGGACCTCTGCCATTATCACAGCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR-3UTR TCA 90 bp CAGCAATGGAAGGGACTTGTGTGGCAGCAACATACAGATGGGTTTGCACCCAGTAGATCCTCTGCGCAGTaGCAACCAGCAGCAGGTGTG +
Preference number: 2 (lower is better)
Translates to: QQWKGLVWQQHTDGFAPSRSSAQ*QPAAGV
Trigger: CACACCTGCTGCTGGTTGTCACTGCGCAGAGGATCT...ACTGGGTGCAAACCCATCTGTATGTTGCTGCCACACAAGTCCCTTCCATTGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR-3UTR TCA 90 bp GAGCAAGCCACGCAACTCAGCGATGATGATAAACTGGGACAGGGCTATAGGATCAGATCCTCTGCGCAGTaGCAACCAGCAGCAGGTGTG +
Preference number: 2 (lower is better)
Translates to: EQATQLSDDDKLGQGYRIRSSAQ*QPAAGV
Trigger: CACACCTGCTGCTGGTTGTCACTGCGCAGAGGATCT...GATCCTATAGCCCTGTCCCAGTTTATCATCATCGCTGAGTTGCGTGGCTTGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR-3UTR TCA 90 bp ATGAGAAAGCAGGGCCACCAAGGGCAGCGAGACTGCCAAGTCATCAAGCTGGTGTGGAGTATCCAGCACTaGCAGCCTTGGCATTTCAGT +
Preference number: 2 (lower is better)
Translates to: MRKQGHQGQRDCQVIKLVWSIQH*QPWHFS
Trigger: ACTGAAATGCCAAGGCTGTCAGTGCTGGATACTCCA...CACCAGCTTGATGACTTGGCAGTCTCGCTGCCCTTGGTGGCCCTGCTTTCTCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR-3UTR GCA 90 bp ATGAGAAAGCAGGGCCACCAAGGGCAGCGAGACTGCCAAGTCATCAAGCTGGTGTCCCTTTGGGGATCTTaGCGAAATGCCTGGGTTAAG +
Preference number: 2 (lower is better)
Translates to: MRKQGHQGQRDCQVIKLVSLWGS*RNAWVK
Trigger: CTTAACCCAGGCATTTCGGCAAGATCCCCAAAGGGA...CACCAGCTTGATGACTTGGCAGTCTCGCTGCCCTTGGTGGCCCTGCTTTCTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR-3UTR CCA 90 bp CTTCACCCAACCTTAAGCCTTGTCCTTGGGCAAGGACTACAGCTGAACTCACTTAAAGAGCACTTGGTGTaGGGCTGGCAGGTGCCCTGC +
Preference number: 2 (lower is better)
Translates to: LHPTLSLVLGQGLQLNSLKEHLV*GWQVPC
Trigger: GCAGGGCACCTGCCAGCCCCACACCAAGTGCTCTTT...AAGTGAGTTCAGCTGTAGTCCTTGCCCAAGGACAAGGCTTAAGGTTGGGTGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR-3UTR CCA 90 bp ACAGGGAGCAGGAGCTACATGGATGCAGCTGGCAAAACAACTGACCTACTAAAGGCAGGCCATTCCAGCTaGGGATGTGAGGGGAGAGGT +
Preference number: 2 (lower is better)
Translates to: TGSRSYMDAAGKTTDLLKAGHSS*GCEGRG
Trigger: ACCTCTCCCCTCACATCCCCAGCTGGAATGGCCTGC...CTTTAGTAGGTCAGTTGTTTTGCCAGCTGCATCCATGTAGCTCCTGCTCCCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR-3UTR CCA 90 bp ACAGGGAGCAGGAGCTACATGGATGCAGCTGGCAAAACAACTGACCTACTAAAGCAGCTGAGGAGGCCCTaGGTGGCTACTGCAGATCCT +
Preference number: 2 (lower is better)
Translates to: TGSRSYMDAAGKTTDLLKQLRRP*VATADP
Trigger: AGGATCTGCAGTAGCCACCCAGGGCCTCCTCAGCTG...CTTTAGTAGGTCAGTTGTTTTGCCAGCTGCATCCATGTAGCTCCTGCTCCCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR-3UTR CCA 90 bp CCCATTGGCTCTGTGACTGCTCAAGATAGAAATGAGCACAGCACCCAGAAGCAGTTGCCTGTGACTCCTTaGGGACAAGGCTGGGGAGGT +
Preference number: 2 (lower is better)
Translates to: PIGSVTAQDRNEHSTQKQLPVTP*GQGWGG
Trigger: ACCTCCCCAGCCTTGTCCCCAAGGAGTCACAGGCAA...CTGCTTCTGGGTGCTGTGCTCATTTCTATCTTGAGCAGTCACAGAGCCAATGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR-3UTR CCA 90 bp CATGCCCCAATTTACACGTGCTGTTTGGCAGGGGATGGGAGTGGAAGAGATGGCGTGGGTCAGAATGCCTaGAACCAGCATCTTGGTCCT +
Preference number: 2 (lower is better)
Translates to: HAPIYTCCLAGDGSGRDGVGQNA*NQHLGP
Trigger: AGGACCAAGATGCTGGTTCCAGGCATTCTGACCCAC...GCCATCTCTTCCACTCCCATCCCCTGCCAAACAGCACGTGTAAATTGGGGCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR-3UTR CCA 90 bp CCCATTGGCTCTGTGACTGCTCAAGATAGAAATGAGCACAGCACCCAGAAGCAGTGGAGACAGAGCTGCTaGCTCTCCGCATGCCTGAAG +
Preference number: 2 (lower is better)
Translates to: PIGSVTAQDRNEHSTQKQWRQSC*LSACLK
Trigger: CTTCAGGCATGCGGAGAGCCAGCAGCTCTGTCTCCA...CTGCTTCTGGGTGCTGTGCTCATTTCTATCTTGAGCAGTCACAGAGCCAATGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR-3UTR CCA 90 bp CAAGATAGAAATGAGCACAGCACCCAGAAGCAGGGATGGCCCCCTTTGGAGAAATGGAGACAGAGCTGCTaGCTCTCCGCATGCCTGAAG +
Preference number: 2 (lower is better)
Translates to: QDRNEHSTQKQGWPPLEKWRQSC*LSACLK
Trigger: CTTCAGGCATGCGGAGAGCCAGCAGCTCTGTCTCCA...TTTCTCCAAAGGGGGCCATCCCTGCTTCTGGGTGCTGTGCTCATTTCTATCTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR-3UTR TCA 90 bp ATGAGAAAGCAGGGCCACCAAGGGCAGCGAGACTGCCAAGTCATCAAGCTGGTGGACAAACCAGGCGTTTaGAAGATCTGCCCAAATGAG +
Preference number: 2 (lower is better)
Translates to: MRKQGHQGQRDCQVIKLVDKPGV*KICPNE
Trigger: CTCATTTGGGCAGATCTTTCAAACGCCTGGTTTGTC...CACCAGCTTGATGACTTGGCAGTCTCGCTGCCCTTGGTGGCCCTGCTTTCTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR-3UTR TCA 90 bp GCCTGTGTTCTGCATTCAAGATCAGGGCTGGTGACAGAGCAGCAGGCCTTGGGATCCCCATTGGCTCTGTaGCTGCTCAAGATAGAAATG +
Preference number: 2 (lower is better)
Translates to: ACVLHSRSGLVTEQQALGSPLAL*LLKIEM
Trigger: CATTTCTATCTTGAGCAGTCACAGAGCCAATGGGGA...TCCCAAGGCCTGCTGCTCTGTCACCAGCCCTGATCTTGAATGCAGAACACAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR-3UTR TCA 90 bp CATGCCCCAATTTACACGTGCTGTTTGGCAGGGGATGGGAGTGGAAGAGATGGCTTCCCTTTGAGTGGCTaGAGAAAGGCTGAGGTGCTT +
Preference number: 2 (lower is better)
Translates to: HAPIYTCCLAGDGSGRDGFPLSG*RKAEVL
Trigger: AAGCACCTCAGCCTTTCTTCAGCCACTCAAAGGGAA...GCCATCTCTTCCACTCCCATCCCCTGCCAAACAGCACGTGTAAATTGGGGCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR-3UTR GCA 90 bp CATGCCCCAATTTACACGTGCTGTTTGGCAGGGGATGGGAGTGGAAGAGATGGCTCCCTTTGGGGATCTTaGCGAAATGCCTGGGTTAAG +
Preference number: 2 (lower is better)
Translates to: HAPIYTCCLAGDGSGRDGSLWGS*RNAWVK
Trigger: CTTAACCCAGGCATTTCGGCAAGATCCCCAAAGGGA...GCCATCTCTTCCACTCCCATCCCCTGCCAAACAGCACGTGTAAATTGGGGCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR-3UTR GCA 90 bp CTTCACCCAACCTTAAGCCTTGTCCTTGGGCAAGGACTACAGCTGAACTCACTTACTTGGAGACAGAGCTaGTGGCTCTCCGCATGCCTG +
Preference number: 2 (lower is better)
Translates to: LHPTLSLVLGQGLQLNSLTWRQS*WLSACL
Trigger: CAGGCATGCGGAGAGCCAGCAGCTCTGTCTCCAAGT...AAGTGAGTTCAGCTGTAGTCCTTGCCCAAGGACAAGGCTTAAGGTTGGGTGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR-3UTR CCA 90 bp GAGCAAGCCACGCAACTCAGCGATGATGATAAACTGGGACAGGGCTATAGGATCCCACTGTCTGGAACCTaGGGTAACACTAGGCCTCCA +
Preference number: 2 (lower is better)
Translates to: EQATQLSDDDKLGQGYRIPLSGT*GNTRPP
Trigger: TGGAGGCCTAGTGTTACCCCAGGTTCCAGACAGTGG...GATCCTATAGCCCTGTCCCAGTTTATCATCATCGCTGAGTTGCGTGGCTTGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR-3UTR CCA 90 bp ACAGAGCAAGCCACGCAACTCAGCGATGATGATAAACTGGGACAGGGCTATAGGGTGTCAGCTCCTTGCTaGCTGTACCAGCAGGCCATT +
Preference number: 2 (lower is better)
Translates to: TEQATQLSDDDKLGQGYRVSAPC*LYQQAI
Trigger: AATGGCCTGCTGGTACAGCCAGCAAGGAGCTGACAC...CCTATAGCCCTGTCCCAGTTTATCATCATCGCTGAGTTGCGTGGCTTGCTCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR-3UTR CCA 90 bp ATGAGAAAGCAGGGCCACCAAGGGCAGCGAGACTGCCAAGTCATCAAGCTGGTGAAAGAAACCACAACTTaGAGACAGAGCTGCTGGCTC +
Preference number: 2 (lower is better)
Translates to: MRKQGHQGQRDCQVIKLVKETTT*RQSCWL
Trigger: GAGCCAGCAGCTCTGTCTCCAAGTTGTGGTTTCTTT...CACCAGCTTGATGACTTGGCAGTCTCGCTGCCCTTGGTGGCCCTGCTTTCTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR-3UTR CCA 90 bp CATGCCCCAATTTACACGTGCTGTTTGGCAGGGGATGGGAGTGGAAGAGATGGCAGGGATGGCCCCCTTTaGAGAAAGCAAAGAAACCAC +
Preference number: 2 (lower is better)
Translates to: HAPIYTCCLAGDGSGRDGRDGPL*RKQRNH
Trigger: GTGGTTTCTTTGCTTTCTCCAAAGGGGGCCATCCCT...GCCATCTCTTCCACTCCCATCCCCTGCCAAACAGCACGTGTAAATTGGGGCATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR-3UTR CCA 90 bp CTGGGAAGTTTTCCTTCAACATCGTGCCTTACAGAGACTGGGGTTGACAGCTTATTGACCCAGTGCTTCTaGAGCAGGGCATGCCCACGC +
Preference number: 2 (lower is better)
Translates to: LGSFPSTSCLTETGVDSLLTQCF*SRACPR
Trigger: GCGTGGGCATGCCCTGCTCCAGAAGCACTGGGTCAA...TAAGCTGTCAACCCCAGTCTCTGTAAGGCACGATGTTGAAGGAAAACTTCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR CAA 90 bp TGTGTTCTGCATTCAAGATCAGGGCTGGTGACAGAGCAGCAGGCCTaGGGAAAGAGGCCTGTTAAGTTTCTGATGCAATTCCTGAGGCCG +
Preference number: 2 (lower is better)
Translates to: CVLHSRSGLVTEQQA*GKRPVKFLMQFLRP
Trigger: CGGCCTCAGGAATTGCATCAGAAACTTAACAGGCCTCTTTCCCAAGGCCTGCTGCTCTGTCACCAGCCCTGATCTTGAATGCAGAACACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR-3UTR TCA 90 bp CATGCCCCAATTTACACGTGCTGTTTGGCAGGGGATGGGAGTGGAAGAGATGGCGACAAACCAGGCGTTTaGAAGATCTGCCCAAATGAG +
Preference number: 2 (lower is better)
Translates to: HAPIYTCCLAGDGSGRDGDKPGV*KICPNE
Trigger: CTCATTTGGGCAGATCTTTCAAACGCCTGGTTTGTC...GCCATCTCTTCCACTCCCATCCCCTGCCAAACAGCACGTGTAAATTGGGGCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR-3UTR TCA 90 bp CTTCACCCAACCTTAAGCCTTGTCCTTGGGCAAGGACTACAGCTGAACTCACTTTTGTGCTGTTGCCTGTaGCTCCTTGGGGACAAGGCT +
Preference number: 2 (lower is better)
Translates to: LHPTLSLVLGQGLQLNSLLCCCL*LLGDKA
Trigger: AGCCTTGTCCCCAAGGAGTCACAGGCAACAGCACAA...AAGTGAGTTCAGCTGTAGTCCTTGCCCAAGGACAAGGCTTAAGGTTGGGTGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR-3UTR CCA 90 bp ACAGGGAGCAGGAGCTACATGGATGCAGCTGGCAAAACAACTGACCTACTAAAGCCACTGTCTGGAACCTaGGGTAACACTAGGCCTCCA +
Preference number: 2 (lower is better)
Translates to: TGSRSYMDAAGKTTDLLKPLSGT*GNTRPP
Trigger: TGGAGGCCTAGTGTTACCCCAGGTTCCAGACAGTGG...CTTTAGTAGGTCAGTTGTTTTGCCAGCTGCATCCATGTAGCTCCTGCTCCCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR-3UTR CCA 90 bp CTTCACCCAACCTTAAGCCTTGTCCTTGGGCAAGGACTACAGCTGAACTCACTTCCACTGTCTGGAACCTaGGGTAACACTAGGCCTCCA +
Preference number: 2 (lower is better)
Translates to: LHPTLSLVLGQGLQLNSLPLSGT*GNTRPP
Trigger: TGGAGGCCTAGTGTTACCCCAGGTTCCAGACAGTGG...AAGTGAGTTCAGCTGTAGTCCTTGCCCAAGGACAAGGCTTAAGGTTGGGTGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR-3UTR CCA 90 bp CTTCACCCAACCTTAAGCCTTGTCCTTGGGCAAGGACTACAGCTGAACTCACTTGTGTCAGCTCCTTGCTaGCTGTACCAGCAGGCCATT +
Preference number: 2 (lower is better)
Translates to: LHPTLSLVLGQGLQLNSLVSAPC*LYQQAI
Trigger: AATGGCCTGCTGGTACAGCCAGCAAGGAGCTGACAC...AAGTGAGTTCAGCTGTAGTCCTTGCCCAAGGACAAGGCTTAAGGTTGGGTGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR-3UTR CCA 90 bp CTTCACCCAACCTTAAGCCTTGTCCTTGGGCAAGGACTACAGCTGAACTCACTTGCTTTAAGCCCCATCTaGCTCCTGACCAGGAGATGG +
Preference number: 2 (lower is better)
Translates to: LHPTLSLVLGQGLQLNSLALSPI*LLTRRW
Trigger: CCATCTCCTGGTCAGGAGCCAGATGGGGCTTAAAGC...AAGTGAGTTCAGCTGTAGTCCTTGCCCAAGGACAAGGCTTAAGGTTGGGTGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR-3UTR CCA 90 bp CTTCACCCAACCTTAAGCCTTGTCCTTGGGCAAGGACTACAGCTGAACTCACTTCTCAGCACCAGGATCTaGCTCCTTGCCAAAGGCTTC +
Preference number: 2 (lower is better)
Translates to: LHPTLSLVLGQGLQLNSLLSTRI*LLAKGF
Trigger: GAAGCCTTTGGCAAGGAGCCAGATCCTGGTGCTGAG...AAGTGAGTTCAGCTGTAGTCCTTGCCCAAGGACAAGGCTTAAGGTTGGGTGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR-3UTR CCA 90 bp CAAGATAGAAATGAGCACAGCACCCAGAAGCAGGGATGGCCCCCTTTGGAGAAAAGGGTGTGGCACAGCTaGAGAAAACTGGCAAGAGGA +
Preference number: 2 (lower is better)
Translates to: QDRNEHSTQKQGWPPLEKRVWHS*RKLARG
Trigger: TCCTCTTGCCAGTTTTCTCCAGCTGTGCCACACCCT...TTTCTCCAAAGGGGGCCATCCCTGCTTCTGGGTGCTGTGCTCATTTCTATCTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR-3UTR CCA 90 bp CTTCACCCAACCTTAAGCCTTGTCCTTGGGCAAGGACTACAGCTGAACTCACTTTGGGAGTGGAAGAGATaGCAAGTGGCTGCCACCTGT +
Preference number: 2 (lower is better)
Translates to: LHPTLSLVLGQGLQLNSLWEWKR*QVAATC
Trigger: ACAGGTGGCAGCCACTTGCCATCTCTTCCACTCCCA...AAGTGAGTTCAGCTGTAGTCCTTGCCCAAGGACAAGGCTTAAGGTTGGGTGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR-3UTR CCA 90 bp ATGAGAAAGCAGGGCCACCAAGGGCAGCGAGACTGCCAAGTCATCAAGCTGGTGCAGGAACTATGTCTTTaGCACCAGCTGTCAATTCTG +
Preference number: 2 (lower is better)
Translates to: MRKQGHQGQRDCQVIKLVQELCL*HQLSIL
Trigger: CAGAATTGACAGCTGGTGCCAAAGACATAGTTCCTG...CACCAGCTTGATGACTTGGCAGTCTCGCTGCCCTTGGTGGCCCTGCTTTCTCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR-3UTR TCA 90 bp CCCATTGGCTCTGTGACTGCTCAAGATAGAAATGAGCACAGCACCCAGAAGCAGCAAATCCTAGGATTGTaGAACAGAAGCCCCTGCTGG +
Preference number: 2 (lower is better)
Translates to: PIGSVTAQDRNEHSTQKQQILGL*NRSPCW
Trigger: CCAGCAGGGGCTTCTGTTTCACAATCCTAGGATTTG...CTGCTTCTGGGTGCTGTGCTCATTTCTATCTTGAGCAGTCACAGAGCCAATGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR-3UTR TCA 90 bp CAAGATAGAAATGAGCACAGCACCCAGAAGCAGGGATGGCCCCCTTTGGAGAAAGAGCAAGAACACAGGTaGGACTTCTTAGGGGTAGGT +
Preference number: 2 (lower is better)
Translates to: QDRNEHSTQKQGWPPLEKEQEHR*DFLGVG
Trigger: ACCTACCCCTAAGAAGTCTCACCTGTGTTCTTGCTC...TTTCTCCAAAGGGGGCCATCCCTGCTTCTGGGTGCTGTGCTCATTTCTATCTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR-3UTR TCA 90 bp CTTCACCCAACCTTAAGCCTTGTCCTTGGGCAAGGACTACAGCTGAACTCACTTCTTCCCTCTTCCCTTTaGGTGGCTGAAGAAAGGCTG +
Preference number: 2 (lower is better)
Translates to: LHPTLSLVLGQGLQLNSLLPSSL*VAEERL
Trigger: CAGCCTTTCTTCAGCCACTCAAAGGGAAGAGGGAAG...AAGTGAGTTCAGCTGTAGTCCTTGCCCAAGGACAAGGCTTAAGGTTGGGTGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR-3UTR GCA 90 bp CAAGATAGAAATGAGCACAGCACCCAGAAGCAGGGATGGCCCCCTTTGGAGAAATCACCCTTATGGCCCTaGCTCAACTTTCAGCTAACC +
Preference number: 2 (lower is better)
Translates to: QDRNEHSTQKQGWPPLEKSPLWP*LNFQLT
Trigger: GGTTAGCTGAAAGTTGAGGCAGGGCCATAAGGGTGA...TTTCTCCAAAGGGGGCCATCCCTGCTTCTGGGTGCTGTGCTCATTTCTATCTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR-3UTR CCA 90 bp ACAGGGAGCAGGAGCTACATGGATGCAGCTGGCAAAACAACTGACCTACTAAAGAGGGTGTGGCACAGCTaGAGAAAACTGGCAAGAGGA +
Preference number: 2 (lower is better)
Translates to: TGSRSYMDAAGKTTDLLKRVWHS*RKLARG
Trigger: TCCTCTTGCCAGTTTTCTCCAGCTGTGCCACACCCT...CTTTAGTAGGTCAGTTGTTTTGCCAGCTGCATCCATGTAGCTCCTGCTCCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR-3UTR CCA 90 bp TACACACACTACACAGTAATATATACAGAGAGAGATGCTGGCCTGAGCCAAGGCTTGCCTGTGACTCCTTaGGGACAAGGCTGGGGAGGT +
Preference number: 2 (lower is better)
Translates to: YTHYTVIYTERDAGLSQGLPVTP*GQGWGG
Trigger: ACCTCCCCAGCCTTGTCCCCAAGGAGTCACAGGCAA...GCCTTGGCTCAGGCCAGCATCTCTCTCTGTATATATTACTGTGTAGTGTGTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR-3UTR CCA 90 bp CTTCACCCAACCTTAAGCCTTGTCCTTGGGCAAGGACTACAGCTGAACTCACTTCTGTTTGGCAGGGGATaGGAGTGGAAGAGATGGCAA +
Preference number: 2 (lower is better)
Translates to: LHPTLSLVLGQGLQLNSLLFGRG*EWKRWQ
Trigger: TTGCCATCTCTTCCACTCCCATCCCCTGCCAAACAG...AAGTGAGTTCAGCTGTAGTCCTTGCCCAAGGACAAGGCTTAAGGTTGGGTGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR-3UTR TCA 90 bp CTGGGAAGTTTTCCTTCAACATCGTGCCTTACAGAGACTGGGGTTGACAGCTTAAGCCTTCTTCTCCATTaGCCCAGTGCTTCTGGAGCA +
Preference number: 2 (lower is better)
Translates to: LGSFPSTSCLTETGVDSLSLLLH*PSASGA
Trigger: TGCTCCAGAAGCACTGGGTCAATGGAGAAGAAGGCT...TAAGCTGTCAACCCCAGTCTCTGTAAGGCACGATGTTGAAGGAAAACTTCCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR-3UTR GCA 90 bp ACAGGGAGCAGGAGCTACATGGATGCAGCTGGCAAAACAACTGACCTACTAAAGTCCCTTTGGGGATCTTaGCGAAATGCCTGGGTTAAG +
Preference number: 2 (lower is better)
Translates to: TGSRSYMDAAGKTTDLLKSLWGS*RNAWVK
Trigger: CTTAACCCAGGCATTTCGGCAAGATCCCCAAAGGGA...CTTTAGTAGGTCAGTTGTTTTGCCAGCTGCATCCATGTAGCTCCTGCTCCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR-3UTR GCA 90 bp TACACACACTACACAGTAATATATACAGAGAGAGATGCTGGCCTGAGCCAAGGCTCGAGCTGGAGGCTGTaGAGCAATGGAAGGGACTTG +
Preference number: 2 (lower is better)
Translates to: YTHYTVIYTERDAGLSQGSSWRL*SNGRDL
Trigger: CAAGTCCCTTCCATTGCTGCACAGCCTCCAGCTCGA...GCCTTGGCTCAGGCCAGCATCTCTCTCTGTATATATTACTGTGTAGTGTGTGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR-3UTR GCA 90 bp CCAAGGCTGGATGAGAAAGCAGGGCCACCAAGGGCAGCGAGACTGCCAAGTCATAGCTACATTACTTTGTaGTTTATCCAAGAGACAGGA +
Preference number: 2 (lower is better)
Translates to: PRLDEKAGPPRAARLPSHSYITL*FIQETG
Trigger: TCCTGTCTCTTGGATAAAGCACAAAGTAATGTAGCT...ATGACTTGGCAGTCTCGCTGCCCTTGGTGGCCCTGCTTTCTCATCCAGCCTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR-3UTR CCA 90 bp TACACACACTACACAGTAATATATACAGAGAGAGATGCTGGCCTGAGCCAAGGCGCTTTAAGCCCCATCTaGCTCCTGACCAGGAGATGG +
Preference number: 2 (lower is better)
Translates to: YTHYTVIYTERDAGLSQGALSPI*LLTRRW
Trigger: CCATCTCCTGGTCAGGAGCCAGATGGGGCTTAAAGC...GCCTTGGCTCAGGCCAGCATCTCTCTCTGTATATATTACTGTGTAGTGTGTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR-3UTR CCA 90 bp CTGGGAAGTTTTCCTTCAACATCGTGCCTTACAGAGACTGGGGTTGACAGCTTAGTGGGTCAGAATGCCTaGAACCAGCATCTTGGTCCT +
Preference number: 2 (lower is better)
Translates to: LGSFPSTSCLTETGVDSLVGQNA*NQHLGP
Trigger: AGGACCAAGATGCTGGTTCCAGGCATTCTGACCCAC...TAAGCTGTCAACCCCAGTCTCTGTAAGGCACGATGTTGAAGGAAAACTTCCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR-3UTR CCA 90 bp CTTCACCCAACCTTAAGCCTTGTCCTTGGGCAAGGACTACAGCTGAACTCACTTAGGGATGGCCCCCTTTaGAGAAAGCAAAGAAACCAC +
Preference number: 2 (lower is better)
Translates to: LHPTLSLVLGQGLQLNSLRDGPL*RKQRNH
Trigger: GTGGTTTCTTTGCTTTCTCCAAAGGGGGCCATCCCT...AAGTGAGTTCAGCTGTAGTCCTTGCCCAAGGACAAGGCTTAAGGTTGGGTGAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR-3UTR CCA 90 bp TACACACACTACACAGTAATATATACAGAGAGAGATGCTGGCCTGAGCCAAGGCTGGGAGTGGAAGAGATaGCAAGTGGCTGCCACCTGT +
Preference number: 2 (lower is better)
Translates to: YTHYTVIYTERDAGLSQGWEWKR*QVAATC
Trigger: ACAGGTGGCAGCCACTTGCCATCTCTTCCACTCCCA...GCCTTGGCTCAGGCCAGCATCTCTCTCTGTATATATTACTGTGTAGTGTGTGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR-3UTR CCA 90 bp ATGAGAAAGCAGGGCCACCAAGGGCAGCGAGACTGCCAAGTCATCAAGCTGGTGACCAGCTGTCAATTCTaGGAAGTTTTCCTTCAACAT +
Preference number: 2 (lower is better)
Translates to: MRKQGHQGQRDCQVIKLVTSCQF*EVFLQH
Trigger: ATGTTGAAGGAAAACTTCCCAGAATTGACAGCTGGT...CACCAGCTTGATGACTTGGCAGTCTCGCTGCCCTTGGTGGCCCTGCTTTCTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR-3UTR TCA 90 bp CTTCACCCAACCTTAAGCCTTGTCCTTGGGCAAGGACTACAGCTGAACTCACTTTACAGAGACTGGGGTTaGCAGCTTATTGCCTGTGTT +
Preference number: 2 (lower is better)
Translates to: LHPTLSLVLGQGLQLNSLYRDWG*QLIACV
Trigger: AACACAGGCAATAAGCTGTCAACCCCAGTCTCTGTA...AAGTGAGTTCAGCTGTAGTCCTTGCCCAAGGACAAGGCTTAAGGTTGGGTGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR-3UTR CCA 90 bp CAGCAATGGAAGGGACTTGTGTGGCAGCAACATACAGATGGGTTTGCACCCAGTGAAAACCCTAAGATGTaGACGACAAACCAGGCGTTT +
Preference number: 2 (lower is better)
Translates to: QQWKGLVWQQHTDGFAPSENPKM*TTNQAF
Trigger: AAACGCCTGGTTTGTCGTCCACATCTTAGGGTTTTC...ACTGGGTGCAAACCCATCTGTATGTTGCTGCCACACAAGTCCCTTCCATTGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR-3UTR CCA 90 bp CATCTTTTATTGGATACAGAACCAGAAATTCTGATGCCCGTGAATCCTTTTAAACCAGGGAAGGCCCCCTaGGGGCTGGAGGTACAGGCA +
Preference number: 2 (lower is better)
Translates to: HLLLDTEPEILMPVNPFKPGKAP*GLEVQA
Trigger: TGCCTGTACCTCCAGCCCCCAGGGGGCCTTCCCTGG...TTTAAAAGGATTCACGGGCATCAGAATTTCTGGTTCTGTATCCAATAAAAGATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR-3UTR GCA 90 bp CATGCCCCAATTTACACGTGCTGTTTGGCAGGGGATGGGAGTGGAAGAGATGGCAGCTACATTACTTTGTaGTTTATCCAAGAGACAGGA +
Preference number: 2 (lower is better)
Translates to: HAPIYTCCLAGDGSGRDGSYITL*FIQETG
Trigger: TCCTGTCTCTTGGATAAAGCACAAAGTAATGTAGCT...GCCATCTCTTCCACTCCCATCCCCTGCCAAACAGCACGTGTAAATTGGGGCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR-3UTR GCA 90 bp CTTCACCCAACCTTAAGCCTTGTCCTTGGGCAAGGACTACAGCTGAACTCACTTTGGGGAAAAGCAGCCTaGATAAGCATGAAGTACTCA +
Preference number: 2 (lower is better)
Translates to: LHPTLSLVLGQGLQLNSLWGKAA*ISMKYS
Trigger: TGAGTACTTCATGCTTATGCAGGCTGCTTTTCCCCA...AAGTGAGTTCAGCTGTAGTCCTTGCCCAAGGACAAGGCTTAAGGTTGGGTGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR-3UTR CCA 90 bp CTTCACCCAACCTTAAGCCTTGTCCTTGGGCAAGGACTACAGCTGAACTCACTTGGAAAGCTGGTGTTCTaGGCAAGGTGCATACATTTT +
Preference number: 2 (lower is better)
Translates to: LHPTLSLVLGQGLQLNSLGKLVF*ARCIHF
Trigger: AAAATGTATGCACCTTGCCCAGAACACCAGCTTTCC...AAGTGAGTTCAGCTGTAGTCCTTGCCCAAGGACAAGGCTTAAGGTTGGGTGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR-3UTR CCA 90 bp TACACACACTACACAGTAATATATACAGAGAGAGATGCTGGCCTGAGCCAAGGCACAGCTGGAGAAAACTaGCAAGAGGATCCCACCTTA +
Preference number: 2 (lower is better)
Translates to: YTHYTVIYTERDAGLSQGTAGEN*QEDPTL
Trigger: TAAGGTGGGATCCTCTTGCCAGTTTTCTCCAGCTGT...GCCTTGGCTCAGGCCAGCATCTCTCTCTGTATATATTACTGTGTAGTGTGTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR-3UTR CCA 90 bp CATCTTTTATTGGATACAGAACCAGAAATTCTGATGCCCGTGAATCCTTTTAAACCTTGGGGACAAGGCTaGGGAGGTGGGAGTAACGGG +
Preference number: 2 (lower is better)
Translates to: HLLLDTEPEILMPVNPFKPWGQG*GGGSNG
Trigger: CCCGTTACTCCCACCTCCCCAGCCTTGTCCCCAAGG...TTTAAAAGGATTCACGGGCATCAGAATTTCTGGTTCTGTATCCAATAAAAGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR-3UTR GCA 90 bp CATCTTTTATTGGATACAGAACCAGAAATTCTGATGCCCGTGAATCCTTTTAAAGGTGTGTCAGCTCCTTaGTGGCTGTACCAGCAGGCC +
Preference number: 2 (lower is better)
Translates to: HLLLDTEPEILMPVNPFKGVSAP*WLYQQA
Trigger: GGCCTGCTGGTACAGCCAGCAAGGAGCTGACACACC...TTTAAAAGGATTCACGGGCATCAGAATTTCTGGTTCTGTATCCAATAAAAGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR-3UTR GCA 90 bp TACACACACTACACAGTAATATATACAGAGAGAGATGCTGGCCTGAGCCAAGGCTTATTGCCTGTGTTCTaGATTCAAGATCAGGGCTGG +
Preference number: 2 (lower is better)
Translates to: YTHYTVIYTERDAGLSQGLLPVF*IQDQGW
Trigger: CCAGCCCTGATCTTGAATGCAGAACACAGGCAATAA...GCCTTGGCTCAGGCCAGCATCTCTCTCTGTATATATTACTGTGTAGTGTGTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR-3UTR GCA 90 bp CATCTTTTATTGGATACAGAACCAGAAATTCTGATGCCCGTGAATCCTTTTAAATCGAGCTGGAGGCTGTaGAGCAATGGAAGGGACTTG +
Preference number: 2 (lower is better)
Translates to: HLLLDTEPEILMPVNPFKSSWRL*SNGRDL
Trigger: CAAGTCCCTTCCATTGCTGCACAGCCTCCAGCTCGA...TTTAAAAGGATTCACGGGCATCAGAATTTCTGGTTCTGTATCCAATAAAAGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR-3UTR CCA 90 bp CATCTTTTATTGGATACAGAACCAGAAATTCTGATGCCCGTGAATCCTTTTAAACCTCCACCTCCCTTCTaGGTCACAGAAGGAGAGGAA +
Preference number: 2 (lower is better)
Translates to: HLLLDTEPEILMPVNPFKPPPPF*VTEGEE
Trigger: TTCCTCTCCTTCTGTGACCCAGAAGGGAGGTGGAGG...TTTAAAAGGATTCACGGGCATCAGAATTTCTGGTTCTGTATCCAATAAAAGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR-3UTR CCA 90 bp CATCTTTTATTGGATACAGAACCAGAAATTCTGATGCCCGTGAATCCTTTTAAATCGGCAGAGGGCATCTaGGTGACATGGAGCAAAGTG +
Preference number: 2 (lower is better)
Translates to: HLLLDTEPEILMPVNPFKSAEGI*VTWSKV
Trigger: CACTTTGCTCCATGTCACCCAGATGCCCTCTGCCGA...TTTAAAAGGATTCACGGGCATCAGAATTTCTGGTTCTGTATCCAATAAAAGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR-3UTR TCA 90 bp CATCTTTTATTGGATACAGAACCAGAAATTCTGATGCCCGTGAATCCTTTTAAATCCCCATTGGCTCTGTaGCTGCTCAAGATAGAAATG +
Preference number: 2 (lower is better)
Translates to: HLLLDTEPEILMPVNPFKSPLAL*LLKIEM
Trigger: CATTTCTATCTTGAGCAGTCACAGAGCCAATGGGGA...TTTAAAAGGATTCACGGGCATCAGAATTTCTGGTTCTGTATCCAATAAAAGATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR-3UTR CCA 90 bp CATCTTTTATTGGATACAGAACCAGAAATTCTGATGCCCGTGAATCCTTTTAAACAGGAACTATGTCTTTaGCACCAGCTGTCAATTCTG +
Preference number: 2 (lower is better)
Translates to: HLLLDTEPEILMPVNPFKQELCL*HQLSIL
Trigger: CAGAATTGACAGCTGGTGCCAAAGACATAGTTCCTG...TTTAAAAGGATTCACGGGCATCAGAATTTCTGGTTCTGTATCCAATAAAAGATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR CCA 72 bp CCAAGCCAGGGCCTCTCCAGAGGTCCAAAGAGCACTTaGTGTGGGGCTGGCAGGTGCCCTGCCGCCCCTCAC +
Preference number: 3 (lower is better)
Translates to: PSQGLSRGPKST*CGAGRCPAAPH
Trigger: GTGAGGGGCGGCAGGGCACCTGCCAGCCCCACACCAAGTGCTCTTTGGACCTCTGGAGAGGCCCTGGCTTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR TCA 72 bp GAGGCCCTGGGTGGCTACTGCAGATCCTCTGCGCAGTaGCAACCAGCAGCAGGTGTGTCAGCTCCTTGCTGG +
Preference number: 3 (lower is better)
Translates to: EALGGYCRSSAQ*QPAAGVSAPCW
Trigger: CCAGCAAGGAGCTGACACACCTGCTGCTGGTTGTCACTGCGCAGAGGATCTGCAGTAGCCACCCAGGGCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR TCA 72 bp GGCAAGTGGCTGCCACCTGTGAGCCTTCTTCTCCATTaGCCCAGTGCTTCTGGAGCAGGGCATGCCCACGCG +
Preference number: 3 (lower is better)
Translates to: GKWLPPVSLLLH*PSASGAGHAHA
Trigger: CGCGTGGGCATGCCCTGCTCCAGAAGCACTGGGTCAATGGAGAAGAAGGCTCACAGGTGGCAGCCACTTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR CCA 72 bp CCAGCACAGCAGGTAGCCCGGGGTCTCCCCTCCCTTTaGGGATCTTGCCGAAATGCCTGGGTTAAGAGGTCC +
Preference number: 3 (lower is better)
Translates to: PAQQVARGLPSL*GSCRNAWVKRS
Trigger: GGACCTCTTAACCCAGGCATTTCGGCAAGATCCCCAAAGGGAGGGGAGACCCCGGGCTACCTGCTGTGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR GCA 72 bp TGGATGAGAAAGCAGGGCCACCAAGGGCAGCGAGACTaGCAAGTCATCAAGCTGGTGGCTAGGGTAGGCCCC +
Preference number: 3 (lower is better)
Translates to: WMRKQGHQGQRD*QVIKLVARVGP
Trigger: GGGGCCTACCCTAGCCACCAGCTTGATGACTTGGCAGTCTCGCTGCCCTTGGTGGCCCTGCTTTCTCATCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR-3UTR CAA 90 bp GACAACCAGCAGCAGGTGTGTCAGCTCCTTGCTGGCTGTACCAGCAGGCCATTCAGGTCCAAAGAGCACTaGGTGTGGGGCTGGCAGGTG +
Preference number: 3 (lower is better)
Translates to: DNQQQVCQLLAGCTSRPFRSKEH*VWGWQV
Trigger: CACCTGCCAGCCCCACACCAAGTGCTCTTTGGACCT...GAATGGCCTGCTGGTACAGCCAGCAAGGAGCTGACACACCTGCTGCTGGTTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR-3UTR CAA 90 bp GGAGAGGAAAGTTGTGCTGTTGCCTGTGACTCCTTGGGGACAAGGCTGGGGAGGAGGTCCAAAGAGCACTaGGTGTGGGGCTGGCAGGTG +
Preference number: 3 (lower is better)
Translates to: GEESCAVACDSLGTRLGRRSKEH*VWGWQV
Trigger: CACCTGCCAGCCCCACACCAAGTGCTCTTTGGACCT...CCTCCCCAGCCTTGTCCCCAAGGAGTCACAGGCAACAGCACAACTTTCCTCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR CCA 72 bp GTGCTCAGCCAGTGGGGCTTTGGTGACCAGACTTCTTaGGTACGATGCAAGGGCCGGCGACACCCTATCACA +
Preference number: 3 (lower is better)
Translates to: VLSQWGFGDQTS*VRCKGRRHPIT
Trigger: TGTGATAGGGTGTCGCCGGCCCTTGCATCGTACCCAAGAAGTCTGGTCACCAAAGCCCCACTGGCTGAGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR-3UTR CAA 90 bp GGAGAGGAAAGTTGTGCTGTTGCCTGTGACTCCTTGGGGACAAGGCTGGGGAGGCCAGGATCTGGCTCCTaGCCAAAGGCTTCTCAAGCC +
Preference number: 3 (lower is better)
Translates to: GEESCAVACDSLGTRLGRPGSGS*PKASQA
Trigger: GGCTTGAGAAGCCTTTGGCAAGGAGCCAGATCCTGG...CCTCCCCAGCCTTGTCCCCAAGGAGTCACAGGCAACAGCACAACTTTCCTCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR-3UTR CAA 90 bp GGAGAGGAAAGTTGTGCTGTTGCCTGTGACTCCTTGGGGACAAGGCTGGGGAGGTCTCACTGTAGGGCTTaGCTGGGTCCCTTGCTCTCT +
Preference number: 3 (lower is better)
Translates to: GEESCAVACDSLGTRLGRSHCRA*LGPLLS
Trigger: AGAGAGCAAGGGACCCAGCAAAGCCCTACAGTGAGA...CCTCCCCAGCCTTGTCCCCAAGGAGTCACAGGCAACAGCACAACTTTCCTCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR-3UTR CAA 90 bp ATGAGAAAGCAGGGCCACCAAGGGCAGCGAGACTGCCAAGTCATCAAGCTGGTGCCCCTGCTGGCAGGCTaGGCCAGCTACATTACTTTG +
Preference number: 3 (lower is better)
Translates to: MRKQGHQGQRDCQVIKLVPLLAG*ASYITL
Trigger: CAAAGTAATGTAGCTGGCCAAGCCTGCCAGCAGGGG...CACCAGCTTGATGACTTGGCAGTCTCGCTGCCCTTGGTGGCCCTGCTTTCTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR TCA 72 bp AATTCGGTTAGGTGTGCTCAGCCAGTGGGGCTTTGGTaGCCAGACTTCTTGGGTACGATGCAAGGGCCGGCG +
Preference number: 3 (lower is better)
Translates to: NSVRCAQPVGLW*PDFLGTMQGPA
Trigger: CGCCGGCCCTTGCATCGTACCCAAGAAGTCTGGTCACCAAAGCCCCACTGGCTGAGCACACCTAACCGAATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR TCA 72 bp TCCCCTGCCCAGGGAGATGTCCAAATCCTAGGATTGTaGAACAGAAGCCCCTGCTGGCAGGCTTGGCCAGCT +
Preference number: 3 (lower is better)
Translates to: SPAQGDVQILGL*NRSPCWQAWPA
Trigger: AGCTGGCCAAGCCTGCCAGCAGGGGCTTCTGTTTCACAATCCTAGGATTTGGACATCTCCCTGGGCAGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR GCA 72 bp TTCTTAGGGGTAGGTTTCCCTGTCCGTGGGTCAGAATaGCTGGAACCAGCATCTTGGTCCTGCCTCCTGCCC +
Preference number: 3 (lower is better)
Translates to: FLGVGFPVRGSE*LEPASWSCLLP
Trigger: GGGCAGGAGGCAGGACCAAGATGCTGGTTCCAGGCATTCTGACCCACGGACAGGGAAACCTACCCCTAAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR GCA 72 bp GCTGCCACCTGTGAGCCTTCTTCTCCATTGACCCAGTaGTTCTGGAGCAGGGCATGCCCACGCGAGTTTTCT +
Preference number: 3 (lower is better)
Translates to: AATCEPSSPLTQ*FWSRACPREFS
Trigger: AGAAAACTCGCGTGGGCATGCCCTGCTCCAGAAGCACTGGGTCAATGGAGAAGAAGGCTCACAGGTGGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR CCA 72 bp AAGGAGAGGAAAGTTGTGCTGTTGCCTGTGACTCCTTaGGGACAAGGCTGGGGAGGTGGGAGTAACGGGAGG +
Preference number: 3 (lower is better)
Translates to: KERKVVLLPVTP*GQGWGGGSNGR
Trigger: CCTCCCGTTACTCCCACCTCCCCAGCCTTGTCCCCAAGGAGTCACAGGCAACAGCACAACTTTCCTCTCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR CCA 72 bp CACGTGCTGTTTGGCAGGGGATGGGAGTGGAAGAGATaGCAAGTGGCTGCCACCTGTGAGCCTTCTTCTCCA +
Preference number: 3 (lower is better)
Translates to: HVLFGRGWEWKR*QVAATCEPSSP
Trigger: TGGAGAAGAAGGCTCACAGGTGGCAGCCACTTGCCATCTCTTCCACTCCCATCCCCTGCCAAACAGCACGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR-3UTR CAA 90 bp CCAAGGCTGGATGAGAAAGCAGGGCCACCAAGGGCAGCGAGACTGCCAAGTCATAGGAAAGTTGTGCTGTaGCCTGTGACTCCTTGGGGA +
Preference number: 3 (lower is better)
Translates to: PRLDEKAGPPRAARLPSHRKVVL*PVTPWG
Trigger: TCCCCAAGGAGTCACAGGCAACAGCACAACTTTCCT...ATGACTTGGCAGTCTCGCTGCCCTTGGTGGCCCTGCTTTCTCATCCAGCCTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR TCA 72 bp GAGACGCAGAGGGCTTCCCTCTTCCCTTTGAGTGGCTaGAGAAAGGCTGAGGTGCTTCTAAGGAAGCCAGGC +
Preference number: 3 (lower is better)
Translates to: ETQRASLFPLSG*RKAEVLLRKPG
Trigger: GCCTGGCTTCCTTAGAAGCACCTCAGCCTTTCTTCAGCCACTCAAAGGGAAGAGGGAAGCCCTCTGCGTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR CCA 72 bp GGTCTCCCCTCCCTTTGGGGATCTTGCCGAAATGCCTaGGTTAAGAGGTCCCTTCTCACTGTAGGGCTTTGC +
Preference number: 3 (lower is better)
Translates to: GLPSLWGSCRNA*VKRSLLTVGLC
Trigger: GCAAAGCCCTACAGTGAGAAGGGACCTCTTAACCCAGGCATTTCGGCAAGATCCCCAAAGGGAGGGGAGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR CCA 72 bp GCAATGGAAGGGACTTGTGTGGCAGCAACATACAGATaGGTTTGCACCCAGTCCAGGGTGTGGCACAGCTGG +
Preference number: 3 (lower is better)
Translates to: AMEGTCVAATYR*VCTQSRVWHSW
Trigger: CCAGCTGTGCCACACCCTGGACTGGGTGCAAACCCATCTGTATGTTGCTGCCACACAAGTCCCTTCCATTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR CCA 72 bp CCCAATTTACACGTGCTGTTTGGCAGGGGATGGGAGTaGAAGAGATGGCAAGTGGCTGCCACCTGTGAGCCT +
Preference number: 3 (lower is better)
Translates to: PNLHVLFGRGWE*KRWQVAATCEP
Trigger: AGGCTCACAGGTGGCAGCCACTTGCCATCTCTTCCACTCCCATCCCCTGCCAAACAGCACGTGTAAATTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR CCA 72 bp GATCAGATACATTCGGCAGAGGGCATCTGGGTGACATaGAGCAAAGTGCTGGGATGGCAATGCCTGGGTGGG +
Preference number: 3 (lower is better)
Translates to: DQIHSAEGIWVT*SKVLGWQCLGG
Trigger: CCCACCCAGGCATTGCCATCCCAGCACTTTGCTCCATGTCACCCAGATGCCCTCTGCCGAATGTATCTGATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR-3UTR CAA 90 bp CAGCAATGGAAGGGACTTGTGTGGCAGCAACATACAGATGGGTTTGCACCCAGTGGGTCTCCCCTCCCTTaGGGGATCTTGCCGAAATGC +
Preference number: 3 (lower is better)
Translates to: QQWKGLVWQQHTDGFAPSGSPLP*GILPKC
Trigger: GCATTTCGGCAAGATCCCCAAAGGGAGGGGAGACCC...ACTGGGTGCAAACCCATCTGTATGTTGCTGCCACACAAGTCCCTTCCATTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR-3UTR CAA 90 bp CAAGATAGAAATGAGCACAGCACCCAGAAGCAGGGATGGCCCCCTTTGGAGAAAGGGTCTCCCCTCCCTTaGGGGATCTTGCCGAAATGC +
Preference number: 3 (lower is better)
Translates to: QDRNEHSTQKQGWPPLEKGSPLP*GILPKC
Trigger: GCATTTCGGCAAGATCCCCAAAGGGAGGGGAGACCC...TTTCTCCAAAGGGGGCCATCCCTGCTTCTGGGTGCTGTGCTCATTTCTATCTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR-3UTR CAA 90 bp ACAGAGCAAGCCACGCAACTCAGCGATGATGATAAACTGGGACAGGGCTATAGGGGGTCTCCCCTCCCTTaGGGGATCTTGCCGAAATGC +
Preference number: 3 (lower is better)
Translates to: TEQATQLSDDDKLGQGYRGSPLP*GILPKC
Trigger: GCATTTCGGCAAGATCCCCAAAGGGAGGGGAGACCC...CCTATAGCCCTGTCCCAGTTTATCATCATCGCTGAGTTGCGTGGCTTGCTCTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR TCA 72 bp GAGCAGGAGCTACATGGATGCAGCTGGCAAAACAACTaGCCTACTAAAGGCAGCTGGGGCCCAAGTGCACCT +
Preference number: 3 (lower is better)
Translates to: EQELHGCSWQNN*PTKGSWGPSAP
Trigger: AGGTGCACTTGGGCCCCAGCTGCCTTTAGTAGGTCAGTTGTTTTGCCAGCTGCATCCATGTAGCTCCTGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR TCA 72 bp CAACTTGGAGACAGAGCTGCTGGCTCTCCGCATGCCTaGAGACTAAGATGCCCAAGACTCAGCCAGGACACA +
Preference number: 3 (lower is better)
Translates to: QLGDRAAGSPHA*RLRCPRLSQDT
Trigger: TGTGTCCTGGCTGAGTCTTGGGCATCTTAGTCTTCAGGCATGCGGAGAGCCAGCAGCTCTGTCTCCAAGTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR TCA 72 bp GGAAGCCAGGCACCCACCCTATCCCCATTGGCTCTGTaGCTGCTCAAGATAGAAATGAGCACAGCACCCAGA +
Preference number: 3 (lower is better)
Translates to: GSQAPTLSPLAL*LLKIEMSTAPR
Trigger: TCTGGGTGCTGTGCTCATTTCTATCTTGAGCAGTCACAGAGCCAATGGGGATAGGGTGGGTGCCTGGCTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR TCA 72 bp GGCTTCCCTCTTCCCTTTGAGTGGCTGAAGAAAGGCTaGGGTGCTTCTAAGGAAGCCAGGCACCCACCCTAT +
Preference number: 3 (lower is better)
Translates to: GFPLPFEWLKKG*GASKEARHPPY
Trigger: ATAGGGTGGGTGCCTGGCTTCCTTAGAAGCACCTCAGCCTTTCTTCAGCCACTCAAAGGGAAGAGGGAAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR TCA 72 bp ATGGGAGTGGAAGAGATGGCAAGTGGCTGCCACCTGTaGGCCTTCTTCTCCATTGACCCAGTGCTTCTGGAG +
Preference number: 3 (lower is better)
Translates to: MGVEEMASGCHL*AFFSIDPVLLE
Trigger: CTCCAGAAGCACTGGGTCAATGGAGAAGAAGGCTCACAGGTGGCAGCCACTTGCCATCTCTTCCACTCCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR GCA 72 bp ACCACAACTTGGAGACAGAGCTGCTGGCTCTCCGCATaGCTGAAGACTAAGATGCCCAAGACTCAGCCAGGA +
Preference number: 3 (lower is better)
Translates to: TTTWRQSCWLSA*LKTKMPKTQPG
Trigger: TCCTGGCTGAGTCTTGGGCATCTTAGTCTTCAGGCATGCGGAGAGCCAGCAGCTCTGTCTCCAAGTTGTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR CCA 72 bp GCAACATACAGATGGGTTTGCACCCAGTCCAGGGTGTaGCACAGCTGGAGAAAACTGGCAAGAGGATCCCAC +
Preference number: 3 (lower is better)
Translates to: ATYRWVCTQSRV*HSWRKLARGSH
Trigger: GTGGGATCCTCTTGCCAGTTTTCTCCAGCTGTGCCACACCCTGGACTGGGTGCAAACCCATCTGTATGTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR CCA 72 bp GAGCTGGAGGCTGTGCAGCAATGGAAGGGACTTGTGTaGCAGCAACATACAGATGGGTTTGCACCCAGTCCA +
Preference number: 3 (lower is better)
Translates to: ELEAVQQWKGLV*QQHTDGFAPSP
Trigger: TGGACTGGGTGCAAACCCATCTGTATGTTGCTGCCACACAAGTCCCTTCCATTGCTGCACAGCCTCCAGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR CCA 72 bp CAGAGCAAGCCACGCAACTCAGCGATGATGATAAACTaGGACAGGGCTATAGGATCGGGGAGCATCGAGCTG +
Preference number: 3 (lower is better)
Translates to: QSKPRNSAMMIN*DRAIGSGSIEL
Trigger: CAGCTCGATGCTCCCCGATCCTATAGCCCTGTCCCAGTTTATCATCATCGCTGAGTTGCGTGGCTTGCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR CCA 72 bp ATATATACAGAGAGAGATGCTGGCCTGAGCCAAGGCTaGATGAGAAAGCAGGGCCACCAAGGGCAGCGAGAC +
Preference number: 3 (lower is better)
Translates to: IYTERDAGLSQG*MRKQGHQGQRD
Trigger: GTCTCGCTGCCCTTGGTGGCCCTGCTTTCTCATCCAGCCTTGGCTCAGGCCAGCATCTCTCTCTGTATATAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR-3UTR CAA 90 bp GAGCAAGCCACGCAACTCAGCGATGATGATAAACTGGGACAGGGCTATAGGATCCCAGGATCTGGCTCCTaGCCAAAGGCTTCTCAAGCC +
Preference number: 3 (lower is better)
Translates to: EQATQLSDDDKLGQGYRIPGSGS*PKASQA
Trigger: GGCTTGAGAAGCCTTTGGCAAGGAGCCAGATCCTGG...GATCCTATAGCCCTGTCCCAGTTTATCATCATCGCTGAGTTGCGTGGCTTGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR-3UTR CAA 90 bp CTGGGAAGTTTTCCTTCAACATCGTGCCTTACAGAGACTGGGGTTGACAGCTTAGTTGCCTGTGACTCCTaGGGGACAAGGCTGGGGAGG +
Preference number: 3 (lower is better)
Translates to: LGSFPSTSCLTETGVDSLVACDS*GTRLGR
Trigger: CCTCCCCAGCCTTGTCCCCAAGGAGTCACAGGCAAC...TAAGCTGTCAACCCCAGTCTCTGTAAGGCACGATGTTGAAGGAAAACTTCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR GCA 72 bp GAAGGGACTTGTGTGGCAGCAACATACAGATGGGTTTaGACCCAGTCCAGGGTGTGGCACAGCTGGAGAAAA +
Preference number: 3 (lower is better)
Translates to: EGTCVAATYRWV*TQSRVWHSWRK
Trigger: TTTTCTCCAGCTGTGCCACACCCTGGACTGGGTGCAAACCCATCTGTATGTTGCTGCCACACAAGTCCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR CCA 72 bp TCAAGCCAAACCATGCCCCAATTTACACGTGCTGTTTaGCAGGGGATGGGAGTGGAAGAGATGGCAAGTGGC +
Preference number: 3 (lower is better)
Translates to: SSQTMPQFTRAV*QGMGVEEMASG
Trigger: GCCACTTGCCATCTCTTCCACTCCCATCCCCTGCCAAACAGCACGTGTAAATTGGGGCATGGTTTGGCTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR-3UTR CAA 90 bp CATGCCCCAATTTACACGTGCTGTTTGGCAGGGGATGGGAGTGGAAGAGATGGCCAAAGAAACCACAACTaGGAGACAGAGCTGCTGGCT +
Preference number: 3 (lower is better)
Translates to: HAPIYTCCLAGDGSGRDGQRNHN*ETELLA
Trigger: AGCCAGCAGCTCTGTCTCCAAGTTGTGGTTTCTTTG...GCCATCTCTTCCACTCCCATCCCCTGCCAAACAGCACGTGTAAATTGGGGCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR GCA 72 bp GGAGAAAGCAAAGAAACCACAACTTGGAGACAGAGCTaGTGGCTCTCCGCATGCCTGAAGACTAAGATGCCC +
Preference number: 3 (lower is better)
Translates to: GESKETTTWRQS*WLSACLKTKMP
Trigger: GGGCATCTTAGTCTTCAGGCATGCGGAGAGCCAGCAGCTCTGTCTCCAAGTTGTGGTTTCTTTGCTTTCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR CCA 72 bp ACGGTCTGCTCTTCACCCAACCTTAAGCCTTGTCCTTaGGCAAGGACTACAGCTGAACTCACTTGTCCAGGT +
Preference number: 3 (lower is better)
Translates to: TVCSSPNLKPCP*ARTTAELTCPG
Trigger: ACCTGGACAAGTGAGTTCAGCTGTAGTCCTTGCCCAAGGACAAGGCTTAAGGTTGGGTGAAGAGCAGACCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR-3UTR CAA 90 bp CAGCAATGGAAGGGACTTGTGTGGCAGCAACATACAGATGGGTTTGCACCCAGTCCCCGAAGCAAGGAGTaGTATAGAGACTGCTTTGAG +
Preference number: 3 (lower is better)
Translates to: QQWKGLVWQQHTDGFAPSPRSKE*YRDCFE
Trigger: CTCAAAGCAGTCTCTATACAACTCCTTGCTTCGGGG...ACTGGGTGCAAACCCATCTGTATGTTGCTGCCACACAAGTCCCTTCCATTGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR-3UTR CAA 90 bp TACACACACTACACAGTAATATATACAGAGAGAGATGCTGGCCTGAGCCAAGGCCCAGGATCTGGCTCCTaGCCAAAGGCTTCTCAAGCC +
Preference number: 3 (lower is better)
Translates to: YTHYTVIYTERDAGLSQGPGSGS*PKASQA
Trigger: GGCTTGAGAAGCCTTTGGCAAGGAGCCAGATCCTGG...GCCTTGGCTCAGGCCAGCATCTCTCTCTGTATATATTACTGTGTAGTGTGTGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR-3UTR CAA 90 bp CTGGGAAGTTTTCCTTCAACATCGTGCCTTACAGAGACTGGGGTTGACAGCTTAGAGCCTTCTTCTCCATaGACCCAGTGCTTCTGGAGC +
Preference number: 3 (lower is better)
Translates to: LGSFPSTSCLTETGVDSLEPSSP*TQCFWS
Trigger: GCTCCAGAAGCACTGGGTCAATGGAGAAGAAGGCTC...TAAGCTGTCAACCCCAGTCTCTGTAAGGCACGATGTTGAAGGAAAACTTCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR GCA 72 bp TCTTCTCCATTGACCCAGTGCTTCTGGAGCAGGGCATaGCCACGCGAGTTTTCTGTGCCTTACTTAAGTATG +
Preference number: 3 (lower is better)
Translates to: SSPLTQCFWSRA*PREFSVPYLSM
Trigger: CATACTTAAGTAAGGCACAGAAAACTCGCGTGGGCATGCCCTGCTCCAGAAGCACTGGGTCAATGGAGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR GCA 72 bp CATCGTGCCTTACAGAGACTGGGGTTGACAGCTTATTaGCTGTGTTCTGCATTCAAGATCAGGGCTGGTGAC +
Preference number: 3 (lower is better)
Translates to: HRALQRLGLTAY*LCSAFKIRAGD
Trigger: GTCACCAGCCCTGATCTTGAATGCAGAACACAGGCAATAAGCTGTCAACCCCAGTCTCTGTAAGGCACGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR-3UTR CAA 90 bp CTGGGAAGTTTTCCTTCAACATCGTGCCTTACAGAGACTGGGGTTGACAGCTTACAGGGATGGCCCCCTTaGGAGAAAGCAAAGAAACCA +
Preference number: 3 (lower is better)
Translates to: LGSFPSTSCLTETGVDSLQGWPP*EKAKKP
Trigger: TGGTTTCTTTGCTTTCTCCAAAGGGGGCCATCCCTG...TAAGCTGTCAACCCCAGTCTCTGTAAGGCACGATGTTGAAGGAAAACTTCCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR-3UTR CAA 90 bp CTGGGAAGTTTTCCTTCAACATCGTGCCTTACAGAGACTGGGGTTGACAGCTTAATTTACACGTGCTGTTaGGCAGGGGATGGGAGTGGA +
Preference number: 3 (lower is better)
Translates to: LGSFPSTSCLTETGVDSLIYTCC*AGDGSG
Trigger: TCCACTCCCATCCCCTGCCAAACAGCACGTGTAAAT...TAAGCTGTCAACCCCAGTCTCTGTAAGGCACGATGTTGAAGGAAAACTTCCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR-3UTR CAA 90 bp TACACACACTACACAGTAATATATACAGAGAGAGATGCTGGCCTGAGCCAAGGCACAGAGCAGCAGGCCTaGGGAAAGAGGCCTGTTAAG +
Preference number: 3 (lower is better)
Translates to: YTHYTVIYTERDAGLSQGTEQQA*GKRPVK
Trigger: CTTAACAGGCCTCTTTCCCAAGGCCTGCTGCTCTGT...GCCTTGGCTCAGGCCAGCATCTCTCTCTGTATATATTACTGTGTAGTGTGTGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR TCA 72 bp CACTTTACTCACCTTTACTCAGAGCAAGAACACAGGTaGGACTTCTTAGGGGTAGGTTTCCCTGTCCGTGGG +
Preference number: 3 (lower is better)
Translates to: HFTHLYSEQEHR*DFLGVGFPVRG
Trigger: CCCACGGACAGGGAAACCTACCCCTAAGAAGTCTCACCTGTGTTCTTGCTCTGAGTAAAGGTGAGTAAAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR CCA 72 bp AATACATACGATCAGATACATTCGGCAGAGGGCATCTaGGTGACATGGAGCAAAGTGCTGGGATGGCAATGC +
Preference number: 3 (lower is better)
Translates to: NTYDQIHSAEGI*VTWSKVLGWQC
Trigger: GCATTGCCATCCCAGCACTTTGCTCCATGTCACCCAGATGCCCTCTGCCGAATGTATCTGATCGTATGTATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR-3UTR CAA 90 bp TACACACACTACACAGTAATATATACAGAGAGAGATGCTGGCCTGAGCCAAGGCAGGAAAGTTGTGCTGTaGCCTGTGACTCCTTGGGGA +
Preference number: 3 (lower is better)
Translates to: YTHYTVIYTERDAGLSQGRKVVL*PVTPWG
Trigger: TCCCCAAGGAGTCACAGGCAACAGCACAACTTTCCT...GCCTTGGCTCAGGCCAGCATCTCTCTCTGTATATATTACTGTGTAGTGTGTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR CCA 72 bp CAAGATAGAAATGAGCACAGCACCCAGAAGCAGGGATaGCCCCCTTTGGAGAAAGCAAAGAAACCACAACTT +
Preference number: 3 (lower is better)
Translates to: QDRNEHSTQKQG*PPLEKAKKPQL
Trigger: AAGTTGTGGTTTCTTTGCTTTCTCCAAAGGGGGCCATCCCTGCTTCTGGGTGCTGTGCTCATTTCTATCTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR-3UTR CAA 90 bp TACACACACTACACAGTAATATATACAGAGAGAGATGCTGGCCTGAGCCAAGGCCCCCGAAGCAAGGAGTaGTATAGAGACTGCTTTGAG +
Preference number: 3 (lower is better)
Translates to: YTHYTVIYTERDAGLSQGPRSKE*YRDCFE
Trigger: CTCAAAGCAGTCTCTATACAACTCCTTGCTTCGGGG...GCCTTGGCTCAGGCCAGCATCTCTCTCTGTATATATTACTGTGTAGTGTGTGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR GCA 72 bp CAGCTGTCAATTCTGGGAAGTTTTCCTTCAACATCGTaGCTTACAGAGACTGGGGTTGACAGCTTATTGCCT +
Preference number: 3 (lower is better)
Translates to: QLSILGSFPSTS*LTETGVDSLLP
Trigger: AGGCAATAAGCTGTCAACCCCAGTCTCTGTAAGGCACGATGTTGAAGGAAAACTTCCCAGAATTGACAGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR-3UTR CAA 90 bp CATCTTTTATTGGATACAGAACCAGAAATTCTGATGCCCGTGAATCCTTTTAAAGGGCTGAGTAAAGACTaGGGGGTTCCAGGCCAAGCC +
Preference number: 3 (lower is better)
Translates to: HLLLDTEPEILMPVNPFKGLSKD*GVPGQA
Trigger: GGCTTGGCCTGGAACCCCCAAGTCTTTACTCAGCCC...TTTAAAAGGATTCACGGGCATCAGAATTTCTGGTTCTGTATCCAATAAAAGATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR CCA 72 bp ACCAGGAACTATGTCTTTGGCACCAGCTGTCAATTCTaGGAAGTTTTCCTTCAACATCGTGCCTTACAGAGA +
Preference number: 3 (lower is better)
Translates to: TRNYVFGTSCQF*EVFLQHRALQR
Trigger: TCTCTGTAAGGCACGATGTTGAAGGAAAACTTCCCAGAATTGACAGCTGGTGCCAAAGACATAGTTCCTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR GCA 90 bp CAGGGCTGTGATAATGGCAGAGGTCCAGAGCTGGCCTCCTGGTGGGGTACCTGCCGGGAATCCAGAGGCTaGGGCGGCAGCGGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: QGCDNGRGPELASWWGTCRESRG*GGSGCS
Trigger: GCTGCAGCCGCTGCCGCCGCAGCCTCTGGATTCCCG...GCAGGTACCCCACCAGGAGGCCAGCTCTGGACCTCTGCCATTATCACAGCCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR GCA 90 bp CCCTGTCCGTGGGTCAGAATGCCTGGAACCAGCATCTTGGTCCTGCCTCCTGCCGGCAGCCCCGGGTGCTaGGGGCATACTCCTCCTTGC +
Preference number: 4 (lower is better)
Translates to: PCPWVRMPGTSILVLPPAGSPGC*GHTPPC
Trigger: GCAAGGAGGAGTATGCCCGCAGCACCCGGGGCTGCC...GGCAGGAGGCAGGACCAAGATGCTGGTTCCAGGCATTCTGACCCACGGACAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR CCA 90 bp CCCTGTCCGTGGGTCAGAATGCCTGGAACCAGCATCTTGGTCCTGCCTCCTGCCGTTGCAGCCGCAGCTTaGCACTGGCCTCCCGAGCTG +
Preference number: 4 (lower is better)
Translates to: PCPWVRMPGTSILVLPPAVAAAA*HWPPEL
Trigger: CAGCTCGGGAGGCCAGTGCCAAGCTGCGGCTGCAAC...GGCAGGAGGCAGGACCAAGATGCTGGTTCCAGGCATTCTGACCCACGGACAGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR CCA 90 bp CCCTGTCCGTGGGTCAGAATGCCTGGAACCAGCATCTTGGTCCTGCCTCCTGCCTGCCCAGGCTGGCACTaGGTGTGCTGCCACAGCTGC +
Preference number: 4 (lower is better)
Translates to: PCPWVRMPGTSILVLPPACPGWH*VCCHSC
Trigger: GCAGCTGTGGCAGCACACCCAGTGCCAGCCTGGGCA...GGCAGGAGGCAGGACCAAGATGCTGGTTCCAGGCATTCTGACCCACGGACAGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR CCA 90 bp CCCTGTCCGTGGGTCAGAATGCCTGGAACCAGCATCTTGGTCCTGCCTCCTGCCTGGAGGCCCCTGTGCTaGGAGAGGAGCCATGCCGTG +
Preference number: 4 (lower is better)
Translates to: PCPWVRMPGTSILVLPPAWRPLC*ERSHAV
Trigger: CACGGCATGGCTCCTCTCCCAGCACAGGGGCCTCCA...GGCAGGAGGCAGGACCAAGATGCTGGTTCCAGGCATTCTGACCCACGGACAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR CCA 90 bp CAGGGCTGTGATAATGGCAGAGGTCCAGAGCTGGCCTCCTGGTGGGGTACCTGCGCTCTGGGATGCAGCTaGCACACGACTGGAGGCCCC +
Preference number: 4 (lower is better)
Translates to: QGCDNGRGPELASWWGTCALGCS*HTTGGP
Trigger: GGGGCCTCCAGTCGTGTGCCAGCTGCATCCCAGAGC...GCAGGTACCCCACCAGGAGGCCAGCTCTGGACCTCTGCCATTATCACAGCCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR TCA 90 bp CATGCCCCAATTTACACGTGCTGTTTGGCAGGGGATGGGAGTGGAAGAGATGGCGGTAGCCTGGGCCCGTaGACCCAAGCCCCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: HAPIYTCCLAGDGSGRDGGSLGP*TQAPRA
Trigger: GGCCCTGGGGGCTTGGGTTCACGGGCCCAGGCTACC...GCCATCTCTTCCACTCCCATCCCCTGCCAAACAGCACGTGTAAATTGGGGCATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR TCA 90 bp GGAGAGGAAAGTTGTGCTGTTGCCTGTGACTCCTTGGGGACAAGGCTGGGGAGGGCAGGCAACGGTTGCTaGACCGGGTGGGCTGCTGGC +
Preference number: 4 (lower is better)
Translates to: GEESCAVACDSLGTRLGRAGNGC*TGWAAG
Trigger: GCCAGCAGCCCACCCGGTTCAGCAACCGTTGCCTGC...CCTCCCCAGCCTTGTCCCCAAGGAGTCACAGGCAACAGCACAACTTTCCTCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR CCA 90 bp CAGGGCTGTGATAATGGCAGAGGTCCAGAGCTGGCCTCCTGGTGGGGTACCTGCTGTAGCCGACCCACCTaGCCCGCGATCTTCTGCTCC +
Preference number: 4 (lower is better)
Translates to: QGCDNGRGPELASWWGTCCSRPT*PAIFCS
Trigger: GGAGCAGAAGATCGCGGGCCAGGTGGGTCGGCTACA...GCAGGTACCCCACCAGGAGGCCAGCTCTGGACCTCTGCCATTATCACAGCCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR CCA 90 bp GGAGAGGAAAGTTGTGCTGTTGCCTGTGACTCCTTGGGGACAAGGCTGGGGAGGCGAGGGCCCTTCCTCTaGCCGGGGCAGCTCCAGACT +
Preference number: 4 (lower is better)
Translates to: GEESCAVACDSLGTRLGRRGPFL*PGQLQT
Trigger: AGTCTGGAGCTGCCCCGGCCAGAGGAAGGGCCCTCG...CCTCCCCAGCCTTGTCCCCAAGGAGTCACAGGCAACAGCACAACTTTCCTCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR TCA 90 bp CCCTGTCCGTGGGTCAGAATGCCTGGAACCAGCATCTTGGTCCTGCCTCCTGCCCCAGGAGCTCCTCGATaGACTGTTGCAGCCGCAGCT +
Preference number: 4 (lower is better)
Translates to: PCPWVRMPGTSILVLPPAPGAPR*TVAAAA
Trigger: AGCTGCGGCTGCAACAGTTCATCGAGGAGCTCCTGG...GGCAGGAGGCAGGACCAAGATGCTGGTTCCAGGCATTCTGACCCACGGACAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR TCA 90 bp GACAACCAGCAGCAGGTGTGTCAGCTCCTTGCTGGCTGTACCAGCAGGCCATTCGGCCTGGGACCGCTCTaGACCACCGTTGGTAGCCTG +
Preference number: 4 (lower is better)
Translates to: DNQQQVCQLLAGCTSRPFGLGPL*TTVGSL
Trigger: CAGGCTACCAACGGTGGTTCAGAGCGGTCCCAGGCC...GAATGGCCTGCTGGTACAGCCAGCAAGGAGCTGACACACCTGCTGCTGGTTGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR TCA 90 bp GGAGAGGAAAGTTGTGCTGTTGCCTGTGACTCCTTGGGGACAAGGCTGGGGAGGTGGCACTCCTGTAGGTaGCAGCCTGCAGGGCACGGC +
Preference number: 4 (lower is better)
Translates to: GEESCAVACDSLGTRLGRWHSCR*QPAGHG
Trigger: GCCGTGCCCTGCAGGCTGTCACCTACAGGAGTGCCA...CCTCCCCAGCCTTGTCCCCAAGGAGTCACAGGCAACAGCACAACTTTCCTCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR TCA 90 bp CCACGTTCTGAGCAGAGGAATTCGGTTAGGTGTGCTCAGCCAGTGGGGCTTTGGGCAGGCAACGGTTGCTaGACCGGGTGGGCTGCTGGC +
Preference number: 4 (lower is better)
Translates to: PRSEQRNSVRCAQPVGLWAGNGC*TGWAAG
Trigger: GCCAGCAGCCCACCCGGTTCAGCAACCGTTGCCTGC...CCAAAGCCCCACTGGCTGAGCACACCTAACCGAATTCCTCTGCTCAGAACGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR GCA 90 bp CAGGGCTGTGATAATGGCAGAGGTCCAGAGCTGGCCTCCTGGTGGGGTACCTGCACTGGCCTCCCGAGCTaGCGTCTCCTTCAGGAACTG +
Preference number: 4 (lower is better)
Translates to: QGCDNGRGPELASWWGTCTGLPS*RLLQEL
Trigger: CAGTTCCTGAAGGAGACGGCAGCTCGGGAGGCCAGT...GCAGGTACCCCACCAGGAGGCCAGCTCTGGACCTCTGCCATTATCACAGCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR GCA 90 bp GGAGAGGAAAGTTGTGCTGTTGCCTGTGACTCCTTGGGGACAAGGCTGGGGAGGGACTGGAGGCCCCTGTaGTGGGAGAGGAGCCATGCC +
Preference number: 4 (lower is better)
Translates to: GEESCAVACDSLGTRLGRDWRPL*WERSHA
Trigger: GGCATGGCTCCTCTCCCAGCACAGGGGCCTCCAGTC...CCTCCCCAGCCTTGTCCCCAAGGAGTCACAGGCAACAGCACAACTTTCCTCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR GCA 90 bp CCAAGGCTGGATGAGAAAGCAGGGCCACCAAGGGCAGCGAGACTGCCAAGTCATCAGGGACTCCAGCCCTaGTTCAAGGCAGCCCCGGGT +
Preference number: 4 (lower is better)
Translates to: PRLDEKAGPPRAARLPSHQGLQP*FKAAPG
Trigger: ACCCGGGGCTGCCTTGAAGCAGGGCTGGAGTCCCTG...ATGACTTGGCAGTCTCGCTGCCCTTGGTGGCCCTGCTTTCTCATCCAGCCTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR CCA 90 bp CCACGTTCTGAGCAGAGGAATTCGGTTAGGTGTGCTCAGCCAGTGGGGCTTTGGGCCGCAGCTTGGCACTaGCCTCCCGAGCTGCCGTCT +
Preference number: 4 (lower is better)
Translates to: PRSEQRNSVRCAQPVGLWAAAWH*PPELPS
Trigger: AGACGGCAGCTCGGGAGGCCAGTGCCAAGCTGCGGC...CCAAAGCCCCACTGGCTGAGCACACCTAACCGAATTCCTCTGCTCAGAACGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR CCA 90 bp GACAACCAGCAGCAGGTGTGTCAGCTCCTTGCTGGCTGTACCAGCAGGCCATTCGTTGCAGCCGCAGCTTaGCACTGGCCTCCCGAGCTG +
Preference number: 4 (lower is better)
Translates to: DNQQQVCQLLAGCTSRPFVAAAA*HWPPEL
Trigger: CAGCTCGGGAGGCCAGTGCCAAGCTGCGGCTGCAAC...GAATGGCCTGCTGGTACAGCCAGCAAGGAGCTGACACACCTGCTGCTGGTTGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR TCA 90 bp CCCTGTCCGTGGGTCAGAATGCCTGGAACCAGCATCTTGGTCCTGCCTCCTGCCCAGGTCCTGCTTGAGTaGAGCCAGCAGTTCCACGCT +
Preference number: 4 (lower is better)
Translates to: PCPWVRMPGTSILVLPPAQVLLE*SQQFHA
Trigger: AGCGTGGAACTGCTGGCTTCACTCAAGCAGGACCTG...GGCAGGAGGCAGGACCAAGATGCTGGTTCCAGGCATTCTGACCCACGGACAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR TCA 90 bp CCCATTGGCTCTGTGACTGCTCAAGATAGAAATGAGCACAGCACCCAGAAGCAGGGTAGCCTGGGCCCGTaGACCCAAGCCCCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: PIGSVTAQDRNEHSTQKQGSLGP*TQAPRA
Trigger: GGCCCTGGGGGCTTGGGTTCACGGGCCCAGGCTACC...CTGCTTCTGGGTGCTGTGCTCATTTCTATCTTGAGCAGTCACAGAGCCAATGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR TCA 90 bp ATGAGAAAGCAGGGCCACCAAGGGCAGCGAGACTGCCAAGTCATCAAGCTGGTGGGCCTGGGACCGCTCTaGACCACCGTTGGTAGCCTG +
Preference number: 4 (lower is better)
Translates to: MRKQGHQGQRDCQVIKLVGLGPL*TTVGSL
Trigger: CAGGCTACCAACGGTGGTTCAGAGCGGTCCCAGGCC...CACCAGCTTGATGACTTGGCAGTCTCGCTGCCCTTGGTGGCCCTGCTTTCTCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR TCA 90 bp CCACGTTCTGAGCAGAGGAATTCGGTTAGGTGTGCTCAGCCAGTGGGGCTTTGGTGGCACTCCTGTAGGTaGCAGCCTGCAGGGCACGGC +
Preference number: 4 (lower is better)
Translates to: PRSEQRNSVRCAQPVGLWWHSCR*QPAGHG
Trigger: GCCGTGCCCTGCAGGCTGTCACCTACAGGAGTGCCA...CCAAAGCCCCACTGGCTGAGCACACCTAACCGAATTCCTCTGCTCAGAACGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR GCA 90 bp CCAAGGCTGGATGAGAAAGCAGGGCCACCAAGGGCAGCGAGACTGCCAAGTCATTGGCTGTACTCCAGGTaGGCGCGCAGCGACGATAGG +
Preference number: 4 (lower is better)
Translates to: PRLDEKAGPPRAARLPSHWLYSR*ARSDDR
Trigger: CCTATCGTCGCTGCGCGCGCACCTGGAGTACAGCCA...ATGACTTGGCAGTCTCGCTGCCCTTGGTGGCCCTGCTTTCTCATCCAGCCTTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR GCA 90 bp GGAGAGGAAAGTTGTGCTGTTGCCTGTGACTCCTTGGGGACAAGGCTGGGGAGGTGGCTGTACTCCAGGTaGGCGCGCAGCGACGATAGG +
Preference number: 4 (lower is better)
Translates to: GEESCAVACDSLGTRLGRWLYSR*ARSDDR
Trigger: CCTATCGTCGCTGCGCGCGCACCTGGAGTACAGCCA...CCTCCCCAGCCTTGTCCCCAAGGAGTCACAGGCAACAGCACAACTTTCCTCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR GCA 90 bp CCCTGTCCGTGGGTCAGAATGCCTGGAACCAGCATCTTGGTCCTGCCTCCTGCCCCGCGCCGTCGCAGATaGTGTTGGTCTTGGAAAGGA +
Preference number: 4 (lower is better)
Translates to: PCPWVRMPGTSILVLPPAPRRRR*CWSWKG
Trigger: TCCTTTCCAAGACCAACAGCATCTGCGACGGCGCGG...GGCAGGAGGCAGGACCAAGATGCTGGTTCCAGGCATTCTGACCCACGGACAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR GCA 90 bp CAGGGCTGTGATAATGGCAGAGGTCCAGAGCTGGCCTCCTGGTGGGGTACCTGCCCGCGCCGTCGCAGATaGTGTTGGTCTTGGAAAGGA +
Preference number: 4 (lower is better)
Translates to: QGCDNGRGPELASWWGTCPRRRR*CWSWKG
Trigger: TCCTTTCCAAGACCAACAGCATCTGCGACGGCGCGG...GCAGGTACCCCACCAGGAGGCCAGCTCTGGACCTCTGCCATTATCACAGCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR GCA 90 bp AAAGGTCTAGTCCAAGCCAGGGCCTCTCCAGAGGTCCAAAGAGCACTTGGTGTGGCGCTCGGCCCTGTCTaGACGCTCCAGGAGCTCCTC +
Preference number: 4 (lower is better)
Translates to: KGLVQARASPEVQRALGVALGPV*TLQELL
Trigger: GAGGAGCTCCTGGAGCGTGCAGACAGGGCCGAGCGC...CACACCAAGTGCTCTTTGGACCTCTGGAGAGGCCCTGGCTTGGACTAGACCTTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR GCA 90 bp GGAGAGGAAAGTTGTGCTGTTGCCTGTGACTCCTTGGGGACAAGGCTGGGGAGGCTGCTGCTGATGACCTaGAACTGGCGCTCGGCCCTG +
Preference number: 4 (lower is better)
Translates to: GEESCAVACDSLGTRLGRLLLMT*NWRSAL
Trigger: CAGGGCCGAGCGCCAGTTGCAGGTCATCAGCAGCAG...CCTCCCCAGCCTTGTCCCCAAGGAGTCACAGGCAACAGCACAACTTTCCTCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR GCA 90 bp GCCTGTGTTCTGCATTCAAGATCAGGGCTGGTGACAGAGCAGCAGGCCTTGGGACAGGGACTCCAGCCCTaGTTCAAGGCAGCCCCGGGT +
Preference number: 4 (lower is better)
Translates to: ACVLHSRSGLVTEQQALGQGLQP*FKAAPG
Trigger: ACCCGGGGCTGCCTTGAAGCAGGGCTGGAGTCCCTG...TCCCAAGGCCTGCTGCTCTGTCACCAGCCCTGATCTTGAATGCAGAACACAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR GCA 90 bp ATGAGAAAGCAGGGCCACCAAGGGCAGCGAGACTGCCAAGTCATCAAGCTGGTGCAGGGACTCCAGCCCTaGTTCAAGGCAGCCCCGGGT +
Preference number: 4 (lower is better)
Translates to: MRKQGHQGQRDCQVIKLVQGLQP*FKAAPG
Trigger: ACCCGGGGCTGCCTTGAAGCAGGGCTGGAGTCCCTG...CACCAGCTTGATGACTTGGCAGTCTCGCTGCCCTTGGTGGCCCTGCTTTCTCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR CCA 90 bp CATGCCCCAATTTACACGTGCTGTTTGGCAGGGGATGGGAGTGGAAGAGATGGCGCCGCAGCTTGGCACTaGCCTCCCGAGCTGCCGTCT +
Preference number: 4 (lower is better)
Translates to: HAPIYTCCLAGDGSGRDGAAAWH*PPELPS
Trigger: AGACGGCAGCTCGGGAGGCCAGTGCCAAGCTGCGGC...GCCATCTCTTCCACTCCCATCCCCTGCCAAACAGCACGTGTAAATTGGGGCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR CCA 90 bp CCACGTTCTGAGCAGAGGAATTCGGTTAGGTGTGCTCAGCCAGTGGGGCTTTGGTGGAGGCCCCTGTGCTaGGAGAGGAGCCATGCCGTG +
Preference number: 4 (lower is better)
Translates to: PRSEQRNSVRCAQPVGLWWRPLC*ERSHAV
Trigger: CACGGCATGGCTCCTCTCCCAGCACAGGGGCCTCCA...CCAAAGCCCCACTGGCTGAGCACACCTAACCGAATTCCTCTGCTCAGAACGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR CCA 90 bp AAAGGTCTAGTCCAAGCCAGGGCCTCTCCAGAGGTCCAAAGAGCACTTGGTGTGCGAGGGCCCTTCCTCTaGCCGGGGCAGCTCCAGACT +
Preference number: 4 (lower is better)
Translates to: KGLVQARASPEVQRALGVRGPFL*PGQLQT
Trigger: AGTCTGGAGCTGCCCCGGCCAGAGGAAGGGCCCTCG...CACACCAAGTGCTCTTTGGACCTCTGGAGAGGCCCTGGCTTGGACTAGACCTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR CCA 90 bp CCCTGTCCGTGGGTCAGAATGCCTGGAACCAGCATCTTGGTCCTGCCTCCTGCCCGGCGTTGCCAGTTCTaGATGGCCTGTCGTCTTAGG +
Preference number: 4 (lower is better)
Translates to: PCPWVRMPGTSILVLPPARRCQF*MACRLR
Trigger: CCTAAGACGACAGGCCATCCAGAACTGGCAACGCCG...GGCAGGAGGCAGGACCAAGATGCTGGTTCCAGGCATTCTGACCCACGGACAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR CCA 90 bp CAGGGCTGTGATAATGGCAGAGGTCCAGAGCTGGCCTCCTGGTGGGGTACCTGCCTCCGACGCAGGGCCTaGAGTTTTGTCACCATGTCC +
Preference number: 4 (lower is better)
Translates to: QGCDNGRGPELASWWGTCLRRRA*SFVTMS
Trigger: GGACATGGTGACAAAACTCCAGGCCCTGCGTCGGAG...GCAGGTACCCCACCAGGAGGCCAGCTCTGGACCTCTGCCATTATCACAGCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR CAA 72 bp TGGCAAGTGGCTGCCACCTGTGAGCCTTCTTCTCCATaGACCCAGTGCTTCTGGAGCAGGGCATGCCCACGC +
Preference number: 4 (lower is better)
Translates to: WQVAATCEPSSP*TQCFWSRACPR
Trigger: GCGTGGGCATGCCCTGCTCCAGAAGCACTGGGTCAATGGAGAAGAAGGCTCACAGGTGGCAGCCACTTGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR TCA 90 bp GACAACCAGCAGCAGGTGTGTCAGCTCCTTGCTGGCTGTACCAGCAGGCCATTCGGGTCCTTCAGCCTCTaGCTCAGTAGTTCGGGAGCC +
Preference number: 4 (lower is better)
Translates to: DNQQQVCQLLAGCTSRPFGSFSL*LSSSGA
Trigger: GGCTCCCGAACTACTGAGTCAGAGGCTGAAGGACCC...GAATGGCCTGCTGGTACAGCCAGCAAGGAGCTGACACACCTGCTGCTGGTTGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR TCA 90 bp CCACGTTCTGAGCAGAGGAATTCGGTTAGGTGTGCTCAGCCAGTGGGGCTTTGGGCCTGGGTGCACCACTaGGCCAACATCGCCAGGAAC +
Preference number: 4 (lower is better)
Translates to: PRSEQRNSVRCAQPVGLWAWVHH*ANIARN
Trigger: GTTCCTGGCGATGTTGGCTCAGTGGTGCACCCAGGC...CCAAAGCCCCACTGGCTGAGCACACCTAACCGAATTCCTCTGCTCAGAACGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR TCA 90 bp GCCTGTGTTCTGCATTCAAGATCAGGGCTGGTGACAGAGCAGCAGGCCTTGGGAGCCTGGGTGCACCACTaGGCCAACATCGCCAGGAAC +
Preference number: 4 (lower is better)
Translates to: ACVLHSRSGLVTEQQALGAWVHH*ANIARN
Trigger: GTTCCTGGCGATGTTGGCTCAGTGGTGCACCCAGGC...TCCCAAGGCCTGCTGCTCTGTCACCAGCCCTGATCTTGAATGCAGAACACAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR GCA 90 bp GAGCAAGCCACGCAACTCAGCGATGATGATAAACTGGGACAGGGCTATAGGATCCGGGAATCCAGAGGCTaGGGCGGCAGCGGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: EQATQLSDDDKLGQGYRIRESRG*GGSGCS
Trigger: GCTGCAGCCGCTGCCGCCGCAGCCTCTGGATTCCCG...GATCCTATAGCCCTGTCCCAGTTTATCATCATCGCTGAGTTGCGTGGCTTGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR GCA 90 bp GACAACCAGCAGCAGGTGTGTCAGCTCCTTGCTGGCTGTACCAGCAGGCCATTCCGGTCGCCTGTTCCTTaGCCTGGAAGGACGTGCTCT +
Preference number: 4 (lower is better)
Translates to: DNQQQVCQLLAGCTSRPFRSPVP*PGRTCS
Trigger: AGAGCACGTCCTTCCAGGGCAAGGAACAGGCGACCG...GAATGGCCTGCTGGTACAGCCAGCAAGGAGCTGACACACCTGCTGCTGGTTGTC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR GCA 90 bp GGAGAGGAAAGTTGTGCTGTTGCCTGTGACTCCTTGGGGACAAGGCTGGGGAGGCGGTCGCCTGTTCCTTaGCCTGGAAGGACGTGCTCT +
Preference number: 4 (lower is better)
Translates to: GEESCAVACDSLGTRLGRRSPVP*PGRTCS
Trigger: AGAGCACGTCCTTCCAGGGCAAGGAACAGGCGACCG...CCTCCCCAGCCTTGTCCCCAAGGAGTCACAGGCAACAGCACAACTTTCCTCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR GCA 90 bp GGAGAGGAAAGTTGTGCTGTTGCCTGTGACTCCTTGGGGACAAGGCTGGGGAGGGCGGATCTTAAGGCGTaGCAGGCCCTCTTCGTAGGC +
Preference number: 4 (lower is better)
Translates to: GEESCAVACDSLGTRLGRADLKA*QALFVG
Trigger: GCCTACGAAGAGGGCCTGGCACGCCTTAAGATCCGC...CCTCCCCAGCCTTGTCCCCAAGGAGTCACAGGCAACAGCACAACTTTCCTCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR GCA 90 bp GACAACCAGCAGCAGGTGTGTCAGCTCCTTGCTGGCTGTACCAGCAGGCCATTCCCACCTCCTGCTGCTTaGGGCTCAGCTCCTGTTCCT +
Preference number: 4 (lower is better)
Translates to: DNQQQVCQLLAGCTSRPFPPPAA*GSAPVP
Trigger: AGGAACAGGAGCTGAGCCGCAAGCAGCAGGAGGTGG...GAATGGCCTGCTGGTACAGCCAGCAAGGAGCTGACACACCTGCTGCTGGTTGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR GCA 90 bp CCAAGGCTGGATGAGAAAGCAGGGCCACCAAGGGCAGCGAGACTGCCAAGTCATTGCACCACCTCCTGCTaGTTGCGGCTCAGCTCCTGT +
Preference number: 4 (lower is better)
Translates to: PRLDEKAGPPRAARLPSHCTTSC*LRLSSC
Trigger: ACAGGAGCTGAGCCGCAAGCAGCAGGAGGTGGTGCA...ATGACTTGGCAGTCTCGCTGCCCTTGGTGGCCCTGCTTTCTCATCCAGCCTTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR GCA 90 bp CCCATTGGCTCTGTGACTGCTCAAGATAGAAATGAGCACAGCACCCAGAAGCAGCAGGCCCCGAGGCACTaGCCCCACCTCCTCTGCCCA +
Preference number: 4 (lower is better)
Translates to: PIGSVTAQDRNEHSTQKQQAPRH*PHLLCP
Trigger: TGGGCAGAGGAGGTGGGGGCAGTGCCTCGGGGCCTG...CTGCTTCTGGGTGCTGTGCTCATTTCTATCTTGAGCAGTCACAGAGCCAATGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR GCA 90 bp CCAAGGCTGGATGAGAAAGCAGGGCCACCAAGGGCAGCGAGACTGCCAAGTCATCGACGAGGTCGGCGTTaGCAGTTCTGGATGGCCTGT +
Preference number: 4 (lower is better)
Translates to: PRLDEKAGPPRAARLPSHRRGRR*QFWMAC
Trigger: ACAGGCCATCCAGAACTGGCAACGCCGACCTCGTCG...ATGACTTGGCAGTCTCGCTGCCCTTGGTGGCCCTGCTTTCTCATCCAGCCTTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR GCA 90 bp CATGCCCCAATTTACACGTGCTGTTTGGCAGGGGATGGGAGTGGAAGAGATGGCCAAGGCAGCCCCGGGTaGTGCGGGCATACTCCTCCT +
Preference number: 4 (lower is better)
Translates to: HAPIYTCCLAGDGSGRDGQGSPG*CGHTPP
Trigger: AGGAGGAGTATGCCCGCAGCACCCGGGGCTGCCTTG...GCCATCTCTTCCACTCCCATCCCCTGCCAAACAGCACGTGTAAATTGGGGCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR GCA 90 bp ATACAGATGGGTTTGCACCCAGTCCAGGGTGTGGCACAGCTGGAGAAAACTGGCCAAGGCAGCCCCGGGTaGTGCGGGCATACTCCTCCT +
Preference number: 4 (lower is better)
Translates to: IQMGLHPVQGVAQLEKTGQGSPG*CGHTPP
Trigger: AGGAGGAGTATGCCCGCAGCACCCGGGGCTGCCTTG...GCCAGTTTTCTCCAGCTGTGCCACACCCTGGACTGGGTGCAAACCCATCTGTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR CCA 90 bp CCCTGTCCGTGGGTCAGAATGCCTGGAACCAGCATCTTGGTCCTGCCTCCTGCCGCCTGTTCCTTGCCCTaGAAGGACGTGCTCTCAAAG +
Preference number: 4 (lower is better)
Translates to: PCPWVRMPGTSILVLPPAACSLP*KDVLSK
Trigger: CTTTGAGAGCACGTCCTTCCAGGGCAAGGAACAGGC...GGCAGGAGGCAGGACCAAGATGCTGGTTCCAGGCATTCTGACCCACGGACAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR CCA 90 bp CCAAGGCTGGATGAGAAAGCAGGGCCACCAAGGGCAGCGAGACTGCCAAGTCATACGCTCACGTCCACTTaGCGTGAGAGCTCAGAGGCG +
Preference number: 4 (lower is better)
Translates to: PRLDEKAGPPRAARLPSHTLTST*RESSEA
Trigger: CGCCTCTGAGCTCTCACGCCAAGTGGACGTGAGCGT...ATGACTTGGCAGTCTCGCTGCCCTTGGTGGCCCTGCTTTCTCATCCAGCCTTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR CCA 90 bp ATACAGATGGGTTTGCACCCAGTCCAGGGTGTGGCACAGCTGGAGAAAACTGGCGTTGCAGCCGCAGCTTaGCACTGGCCTCCCGAGCTG +
Preference number: 4 (lower is better)
Translates to: IQMGLHPVQGVAQLEKTGVAAAA*HWPPEL
Trigger: CAGCTCGGGAGGCCAGTGCCAAGCTGCGGCTGCAAC...GCCAGTTTTCTCCAGCTGTGCCACACCCTGGACTGGGTGCAAACCCATCTGTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR CCA 90 bp ATACAGATGGGTTTGCACCCAGTCCAGGGTGTGGCACAGCTGGAGAAAACTGGCTGCCCAGGCTGGCACTaGGTGTGCTGCCACAGCTGC +
Preference number: 4 (lower is better)
Translates to: IQMGLHPVQGVAQLEKTGCPGWH*VCCHSC
Trigger: GCAGCTGTGGCAGCACACCCAGTGCCAGCCTGGGCA...GCCAGTTTTCTCCAGCTGTGCCACACCCTGGACTGGGTGCAAACCCATCTGTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR CCA 90 bp TCCGCATGCCTGAAGACTAAGATGCCCAAGACTCAGCCAGGACACAGTGACCTGCTCCTCTGCCCAGGCTaGCACTGGGTGTGCTGCCAC +
Preference number: 4 (lower is better)
Translates to: SACLKTKMPKTQPGHSDLLLCPG*HWVCCH
Trigger: GTGGCAGCACACCCAGTGCCAGCCTGGGCAGAGGAG...CAGGTCACTGTGTCCTGGCTGAGTCTTGGGCATCTTAGTCTTCAGGCATGCGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR CCA 90 bp CAGGGCTGTGATAATGGCAGAGGTCCAGAGCTGGCCTCCTGGTGGGGTACCTGCAGGATGTTGGGGCAGTaGGAGATTCGCAGGATCAGC +
Preference number: 4 (lower is better)
Translates to: QGCDNGRGPELASWWGTCRMLGQ*EIRRIS
Trigger: GCTGATCCTGCGAATCTCCCACTGCCCCAACATCCT...GCAGGTACCCCACCAGGAGGCCAGCTCTGGACCTCTGCCATTATCACAGCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR CCA 90 bp GGAGAGGAAAGTTGTGCTGTTGCCTGTGACTCCTTGGGGACAAGGCTGGGGAGGTCCTCAAACAGCTTCTaGGCCTCGGGACTGCTGGGC +
Preference number: 4 (lower is better)
Translates to: GEESCAVACDSLGTRLGRSSNSF*ASGLLG
Trigger: GCCCAGCAGTCCCGAGGCCCAGAAGCTGTTTGAGGA...CCTCCCCAGCCTTGTCCCCAAGGAGTCACAGGCAACAGCACAACTTTCCTCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR CCA 90 bp CCAAGGCTGGATGAGAAAGCAGGGCCACCAAGGGCAGCGAGACTGCCAAGTCATTCCTCAAACAGCTTCTaGGCCTCGGGACTGCTGGGC +
Preference number: 4 (lower is better)
Translates to: PRLDEKAGPPRAARLPSHSSNSF*ASGLLG
Trigger: GCCCAGCAGTCCCGAGGCCCAGAAGCTGTTTGAGGA...ATGACTTGGCAGTCTCGCTGCCCTTGGTGGCCCTGCTTTCTCATCCAGCCTTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR TCA 90 bp CCAAGGCTGGATGAGAAAGCAGGGCCACCAAGGGCAGCGAGACTGCCAAGTCATACTGTCATAGCAGCCTaGGCTCTGGGATGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: PRLDEKAGPPRAARLPSHTVIAA*ALGCSW
Trigger: CCAGCTGCATCCCAGAGCTCAGGCTGCTATGACAGT...ATGACTTGGCAGTCTCGCTGCCCTTGGTGGCCCTGCTTTCTCATCCAGCCTTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR TCA 90 bp CTGGGAAGTTTTCCTTCAACATCGTGCCTTACAGAGACTGGGGTTGACAGCTTAGGTAGCCTGGGCCCGTaGACCCAAGCCCCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: LGSFPSTSCLTETGVDSLGSLGP*TQAPRA
Trigger: GGCCCTGGGGGCTTGGGTTCACGGGCCCAGGCTACC...TAAGCTGTCAACCCCAGTCTCTGTAAGGCACGATGTTGAAGGAAAACTTCCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR TCA 90 bp ATGAGAAAGCAGGGCCACCAAGGGCAGCGAGACTGCCAAGTCATCAAGCTGGTGGACCTCATTGGAGCGTaGGGGGCTACCTCTCTCCAC +
Preference number: 4 (lower is better)
Translates to: MRKQGHQGQRDCQVIKLVDLIGA*GATSLH
Trigger: GTGGAGAGAGGTAGCCCCTCACGCTCCAATGAGGTC...CACCAGCTTGATGACTTGGCAGTCTCGCTGCCCTTGGTGGCCCTGCTTTCTCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR GCA 90 bp CCCATTGGCTCTGTGACTGCTCAAGATAGAAATGAGCACAGCACCCAGAAGCAGCTCCGGAAGCGCTTATaGTCCCCGCAGCGCGGGCAG +
Preference number: 4 (lower is better)
Translates to: PIGSVTAQDRNEHSTQKQLRKRL*SPQRGQ
Trigger: CTGCCCGCGCTGCGGGGAGCATAAGCGCTTCCGGAG...CTGCTTCTGGGTGCTGTGCTCATTTCTATCTTGAGCAGTCACAGAGCCAATGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR GCA 90 bp CAGCAATGGAAGGGACTTGTGTGGCAGCAACATACAGATGGGTTTGCACCCAGTCTCCGGAAGCGCTTATaGTCCCCGCAGCGCGGGCAG +
Preference number: 4 (lower is better)
Translates to: QQWKGLVWQQHTDGFAPSLRKRL*SPQRGQ
Trigger: CTGCCCGCGCTGCGGGGAGCATAAGCGCTTCCGGAG...ACTGGGTGCAAACCCATCTGTATGTTGCTGCCACACAAGTCCCTTCCATTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR GCA 90 bp ACAGGGAGCAGGAGCTACATGGATGCAGCTGGCAAAACAACTGACCTACTAAAGCGGGAATCCAGAGGCTaGGGCGGCAGCGGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: TGSRSYMDAAGKTTDLLKRESRG*GGSGCS
Trigger: GCTGCAGCCGCTGCCGCCGCAGCCTCTGGATTCCCG...CTTTAGTAGGTCAGTTGTTTTGCCAGCTGCATCCATGTAGCTCCTGCTCCCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR GCA 90 bp CCACGTTCTGAGCAGAGGAATTCGGTTAGGTGTGCTCAGCCAGTGGGGCTTTGGGCGGATCTTAAGGCGTaGCAGGCCCTCTTCGTAGGC +
Preference number: 4 (lower is better)
Translates to: PRSEQRNSVRCAQPVGLWADLKA*QALFVG
Trigger: GCCTACGAAGAGGGCCTGGCACGCCTTAAGATCCGC...CCAAAGCCCCACTGGCTGAGCACACCTAACCGAATTCCTCTGCTCAGAACGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR GCA 90 bp GCCTGTGTTCTGCATTCAAGATCAGGGCTGGTGACAGAGCAGCAGGCCTTGGGAACTGGCCTCCCGAGCTaGCGTCTCCTTCAGGAACTG +
Preference number: 4 (lower is better)
Translates to: ACVLHSRSGLVTEQQALGTGLPS*RLLQEL
Trigger: CAGTTCCTGAAGGAGACGGCAGCTCGGGAGGCCAGT...TCCCAAGGCCTGCTGCTCTGTCACCAGCCCTGATCTTGAATGCAGAACACAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR GCA 90 bp GAGCAAGCCACGCAACTCAGCGATGATGATAAACTGGGACAGGGCTATAGGATCGCGCTCGGCCCTGTCTaGACGCTCCAGGAGCTCCTC +
Preference number: 4 (lower is better)
Translates to: EQATQLSDDDKLGQGYRIALGPV*TLQELL
Trigger: GAGGAGCTCCTGGAGCGTGCAGACAGGGCCGAGCGC...GATCCTATAGCCCTGTCCCAGTTTATCATCATCGCTGAGTTGCGTGGCTTGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR GCA 90 bp ATACAGATGGGTTTGCACCCAGTCCAGGGTGTGGCACAGCTGGAGAAAACTGGCCTGCTGCTGATGACCTaGAACTGGCGCTCGGCCCTG +
Preference number: 4 (lower is better)
Translates to: IQMGLHPVQGVAQLEKTGLLLMT*NWRSAL
Trigger: CAGGGCCGAGCGCCAGTTGCAGGTCATCAGCAGCAG...GCCAGTTTTCTCCAGCTGTGCCACACCCTGGACTGGGTGCAAACCCATCTGTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR GCA 90 bp ATGAGAAAGCAGGGCCACCAAGGGCAGCGAGACTGCCAAGTCATCAAGCTGGTGCCGACAGACCTCTGCTaGATGGAGCAGTGTCCGGGT +
Preference number: 4 (lower is better)
Translates to: MRKQGHQGQRDCQVIKLVPTDLC*MEQCPG
Trigger: ACCCGGACACTGCTCCATGCAGCAGAGGTCTGTCGG...CACCAGCTTGATGACTTGGCAGTCTCGCTGCCCTTGGTGGCCCTGCTTTCTCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR GCA 90 bp GAGCAAGCCACGCAACTCAGCGATGATGATAAACTGGGACAGGGCTATAGGATCGGCAGCCCCGGGTGCTaGGGGCATACTCCTCCTTGC +
Preference number: 4 (lower is better)
Translates to: EQATQLSDDDKLGQGYRIGSPGC*GHTPPC
Trigger: GCAAGGAGGAGTATGCCCGCAGCACCCGGGGCTGCC...GATCCTATAGCCCTGTCCCAGTTTATCATCATCGCTGAGTTGCGTGGCTTGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR CCA 90 bp GCCTGTGTTCTGCATTCAAGATCAGGGCTGGTGACAGAGCAGCAGGCCTTGGGAACGCTCACGTCCACTTaGCGTGAGAGCTCAGAGGCG +
Preference number: 4 (lower is better)
Translates to: ACVLHSRSGLVTEQQALGTLTST*RESSEA
Trigger: CGCCTCTGAGCTCTCACGCCAAGTGGACGTGAGCGT...TCCCAAGGCCTGCTGCTCTGTCACCAGCCCTGATCTTGAATGCAGAACACAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR CCA 90 bp CAAGATAGAAATGAGCACAGCACCCAGAAGCAGGGATGGCCCCCTTTGGAGAAAGCCGCAGCTTGGCACTaGCCTCCCGAGCTGCCGTCT +
Preference number: 4 (lower is better)
Translates to: QDRNEHSTQKQGWPPLEKAAAWH*PPELPS
Trigger: AGACGGCAGCTCGGGAGGCCAGTGCCAAGCTGCGGC...TTTCTCCAAAGGGGGCCATCCCTGCTTCTGGGTGCTGTGCTCATTTCTATCTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR CCA 90 bp ATACAGATGGGTTTGCACCCAGTCCAGGGTGTGGCACAGCTGGAGAAAACTGGCGAACTACGAGGGGCCTaGGACCGCTCTGAACCACCG +
Preference number: 4 (lower is better)
Translates to: IQMGLHPVQGVAQLEKTGELRGA*DRSEPP
Trigger: CGGTGGTTCAGAGCGGTCCCAGGCCCCTCGTAGTTC...GCCAGTTTTCTCCAGCTGTGCCACACCCTGGACTGGGTGCAAACCCATCTGTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR CCA 90 bp GAGCAAGCCACGCAACTCAGCGATGATGATAAACTGGGACAGGGCTATAGGATCCCCAGGGCCCGGAGGTaGGGCCAACAGCGTCCAATC +
Preference number: 4 (lower is better)
Translates to: EQATQLSDDDKLGQGYRIPRARR*GQQRPI
Trigger: GATTGGACGCTGTTGGCCCCACCTCCGGGCCCTGGG...GATCCTATAGCCCTGTCCCAGTTTATCATCATCGCTGAGTTGCGTGGCTTGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR CCA 90 bp CAGCAATGGAAGGGACTTGTGTGGCAGCAACATACAGATGGGTTTGCACCCAGTCCCAGGGCCCGGAGGTaGGGCCAACAGCGTCCAATC +
Preference number: 4 (lower is better)
Translates to: QQWKGLVWQQHTDGFAPSPRARR*GQQRPI
Trigger: GATTGGACGCTGTTGGCCCCACCTCCGGGCCCTGGG...ACTGGGTGCAAACCCATCTGTATGTTGCTGCCACACAAGTCCCTTCCATTGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR CCA 90 bp GGAGAGGAAAGTTGTGCTGTTGCCTGTGACTCCTTGGGGACAAGGCTGGGGAGGCTCCGACGCAGGGCCTaGAGTTTTGTCACCATGTCC +
Preference number: 4 (lower is better)
Translates to: GEESCAVACDSLGTRLGRLRRRA*SFVTMS
Trigger: GGACATGGTGACAAAACTCCAGGCCCTGCGTCGGAG...CCTCCCCAGCCTTGTCCCCAAGGAGTCACAGGCAACAGCACAACTTTCCTCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR TCA 90 bp AAAGGTCTAGTCCAAGCCAGGGCCTCTCCAGAGGTCCAAAGAGCACTTGGTGTGCCAGGAGCTCCTCGATaGACTGTTGCAGCCGCAGCT +
Preference number: 4 (lower is better)
Translates to: KGLVQARASPEVQRALGVPGAPR*TVAAAA
Trigger: AGCTGCGGCTGCAACAGTTCATCGAGGAGCTCCTGG...CACACCAAGTGCTCTTTGGACCTCTGGAGAGGCCCTGGCTTGGACTAGACCTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR TCA 90 bp GACAACCAGCAGCAGGTGTGTCAGCTCCTTGCTGGCTGTACCAGCAGGCCATTCTGTGCTTGGCACAGCTaGGCCTGCATGATGTTCTCG +
Preference number: 4 (lower is better)
Translates to: DNQQQVCQLLAGCTSRPFCAWHS*ACMMFS
Trigger: CGAGAACATCATGCAGGCTCAGCTGTGCCAAGCACA...GAATGGCCTGCTGGTACAGCCAGCAAGGAGCTGACACACCTGCTGCTGGTTGTC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR GCA 90 bp CATGCCCCAATTTACACGTGCTGTTTGGCAGGGGATGGGAGTGGAAGAGATGGCAGGATGCCACGGACTTaGGCGCAAACAGCTCGCCGA +
Preference number: 4 (lower is better)
Translates to: HAPIYTCCLAGDGSGRDGRMPRT*AQTARR
Trigger: TCGGCGAGCTGTTTGCGCGCAAGTCCGTGGCATCCT...GCCATCTCTTCCACTCCCATCCCCTGCCAAACAGCACGTGTAAATTGGGGCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR GCA 90 bp ATACAGATGGGTTTGCACCCAGTCCAGGGTGTGGCACAGCTGGAGAAAACTGGCAGGATGCCACGGACTTaGGCGCAAACAGCTCGCCGA +
Preference number: 4 (lower is better)
Translates to: IQMGLHPVQGVAQLEKTGRMPRT*AQTARR
Trigger: TCGGCGAGCTGTTTGCGCGCAAGTCCGTGGCATCCT...GCCAGTTTTCTCCAGCTGTGCCACACCCTGGACTGGGTGCAAACCCATCTGTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR GCA 90 bp CAGGGCTGTGATAATGGCAGAGGTCCAGAGCTGGCCTCCTGGTGGGGTACCTGCTTATGCACCAGGTCCTaGTTGAGTGAAGCCAGCAGT +
Preference number: 4 (lower is better)
Translates to: QGCDNGRGPELASWWGTCLCTRS*LSEASS
Trigger: ACTGCTGGCTTCACTCAAGCAGGACCTGGTGCATAA...GCAGGTACCCCACCAGGAGGCCAGCTCTGGACCTCTGCCATTATCACAGCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR GCA 90 bp AAAGGTCTAGTCCAAGCCAGGGCCTCTCCAGAGGTCCAAAGAGCACTTGGTGTGCCACCTCCTGCTGCTTaGGGCTCAGCTCCTGTTCCT +
Preference number: 4 (lower is better)
Translates to: KGLVQARASPEVQRALGVPPPAA*GSAPVP
Trigger: AGGAACAGGAGCTGAGCCGCAAGCAGCAGGAGGTGG...CACACCAAGTGCTCTTTGGACCTCTGGAGAGGCCCTGGCTTGGACTAGACCTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR GCA 90 bp GCCTGTGTTCTGCATTCAAGATCAGGGCTGGTGACAGAGCAGCAGGCCTTGGGACTGGGAGAGGAGCCATaGCGTGATACGGCGTATGTG +
Preference number: 4 (lower is better)
Translates to: ACVLHSRSGLVTEQQALGLGEEP*RDTAYV
Trigger: CACATACGCCGTATCACGGCATGGCTCCTCTCCCAG...TCCCAAGGCCTGCTGCTCTGTCACCAGCCCTGATCTTGAATGCAGAACACAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR GCA 90 bp CATGCCCCAATTTACACGTGCTGTTTGGCAGGGGATGGGAGTGGAAGAGATGGCCCGACAGACCTCTGCTaGATGGAGCAGTGTCCGGGT +
Preference number: 4 (lower is better)
Translates to: HAPIYTCCLAGDGSGRDGPTDLC*MEQCPG
Trigger: ACCCGGACACTGCTCCATGCAGCAGAGGTCTGTCGG...GCCATCTCTTCCACTCCCATCCCCTGCCAAACAGCACGTGTAAATTGGGGCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR GCA 90 bp ATACAGATGGGTTTGCACCCAGTCCAGGGTGTGGCACAGCTGGAGAAAACTGGCCCGACAGACCTCTGCTaGATGGAGCAGTGTCCGGGT +
Preference number: 4 (lower is better)
Translates to: IQMGLHPVQGVAQLEKTGPTDLC*MEQCPG
Trigger: ACCCGGACACTGCTCCATGCAGCAGAGGTCTGTCGG...GCCAGTTTTCTCCAGCTGTGCCACACCCTGGACTGGGTGCAAACCCATCTGTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR GCA 90 bp CCACGTTCTGAGCAGAGGAATTCGGTTAGGTGTGCTCAGCCAGTGGGGCTTTGGACGAGTGAGCCTGGGTaGACCACTGAGCCAACATCG +
Preference number: 4 (lower is better)
Translates to: PRSEQRNSVRCAQPVGLWTSEPG*TTEPTS
Trigger: CGATGTTGGCTCAGTGGTGCACCCAGGCTCACTCGT...CCAAAGCCCCACTGGCTGAGCACACCTAACCGAATTCCTCTGCTCAGAACGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR GCA 90 bp CAAGATAGAAATGAGCACAGCACCCAGAAGCAGGGATGGCCCCCTTTGGAGAAACAAGGCAGCCCCGGGTaGTGCGGGCATACTCCTCCT +
Preference number: 4 (lower is better)
Translates to: QDRNEHSTQKQGWPPLEKQGSPG*CGHTPP
Trigger: AGGAGGAGTATGCCCGCAGCACCCGGGGCTGCCTTG...TTTCTCCAAAGGGGGCCATCCCTGCTTCTGGGTGCTGTGCTCATTTCTATCTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR GCA 90 bp TCCGCATGCCTGAAGACTAAGATGCCCAAGACTCAGCCAGGACACAGTGACCTGCAGGTTCCCACCAGCTaGCTTCAGCAGGGACTCCAG +
Preference number: 4 (lower is better)
Translates to: SACLKTKMPKTQPGHSDLQVPTS*LQQGLQ
Trigger: CTGGAGTCCCTGCTGAAGGCAGCTGGTGGGAACCTG...CAGGTCACTGTGTCCTGGCTGAGTCTTGGGCATCTTAGTCTTCAGGCATGCGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR CCA 90 bp CCAAGGCTGGATGAGAAAGCAGGGCCACCAAGGGCAGCGAGACTGCCAAGTCATGCCTGTTCCTTGCCCTaGAAGGACGTGCTCTCAAAG +
Preference number: 4 (lower is better)
Translates to: PRLDEKAGPPRAARLPSHACSLP*KDVLSK
Trigger: CTTTGAGAGCACGTCCTTCCAGGGCAAGGAACAGGC...ATGACTTGGCAGTCTCGCTGCCCTTGGTGGCCCTGCTTTCTCATCCAGCCTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR CCA 90 bp CAGCAATGGAAGGGACTTGTGTGGCAGCAACATACAGATGGGTTTGCACCCAGTCTCCTCTGCCCAGGCTaGCACTGGGTGTGCTGCCAC +
Preference number: 4 (lower is better)
Translates to: QQWKGLVWQQHTDGFAPSLLCPG*HWVCCH
Trigger: GTGGCAGCACACCCAGTGCCAGCCTGGGCAGAGGAG...ACTGGGTGCAAACCCATCTGTATGTTGCTGCCACACAAGTCCCTTCCATTGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR CCA 90 bp CAGCAATGGAAGGGACTTGTGTGGCAGCAACATACAGATGGGTTTGCACCCAGTTGGAGGCCCCTGTGCTaGGAGAGGAGCCATGCCGTG +
Preference number: 4 (lower is better)
Translates to: QQWKGLVWQQHTDGFAPSWRPLC*ERSHAV
Trigger: CACGGCATGGCTCCTCTCCCAGCACAGGGGCCTCCA...ACTGGGTGCAAACCCATCTGTATGTTGCTGCCACACAAGTCCCTTCCATTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR CCA 90 bp CAGCAATGGAAGGGACTTGTGTGGCAGCAACATACAGATGGGTTTGCACCCAGTGCTCTGGGATGCAGCTaGCACACGACTGGAGGCCCC +
Preference number: 4 (lower is better)
Translates to: QQWKGLVWQQHTDGFAPSALGCS*HTTGGP
Trigger: GGGGCCTCCAGTCGTGTGCCAGCTGCATCCCAGAGC...ACTGGGTGCAAACCCATCTGTATGTTGCTGCCACACAAGTCCCTTCCATTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR CCA 90 bp GACAACCAGCAGCAGGTGTGTCAGCTCCTTGCTGGCTGTACCAGCAGGCCATTCGTTGCCAGTTCTGGATaGCCTGTCGTCTTAGGCCTG +
Preference number: 4 (lower is better)
Translates to: DNQQQVCQLLAGCTSRPFVASSG*PVVLGL
Trigger: CAGGCCTAAGACGACAGGCCATCCAGAACTGGCAAC...GAATGGCCTGCTGGTACAGCCAGCAAGGAGCTGACACACCTGCTGCTGGTTGTC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR CCA 90 bp CCCATTGGCTCTGTGACTGCTCAAGATAGAAATGAGCACAGCACCCAGAAGCAGCACGGCAGTAGCAGCTaGCCAGCCAGAGGGACCGGT +
Preference number: 4 (lower is better)
Translates to: PIGSVTAQDRNEHSTQKQHGSSS*PARGTG
Trigger: ACCGGTCCCTCTGGCTGGCCAGCTGCTACTGCCGTG...CTGCTTCTGGGTGCTGTGCTCATTTCTATCTTGAGCAGTCACAGAGCCAATGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR CCA 90 bp CAAGATAGAAATGAGCACAGCACCCAGAAGCAGGGATGGCCCCCTTTGGAGAAACACGGCAGTAGCAGCTaGCCAGCCAGAGGGACCGGT +
Preference number: 4 (lower is better)
Translates to: QDRNEHSTQKQGWPPLEKHGSSS*PARGTG
Trigger: ACCGGTCCCTCTGGCTGGCCAGCTGCTACTGCCGTG...TTTCTCCAAAGGGGGCCATCCCTGCTTCTGGGTGCTGTGCTCATTTCTATCTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR CCA 90 bp GGAGAGGAAAGTTGTGCTGTTGCCTGTGACTCCTTGGGGACAAGGCTGGGGAGGGTAATCTCTGACACGTaGTCCAGCTCCAGGACCTGC +
Preference number: 4 (lower is better)
Translates to: GEESCAVACDSLGTRLGRVISDT*SSSRTC
Trigger: GCAGGTCCTGGAGCTGGACCACGTGTCAGAGATTAC...CCTCCCCAGCCTTGTCCCCAAGGAGTCACAGGCAACAGCACAACTTTCCTCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR CCA 90 bp GCCTGTGTTCTGCATTCAAGATCAGGGCTGGTGACAGAGCAGCAGGCCTTGGGATCAGCCGCCACCTCCTaGGTAATCTCTGACACGTGG +
Preference number: 4 (lower is better)
Translates to: ACVLHSRSGLVTEQQALGSAATS*VISDTW
Trigger: CCACGTGTCAGAGATTACCCAGGAGGTGGCGGCTGA...TCCCAAGGCCTGCTGCTCTGTCACCAGCCCTGATCTTGAATGCAGAACACAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR TCA 90 bp ACAGGGAGCAGGAGCTACATGGATGCAGCTGGCAAAACAACTGACCTACTAAAGGGCCTGGGACCGCTCTaGACCACCGTTGGTAGCCTG +
Preference number: 4 (lower is better)
Translates to: TGSRSYMDAAGKTTDLLKGLGPL*TTVGSL
Trigger: CAGGCTACCAACGGTGGTTCAGAGCGGTCCCAGGCC...CTTTAGTAGGTCAGTTGTTTTGCCAGCTGCATCCATGTAGCTCCTGCTCCCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR TCA 90 bp CCAAGGCTGGATGAGAAAGCAGGGCCACCAAGGGCAGCGAGACTGCCAAGTCATGGGTATCCAGGTAGGTaGAGATACAGAAGAGGGCAG +
Preference number: 4 (lower is better)
Translates to: PRLDEKAGPPRAARLPSHGYPGR*RYRRGQ
Trigger: CTGCCCTCTTCTGTATCTTCACCTACCTGGATACCC...ATGACTTGGCAGTCTCGCTGCCCTTGGTGGCCCTGCTTTCTCATCCAGCCTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR TCA 90 bp CAAGATAGAAATGAGCACAGCACCCAGAAGCAGGGATGGCCCCCTTTGGAGAAAGCCTGGGTGCACCACTaGGCCAACATCGCCAGGAAC +
Preference number: 4 (lower is better)
Translates to: QDRNEHSTQKQGWPPLEKAWVHH*ANIARN
Trigger: GTTCCTGGCGATGTTGGCTCAGTGGTGCACCCAGGC...TTTCTCCAAAGGGGGCCATCCCTGCTTCTGGGTGCTGTGCTCATTTCTATCTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR GCA 90 bp TCCGCATGCCTGAAGACTAAGATGCCCAAGACTCAGCCAGGACACAGTGACCTGCCGCGCCGTCGCAGATaGTGTTGGTCTTGGAAAGGA +
Preference number: 4 (lower is better)
Translates to: SACLKTKMPKTQPGHSDLPRRRR*CWSWKG
Trigger: TCCTTTCCAAGACCAACAGCATCTGCGACGGCGCGG...CAGGTCACTGTGTCCTGGCTGAGTCTTGGGCATCTTAGTCTTCAGGCATGCGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR GCA 90 bp ATGAGAAAGCAGGGCCACCAAGGGCAGCGAGACTGCCAAGTCATCAAGCTGGTGAGGAACTGGTCGATCTaGACCACCTCCTGCTGCTTG +
Preference number: 4 (lower is better)
Translates to: MRKQGHQGQRDCQVIKLVRNWSI*TTSCCL
Trigger: CAAGCAGCAGGAGGTGGTGCAGATCGACCAGTTCCT...CACCAGCTTGATGACTTGGCAGTCTCGCTGCCCTTGGTGGCCCTGCTTTCTCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR GCA 90 bp GCCTGTGTTCTGCATTCAAGATCAGGGCTGGTGACAGAGCAGCAGGCCTTGGGATCCTCGATGAACTGTTaGAGCCGCAGCTTGGCACTG +
Preference number: 4 (lower is better)
Translates to: ACVLHSRSGLVTEQQALGSSMNC*SRSLAL
Trigger: CAGTGCCAAGCTGCGGCTGCAACAGTTCATCGAGGA...TCCCAAGGCCTGCTGCTCTGTCACCAGCCCTGATCTTGAATGCAGAACACAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR GCA 90 bp TACACACACTACACAGTAATATATACAGAGAGAGATGCTGGCCTGAGCCAAGGCCAGGCCCCGAGGCACTaGCCCCACCTCCTCTGCCCA +
Preference number: 4 (lower is better)
Translates to: YTHYTVIYTERDAGLSQGQAPRH*PHLLCP
Trigger: TGGGCAGAGGAGGTGGGGGCAGTGCCTCGGGGCCTG...GCCTTGGCTCAGGCCAGCATCTCTCTCTGTATATATTACTGTGTAGTGTGTGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR GCA 90 bp ACAGGGAGCAGGAGCTACATGGATGCAGCTGGCAAAACAACTGACCTACTAAAGGACTGGAGGCCCCTGTaGTGGGAGAGGAGCCATGCC +
Preference number: 4 (lower is better)
Translates to: TGSRSYMDAAGKTTDLLKDWRPL*WERSHA
Trigger: GGCATGGCTCCTCTCCCAGCACAGGGGCCTCCAGTC...CTTTAGTAGGTCAGTTGTTTTGCCAGCTGCATCCATGTAGCTCCTGCTCCCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR GCA 90 bp AAAGGTCTAGTCCAAGCCAGGGCCTCTCCAGAGGTCCAAAGAGCACTTGGTGTGACGAGTGAGCCTGGGTaGACCACTGAGCCAACATCG +
Preference number: 4 (lower is better)
Translates to: KGLVQARASPEVQRALGVTSEPG*TTEPTS
Trigger: CGATGTTGGCTCAGTGGTGCACCCAGGCTCACTCGT...CACACCAAGTGCTCTTTGGACCTCTGGAGAGGCCCTGGCTTGGACTAGACCTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR GCA 90 bp ATACAGATGGGTTTGCACCCAGTCCAGGGTGTGGCACAGCTGGAGAAAACTGGCAATGTCTCTGCAGCCTaGACCCAGGGCCCAGATCAC +
Preference number: 4 (lower is better)
Translates to: IQMGLHPVQGVAQLEKTGNVSAA*TQGPDH
Trigger: GTGATCTGGGCCCTGGGTGCAGGCTGCAGAGACATT...GCCAGTTTTCTCCAGCTGTGCCACACCCTGGACTGGGTGCAAACCCATCTGTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR CCA 90 bp ACAGAGCAAGCCACGCAACTCAGCGATGATGATAAACTGGGACAGGGCTATAGGTGTAGCCGACCCACCTaGCCCGCGATCTTCTGCTCC +
Preference number: 4 (lower is better)
Translates to: TEQATQLSDDDKLGQGYRCSRPT*PAIFCS
Trigger: GGAGCAGAAGATCGCGGGCCAGGTGGGTCGGCTACA...CCTATAGCCCTGTCCCAGTTTATCATCATCGCTGAGTTGCGTGGCTTGCTCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR CCA 90 bp GCCTGTGTTCTGCATTCAAGATCAGGGCTGGTGACAGAGCAGCAGGCCTTGGGAGTCTCCTTCAGGAACTaGTCGATCTGCACCACCTCC +
Preference number: 4 (lower is better)
Translates to: ACVLHSRSGLVTEQQALGVSFRN*SICTTS
Trigger: GGAGGTGGTGCAGATCGACCAGTTCCTGAAGGAGAC...TCCCAAGGCCTGCTGCTCTGTCACCAGCCCTGATCTTGAATGCAGAACACAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR CCA 90 bp CCACGTTCTGAGCAGAGGAATTCGGTTAGGTGTGCTCAGCCAGTGGGGCTTTGGGTCTCCTTCAGGAACTaGTCGATCTGCACCACCTCC +
Preference number: 4 (lower is better)
Translates to: PRSEQRNSVRCAQPVGLWVSFRN*SICTTS
Trigger: GGAGGTGGTGCAGATCGACCAGTTCCTGAAGGAGAC...CCAAAGCCCCACTGGCTGAGCACACCTAACCGAATTCCTCTGCTCAGAACGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR CCA 90 bp CTTCACCCAACCTTAAGCCTTGTCCTTGGGCAAGGACTACAGCTGAACTCACTTCTCCTCTGCCCAGGCTaGCACTGGGTGTGCTGCCAC +
Preference number: 4 (lower is better)
Translates to: LHPTLSLVLGQGLQLNSLLLCPG*HWVCCH
Trigger: GTGGCAGCACACCCAGTGCCAGCCTGGGCAGAGGAG...AAGTGAGTTCAGCTGTAGTCCTTGCCCAAGGACAAGGCTTAAGGTTGGGTGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR CCA 90 bp CAGCAATGGAAGGGACTTGTGTGGCAGCAACATACAGATGGGTTTGCACCCAGTGAACTACGAGGGGCCTaGGACCGCTCTGAACCACCG +
Preference number: 4 (lower is better)
Translates to: QQWKGLVWQQHTDGFAPSELRGA*DRSEPP
Trigger: CGGTGGTTCAGAGCGGTCCCAGGCCCCTCGTAGTTC...ACTGGGTGCAAACCCATCTGTATGTTGCTGCCACACAAGTCCCTTCCATTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR CCA 90 bp CCCATTGGCTCTGTGACTGCTCAAGATAGAAATGAGCACAGCACCCAGAAGCAGGAACTACGAGGGGCCTaGGACCGCTCTGAACCACCG +
Preference number: 4 (lower is better)
Translates to: PIGSVTAQDRNEHSTQKQELRGA*DRSEPP
Trigger: CGGTGGTTCAGAGCGGTCCCAGGCCCCTCGTAGTTC...CTGCTTCTGGGTGCTGTGCTCATTTCTATCTTGAGCAGTCACAGAGCCAATGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR CCA 90 bp TCCGCATGCCTGAAGACTAAGATGCCCAAGACTCAGCCAGGACACAGTGACCTGCGGCGTTGCCAGTTCTaGATGGCCTGTCGTCTTAGG +
Preference number: 4 (lower is better)
Translates to: SACLKTKMPKTQPGHSDLRRCQF*MACRLR
Trigger: CCTAAGACGACAGGCCATCCAGAACTGGCAACGCCG...CAGGTCACTGTGTCCTGGCTGAGTCTTGGGCATCTTAGTCTTCAGGCATGCGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR CCA 90 bp ACAGGGAGCAGGAGCTACATGGATGCAGCTGGCAAAACAACTGACCTACTAAAGCACGGCAGTAGCAGCTaGCCAGCCAGAGGGACCGGT +
Preference number: 4 (lower is better)
Translates to: TGSRSYMDAAGKTTDLLKHGSSS*PARGTG
Trigger: ACCGGTCCCTCTGGCTGGCCAGCTGCTACTGCCGTG...CTTTAGTAGGTCAGTTGTTTTGCCAGCTGCATCCATGTAGCTCCTGCTCCCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR CCA 90 bp GCCTGTGTTCTGCATTCAAGATCAGGGCTGGTGACAGAGCAGCAGGCCTTGGGAGTAATCTCTGACACGTaGTCCAGCTCCAGGACCTGC +
Preference number: 4 (lower is better)
Translates to: ACVLHSRSGLVTEQQALGVISDT*SSSRTC
Trigger: GCAGGTCCTGGAGCTGGACCACGTGTCAGAGATTAC...TCCCAAGGCCTGCTGCTCTGTCACCAGCCCTGATCTTGAATGCAGAACACAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR CAA 72 bp CCTTCTGGGTCACAGAAGGAGAGGAAAGTTGTGCTGTaGCCTGTGACTCCTTGGGGACAAGGCTGGGGAGGT +
Preference number: 4 (lower is better)
Translates to: PSGSQKERKVVL*PVTPWGQGWGG
Trigger: ACCTCCCCAGCCTTGTCCCCAAGGAGTCACAGGCAACAGCACAACTTTCCTCTCCTTCTGTGACCCAGAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR TCA 90 bp CCCATTGGCTCTGTGACTGCTCAAGATAGAAATGAGCACAGCACCCAGAAGCAGGACCTCATTGGAGCGTaGGGGGCTACCTCTCTCCAC +
Preference number: 4 (lower is better)
Translates to: PIGSVTAQDRNEHSTQKQDLIGA*GATSLH
Trigger: GTGGAGAGAGGTAGCCCCTCACGCTCCAATGAGGTC...CTGCTTCTGGGTGCTGTGCTCATTTCTATCTTGAGCAGTCACAGAGCCAATGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR TCA 90 bp CAAGATAGAAATGAGCACAGCACCCAGAAGCAGGGATGGCCCCCTTTGGAGAAAGACCTCATTGGAGCGTaGGGGGCTACCTCTCTCCAC +
Preference number: 4 (lower is better)
Translates to: QDRNEHSTQKQGWPPLEKDLIGA*GATSLH
Trigger: GTGGAGAGAGGTAGCCCCTCACGCTCCAATGAGGTC...TTTCTCCAAAGGGGGCCATCCCTGCTTCTGGGTGCTGTGCTCATTTCTATCTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR TCA 90 bp TACACACACTACACAGTAATATATACAGAGAGAGATGCTGGCCTGAGCCAAGGCGCAGGCAACGGTTGCTaGACCGGGTGGGCTGCTGGC +
Preference number: 4 (lower is better)
Translates to: YTHYTVIYTERDAGLSQGAGNGC*TGWAAG
Trigger: GCCAGCAGCCCACCCGGTTCAGCAACCGTTGCCTGC...GCCTTGGCTCAGGCCAGCATCTCTCTCTGTATATATTACTGTGTAGTGTGTGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR GCA 90 bp GAGCAAGCCACGCAACTCAGCGATGATGATAAACTGGGACAGGGCTATAGGATCCGGTCGCCTGTTCCTTaGCCTGGAAGGACGTGCTCT +
Preference number: 4 (lower is better)
Translates to: EQATQLSDDDKLGQGYRIRSPVP*PGRTCS
Trigger: AGAGCACGTCCTTCCAGGGCAAGGAACAGGCGACCG...GATCCTATAGCCCTGTCCCAGTTTATCATCATCGCTGAGTTGCGTGGCTTGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR GCA 90 bp CAGCAATGGAAGGGACTTGTGTGGCAGCAACATACAGATGGGTTTGCACCCAGTGCGGATCTTAAGGCGTaGCAGGCCCTCTTCGTAGGC +
Preference number: 4 (lower is better)
Translates to: QQWKGLVWQQHTDGFAPSADLKA*QALFVG
Trigger: GCCTACGAAGAGGGCCTGGCACGCCTTAAGATCCGC...ACTGGGTGCAAACCCATCTGTATGTTGCTGCCACACAAGTCCCTTCCATTGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR GCA 90 bp ACAGAGCAAGCCACGCAACTCAGCGATGATGATAAACTGGGACAGGGCTATAGGCCACCTCCTGCTGCTTaGGGCTCAGCTCCTGTTCCT +
Preference number: 4 (lower is better)
Translates to: TEQATQLSDDDKLGQGYRPPPAA*GSAPVP
Trigger: AGGAACAGGAGCTGAGCCGCAAGCAGCAGGAGGTGG...CCTATAGCCCTGTCCCAGTTTATCATCATCGCTGAGTTGCGTGGCTTGCTCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR GCA 90 bp CCCATTGGCTCTGTGACTGCTCAAGATAGAAATGAGCACAGCACCCAGAAGCAGTGCACCACCTCCTGCTaGTTGCGGCTCAGCTCCTGT +
Preference number: 4 (lower is better)
Translates to: PIGSVTAQDRNEHSTQKQCTTSC*LRLSSC
Trigger: ACAGGAGCTGAGCCGCAAGCAGCAGGAGGTGGTGCA...CTGCTTCTGGGTGCTGTGCTCATTTCTATCTTGAGCAGTCACAGAGCCAATGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR GCA 90 bp ATACAGATGGGTTTGCACCCAGTCCAGGGTGTGGCACAGCTGGAGAAAACTGGCTCCTCGATGAACTGTTaGAGCCGCAGCTTGGCACTG +
Preference number: 4 (lower is better)
Translates to: IQMGLHPVQGVAQLEKTGSSMNC*SRSLAL
Trigger: CAGTGCCAAGCTGCGGCTGCAACAGTTCATCGAGGA...GCCAGTTTTCTCCAGCTGTGCCACACCCTGGACTGGGTGCAAACCCATCTGTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR GCA 90 bp TCCGCATGCCTGAAGACTAAGATGCCCAAGACTCAGCCAGGACACAGTGACCTGGGGCATACTCCTCCTTaGTTTCCTTCTTCCCCCGCT +
Preference number: 4 (lower is better)
Translates to: SACLKTKMPKTQPGHSDLGHTPP*FPSSPA
Trigger: AGCGGGGGAAGAAGGAAAGCAAGGAGGAGTATGCCC...CAGGTCACTGTGTCCTGGCTGAGTCTTGGGCATCTTAGTCTTCAGGCATGCGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR GCA 90 bp ATACAGATGGGTTTGCACCCAGTCCAGGGTGTGGCACAGCTGGAGAAAACTGGCGGGCATACTCCTCCTTaGTTTCCTTCTTCCCCCGCT +
Preference number: 4 (lower is better)
Translates to: IQMGLHPVQGVAQLEKTGGHTPP*FPSSPA
Trigger: AGCGGGGGAAGAAGGAAAGCAAGGAGGAGTATGCCC...GCCAGTTTTCTCCAGCTGTGCCACACCCTGGACTGGGTGCAAACCCATCTGTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR GCA 90 bp GCCTGTGTTCTGCATTCAAGATCAGGGCTGGTGACAGAGCAGCAGGCCTTGGGATCCAGCTCCAGGACCTaGAGCCGCATACAGTTTCTT +
Preference number: 4 (lower is better)
Translates to: ACVLHSRSGLVTEQQALGSSSRT*SRIQFL
Trigger: AAGAAACTGTATGCGGCTGCAGGTCCTGGAGCTGGA...TCCCAAGGCCTGCTGCTCTGTCACCAGCCCTGATCTTGAATGCAGAACACAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR GCA 90 bp ATGAGAAAGCAGGGCCACCAAGGGCAGCGAGACTGCCAAGTCATCAAGCTGGTGTCCAGCTCCAGGACCTaGAGCCGCATACAGTTTCTT +
Preference number: 4 (lower is better)
Translates to: MRKQGHQGQRDCQVIKLVSSSRT*SRIQFL
Trigger: AAGAAACTGTATGCGGCTGCAGGTCCTGGAGCTGGA...CACCAGCTTGATGACTTGGCAGTCTCGCTGCCCTTGGTGGCCCTGCTTTCTCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR CCA 90 bp CTTCACCCAACCTTAAGCCTTGTCCTTGGGCAAGGACTACAGCTGAACTCACTTTGTAGCCGACCCACCTaGCCCGCGATCTTCTGCTCC +
Preference number: 4 (lower is better)
Translates to: LHPTLSLVLGQGLQLNSLCSRPT*PAIFCS
Trigger: GGAGCAGAAGATCGCGGGCCAGGTGGGTCGGCTACA...AAGTGAGTTCAGCTGTAGTCCTTGCCCAAGGACAAGGCTTAAGGTTGGGTGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR CCA 90 bp ACAGAGCAAGCCACGCAACTCAGCGATGATGATAAACTGGGACAGGGCTATAGGACGCTCACGTCCACTTaGCGTGAGAGCTCAGAGGCG +
Preference number: 4 (lower is better)
Translates to: TEQATQLSDDDKLGQGYRTLTST*RESSEA
Trigger: CGCCTCTGAGCTCTCACGCCAAGTGGACGTGAGCGT...CCTATAGCCCTGTCCCAGTTTATCATCATCGCTGAGTTGCGTGGCTTGCTCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR CCA 90 bp CTGGGAAGTTTTCCTTCAACATCGTGCCTTACAGAGACTGGGGTTGACAGCTTAGCTCTGGGATGCAGCTaGCACACGACTGGAGGCCCC +
Preference number: 4 (lower is better)
Translates to: LGSFPSTSCLTETGVDSLALGCS*HTTGGP
Trigger: GGGGCCTCCAGTCGTGTGCCAGCTGCATCCCAGAGC...TAAGCTGTCAACCCCAGTCTCTGTAAGGCACGATGTTGAAGGAAAACTTCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR CCA 90 bp ATACAGATGGGTTTGCACCCAGTCCAGGGTGTGGCACAGCTGGAGAAAACTGGCGTTGCCAGTTCTGGATaGCCTGTCGTCTTAGGCCTG +
Preference number: 4 (lower is better)
Translates to: IQMGLHPVQGVAQLEKTGVASSG*PVVLGL
Trigger: CAGGCCTAAGACGACAGGCCATCCAGAACTGGCAAC...GCCAGTTTTCTCCAGCTGTGCCACACCCTGGACTGGGTGCAAACCCATCTGTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR CCA 90 bp CCCTGTCCGTGGGTCAGAATGCCTGGAACCAGCATCTTGGTCCTGCCTCCTGCCCATCTTGAGGATTTCTaGGCTGATGACCTCATTGGA +
Preference number: 4 (lower is better)
Translates to: PCPWVRMPGTSILVLPPAHLEDF*ADDLIG
Trigger: TCCAATGAGGTCATCAGCCCAGAAATCCTCAAGATG...GGCAGGAGGCAGGACCAAGATGCTGGTTCCAGGCATTCTGACCCACGGACAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR CCA 90 bp AAAGGTCTAGTCCAAGCCAGGGCCTCTCCAGAGGTCCAAAGAGCACTTGGTGTGAGGATGTTGGGGCAGTaGGAGATTCGCAGGATCAGC +
Preference number: 4 (lower is better)
Translates to: KGLVQARASPEVQRALGVRMLGQ*EIRRIS
Trigger: GCTGATCCTGCGAATCTCCCACTGCCCCAACATCCT...CACACCAAGTGCTCTTTGGACCTCTGGAGAGGCCCTGGCTTGGACTAGACCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR CCA 90 bp CAGCAATGGAAGGGACTTGTGTGGCAGCAACATACAGATGGGTTTGCACCCAGTTCCTCAAACAGCTTCTaGGCCTCGGGACTGCTGGGC +
Preference number: 4 (lower is better)
Translates to: QQWKGLVWQQHTDGFAPSSSNSF*ASGLLG
Trigger: GCCCAGCAGTCCCGAGGCCCAGAAGCTGTTTGAGGA...ACTGGGTGCAAACCCATCTGTATGTTGCTGCCACACAAGTCCCTTCCATTGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR CAA 72 bp GGAAGGGACTTGTGTGGCAGCAACATACAGATGGGTTaGCACCCAGTCCAGGGTGTGGCACAGCTGGAGAAA +
Preference number: 4 (lower is better)
Translates to: GRDLCGSNIQMG*HPVQGVAQLEK
Trigger: TTTCTCCAGCTGTGCCACACCCTGGACTGGGTGCAAACCCATCTGTATGTTGCTGCCACACAAGTCCCTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR TCA 90 bp ACAGAGCAAGCCACGCAACTCAGCGATGATGATAAACTGGGACAGGGCTATAGGCAGGTCCTGCTTGAGTaGAGCCAGCAGTTCCACGCT +
Preference number: 4 (lower is better)
Translates to: TEQATQLSDDDKLGQGYRQVLLE*SQQFHA
Trigger: AGCGTGGAACTGCTGGCTTCACTCAAGCAGGACCTG...CCTATAGCCCTGTCCCAGTTTATCATCATCGCTGAGTTGCGTGGCTTGCTCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR TCA 90 bp CTTCACCCAACCTTAAGCCTTGTCCTTGGGCAAGGACTACAGCTGAACTCACTTGGGTCCTTCAGCCTCTaGCTCAGTAGTTCGGGAGCC +
Preference number: 4 (lower is better)
Translates to: LHPTLSLVLGQGLQLNSLGSFSL*LSSSGA
Trigger: GGCTCCCGAACTACTGAGTCAGAGGCTGAAGGACCC...AAGTGAGTTCAGCTGTAGTCCTTGCCCAAGGACAAGGCTTAAGGTTGGGTGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR TCA 90 bp TCCGCATGCCTGAAGACTAAGATGCCCAAGACTCAGCCAGGACACAGTGACCTGGGGTATCCAGGTAGGTaGAGATACAGAAGAGGGCAG +
Preference number: 4 (lower is better)
Translates to: SACLKTKMPKTQPGHSDLGYPGR*RYRRGQ
Trigger: CTGCCCTCTTCTGTATCTTCACCTACCTGGATACCC...CAGGTCACTGTGTCCTGGCTGAGTCTTGGGCATCTTAGTCTTCAGGCATGCGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR TCA 90 bp CAAGATAGAAATGAGCACAGCACCCAGAAGCAGGGATGGCCCCCTTTGGAGAAACTCCTGGGTAATCTCTaGCACGTGGTCCAGCTCCAG +
Preference number: 4 (lower is better)
Translates to: QDRNEHSTQKQGWPPLEKLLGNL*HVVQLQ
Trigger: CTGGAGCTGGACCACGTGTCAGAGATTACCCAGGAG...TTTCTCCAAAGGGGGCCATCCCTGCTTCTGGGTGCTGTGCTCATTTCTATCTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR GCA 90 bp CTGGGAAGTTTTCCTTCAACATCGTGCCTTACAGAGACTGGGGTTGACAGCTTATGGCTGTACTCCAGGTaGGCGCGCAGCGACGATAGG +
Preference number: 4 (lower is better)
Translates to: LGSFPSTSCLTETGVDSLWLYSR*ARSDDR
Trigger: CCTATCGTCGCTGCGCGCGCACCTGGAGTACAGCCA...TAAGCTGTCAACCCCAGTCTCTGTAAGGCACGATGTTGAAGGAAAACTTCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR GCA 90 bp CAAGATAGAAATGAGCACAGCACCCAGAAGCAGGGATGGCCCCCTTTGGAGAAATGCCCTGGAAGGACGTaGTCTCAAAGACCTCACGCC +
Preference number: 4 (lower is better)
Translates to: QDRNEHSTQKQGWPPLEKCPGRT*SQRPHA
Trigger: GGCGTGAGGTCTTTGAGAGCACGTCCTTCCAGGGCA...TTTCTCCAAAGGGGGCCATCCCTGCTTCTGGGTGCTGTGCTCATTTCTATCTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR GCA 90 bp GCCTGTGTTCTGCATTCAAGATCAGGGCTGGTGACAGAGCAGCAGGCCTTGGGATTATGCACCAGGTCCTaGTTGAGTGAAGCCAGCAGT +
Preference number: 4 (lower is better)
Translates to: ACVLHSRSGLVTEQQALGLCTRS*LSEASS
Trigger: ACTGCTGGCTTCACTCAAGCAGGACCTGGTGCATAA...TCCCAAGGCCTGCTGCTCTGTCACCAGCCCTGATCTTGAATGCAGAACACAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR GCA 90 bp CCACGTTCTGAGCAGAGGAATTCGGTTAGGTGTGCTCAGCCAGTGGGGCTTTGGTTATGCACCAGGTCCTaGTTGAGTGAAGCCAGCAGT +
Preference number: 4 (lower is better)
Translates to: PRSEQRNSVRCAQPVGLWLCTRS*LSEASS
Trigger: ACTGCTGGCTTCACTCAAGCAGGACCTGGTGCATAA...CCAAAGCCCCACTGGCTGAGCACACCTAACCGAATTCCTCTGCTCAGAACGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR GCA 90 bp CTTCACCCAACCTTAAGCCTTGTCCTTGGGCAAGGACTACAGCTGAACTCACTTTGCACCACCTCCTGCTaGTTGCGGCTCAGCTCCTGT +
Preference number: 4 (lower is better)
Translates to: LHPTLSLVLGQGLQLNSLCTTSC*LRLSSC
Trigger: ACAGGAGCTGAGCCGCAAGCAGCAGGAGGTGGTGCA...AAGTGAGTTCAGCTGTAGTCCTTGCCCAAGGACAAGGCTTAAGGTTGGGTGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR GCA 90 bp GAGCAAGCCACGCAACTCAGCGATGATGATAAACTGGGACAGGGCTATAGGATCCTGGGAGAGGAGCCATaGCGTGATACGGCGTATGTG +
Preference number: 4 (lower is better)
Translates to: EQATQLSDDDKLGQGYRILGEEP*RDTAYV
Trigger: CACATACGCCGTATCACGGCATGGCTCCTCTCCCAG...GATCCTATAGCCCTGTCCCAGTTTATCATCATCGCTGAGTTGCGTGGCTTGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR GCA 90 bp CTTCACCCAACCTTAAGCCTTGTCCTTGGGCAAGGACTACAGCTGAACTCACTTCAGGTTCCCACCAGCTaGCTTCAGCAGGGACTCCAG +
Preference number: 4 (lower is better)
Translates to: LHPTLSLVLGQGLQLNSLQVPTS*LQQGLQ
Trigger: CTGGAGTCCCTGCTGAAGGCAGCTGGTGGGAACCTG...AAGTGAGTTCAGCTGTAGTCCTTGCCCAAGGACAAGGCTTAAGGTTGGGTGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR GCA 90 bp CAAGATAGAAATGAGCACAGCACCCAGAAGCAGGGATGGCCCCCTTTGGAGAAAAATGTCTCTGCAGCCTaGACCCAGGGCCCAGATCAC +
Preference number: 4 (lower is better)
Translates to: QDRNEHSTQKQGWPPLEKNVSAA*TQGPDH
Trigger: GTGATCTGGGCCCTGGGTGCAGGCTGCAGAGACATT...TTTCTCCAAAGGGGGCCATCCCTGCTTCTGGGTGCTGTGCTCATTTCTATCTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR CCA 90 bp CAGCAATGGAAGGGACTTGTGTGGCAGCAACATACAGATGGGTTTGCACCCAGTTCAGCCGCCACCTCCTaGGTAATCTCTGACACGTGG +
Preference number: 4 (lower is better)
Translates to: QQWKGLVWQQHTDGFAPSSAATS*VISDTW
Trigger: CCACGTGTCAGAGATTACCCAGGAGGTGGCGGCTGA...ACTGGGTGCAAACCCATCTGTATGTTGCTGCCACACAAGTCCCTTCCATTGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR TCA 90 bp CAAGATAGAAATGAGCACAGCACCCAGAAGCAGGGATGGCCCCCTTTGGAGAAATGTGCTTGGCACAGCTaGGCCTGCATGATGTTCTCG +
Preference number: 4 (lower is better)
Translates to: QDRNEHSTQKQGWPPLEKCAWHS*ACMMFS
Trigger: CGAGAACATCATGCAGGCTCAGCTGTGCCAAGCACA...TTTCTCCAAAGGGGGCCATCCCTGCTTCTGGGTGCTGTGCTCATTTCTATCTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR TCA 90 bp CTTCACCCAACCTTAAGCCTTGTCCTTGGGCAAGGACTACAGCTGAACTCACTTACTGTCATAGCAGCCTaGGCTCTGGGATGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: LHPTLSLVLGQGLQLNSLTVIAA*ALGCSW
Trigger: CCAGCTGCATCCCAGAGCTCAGGCTGCTATGACAGT...AAGTGAGTTCAGCTGTAGTCCTTGCCCAAGGACAAGGCTTAAGGTTGGGTGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR TCA 90 bp CTTCACCCAACCTTAAGCCTTGTCCTTGGGCAAGGACTACAGCTGAACTCACTTCTCCTGGGTAATCTCTaGCACGTGGTCCAGCTCCAG +
Preference number: 4 (lower is better)
Translates to: LHPTLSLVLGQGLQLNSLLLGNL*HVVQLQ
Trigger: CTGGAGCTGGACCACGTGTCAGAGATTACCCAGGAG...AAGTGAGTTCAGCTGTAGTCCTTGCCCAAGGACAAGGCTTAAGGTTGGGTGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR GCA 90 bp ACAGGGAGCAGGAGCTACATGGATGCAGCTGGCAAAACAACTGACCTACTAAAGTGCCCTGGAAGGACGTaGTCTCAAAGACCTCACGCC +
Preference number: 4 (lower is better)
Translates to: TGSRSYMDAAGKTTDLLKCPGRT*SQRPHA
Trigger: GGCGTGAGGTCTTTGAGAGCACGTCCTTCCAGGGCA...CTTTAGTAGGTCAGTTGTTTTGCCAGCTGCATCCATGTAGCTCCTGCTCCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR GCA 90 bp CTGGGAAGTTTTCCTTCAACATCGTGCCTTACAGAGACTGGGGTTGACAGCTTAAGGATGCCACGGACTTaGGCGCAAACAGCTCGCCGA +
Preference number: 4 (lower is better)
Translates to: LGSFPSTSCLTETGVDSLRMPRT*AQTARR
Trigger: TCGGCGAGCTGTTTGCGCGCAAGTCCGTGGCATCCT...TAAGCTGTCAACCCCAGTCTCTGTAAGGCACGATGTTGAAGGAAAACTTCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR GCA 90 bp AAAGGTCTAGTCCAAGCCAGGGCCTCTCCAGAGGTCCAAAGAGCACTTGGTGTGAGCTCCTGTTCCTTATaGACCAGGTCCTGCTTGAGT +
Preference number: 4 (lower is better)
Translates to: KGLVQARASPEVQRALGVSSCSL*TRSCLS
Trigger: ACTCAAGCAGGACCTGGTGCATAAGGAACAGGAGCT...CACACCAAGTGCTCTTTGGACCTCTGGAGAGGCCCTGGCTTGGACTAGACCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR GCA 90 bp CTGGGAAGTTTTCCTTCAACATCGTGCCTTACAGAGACTGGGGTTGACAGCTTAACTGGCCTCCCGAGCTaGCGTCTCCTTCAGGAACTG +
Preference number: 4 (lower is better)
Translates to: LGSFPSTSCLTETGVDSLTGLPS*RLLQEL
Trigger: CAGTTCCTGAAGGAGACGGCAGCTCGGGAGGCCAGT...TAAGCTGTCAACCCCAGTCTCTGTAAGGCACGATGTTGAAGGAAAACTTCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR GCA 90 bp CAGCAATGGAAGGGACTTGTGTGGCAGCAACATACAGATGGGTTTGCACCCAGTTCCTCGATGAACTGTTaGAGCCGCAGCTTGGCACTG +
Preference number: 4 (lower is better)
Translates to: QQWKGLVWQQHTDGFAPSSSMNC*SRSLAL
Trigger: CAGTGCCAAGCTGCGGCTGCAACAGTTCATCGAGGA...ACTGGGTGCAAACCCATCTGTATGTTGCTGCCACACAAGTCCCTTCCATTGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR GCA 90 bp ACAGGGAGCAGGAGCTACATGGATGCAGCTGGCAAAACAACTGACCTACTAAAGCTGGGAGAGGAGCCATaGCGTGATACGGCGTATGTG +
Preference number: 4 (lower is better)
Translates to: TGSRSYMDAAGKTTDLLKLGEEP*RDTAYV
Trigger: CACATACGCCGTATCACGGCATGGCTCCTCTCCCAG...CTTTAGTAGGTCAGTTGTTTTGCCAGCTGCATCCATGTAGCTCCTGCTCCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR GCA 90 bp CTGGGAAGTTTTCCTTCAACATCGTGCCTTACAGAGACTGGGGTTGACAGCTTACGACGAGGTCGGCGTTaGCAGTTCTGGATGGCCTGT +
Preference number: 4 (lower is better)
Translates to: LGSFPSTSCLTETGVDSLRRGRR*QFWMAC
Trigger: ACAGGCCATCCAGAACTGGCAACGCCGACCTCGTCG...TAAGCTGTCAACCCCAGTCTCTGTAAGGCACGATGTTGAAGGAAAACTTCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR GCA 90 bp CTTCACCCAACCTTAAGCCTTGTCCTTGGGCAAGGACTACAGCTGAACTCACTTACGAGTGAGCCTGGGTaGACCACTGAGCCAACATCG +
Preference number: 4 (lower is better)
Translates to: LHPTLSLVLGQGLQLNSLTSEPG*TTEPTS
Trigger: CGATGTTGGCTCAGTGGTGCACCCAGGCTCACTCGT...AAGTGAGTTCAGCTGTAGTCCTTGCCCAAGGACAAGGCTTAAGGTTGGGTGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR GCA 90 bp CTGGGAAGTTTTCCTTCAACATCGTGCCTTACAGAGACTGGGGTTGACAGCTTACAGGTTCCCACCAGCTaGCTTCAGCAGGGACTCCAG +
Preference number: 4 (lower is better)
Translates to: LGSFPSTSCLTETGVDSLQVPTS*LQQGLQ
Trigger: CTGGAGTCCCTGCTGAAGGCAGCTGGTGGGAACCTG...TAAGCTGTCAACCCCAGTCTCTGTAAGGCACGATGTTGAAGGAAAACTTCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR CCA 90 bp ATGAGAAAGCAGGGCCACCAAGGGCAGCGAGACTGCCAAGTCATCAAGCTGGTGCGTCGCAGATGCTGTTaGTCTTGGAAAGGATGTAGA +
Preference number: 4 (lower is better)
Translates to: MRKQGHQGQRDCQVIKLVRRRCC*SWKGCR
Trigger: TCTACATCCTTTCCAAGACCAACAGCATCTGCGACG...CACCAGCTTGATGACTTGGCAGTCTCGCTGCCCTTGGTGGCCCTGCTTTCTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR CCA 90 bp CAAGATAGAAATGAGCACAGCACCCAGAAGCAGGGATGGCCCCCTTTGGAGAAAGCCTGTTCCTTGCCCTaGAAGGACGTGCTCTCAAAG +
Preference number: 4 (lower is better)
Translates to: QDRNEHSTQKQGWPPLEKACSLP*KDVLSK
Trigger: CTTTGAGAGCACGTCCTTCCAGGGCAAGGAACAGGC...TTTCTCCAAAGGGGGCCATCCCTGCTTCTGGGTGCTGTGCTCATTTCTATCTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR CCA 90 bp CAGCAATGGAAGGGACTTGTGTGGCAGCAACATACAGATGGGTTTGCACCCAGTGTTGCCAGTTCTGGATaGCCTGTCGTCTTAGGCCTG +
Preference number: 4 (lower is better)
Translates to: QQWKGLVWQQHTDGFAPSVASSG*PVVLGL
Trigger: CAGGCCTAAGACGACAGGCCATCCAGAACTGGCAAC...ACTGGGTGCAAACCCATCTGTATGTTGCTGCCACACAAGTCCCTTCCATTGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR CCA 90 bp GGAGAGGAAAGTTGTGCTGTTGCCTGTGACTCCTTGGGGACAAGGCTGGGGAGGCATCTTGAGGATTTCTaGGCTGATGACCTCATTGGA +
Preference number: 4 (lower is better)
Translates to: GEESCAVACDSLGTRLGRHLEDF*ADDLIG
Trigger: TCCAATGAGGTCATCAGCCCAGAAATCCTCAAGATG...CCTCCCCAGCCTTGTCCCCAAGGAGTCACAGGCAACAGCACAACTTTCCTCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR CCA 90 bp CAGCAATGGAAGGGACTTGTGTGGCAGCAACATACAGATGGGTTTGCACCCAGTGTAATCTCTGACACGTaGTCCAGCTCCAGGACCTGC +
Preference number: 4 (lower is better)
Translates to: QQWKGLVWQQHTDGFAPSVISDT*SSSRTC
Trigger: GCAGGTCCTGGAGCTGGACCACGTGTCAGAGATTAC...ACTGGGTGCAAACCCATCTGTATGTTGCTGCCACACAAGTCCCTTCCATTGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR TCA 90 bp CTGGGAAGTTTTCCTTCAACATCGTGCCTTACAGAGACTGGGGTTGACAGCTTAACTGTCATAGCAGCCTaGGCTCTGGGATGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: LGSFPSTSCLTETGVDSLTVIAA*ALGCSW
Trigger: CCAGCTGCATCCCAGAGCTCAGGCTGCTATGACAGT...TAAGCTGTCAACCCCAGTCTCTGTAAGGCACGATGTTGAAGGAAAACTTCCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR TCA 90 bp TACACACACTACACAGTAATATATACAGAGAGAGATGCTGGCCTGAGCCAAGGCGGGTCCTTCAGCCTCTaGCTCAGTAGTTCGGGAGCC +
Preference number: 4 (lower is better)
Translates to: YTHYTVIYTERDAGLSQGGSFSL*LSSSGA
Trigger: GGCTCCCGAACTACTGAGTCAGAGGCTGAAGGACCC...GCCTTGGCTCAGGCCAGCATCTCTCTCTGTATATATTACTGTGTAGTGTGTGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR TCA 90 bp CAGCAATGGAAGGGACTTGTGTGGCAGCAACATACAGATGGGTTTGCACCCAGTGGGTATCCAGGTAGGTaGAGATACAGAAGAGGGCAG +
Preference number: 4 (lower is better)
Translates to: QQWKGLVWQQHTDGFAPSGYPGR*RYRRGQ
Trigger: CTGCCCTCTTCTGTATCTTCACCTACCTGGATACCC...ACTGGGTGCAAACCCATCTGTATGTTGCTGCCACACAAGTCCCTTCCATTGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR TCA 90 bp GCCTGTGTTCTGCATTCAAGATCAGGGCTGGTGACAGAGCAGCAGGCCTTGGGAAACCACCTTCTACCTTaGTGTGCAGAATCTTCGAGA +
Preference number: 4 (lower is better)
Translates to: ACVLHSRSGLVTEQQALGNHLLP*CAESSR
Trigger: TCTCGAAGATTCTGCACATCAAGGTAGAAGGTGGTT...TCCCAAGGCCTGCTGCTCTGTCACCAGCCCTGATCTTGAATGCAGAACACAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR GCA 90 bp ACAGAGCAAGCCACGCAACTCAGCGATGATGATAAACTGGGACAGGGCTATAGGTCCAGCTCCAGGACCTaGAGCCGCATACAGTTTCTT +
Preference number: 4 (lower is better)
Translates to: TEQATQLSDDDKLGQGYRSSSRT*SRIQFL
Trigger: AAGAAACTGTATGCGGCTGCAGGTCCTGGAGCTGGA...CCTATAGCCCTGTCCCAGTTTATCATCATCGCTGAGTTGCGTGGCTTGCTCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR GCA 90 bp CCAAGGCTGGATGAGAAAGCAGGGCCACCAAGGGCAGCGAGACTGCCAAGTCATTCTGCAATCCCAATCTaGACCACAATGGATTTAAGG +
Preference number: 4 (lower is better)
Translates to: PRLDEKAGPPRAARLPSHSAIPI*TTMDLR
Trigger: CCTTAAATCCATTGTGGTGCAGATTGGGATTGCAGA...ATGACTTGGCAGTCTCGCTGCCCTTGGTGGCCCTGCTTTCTCATCCAGCCTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR CCA 90 bp CCACGTTCTGAGCAGAGGAATTCGGTTAGGTGTGCTCAGCCAGTGGGGCTTTGGAGATGCTGTTGGTCTTaGAAAGGATGTAGAGCGTCT +
Preference number: 4 (lower is better)
Translates to: PRSEQRNSVRCAQPVGLWRCCWS*KGCRAS
Trigger: AGACGCTCTACATCCTTTCCAAGACCAACAGCATCT...CCAAAGCCCCACTGGCTGAGCACACCTAACCGAATTCCTCTGCTCAGAACGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR CCA 90 bp TCCGCATGCCTGAAGACTAAGATGCCCAAGACTCAGCCAGGACACAGTGACCTGCGTCGCAGATGCTGTTaGTCTTGGAAAGGATGTAGA +
Preference number: 4 (lower is better)
Translates to: SACLKTKMPKTQPGHSDLRRRCC*SWKGCR
Trigger: TCTACATCCTTTCCAAGACCAACAGCATCTGCGACG...CAGGTCACTGTGTCCTGGCTGAGTCTTGGGCATCTTAGTCTTCAGGCATGCGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR CCA 90 bp ACAGGGAGCAGGAGCTACATGGATGCAGCTGGCAAAACAACTGACCTACTAAAGGTCTCCTTCAGGAACTaGTCGATCTGCACCACCTCC +
Preference number: 4 (lower is better)
Translates to: TGSRSYMDAAGKTTDLLKVSFRN*SICTTS
Trigger: GGAGGTGGTGCAGATCGACCAGTTCCTGAAGGAGAC...CTTTAGTAGGTCAGTTGTTTTGCCAGCTGCATCCATGTAGCTCCTGCTCCCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR GCA 90 bp TACACACACTACACAGTAATATATACAGAGAGAGATGCTGGCCTGAGCCAAGGCTGCCCTGGAAGGACGTaGTCTCAAAGACCTCACGCC +
Preference number: 4 (lower is better)
Translates to: YTHYTVIYTERDAGLSQGCPGRT*SQRPHA
Trigger: GGCGTGAGGTCTTTGAGAGCACGTCCTTCCAGGGCA...GCCTTGGCTCAGGCCAGCATCTCTCTCTGTATATATTACTGTGTAGTGTGTGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR GCA 90 bp ACAGAGCAAGCCACGCAACTCAGCGATGATGATAAACTGGGACAGGGCTATAGGAGCTCCTGTTCCTTATaGACCAGGTCCTGCTTGAGT +
Preference number: 4 (lower is better)
Translates to: TEQATQLSDDDKLGQGYRSSCSL*TRSCLS
Trigger: ACTCAAGCAGGACCTGGTGCATAAGGAACAGGAGCT...CCTATAGCCCTGTCCCAGTTTATCATCATCGCTGAGTTGCGTGGCTTGCTCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR GCA 90 bp CAAGATAGAAATGAGCACAGCACCCAGAAGCAGGGATGGCCCCCTTTGGAGAAAAGCTCCTGTTCCTTATaGACCAGGTCCTGCTTGAGT +
Preference number: 4 (lower is better)
Translates to: QDRNEHSTQKQGWPPLEKSSCSL*TRSCLS
Trigger: ACTCAAGCAGGACCTGGTGCATAAGGAACAGGAGCT...TTTCTCCAAAGGGGGCCATCCCTGCTTCTGGGTGCTGTGCTCATTTCTATCTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR GCA 90 bp CTGGGAAGTTTTCCTTCAACATCGTGCCTTACAGAGACTGGGGTTGACAGCTTAAGGAACTGGTCGATCTaGACCACCTCCTGCTGCTTG +
Preference number: 4 (lower is better)
Translates to: LGSFPSTSCLTETGVDSLRNWSI*TTSCCL
Trigger: CAAGCAGCAGGAGGTGGTGCAGATCGACCAGTTCCT...TAAGCTGTCAACCCCAGTCTCTGTAAGGCACGATGTTGAAGGAAAACTTCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR CCA 90 bp CATGCCCCAATTTACACGTGCTGTTTGGCAGGGGATGGGAGTGGAAGAGATGGCAGATGCTGTTGGTCTTaGAAAGGATGTAGAGCGTCT +
Preference number: 4 (lower is better)
Translates to: HAPIYTCCLAGDGSGRDGRCCWS*KGCRAS
Trigger: AGACGCTCTACATCCTTTCCAAGACCAACAGCATCT...GCCATCTCTTCCACTCCCATCCCCTGCCAAACAGCACGTGTAAATTGGGGCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR CCA 90 bp ATACAGATGGGTTTGCACCCAGTCCAGGGTGTGGCACAGCTGGAGAAAACTGGCCATCTTGAGGATTTCTaGGCTGATGACCTCATTGGA +
Preference number: 4 (lower is better)
Translates to: IQMGLHPVQGVAQLEKTGHLEDF*ADDLIG
Trigger: TCCAATGAGGTCATCAGCCCAGAAATCCTCAAGATG...GCCAGTTTTCTCCAGCTGTGCCACACCCTGGACTGGGTGCAAACCCATCTGTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR CCA 90 bp CTGGGAAGTTTTCCTTCAACATCGTGCCTTACAGAGACTGGGGTTGACAGCTTAAGGATGTTGGGGCAGTaGGAGATTCGCAGGATCAGC +
Preference number: 4 (lower is better)
Translates to: LGSFPSTSCLTETGVDSLRMLGQ*EIRRIS
Trigger: GCTGATCCTGCGAATCTCCCACTGCCCCAACATCCT...TAAGCTGTCAACCCCAGTCTCTGTAAGGCACGATGTTGAAGGAAAACTTCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR CAA 72 bp AATGAGCACAGCACCCAGAAGCAGGGATGGCCCCCTTaGGAGAAAGCAAAGAAACCACAACTTGGAGACAGA +
Preference number: 4 (lower is better)
Translates to: NEHSTQKQGWPP*EKAKKPQLGDR
Trigger: TCTGTCTCCAAGTTGTGGTTTCTTTGCTTTCTCCAAAGGGGGCCATCCCTGCTTCTGGGTGCTGTGCTCATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR TCA 90 bp CAGCAATGGAAGGGACTTGTGTGGCAGCAACATACAGATGGGTTTGCACCCAGTAACCACCTTCTACCTTaGTGTGCAGAATCTTCGAGA +
Preference number: 4 (lower is better)
Translates to: QQWKGLVWQQHTDGFAPSNHLLP*CAESSR
Trigger: TCTCGAAGATTCTGCACATCAAGGTAGAAGGTGGTT...ACTGGGTGCAAACCCATCTGTATGTTGCTGCCACACAAGTCCCTTCCATTGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR TCA 90 bp GAGCAAGCCACGCAACTCAGCGATGATGATAAACTGGGACAGGGCTATAGGATCAACCACCTTCTACCTTaGTGTGCAGAATCTTCGAGA +
Preference number: 4 (lower is better)
Translates to: EQATQLSDDDKLGQGYRINHLLP*CAESSR
Trigger: TCTCGAAGATTCTGCACATCAAGGTAGAAGGTGGTT...GATCCTATAGCCCTGTCCCAGTTTATCATCATCGCTGAGTTGCGTGGCTTGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR GCA 90 bp ACAGAGCAAGCCACGCAACTCAGCGATGATGATAAACTGGGACAGGGCTATAGGCCTTCTACCTTGATGTaGAGAATCTTCGAGAAGCCA +
Preference number: 4 (lower is better)
Translates to: TEQATQLSDDDKLGQGYRPSTLM*RIFEKP
Trigger: TGGCTTCTCGAAGATTCTGCACATCAAGGTAGAAGG...CCTATAGCCCTGTCCCAGTTTATCATCATCGCTGAGTTGCGTGGCTTGCTCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR GCA 90 bp CAGCAATGGAAGGGACTTGTGTGGCAGCAACATACAGATGGGTTTGCACCCAGTCCTTCTACCTTGATGTaGAGAATCTTCGAGAAGCCA +
Preference number: 4 (lower is better)
Translates to: QQWKGLVWQQHTDGFAPSPSTLM*RIFEKP
Trigger: TGGCTTCTCGAAGATTCTGCACATCAAGGTAGAAGG...ACTGGGTGCAAACCCATCTGTATGTTGCTGCCACACAAGTCCCTTCCATTGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR GCA 90 bp CCCATTGGCTCTGTGACTGCTCAAGATAGAAATGAGCACAGCACCCAGAAGCAGCCTTCTACCTTGATGTaGAGAATCTTCGAGAAGCCA +
Preference number: 4 (lower is better)
Translates to: PIGSVTAQDRNEHSTQKQPSTLM*RIFEKP
Trigger: TGGCTTCTCGAAGATTCTGCACATCAAGGTAGAAGG...CTGCTTCTGGGTGCTGTGCTCATTTCTATCTTGAGCAGTCACAGAGCCAATGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR CCA 90 bp CATCTTTTATTGGATACAGAACCAGAAATTCTGATGCCCGTGAATCCTTTTAAACCCAGGGCCCGGAGGTaGGGCCAACAGCGTCCAATC +
Preference number: 4 (lower is better)
Translates to: HLLLDTEPEILMPVNPFKPRARR*GQQRPI
Trigger: GATTGGACGCTGTTGGCCCCACCTCCGGGCCCTGGG...TTTAAAAGGATTCACGGGCATCAGAATTTCTGGTTCTGTATCCAATAAAAGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR GCA 90 bp ACAGAGCAAGCCACGCAACTCAGCGATGATGATAAACTGGGACAGGGCTATAGGCTCTTTGAAGTAATCTaGAATCCCAATCTGCACCAC +
Preference number: 4 (lower is better)
Translates to: TEQATQLSDDDKLGQGYRLFEVI*NPNLHH
Trigger: GTGGTGCAGATTGGGATTGCAGATTACTTCAAAGAG...CCTATAGCCCTGTCCCAGTTTATCATCATCGCTGAGTTGCGTGGCTTGCTCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR GCA 90 bp CATCTTTTATTGGATACAGAACCAGAAATTCTGATGCCCGTGAATCCTTTTAAACTGCTGCTGATGACCTaGAACTGGCGCTCGGCCCTG +
Preference number: 4 (lower is better)
Translates to: HLLLDTEPEILMPVNPFKLLLMT*NWRSAL
Trigger: CAGGGCCGAGCGCCAGTTGCAGGTCATCAGCAGCAG...TTTAAAAGGATTCACGGGCATCAGAATTTCTGGTTCTGTATCCAATAAAAGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR GCA 90 bp ACAGGGAGCAGGAGCTACATGGATGCAGCTGGCAAAACAACTGACCTACTAAAGTCTGCAATCCCAATCTaGACCACAATGGATTTAAGG +
Preference number: 4 (lower is better)
Translates to: TGSRSYMDAAGKTTDLLKSAIPI*TTMDLR
Trigger: CCTTAAATCCATTGTGGTGCAGATTGGGATTGCAGA...CTTTAGTAGGTCAGTTGTTTTGCCAGCTGCATCCATGTAGCTCCTGCTCCCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR CCA 90 bp CTGGGAAGTTTTCCTTCAACATCGTGCCTTACAGAGACTGGGGTTGACAGCTTAAGATGCTGTTGGTCTTaGAAAGGATGTAGAGCGTCT +
Preference number: 4 (lower is better)
Translates to: LGSFPSTSCLTETGVDSLRCCWS*KGCRAS
Trigger: AGACGCTCTACATCCTTTCCAAGACCAACAGCATCT...TAAGCTGTCAACCCCAGTCTCTGTAAGGCACGATGTTGAAGGAAAACTTCCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
3UTR CAA 72 bp AGTCTCACCTCTCCAAGTTCACCAGGAACTATGTCTTaGGCACCAGCTGTCAATTCTGGGAAGTTTTCCTTC +
Preference number: 4 (lower is better)
Translates to: SLTSPSSPGTMS*APAVNSGKFSF
Trigger: GAAGGAAAACTTCCCAGAATTGACAGCTGGTGCCAAAGACATAGTTCCTGGTGAACTTGGAGAGGTGAGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR TCA 90 bp CATCTTTTATTGGATACAGAACCAGAAATTCTGATGCCCGTGAATCCTTTTAAACAGGTCCTGCTTGAGTaGAGCCAGCAGTTCCACGCT +
Preference number: 4 (lower is better)
Translates to: HLLLDTEPEILMPVNPFKQVLLE*SQQFHA
Trigger: AGCGTGGAACTGCTGGCTTCACTCAAGCAGGACCTG...TTTAAAAGGATTCACGGGCATCAGAATTTCTGGTTCTGTATCCAATAAAAGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR GCA 90 bp CATCTTTTATTGGATACAGAACCAGAAATTCTGATGCCCGTGAATCCTTTTAAAAATGTCTCTGCAGCCTaGACCCAGGGCCCAGATCAC +
Preference number: 4 (lower is better)
Translates to: HLLLDTEPEILMPVNPFKNVSAA*TQGPDH
Trigger: GTGATCTGGGCCCTGGGTGCAGGCTGCAGAGACATT...TTTAAAAGGATTCACGGGCATCAGAATTTCTGGTTCTGTATCCAATAAAAGATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR GCA 90 bp TACACACACTACACAGTAATATATACAGAGAGAGATGCTGGCCTGAGCCAAGGCCTCTTTGAAGTAATCTaGAATCCCAATCTGCACCAC +
Preference number: 4 (lower is better)
Translates to: YTHYTVIYTERDAGLSQGLFEVI*NPNLHH
Trigger: GTGGTGCAGATTGGGATTGCAGATTACTTCAAAGAG...GCCTTGGCTCAGGCCAGCATCTCTCTCTGTATATATTACTGTGTAGTGTGTGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR CCA 90 bp CATCTTTTATTGGATACAGAACCAGAAATTCTGATGCCCGTGAATCCTTTTAAACGGCGTTGCCAGTTCTaGATGGCCTGTCGTCTTAGG +
Preference number: 4 (lower is better)
Translates to: HLLLDTEPEILMPVNPFKRRCQF*MACRLR
Trigger: CCTAAGACGACAGGCCATCCAGAACTGGCAACGCCG...TTTAAAAGGATTCACGGGCATCAGAATTTCTGGTTCTGTATCCAATAAAAGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR TCA 90 bp CATCTTTTATTGGATACAGAACCAGAAATTCTGATGCCCGTGAATCCTTTTAAATGTGCTTGGCACAGCTaGGCCTGCATGATGTTCTCG +
Preference number: 4 (lower is better)
Translates to: HLLLDTEPEILMPVNPFKCAWHS*ACMMFS
Trigger: CGAGAACATCATGCAGGCTCAGCTGTGCCAAGCACA...TTTAAAAGGATTCACGGGCATCAGAATTTCTGGTTCTGTATCCAATAAAAGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR GCA 90 bp CATCTTTTATTGGATACAGAACCAGAAATTCTGATGCCCGTGAATCCTTTTAAACTCTTTGAAGTAATCTaGAATCCCAATCTGCACCAC +
Preference number: 4 (lower is better)
Translates to: HLLLDTEPEILMPVNPFKLFEVI*NPNLHH
Trigger: GTGGTGCAGATTGGGATTGCAGATTACTTCAAAGAG...TTTAAAAGGATTCACGGGCATCAGAATTTCTGGTTCTGTATCCAATAAAAGATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS GCA 90 bp GCAGCAGGTGCGGCCCCGCGGGCGAGGGCCCGGTCGCCTGTTCCTTaGCCTGGAAGGACGTGCTCTCAAAGACCTCACGCCGGGCCCCGG +
Preference number: 5 (lower is better)
Translates to: AAGAAPRARARSPVP*PGRTCSQRPHAGPR
Trigger: CCGGGGCCCGGCGTGAGGTCTTTGAGAGCACGTCCTTCCAGGGCAAGGAACAGGCGACCGGGCCCTCGCCCGCGGGGCCGCACCTGCTGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS GCA 90 bp TACTCCAGGTGCGCGCGCAGCGACGATAGGCTCCGGAAGCGCTTATaGTCCCCGCAGCGCGGGCAGCGGTACGGTAGGTCCAGCGAGGCC +
Preference number: 5 (lower is better)
Translates to: YSRCARSDDRLRKRL*SPQRGQRYGRSSEA
Trigger: GGCCTCGCTGGACCTACCGTACCGCTGCCCGCGCTGCGGGGAGCATAAGCGCTTCCGGAGCCTATCGTCGCTGCGCGCGCACCTGGAGTA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS GCA 90 bp CGCTCCAGCTCCGCCTGTAGCCGACCCACCTGGCCCGCGATCTTCTaGTCCACCTCCTCGCTCAGCCGCTCTAGTCTCCGGTCCACCTCC +
Preference number: 5 (lower is better)
Translates to: RSSSACSRPTWPAIF*STSSLSRSSLRSTS
Trigger: GGAGGTGGACCGGAGACTAGAGCGGCTGAGCGAGGAGGTGGAGCAGAAGATCGCGGGCCAGGTGGGTCGGCTACAGGCGGAGCTGGAGCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS GCA 90 bp TGGAGCGTGAGGGGCTACCTCTCTCCACCCGACGGCCTCGCCCGCTaGCTCCTTCAGGACGTGCAGAGAGCCGGCAGCTGTTCAAGGGGC +
Preference number: 5 (lower is better)
Translates to: WSVRGYLSPPDGLAR*LLQDVQRAGSCSRG
Trigger: GCCCCTTGAACAGCTGCCGGCTCTCTGCACGTCCTGAAGGAGGCAGCGGGCGAGGCCGTCGGGTGGAGAGAGGTAGCCCCTCACGCTCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS CCA 90 bp GAACTACGAGGGGCCTGGGACCGCTCTGAACCACCGTTGGTAGCCTaGGCCCGTGAACCCAAGCCCCCAGGGCCACTGTCCTCCGAGGGC +
Preference number: 5 (lower is better)
Translates to: ELRGAWDRSEPPLVA*AREPKPPGPLSSEG
Trigger: GCCCTCGGAGGACAGTGGCCCTGGGGGCTTGGGTTCACGGGCCCAGGCTACCAACGGTGGTTCAGAGCGGTCCCAGGCCCCTCGTAGTTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS GCA 90 bp GGGGTGAAGTGGCGCCACCTGGAGGGAGACAATGTCTCTGCAGCCTaGACCCAGGGCCCAGATCACCTCATGGCCGACGGGGTCCGTGGC +
Preference number: 5 (lower is better)
Translates to: GVKWRHLEGDNVSAA*TQGPDHLMADGVRG
Trigger: GCCACGGACCCCGTCGGCCATGAGGTGATCTGGGCCCTGGGTGCAGGCTGCAGAGACATTGTCTCCCTCCAGGTGGCGCCACTTCACCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS TCA 90 bp GATCTTAAGGCGTGCCAGGCCCTCTTCGTAGGCGACGTCCGCAGGTaGTGGCGACGCCGGCGATGCAGAGGAGGGCCCGGAACAAGGACC +
Preference number: 5 (lower is better)
Translates to: DLKACQALFVGDVRR*WRRRRCRGGPGTRT
Trigger: GGTCCTTGTTCCGGGCCCTCCTCTGCATCGCCGGCGTCGCCATCACCTGCGGACGTCGCCTACGAAGAGGGCCTGGCACGCCTTAAGATC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS GCA 90 bp AGGACCAGGGCCAGGTCCGGGTGGCGGCGTCGAGCAGGCAGAGGATaGCACGGACTTGCGCGCAAACAGCTCGCCGAGTGGGATTTCGAT +
Preference number: 5 (lower is better)
Translates to: RTRARSGWRRRAGRG*HGLARKQLAEWDFD
Trigger: ATCGAAATCCCACTCGGCGAGCTGTTTGCGCGCAAGTCCGTGGCATCCTCTGCCTGCTCGACGCCGCCACCCGGACCTGGCCCTGGTCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS GCA 90 bp GCTGGCAGGGGTGAAGTGGCGCCACCTGGAGGGAGACAATGTCTCTaGAGCCTGCACCCAGGGCCCAGATCACCTCATGGCCGACGGGGT +
Preference number: 5 (lower is better)
Translates to: AGRGEVAPPGGRQCL*SLHPGPRSPHGRRG
Trigger: ACCCCGTCGGCCATGAGGTGATCTGGGCCCTGGGTGCAGGCTGCAGAGACATTGTCTCCCTCCAGGTGGCGCCACTTCACCCCTGCCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS CCA 90 bp CCCTGTACCCCACAGCCGGCACCACCTACGCCCAGGGCCCGGAGGTaGGGCCAACAGCGTCCAATCATCTGCAGGCAACGGTTGCTGAAC +
Preference number: 5 (lower is better)
Translates to: PCTPQPAPPTPRARR*GQQRPIICRQRLLN
Trigger: GTTCAGCAACCGTTGCCTGCAGATGATTGGACGCTGTTGGCCCCACCTCCGGGCCCTGGGCGTAGGTGGTGCCGGCTGTGGGGTACAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS TCA 90 bp GGAGGTGGGGCCAACAGCGTCCAATCATCTGCAGGCAACGGTTGCTaGACCGGGTGGGCTGCTGGCAGGGGTGAAGTGGCGCCACCTGGA +
Preference number: 5 (lower is better)
Translates to: GGGANSVQSSAGNGC*TGWAAGRGEVAPPG
Trigger: TCCAGGTGGCGCCACTTCACCCCTGCCAGCAGCCCACCCGGTTCAGCAACCGTTGCCTGCAGATGATTGGACGCTGTTGGCCCCACCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS GCA 90 bp CAGGTCCGGGTGGCGGCGTCGAGCAGGCAGAGGATGCCACGGACTTaGGCGCAAACAGCTCGCCGAGTGGGATTTCGATTTCGCGTAGCG +
Preference number: 5 (lower is better)
Translates to: QVRVAASSRQRMPRT*AQTARRVGFRFRVA
Trigger: CGCTACGCGAAATCGAAATCCCACTCGGCGAGCTGTTTGCGCGCAAGTCCGTGGCATCCTCTGCCTGCTCGACGCCGCCACCCGGACCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS CCA 90 bp CCCCCTCGGTGCTGTGACGACGAGGTCGGCGTTGCCAGTTCTGGATaGCCTGTCGTCTTAGGCCTGAACTACGAGGGGCCTGGGACCGCT +
Preference number: 5 (lower is better)
Translates to: PPRCCDDEVGVASSG*PVVLGLNYEGPGTA
Trigger: AGCGGTCCCAGGCCCCTCGTAGTTCAGGCCTAAGACGACAGGCCATCCAGAACTGGCAACGCCGACCTCGTCGTCACAGCACCGAGGGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS CCA 90 bp TCCAGTCCCTTCAGGCCTTCCCGGCAGACCTCAGCCGCCACCTCCTaGGTAATCTCTGACACGTGGTCCAGCTCCAGGACCTGCAGCCGC +
Preference number: 5 (lower is better)
Translates to: SSPFRPSRQTSAATS*VISDTWSSSRTCSR
Trigger: GCGGCTGCAGGTCCTGGAGCTGGACCACGTGTCAGAGATTACCCAGGAGGTGGCGGCTGAGGTCTGCCGGGAAGGCCTGAAGGGACTGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS TCA 90 bp CGGGAGCCCACATCCGAAACGTCACCCTCCTCCCCCTCGGTGCTGTaGCGACGAGGTCGGCGTTGCCAGTTCTGGATGGCCTGTCGTCTT +
Preference number: 5 (lower is better)
Translates to: REPTSETSPSSPSVL*RRGRRCQFWMACRL
Trigger: AAGACGACAGGCCATCCAGAACTGGCAACGCCGACCTCGTCGTCACAGCACCGAGGGGGAGGAGGGTGACGTTTCGGATGTGGGCTCCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS TCA 90 bp GCAGGGCACGGCAGTAGCAGCTGGCCAGCCAGAGGGACCGGTCAGTaGGGATGTTGGGGCAGTGGGAGATTCGCAGGATCAGCAGGTTCC +
Preference number: 5 (lower is better)
Translates to: AGHGSSSWPARGTGQ*GCWGSGRFAGSAGS
Trigger: GGAACCTGCTGATCCTGCGAATCTCCCACTGCCCCAACATCCTCACTGACCGGTCCCTCTGGCTGGCCAGCTGCTACTGCCGTGCCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS GCA 90 bp GTTGGGGCAGTGGGAGATTCGCAGGATCAGCAGGTTCCCACCAGCTaGCTTCAGCAGGGACTCCAGCCCTGCTTCAAGGCAGCCCCGGGT +
Preference number: 5 (lower is better)
Translates to: VGAVGDSQDQQVPTS*LQQGLQPCFKAAPG
Trigger: ACCCGGGGCTGCCTTGAAGCAGGGCTGGAGTCCCTGCTGAAGGCAGCTGGTGGGAACCTGCTGATCCTGCGAATCTCCCACTGCCCCAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR CAA 90 bp CAGGGCTGTGATAATGGCAGAGGTCCAGAGCTGGCCTCCTGGTGGGGTACCTGCTGTTGCAGCCGCAGCTaGGCACTGGCCTCCCGAGCT +
Preference number: 5 (lower is better)
Translates to: QGCDNGRGPELASWWGTCCCSRS*ALASRA
Trigger: AGCTCGGGAGGCCAGTGCCAAGCTGCGGCTGCAACA...GCAGGTACCCCACCAGGAGGCCAGCTCTGGACCTCTGCCATTATCACAGCCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS TCA 90 bp TTCCTCTGGCCGGGGCAGCTCCAGACTGTCACTGTCATAGCAGCCTaGGCTCTGGGATGCAGCTGGCACACGACTGGAGGCCCCTGTGCT +
Preference number: 5 (lower is better)
Translates to: FLWPGQLQTVTVIAA*ALGCSWHTTGGPCA
Trigger: AGCACAGGGGCCTCCAGTCGTGTGCCAGCTGCATCCCAGAGCTCAGGCTGCTATGACAGTGACAGTCTGGAGCTGCCCCGGCCAGAGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS GCA 90 bp GCCACAGCTGCTGCTGATGACCTGCAACTGGCGCTCGGCCCTGTCTaGACGCTCCAGGAGCTCCTCGATGAACTGTTGCAGCCGCAGCTT +
Preference number: 5 (lower is better)
Translates to: ATAAADDLQLALGPV*TLQELLDELLQPQL
Trigger: AAGCTGCGGCTGCAACAGTTCATCGAGGAGCTCCTGGAGCGTGCAGACAGGGCCGAGCGCCAGTTGCAGGTCATCAGCAGCAGCTGTGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS CCA 90 bp CAGCGGCTGCAGCGGCGGCCGCGCCGTCGCAGATGCTGTTGGTCTTaGAAAGGATGTAGAGCGTCTCGTAGGTGTGGCTGTACTCCAGGT +
Preference number: 5 (lower is better)
Translates to: QRLQRRPRRRRCCWS*KGCRASRRCGCTPG
Trigger: ACCTGGAGTACAGCCACACCTACGAGACGCTCTACATCCTTTCCAAGACCAACAGCATCTGCGACGGCGCGGCCGCCGCTGCAGCCGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS CCA 90 bp CAGTTCTGGATGGCCTGTCGTCTTAGGCCTGAACTACGAGGGGCCTaGGACCGCTCTGAACCACCGTTGGTAGCCTGGGCCCGTGAACCC +
Preference number: 5 (lower is better)
Translates to: QFWMACRLRPELRGA*DRSEPPLVAWAREP
Trigger: GGGTTCACGGGCCCAGGCTACCAACGGTGGTTCAGAGCGGTCCCAGGCCCCTCGTAGTTCAGGCCTAAGACGACAGGCCATCCAGAACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS TCA 90 bp CAGGCCTTCCCGGCAGACCTCAGCCGCCACCTCCTGGGTAATCTCTaGCACGTGGTCCAGCTCCAGGACCTGCAGCCGCATACAGTTTCT +
Preference number: 5 (lower is better)
Translates to: QAFPADLSRHLLGNL*HVVQLQDLQPHTVS
Trigger: AGAAACTGTATGCGGCTGCAGGTCCTGGAGCTGGACCACGTGTCAGAGATTACCCAGGAGGTGGCGGCTGAGGTCTGCCGGGAAGGCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS GCA 90 bp CTCGATGAACTGTTGCAGCCGCAGCTTGGCACTGGCCTCCCGAGCTaGCGTCTCCTTCAGGAACTGGTCGATCTGCACCACCTCCTGCTG +
Preference number: 5 (lower is better)
Translates to: LDELLQPQLGTGLPS*RLLQELVDLHHLLL
Trigger: CAGCAGGAGGTGGTGCAGATCGACCAGTTCCTGAAGGAGACGGCAGCTCGGGAGGCCAGTGCCAAGCTGCGGCTGCAACAGTTCATCGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS CCA 90 bp CAGACTCGGGCATTCTCAAGTAGCACTCTCGTCCAGACAGCGGGATaGCGGGCCACAAAGCGCCAGTCCCGACAGACCTCTGCTGCATGG +
Preference number: 5 (lower is better)
Translates to: QTRAFSSSTLVQTAG*RATKRQSRQTSAAW
Trigger: CCATGCAGCAGAGGTCTGTCGGGACTGGCGCTTTGTGGCCCGCCATCCCGCTGTCTGGACGAGAGTGCTACTTGAGAATGCCCGAGTCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR CAA 90 bp GGAGAGGAAAGTTGTGCTGTTGCCTGTGACTCCTTGGGGACAAGGCTGGGGAGGCCGGTCGCCTGTTCCTaGCCCTGGAAGGACGTGCTC +
Preference number: 5 (lower is better)
Translates to: GEESCAVACDSLGTRLGRPVACS*PWKDVL
Trigger: GAGCACGTCCTTCCAGGGCAAGGAACAGGCGACCGG...CCTCCCCAGCCTTGTCCCCAAGGAGTCACAGGCAACAGCACAACTTTCCTCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR CAA 90 bp GACAACCAGCAGCAGGTGTGTCAGCTCCTTGCTGGCTGTACCAGCAGGCCATTCCCGGTCGCCTGTTCCTaGCCCTGGAAGGACGTGCTC +
Preference number: 5 (lower is better)
Translates to: DNQQQVCQLLAGCTSRPFPVACS*PWKDVL
Trigger: GAGCACGTCCTTCCAGGGCAAGGAACAGGCGACCGG...GAATGGCCTGCTGGTACAGCCAGCAAGGAGCTGACACACCTGCTGCTGGTTGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR CAA 90 bp CCAAGGCTGGATGAGAAAGCAGGGCCACCAAGGGCAGCGAGACTGCCAAGTCATTGTTGCAGCCGCAGCTaGGCACTGGCCTCCCGAGCT +
Preference number: 5 (lower is better)
Translates to: PRLDEKAGPPRAARLPSHCCSRS*ALASRA
Trigger: AGCTCGGGAGGCCAGTGCCAAGCTGCGGCTGCAACA...ATGACTTGGCAGTCTCGCTGCCCTTGGTGGCCCTGCTTTCTCATCCAGCCTTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS GCA 90 bp AGGCCCCTGTGCTGGGAGAGGAGCCATGCCGTGATACGGCGTATGTaGTTGGCACAGCTGAGCCTGCATGATGTTCTCGCATTCTGCCGG +
Preference number: 5 (lower is better)
Translates to: RPLCWERSHAVIRRM*LAQLSLHDVLAFCR
Trigger: CCGGCAGAATGCGAGAACATCATGCAGGCTCAGCTGTGCCAAGCACATACGCCGTATCACGGCATGGCTCCTCTCCCAGCACAGGGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS GCA 90 bp GACAGCGGGATGGCGGGCCACAAAGCGCCAGTCCCGACAGACCTCTaGTGCATGGAGCAGTGTCCGGGTATCCAGGTAGGTGAAGATACA +
Preference number: 5 (lower is better)
Translates to: DSGMAGHKAPVPTDL*CMEQCPGIQVGEDT
Trigger: TGTATCTTCACCTACCTGGATACCCGGACACTGCTCCATGCAGCAGAGGTCTGTCGGGACTGGCGCTTTGTGGCCCGCCATCCCGCTGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS CCA 90 bp TCCCGGCAGACCTCAGCCGCCACCTCCTGGGTAATCTCTGACACGTaGTCCAGCTCCAGGACCTGCAGCCGCATACAGTTTCTTGCAAGT +
Preference number: 5 (lower is better)
Translates to: SRQTSAATSWVISDT*SSSRTCSRIQFLAS
Trigger: ACTTGCAAGAAACTGTATGCGGCTGCAGGTCCTGGAGCTGGACCACGTGTCAGAGATTACCCAGGAGGTGGCGGCTGAGGTCTGCCGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR CAA 90 bp ATGAGAAAGCAGGGCCACCAAGGGCAGCGAGACTGCCAAGTCATCAAGCTGGTGCGCTCTGAACCACCGTaGGTAGCCTGGGCCCGTGAA +
Preference number: 5 (lower is better)
Translates to: MRKQGHQGQRDCQVIKLVRSEPP*VAWARE
Trigger: TTCACGGGCCCAGGCTACCAACGGTGGTTCAGAGCG...CACCAGCTTGATGACTTGGCAGTCTCGCTGCCCTTGGTGGCCCTGCTTTCTCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR CAA 90 bp GGAGAGGAAAGTTGTGCTGTTGCCTGTGACTCCTTGGGGACAAGGCTGGGGAGGGGGCTGATGACCTCATaGGAGCGTGAGGGGCTACCT +
Preference number: 5 (lower is better)
Translates to: GEESCAVACDSLGTRLGRGLMTS*EREGLP
Trigger: AGGTAGCCCCTCACGCTCCAATGAGGTCATCAGCCC...CCTCCCCAGCCTTGTCCCCAAGGAGTCACAGGCAACAGCACAACTTTCCTCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR CAA 90 bp GACAACCAGCAGCAGGTGTGTCAGCTCCTTGCTGGCTGTACCAGCAGGCCATTCGGGCTGATGACCTCATaGGAGCGTGAGGGGCTACCT +
Preference number: 5 (lower is better)
Translates to: DNQQQVCQLLAGCTSRPFGLMTS*EREGLP
Trigger: AGGTAGCCCCTCACGCTCCAATGAGGTCATCAGCCC...GAATGGCCTGCTGGTACAGCCAGCAAGGAGCTGACACACCTGCTGCTGGTTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR CAA 90 bp CCAAGGCTGGATGAGAAAGCAGGGCCACCAAGGGCAGCGAGACTGCCAAGTCATCGGGCATACTCCTCCTaGCTTTCCTTCTTCCCCCGC +
Preference number: 5 (lower is better)
Translates to: PRLDEKAGPPRAARLPSHRAYSS*LSFFPR
Trigger: GCGGGGGAAGAAGGAAAGCAAGGAGGAGTATGCCCG...ATGACTTGGCAGTCTCGCTGCCCTTGGTGGCCCTGCTTTCTCATCCAGCCTTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR CAA 90 bp GGAGAGGAAAGTTGTGCTGTTGCCTGTGACTCCTTGGGGACAAGGCTGGGGAGGCGGTCAGTGAGGATGTaGGGGCAGTGGGAGATTCGC +
Preference number: 5 (lower is better)
Translates to: GEESCAVACDSLGTRLGRRSVRM*GQWEIR
Trigger: GCGAATCTCCCACTGCCCCAACATCCTCACTGACCG...CCTCCCCAGCCTTGTCCCCAAGGAGTCACAGGCAACAGCACAACTTTCCTCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS TCA 90 bp GCTGCTTGCGGCTCAGCTCCTGTTCCTTATGCACCAGGTCCTGCTTaGGTGAAGCCAGCAGTTCCACGCTCACGTCCACTTGGCGTGAGA +
Preference number: 5 (lower is better)
Translates to: AACGSAPVPYAPGPA*VKPAVPRSRPLGVR
Trigger: TCTCACGCCAAGTGGACGTGAGCGTGGAACTGCTGGCTTCACTCAAGCAGGACCTGGTGCATAAGGAACAGGAGCTGAGCCGCAAGCAGC
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS GCA 90 bp TCCTGCTGCTTGCGGCTCAGCTCCTGTTCCTTATGCACCAGGTCCTaGTTGAGTGAAGCCAGCAGTTCCACGCTCACGTCCACTTGGCGT +
Preference number: 5 (lower is better)
Translates to: SCCLRLSSCSLCTRS*LSEASSSTLTSTWR
Trigger: ACGCCAAGTGGACGTGAGCGTGGAACTGCTGGCTTCACTCAAGCAGGACCTGGTGCATAAGGAACAGGAGCTGAGCCGCAAGCAGCAGGA
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS GCA 90 bp ATCTGCACCACCTCCTGCTGCTTGCGGCTCAGCTCCTGTTCCTTATaGACCAGGTCCTGCTTGAGTGAAGCCAGCAGTTCCACGCTCACG +
Preference number: 5 (lower is better)
Translates to: ICTTSCCLRLSSCSL*TRSCLSEASSSTLT
Trigger: CGTGAGCGTGGAACTGCTGGCTTCACTCAAGCAGGACCTGGTGCATAAGGAACAGGAGCTGAGCCGCAAGCAGCAGGAGGTGGTGCAGAT
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS GCA 90 bp GCCACCTCCTGGGTAATCTCTGACACGTGGTCCAGCTCCAGGACCTaGAGCCGCATACAGTTTCTTGCAAGTGATGCCAGGCCCTGTACC +
Preference number: 5 (lower is better)
Translates to: ATSWVISDTWSSSRT*SRIQFLASDARPCT
Trigger: GGTACAGGGCCTGGCATCACTTGCAAGAAACTGTATGCGGCTGCAGGTCCTGGAGCTGGACCACGTGTCAGAGATTACCCAGGAGGTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR CAA 90 bp ATACAGATGGGTTTGCACCCAGTCCAGGGTGTGGCACAGCTGGAGAAAACTGGCACCACCTCCTGCTGCTaGCGGCTCAGCTCCTGTTCC +
Preference number: 5 (lower is better)
Translates to: IQMGLHPVQGVAQLEKTGTTSCC*RLSSCS
Trigger: GGAACAGGAGCTGAGCCGCAAGCAGCAGGAGGTGGT...GCCAGTTTTCTCCAGCTGTGCCACACCCTGGACTGGGTGCAAACCCATCTGTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR CAA 90 bp GCCTGTGTTCTGCATTCAAGATCAGGGCTGGTGACAGAGCAGCAGGCCTTGGGACGGTCAGTGAGGATGTaGGGGCAGTGGGAGATTCGC +
Preference number: 5 (lower is better)
Translates to: ACVLHSRSGLVTEQQALGRSVRM*GQWEIR
Trigger: GCGAATCTCCCACTGCCCCAACATCCTCACTGACCG...TCCCAAGGCCTGCTGCTCTGTCACCAGCCCTGATCTTGAATGCAGAACACAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR CAA 90 bp TCCGCATGCCTGAAGACTAAGATGCCCAAGACTCAGCCAGGACACAGTGACCTGATCTGCAGGCAACGGTaGCTGAACCGGGTGGGCTGC +
Preference number: 5 (lower is better)
Translates to: SACLKTKMPKTQPGHSDLICRQR*LNRVGC
Trigger: GCAGCCCACCCGGTTCAGCAACCGTTGCCTGCAGAT...CAGGTCACTGTGTCCTGGCTGAGTCTTGGGCATCTTAGTCTTCAGGCATGCGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS GCA 90 bp GCTGCCGGGGCTTCAGGTTCTGTAATGTTAACGAGTGAGCCTGGGTaGACCACTGAGCCAACATCGCCAGGAACTTGGAACAGACTCGGG +
Preference number: 5 (lower is better)
Translates to: AAGASGSVMLTSEPG*TTEPTSPGTWNRLG
Trigger: CCCGAGTCTGTTCCAAGTTCCTGGCGATGTTGGCTCAGTGGTGCACCCAGGCTCACTCGTTAACATTACAGAACCTGAAGCCCCGGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR CAA 90 bp GAGCAAGCCACGCAACTCAGCGATGATGATAAACTGGGACAGGGCTATAGGATCTGTTGCAGCCGCAGCTaGGCACTGGCCTCCCGAGCT +
Preference number: 5 (lower is better)
Translates to: EQATQLSDDDKLGQGYRICCSRS*ALASRA
Trigger: AGCTCGGGAGGCCAGTGCCAAGCTGCGGCTGCAACA...GATCCTATAGCCCTGTCCCAGTTTATCATCATCGCTGAGTTGCGTGGCTTGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR CAA 90 bp GACAACCAGCAGCAGGTGTGTCAGCTCCTTGCTGGCTGTACCAGCAGGCCATTCGCCGCATACAGTTTCTaGCAAGTGATGCCAGGCCCT +
Preference number: 5 (lower is better)
Translates to: DNQQQVCQLLAGCTSRPFAAYSF*QVMPGP
Trigger: AGGGCCTGGCATCACTTGCAAGAAACTGTATGCGGC...GAATGGCCTGCTGGTACAGCCAGCAAGGAGCTGACACACCTGCTGCTGGTTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR CAA 90 bp CTTCACCCAACCTTAAGCCTTGTCCTTGGGCAAGGACTACAGCTGAACTCACTTCCGGTCGCCTGTTCCTaGCCCTGGAAGGACGTGCTC +
Preference number: 5 (lower is better)
Translates to: LHPTLSLVLGQGLQLNSLPVACS*PWKDVL
Trigger: GAGCACGTCCTTCCAGGGCAAGGAACAGGCGACCGG...AAGTGAGTTCAGCTGTAGTCCTTGCCCAAGGACAAGGCTTAAGGTTGGGTGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR CAA 90 bp CAAGATAGAAATGAGCACAGCACCCAGAAGCAGGGATGGCCCCCTTTGGAGAAATCTAGCTCTGCTGCCTaGCGCTCCAGCTCCGCCTGT +
Preference number: 5 (lower is better)
Translates to: QDRNEHSTQKQGWPPLEKSSSAA*RSSSAC
Trigger: ACAGGCGGAGCTGGAGCGCAAGGCAGCAGAGCTAGA...TTTCTCCAAAGGGGGCCATCCCTGCTTCTGGGTGCTGTGCTCATTTCTATCTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR CAA 90 bp CCCATTGGCTCTGTGACTGCTCAAGATAGAAATGAGCACAGCACCCAGAAGCAGTCTAGCTCTGCTGCCTaGCGCTCCAGCTCCGCCTGT +
Preference number: 5 (lower is better)
Translates to: PIGSVTAQDRNEHSTQKQSSSAA*RSSSAC
Trigger: ACAGGCGGAGCTGGAGCGCAAGGCAGCAGAGCTAGA...CTGCTTCTGGGTGCTGTGCTCATTTCTATCTTGAGCAGTCACAGAGCCAATGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR CAA 90 bp CAAGATAGAAATGAGCACAGCACCCAGAAGCAGGGATGGCCCCCTTTGGAGAAAACCACCTCCTGCTGCTaGCGGCTCAGCTCCTGTTCC +
Preference number: 5 (lower is better)
Translates to: QDRNEHSTQKQGWPPLEKTTSCC*RLSSCS
Trigger: GGAACAGGAGCTGAGCCGCAAGCAGCAGGAGGTGGT...TTTCTCCAAAGGGGGCCATCCCTGCTTCTGGGTGCTGTGCTCATTTCTATCTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR CAA 90 bp CAGCAATGGAAGGGACTTGTGTGGCAGCAACATACAGATGGGTTTGCACCCAGTACCACCTCCTGCTGCTaGCGGCTCAGCTCCTGTTCC +
Preference number: 5 (lower is better)
Translates to: QQWKGLVWQQHTDGFAPSTTSCC*RLSSCS
Trigger: GGAACAGGAGCTGAGCCGCAAGCAGCAGGAGGTGGT...ACTGGGTGCAAACCCATCTGTATGTTGCTGCCACACAAGTCCCTTCCATTGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR CAA 90 bp GAGCAAGCCACGCAACTCAGCGATGATGATAAACTGGGACAGGGCTATAGGATCACGACGAGGTCGGCGTaGCCAGTTCTGGATGGCCTG +
Preference number: 5 (lower is better)
Translates to: EQATQLSDDDKLGQGYRITTRSA*PVLDGL
Trigger: CAGGCCATCCAGAACTGGCAACGCCGACCTCGTCGT...GATCCTATAGCCCTGTCCCAGTTTATCATCATCGCTGAGTTGCGTGGCTTGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR CAA 90 bp CCCATTGGCTCTGTGACTGCTCAAGATAGAAATGAGCACAGCACCCAGAAGCAGACGACGAGGTCGGCGTaGCCAGTTCTGGATGGCCTG +
Preference number: 5 (lower is better)
Translates to: PIGSVTAQDRNEHSTQKQTTRSA*PVLDGL
Trigger: CAGGCCATCCAGAACTGGCAACGCCGACCTCGTCGT...CTGCTTCTGGGTGCTGTGCTCATTTCTATCTTGAGCAGTCACAGAGCCAATGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR CAA 90 bp GCCTGTGTTCTGCATTCAAGATCAGGGCTGGTGACAGAGCAGCAGGCCTTGGGAAGGGCAGCTCGCATCTaGAGGATTTCTGGGCTGATG +
Preference number: 5 (lower is better)
Translates to: ACVLHSRSGLVTEQQALGRAARI*RISGLM
Trigger: CATCAGCCCAGAAATCCTCAAGATGCGAGCTGCCCT...TCCCAAGGCCTGCTGCTCTGTCACCAGCCCTGATCTTGAATGCAGAACACAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR CAA 90 bp CAAGATAGAAATGAGCACAGCACCCAGAAGCAGGGATGGCCCCCTTTGGAGAAAATCTGCAGGCAACGGTaGCTGAACCGGGTGGGCTGC +
Preference number: 5 (lower is better)
Translates to: QDRNEHSTQKQGWPPLEKICRQR*LNRVGC
Trigger: GCAGCCCACCCGGTTCAGCAACCGTTGCCTGCAGAT...TTTCTCCAAAGGGGGCCATCCCTGCTTCTGGGTGCTGTGCTCATTTCTATCTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR CAA 90 bp GCCTGTGTTCTGCATTCAAGATCAGGGCTGGTGACAGAGCAGCAGGCCTTGGGAGCCGCATACAGTTTCTaGCAAGTGATGCCAGGCCCT +
Preference number: 5 (lower is better)
Translates to: ACVLHSRSGLVTEQQALGAAYSF*QVMPGP
Trigger: AGGGCCTGGCATCACTTGCAAGAAACTGTATGCGGC...TCCCAAGGCCTGCTGCTCTGTCACCAGCCCTGATCTTGAATGCAGAACACAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR CAA 90 bp CCCTGTCCGTGGGTCAGAATGCCTGGAACCAGCATCTTGGTCCTGCCTCCTGCCCAACCACCTTCTACCTaGATGTGCAGAATCTTCGAG +
Preference number: 5 (lower is better)
Translates to: PCPWVRMPGTSILVLPPAQPPST*MCRIFE
Trigger: CTCGAAGATTCTGCACATCAAGGTAGAAGGTGGTTG...GGCAGGAGGCAGGACCAAGATGCTGGTTCCAGGCATTCTGACCCACGGACAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR CAA 90 bp CTTCACCCAACCTTAAGCCTTGTCCTTGGGCAAGGACTACAGCTGAACTCACTTCGCTCTGAACCACCGTaGGTAGCCTGGGCCCGTGAA +
Preference number: 5 (lower is better)
Translates to: LHPTLSLVLGQGLQLNSLRSEPP*VAWARE
Trigger: TTCACGGGCCCAGGCTACCAACGGTGGTTCAGAGCG...AAGTGAGTTCAGCTGTAGTCCTTGCCCAAGGACAAGGCTTAAGGTTGGGTGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR CAA 90 bp ACAGGGAGCAGGAGCTACATGGATGCAGCTGGCAAAACAACTGACCTACTAAAGCGCTCTGAACCACCGTaGGTAGCCTGGGCCCGTGAA +
Preference number: 5 (lower is better)
Translates to: TGSRSYMDAAGKTTDLLKRSEPP*VAWARE
Trigger: TTCACGGGCCCAGGCTACCAACGGTGGTTCAGAGCG...CTTTAGTAGGTCAGTTGTTTTGCCAGCTGCATCCATGTAGCTCCTGCTCCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR CAA 90 bp CTTCACCCAACCTTAAGCCTTGTCCTTGGGCAAGGACTACAGCTGAACTCACTTACGACGAGGTCGGCGTaGCCAGTTCTGGATGGCCTG +
Preference number: 5 (lower is better)
Translates to: LHPTLSLVLGQGLQLNSLTTRSA*PVLDGL
Trigger: CAGGCCATCCAGAACTGGCAACGCCGACCTCGTCGT...AAGTGAGTTCAGCTGTAGTCCTTGCCCAAGGACAAGGCTTAAGGTTGGGTGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR CAA 90 bp ACAGAGCAAGCCACGCAACTCAGCGATGATGATAAACTGGGACAGGGCTATAGGGGGCTGATGACCTCATaGGAGCGTGAGGGGCTACCT +
Preference number: 5 (lower is better)
Translates to: TEQATQLSDDDKLGQGYRGLMTS*EREGLP
Trigger: AGGTAGCCCCTCACGCTCCAATGAGGTCATCAGCCC...CCTATAGCCCTGTCCCAGTTTATCATCATCGCTGAGTTGCGTGGCTTGCTCTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR CAA 90 bp CATGCCCCAATTTACACGTGCTGTTTGGCAGGGGATGGGAGTGGAAGAGATGGCAGGGCAGCTCGCATCTaGAGGATTTCTGGGCTGATG +
Preference number: 5 (lower is better)
Translates to: HAPIYTCCLAGDGSGRDGRAARI*RISGLM
Trigger: CATCAGCCCAGAAATCCTCAAGATGCGAGCTGCCCT...GCCATCTCTTCCACTCCCATCCCCTGCCAAACAGCACGTGTAAATTGGGGCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR CAA 90 bp CAAGATAGAAATGAGCACAGCACCCAGAAGCAGGGATGGCCCCCTTTGGAGAAACGGGCATACTCCTCCTaGCTTTCCTTCTTCCCCCGC +
Preference number: 5 (lower is better)
Translates to: QDRNEHSTQKQGWPPLEKRAYSS*LSFFPR
Trigger: GCGGGGGAAGAAGGAAAGCAAGGAGGAGTATGCCCG...TTTCTCCAAAGGGGGCCATCCCTGCTTCTGGGTGCTGTGCTCATTTCTATCTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR CAA 90 bp ATGAGAAAGCAGGGCCACCAAGGGCAGCGAGACTGCCAAGTCATCAAGCTGGTGGCAGGGCCTGGAGTTTaGTCACCATGTCCTCAAACA +
Preference number: 5 (lower is better)
Translates to: MRKQGHQGQRDCQVIKLVAGPGV*SPCPQT
Trigger: TGTTTGAGGACATGGTGACAAAACTCCAGGCCCTGC...CACCAGCTTGATGACTTGGCAGTCTCGCTGCCCTTGGTGGCCCTGCTTTCTCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR CAA 90 bp ACAGGGAGCAGGAGCTACATGGATGCAGCTGGCAAAACAACTGACCTACTAAAGCGGTCAGTGAGGATGTaGGGGCAGTGGGAGATTCGC +
Preference number: 5 (lower is better)
Translates to: TGSRSYMDAAGKTTDLLKRSVRM*GQWEIR
Trigger: GCGAATCTCCCACTGCCCCAACATCCTCACTGACCG...CTTTAGTAGGTCAGTTGTTTTGCCAGCTGCATCCATGTAGCTCCTGCTCCCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR CAA 90 bp GGAGAGGAAAGTTGTGCTGTTGCCTGTGACTCCTTGGGGACAAGGCTGGGGAGGCAACCACCTTCTACCTaGATGTGCAGAATCTTCGAG +
Preference number: 5 (lower is better)
Translates to: GEESCAVACDSLGTRLGRQPPST*MCRIFE
Trigger: CTCGAAGATTCTGCACATCAAGGTAGAAGGTGGTTG...CCTCCCCAGCCTTGTCCCCAAGGAGTCACAGGCAACAGCACAACTTTCCTCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR CAA 90 bp ACAGAGCAAGCCACGCAACTCAGCGATGATGATAAACTGGGACAGGGCTATAGGAGGGCAGCTCGCATCTaGAGGATTTCTGGGCTGATG +
Preference number: 5 (lower is better)
Translates to: TEQATQLSDDDKLGQGYRRAARI*RISGLM
Trigger: CATCAGCCCAGAAATCCTCAAGATGCGAGCTGCCCT...CCTATAGCCCTGTCCCAGTTTATCATCATCGCTGAGTTGCGTGGCTTGCTCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR CAA 90 bp CAGCAATGGAAGGGACTTGTGTGGCAGCAACATACAGATGGGTTTGCACCCAGTGCAGGGCCTGGAGTTTaGTCACCATGTCCTCAAACA +
Preference number: 5 (lower is better)
Translates to: QQWKGLVWQQHTDGFAPSAGPGV*SPCPQT
Trigger: TGTTTGAGGACATGGTGACAAAACTCCAGGCCCTGC...ACTGGGTGCAAACCCATCTGTATGTTGCTGCCACACAAGTCCCTTCCATTGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR CAA 90 bp GAGCAAGCCACGCAACTCAGCGATGATGATAAACTGGGACAGGGCTATAGGATCGCAGGGCCTGGAGTTTaGTCACCATGTCCTCAAACA +
Preference number: 5 (lower is better)
Translates to: EQATQLSDDDKLGQGYRIAGPGV*SPCPQT
Trigger: TGTTTGAGGACATGGTGACAAAACTCCAGGCCCTGC...GATCCTATAGCCCTGTCCCAGTTTATCATCATCGCTGAGTTGCGTGGCTTGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS GCA 90 bp AAACAGCTTCTGGGCCTCGGGACTGCTGGGCTCTTTGAAGTAATCTaGAATCCCAATCTGCACCACAATGGATTTAAGGTTCCGGCAGAT +
Preference number: 5 (lower is better)
Translates to: KQLLGLGTAGLFEVI*NPNLHHNGFKVPAD
Trigger: ATCTGCCGGAACCTTAAATCCATTGTGGTGCAGATTGGGATTGCAGATTACTTCAAAGAGCCCAGCAGTCCCGAGGCCCAGAAGCTGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR CAA 90 bp CAAGATAGAAATGAGCACAGCACCCAGAAGCAGGGATGGCCCCCTTTGGAGAAACAACCACCTTCTACCTaGATGTGCAGAATCTTCGAG +
Preference number: 5 (lower is better)
Translates to: QDRNEHSTQKQGWPPLEKQPPST*MCRIFE
Trigger: CTCGAAGATTCTGCACATCAAGGTAGAAGGTGGTTG...TTTCTCCAAAGGGGGCCATCCCTGCTTCTGGGTGCTGTGCTCATTTCTATCTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS-3UTR CAA 90 bp CATCTTTTATTGGATACAGAACCAGAAATTCTGATGCCCGTGAATCCTTTTAAAATCTGCAGGCAACGGTaGCTGAACCGGGTGGGCTGC +
Preference number: 5 (lower is better)
Translates to: HLLLDTEPEILMPVNPFKICRQR*LNRVGC
Trigger: GCAGCCCACCCGGTTCAGCAACCGTTGCCTGCAGAT...TTTAAAAGGATTCACGGGCATCAGAATTTCTGGTTCTGTATCCAATAAAAGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS CAA 90 bp TGCAGCAGGTGCGGCCCCGCGGGCGAGGGCCCGGTCGCCTGTTCCTaGCCCTGGAAGGACGTGCTCTCAAAGACCTCACGCCGGGCCCCG +
Preference number: 6 (lower is better)
Translates to: CSRCGPAGEGPVACS*PWKDVLSKTSRRAP
Trigger: CGGGGCCCGGCGTGAGGTCTTTGAGAGCACGTCCTTCCAGGGCAAGGAACAGGCGACCGGGCCCTCGCCCGCGGGGCCGCACCTGCTGCA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS TCA 72 bp GCGTGCCAGGCCCTCTTCGTAGGCGACGTCCGCAGGTaGTGGCGACGCCGGCGATGCAGAGGAGGGCCCGGA +
Preference number: 6 (lower is better)
Translates to: ACQALFVGDVRR*WRRRRCRGGPG
Trigger: TCCGGGCCCTCCTCTGCATCGCCGGCGTCGCCATCACCTGCGGACGTCGCCTACGAAGAGGGCCTGGCACGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS GCA 72 bp TGCGCGCGCAGCGACGATAGGCTCCGGAAGCGCTTATaGTCCCCGCAGCGCGGGCAGCGGTACGGTAGGTCC +
Preference number: 6 (lower is better)
Translates to: CARSDDRLRKRL*SPQRGQRYGRS
Trigger: GGACCTACCGTACCGCTGCCCGCGCTGCGGGGAGCATAAGCGCTTCCGGAGCCTATCGTCGCTGCGCGCGCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS GCA 72 bp GCCAGGTCCGGGTGGCGGCGTCGAGCAGGCAGAGGATaGCACGGACTTGCGCGCAAACAGCTCGCCGAGTGG +
Preference number: 6 (lower is better)
Translates to: ARSGWRRRAGRG*HGLARKQLAEW
Trigger: CCACTCGGCGAGCTGTTTGCGCGCAAGTCCGTGGCATCCTCTGCCTGCTCGACGCCGCCACCCGGACCTGGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS GCA 72 bp CACCCGACGGCCTCGCCCGCTGCCTCCTTCAGGACGTaGAGAGAGCCGGCAGCTGTTCAAGGGGCCAGCCAC +
Preference number: 6 (lower is better)
Translates to: HPTASPAASFRT*REPAAVQGASH
Trigger: GTGGCTGGCCCCTTGAACAGCTGCCGGCTCTCTGCACGTCCTGAAGGAGGCAGCGGGCGAGGCCGTCGGGTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS CCA 72 bp GGAGGGCCCGGAACAAGGACCAGGGCCAGGTCCGGGTaGCGGCGTCGAGCAGGCAGAGGATGCCACGGACTT +
Preference number: 6 (lower is better)
Translates to: GGPGTRTRARSG*RRRAGRGCHGL
Trigger: AAGTCCGTGGCATCCTCTGCCTGCTCGACGCCGCCACCCGGACCTGGCCCTGGTCCTTGTTCCGGGCCCTCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS CCA 72 bp GGGGCCTGGGACCGCTCTGAACCACCGTTGGTAGCCTaGGCCCGTGAACCCAAGCCCCCAGGGCCACTGTCC +
Preference number: 6 (lower is better)
Translates to: GAWDRSEPPLVA*AREPKPPGPLS
Trigger: GGACAGTGGCCCTGGGGGCTTGGGTTCACGGGCCCAGGCTACCAACGGTGGTTCAGAGCGGTCCCAGGCCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS CAA 72 bp TGCGGCCCCGCGGGCGAGGGCCCGGTCGCCTGTTCCTaGCCCTGGAAGGACGTGCTCTCAAAGACCTCACGC +
Preference number: 6 (lower is better)
Translates to: CGPAGEGPVACS*PWKDVLSKTSR
Trigger: GCGTGAGGTCTTTGAGAGCACGTCCTTCCAGGGCAAGGAACAGGCGACCGGGCCCTCGCCCGCGGGGCCGCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS GCA 72 bp AGGGCCCGGTCGCCTGTTCCTTGCCCTGGAAGGACGTaGTCTCAAAGACCTCACGCCGGGCCCCGGGGACAG +
Preference number: 6 (lower is better)
Translates to: RARSPVPCPGRT*SQRPHAGPRGQ
Trigger: CTGTCCCCGGGGCCCGGCGTGAGGTCTTTGAGAGCACGTCCTTCCAGGGCAAGGAACAGGCGACCGGGCCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS CCA 72 bp CCACAGCCGGCACCACCTACGCCCAGGGCCCGGAGGTaGGGCCAACAGCGTCCAATCATCTGCAGGCAACGG +
Preference number: 6 (lower is better)
Translates to: PQPAPPTPRARR*GQQRPIICRQR
Trigger: CCGTTGCCTGCAGATGATTGGACGCTGTTGGCCCCACCTCCGGGCCCTGGGCGTAGGTGGTGCCGGCTGTGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS CAA 90 bp CCCAGGCGCGCGCTCTCCTGTCTTGCAGTTTCTAGCTCTGCTGCCTaGCGCTCCAGCTCCGCCTGTAGCCGACCCACCTGGCCCGCGATC +
Preference number: 6 (lower is better)
Translates to: PRRALSCLAVSSSAA*RSSSACSRPTWPAI
Trigger: GATCGCGGGCCAGGTGGGTCGGCTACAGGCGGAGCTGGAGCGCAAGGCAGCAGAGCTAGAAACTGCAAGACAGGAGAGCGCGCGCCTGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS CAA 72 bp GAACTACGAGGGGCCTGGGACCGCTCTGAACCACCGTaGGTAGCCTGGGCCCGTGAACCCAAGCCCCCAGGG +
Preference number: 6 (lower is better)
Translates to: ELRGAWDRSEPP*VAWAREPKPPG
Trigger: CCCTGGGGGCTTGGGTTCACGGGCCCAGGCTACCAACGGTGGTTCAGAGCGGTCCCAGGCCCCTCGTAGTTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS CAA 90 bp CTTAGGCCTGAACTACGAGGGGCCTGGGACCGCTCTGAACCACCGTaGGTAGCCTGGGCCCGTGAACCCAAGCCCCCAGGGCCACTGTCC +
Preference number: 6 (lower is better)
Translates to: LRPELRGAWDRSEPP*VAWAREPKPPGPLS
Trigger: GGACAGTGGCCCTGGGGGCTTGGGTTCACGGGCCCAGGCTACCAACGGTGGTTCAGAGCGGTCCCAGGCCCCTCGTAGTTCAGGCCTAAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS GCA 72 bp GCACTGGGTGTGCTGCCACAGCTGCTGCTGATGACCTaGAACTGGCGCTCGGCCCTGTCTGCACGCTCCAGG +
Preference number: 6 (lower is better)
Translates to: ALGVLPQLLLMT*NWRSALSARSR
Trigger: CCTGGAGCGTGCAGACAGGGCCGAGCGCCAGTTGCAGGTCATCAGCAGCAGCTGTGGCAGCACACCCAGTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS GCA 72 bp TGGCGCCACCTGGAGGGAGACAATGTCTCTGCAGCCTaGACCCAGGGCCCAGATCACCTCATGGCCGACGGG +
Preference number: 6 (lower is better)
Translates to: WRHLEGDNVSAA*TQGPDHLMADG
Trigger: CCCGTCGGCCATGAGGTGATCTGGGCCCTGGGTGCAGGCTGCAGAGACATTGTCTCCCTCCAGGTGGCGCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS GCA 72 bp AGGGCCCGGAGGTGGGGCCAACAGCGTCCAATCATCTaGAGGCAACGGTTGCTGAACCGGGTGGGCTGCTGG +
Preference number: 6 (lower is better)
Translates to: RARRWGQQRPII*RQRLLNRVGCW
Trigger: CCAGCAGCCCACCCGGTTCAGCAACCGTTGCCTGCAGATGATTGGACGCTGTTGGCCCCACCTCCGGGCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS TCA 72 bp CCGGCAGACCTCAGCCGCCACCTCCTGGGTAATCTCTaGCACGTGGTCCAGCTCCAGGACCTGCAGCCGCAT +
Preference number: 6 (lower is better)
Translates to: PADLSRHLLGNL*HVVQLQDLQPH
Trigger: ATGCGGCTGCAGGTCCTGGAGCTGGACCACGTGTCAGAGATTACCCAGGAGGTGGCGGCTGAGGTCTGCCGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS GCA 72 bp CTGTCTGCACGCTCCAGGAGCTCCTCGATGAACTGTTaGAGCCGCAGCTTGGCACTGGCCTCCCGAGCTGCC +
Preference number: 6 (lower is better)
Translates to: LSARSRSSSMNC*SRSLALASRAA
Trigger: GGCAGCTCGGGAGGCCAGTGCCAAGCTGCGGCTGCAACAGTTCATCGAGGAGCTCCTGGAGCGTGCAGACAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS CCA 72 bp GCACTGGCCTCCCGAGCTGCCGTCTCCTTCAGGAACTaGTCGATCTGCACCACCTCCTGCTGCTTGCGGCTC +
Preference number: 6 (lower is better)
Translates to: ALASRAAVSFRN*SICTTSCCLRL
Trigger: GAGCCGCAAGCAGCAGGAGGTGGTGCAGATCGACCAGTTCCTGAAGGAGACGGCAGCTCGGGAGGCCAGTGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS CAA 90 bp CCTCCAGCTCCTCCTTCTCGCGTCCCAGGCGCGCGCTCTCCTGTCTaGCAGTTTCTAGCTCTGCTGCCTTGCGCTCCAGCTCCGCCTGTA +
Preference number: 6 (lower is better)
Translates to: PPAPPSRVPGARSPV*QFLALLPCAPAPPV
Trigger: TACAGGCGGAGCTGGAGCGCAAGGCAGCAGAGCTAGAAACTGCAAGACAGGAGAGCGCGCGCCTGGGACGCGAGAAGGAGGAGCTGGAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS TCA 72 bp CCGGGGCAGCTCCAGACTGTCACTGTCATAGCAGCCTaGGCTCTGGGATGCAGCTGGCACACGACTGGAGGC +
Preference number: 6 (lower is better)
Translates to: PGQLQTVTVIAA*ALGCSWHTTGG
Trigger: GCCTCCAGTCGTGTGCCAGCTGCATCCCAGAGCTCAGGCTGCTATGACAGTGACAGTCTGGAGCTGCCCCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS TCA 72 bp ACATCCGAAACGTCACCCTCCTCCCCCTCGGTGCTGTaGCGACGAGGTCGGCGTTGCCAGTTCTGGATGGCC +
Preference number: 6 (lower is better)
Translates to: TSETSPSSPSVL*RRGRRCQFWMA
Trigger: GGCCATCCAGAACTGGCAACGCCGACCTCGTCGTCACAGCACCGAGGGGGAGGAGGGTGACGTTTCGGATGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS TCA 72 bp GCCAACAGCGTCCAATCATCTGCAGGCAACGGTTGCTaGACCGGGTGGGCTGCTGGCAGGGGTGAAGTGGCG +
Preference number: 6 (lower is better)
Translates to: ANSVQSSAGNGC*TGWAAGRGEVA
Trigger: CGCCACTTCACCCCTGCCAGCAGCCCACCCGGTTCAGCAACCGTTGCCTGCAGATGATTGGACGCTGTTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS GCA 72 bp CTGTTGCAGCCGCAGCTTGGCACTGGCCTCCCGAGCTaGCGTCTCCTTCAGGAACTGGTCGATCTGCACCAC +
Preference number: 6 (lower is better)
Translates to: LLQPQLGTGLPS*RLLQELVDLHH
Trigger: GTGGTGCAGATCGACCAGTTCCTGAAGGAGACGGCAGCTCGGGAGGCCAGTGCCAAGCTGCGGCTGCAACAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS GCA 72 bp AGCCCACATCCGAAACGTCACCCTCCTCCCCCTCGGTaGTGTGACGACGAGGTCGGCGTTGCCAGTTCTGGA +
Preference number: 6 (lower is better)
Translates to: SPHPKRHPPPPR*CDDEVGVASSG
Trigger: TCCAGAACTGGCAACGCCGACCTCGTCGTCACAGCACCGAGGGGGAGGAGGGTGACGTTTCGGATGTGGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS CCA 72 bp CGGCTGCAGCGGCGGCCGCGCCGTCGCAGATGCTGTTaGTCTTGGAAAGGATGTAGAGCGTCTCGTAGGTGT +
Preference number: 6 (lower is better)
Translates to: RLQRRPRRRRCC*SWKGCRASRRC
Trigger: ACACCTACGAGACGCTCTACATCCTTTCCAAGACCAACAGCATCTGCGACGGCGCGGCCGCCGCTGCAGCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS CCA 72 bp ATGGCCTGTCGTCTTAGGCCTGAACTACGAGGGGCCTaGGACCGCTCTGAACCACCGTTGGTAGCCTGGGCC +
Preference number: 6 (lower is better)
Translates to: MACRLRPELRGA*DRSEPPLVAWA
Trigger: GGCCCAGGCTACCAACGGTGGTTCAGAGCGGTCCCAGGCCCCTCGTAGTTCAGGCCTAAGACGACAGGCCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS CAA 72 bp GGTGGCGGCGTCGAGCAGGCAGAGGATGCCACGGACTaGCGCGCAAACAGCTCGCCGAGTGGGATTTCGATT +
Preference number: 6 (lower is better)
Translates to: GGGVEQAEDATD*RANSSPSGISI
Trigger: AATCGAAATCCCACTCGGCGAGCTGTTTGCGCGCAAGTCCGTGGCATCCTCTGCCTGCTCGACGCCGCCACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS CAA 72 bp CCTCCTTCTCGCGTCCCAGGCGCGCGCTCTCCTGTCTaGCAGTTTCTAGCTCTGCTGCCTTGCGCTCCAGCT +
Preference number: 6 (lower is better)
Translates to: PPSRVPGARSPV*QFLALLPCAPA
Trigger: AGCTGGAGCGCAAGGCAGCAGAGCTAGAAACTGCAAGACAGGAGAGCGCGCGCCTGGGACGCGAGAAGGAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS CAA 72 bp TCCAGGAGCTCCTCGATGAACTGTTGCAGCCGCAGCTaGGCACTGGCCTCCCGAGCTGCCGTCTCCTTCAGG +
Preference number: 6 (lower is better)
Translates to: SRSSSMNCCSRS*ALASRAAVSFR
Trigger: CCTGAAGGAGACGGCAGCTCGGGAGGCCAGTGCCAAGCTGCGGCTGCAACAGTTCATCGAGGAGCTCCTGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS CAA 90 bp TCTGCACGCTCCAGGAGCTCCTCGATGAACTGTTGCAGCCGCAGCTaGGCACTGGCCTCCCGAGCTGCCGTCTCCTTCAGGAACTGGTCG +
Preference number: 6 (lower is better)
Translates to: SARSRSSSMNCCSRS*ALASRAAVSFRNWS
Trigger: CGACCAGTTCCTGAAGGAGACGGCAGCTCGGGAGGCCAGTGCCAAGCTGCGGCTGCAACAGTTCATCGAGGAGCTCCTGGAGCGTGCAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS CAA 90 bp CCCCTGTGCTGGGAGAGGAGCCATGCCGTGATACGGCGTATGTGCTaGGCACAGCTGAGCCTGCATGATGTTCTCGCATTCTGCCGGGGC +
Preference number: 6 (lower is better)
Translates to: PLCWERSHAVIRRMC*AQLSLHDVLAFCRG
Trigger: GCCCCGGCAGAATGCGAGAACATCATGCAGGCTCAGCTGTGCCAAGCACATACGCCGTATCACGGCATGGCTCCTCTCCCAGCACAGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS CAA 90 bp AAGAGGGCAGCTCGCATCTTGAGGATTTCTGGGCTGATGACCTCATaGGAGCGTGAGGGGCTACCTCTCTCCACCCGACGGCCTCGCCCG +
Preference number: 6 (lower is better)
Translates to: KRAARILRISGLMTS*EREGLPLSTRRPRP
Trigger: CGGGCGAGGCCGTCGGGTGGAGAGAGGTAGCCCCTCACGCTCCAATGAGGTCATCAGCCCAGAAATCCTCAAGATGCGAGCTGCCCTCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS TCA 72 bp CTTGAGGATTTCTGGGCTGATGACCTCATTGGAGCGTaGGGGGCTACCTCTCTCCACCCGACGGCCTCGCCC +
Preference number: 6 (lower is better)
Translates to: LEDFWADDLIGA*GATSLHPTASP
Trigger: GGGCGAGGCCGTCGGGTGGAGAGAGGTAGCCCCTCACGCTCCAATGAGGTCATCAGCCCAGAAATCCTCAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS GCA 72 bp GTGGCGGCGTCGAGCAGGCAGAGGATGCCACGGACTTaGGCGCAAACAGCTCGCCGAGTGGGATTTCGATTT +
Preference number: 6 (lower is better)
Translates to: VAASSRQRMPRT*AQTARRVGFRF
Trigger: AAATCGAAATCCCACTCGGCGAGCTGTTTGCGCGCAAGTCCGTGGCATCCTCTGCCTGCTCGACGCCGCCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS GCA 72 bp GCTGCTGATGACCTGCAACTGGCGCTCGGCCCTGTCTaGACGCTCCAGGAGCTCCTCGATGAACTGTTGCAG +
Preference number: 6 (lower is better)
Translates to: AADDLQLALGPV*TLQELLDELLQ
Trigger: CTGCAACAGTTCATCGAGGAGCTCCTGGAGCGTGCAGACAGGGCCGAGCGCCAGTTGCAGGTCATCAGCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS GCA 72 bp ATGGCGGGCCACAAAGCGCCAGTCCCGACAGACCTCTaGTGCATGGAGCAGTGTCCGGGTATCCAGGTAGGT +
Preference number: 6 (lower is better)
Translates to: MAGHKAPVPTDL*CMEQCPGIQVG
Trigger: ACCTACCTGGATACCCGGACACTGCTCCATGCAGCAGAGGTCTGTCGGGACTGGCGCTTTGTGGCCCGCCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS CCA 72 bp CAGCGGCGGCCGCGCCGTCGCAGATGCTGTTGGTCTTaGAAAGGATGTAGAGCGTCTCGTAGGTGTGGCTGT +
Preference number: 6 (lower is better)
Translates to: QRRPRRRRCCWS*KGCRASRRCGC
Trigger: ACAGCCACACCTACGAGACGCTCTACATCCTTTCCAAGACCAACAGCATCTGCGACGGCGCGGCCGCCGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS CCA 72 bp TTGAGTGAAGCCAGCAGTTCCACGCTCACGTCCACTTaGCGTGAGAGCTCAGAGGCGCGCTCCTCCAGCTCC +
Preference number: 6 (lower is better)
Translates to: LSEASSSTLTST*RESSEARSSSS
Trigger: GGAGCTGGAGGAGCGCGCCTCTGAGCTCTCACGCCAAGTGGACGTGAGCGTGGAACTGCTGGCTTCACTCAA
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS CCA 72 bp TGCTGTGACGACGAGGTCGGCGTTGCCAGTTCTGGATaGCCTGTCGTCTTAGGCCTGAACTACGAGGGGCCT +
Preference number: 6 (lower is better)
Translates to: CCDDEVGVASSG*PVVLGLNYEGP
Trigger: AGGCCCCTCGTAGTTCAGGCCTAAGACGACAGGCCATCCAGAACTGGCAACGCCGACCTCGTCGTCACAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS CCA 72 bp GCATTCTCAAGTAGCACTCTCGTCCAGACAGCGGGATaGCGGGCCACAAAGCGCCAGTCCCGACAGACCTCT +
Preference number: 6 (lower is better)
Translates to: AFSSSTLVQTAG*RATKRQSRQTS
Trigger: AGAGGTCTGTCGGGACTGGCGCTTTGTGGCCCGCCATCCCGCTGTCTGGACGAGAGTGCTACTTGAGAATGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS CAA 72 bp TCGAGAAGCCAGGCCTCCGACGCAGGGCCTGGAGTTTaGTCACCATGTCCTCAAACAGCTTCTGGGCCTCGG +
Preference number: 6 (lower is better)
Translates to: SRSQASDAGPGV*SPCPQTASGPR
Trigger: CCGAGGCCCAGAAGCTGTTTGAGGACATGGTGACAAAACTCCAGGCCCTGCGTCGGAGGCCTGGCTTCTCGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS CAA 90 bp GCAGAATCTTCGAGAAGCCAGGCCTCCGACGCAGGGCCTGGAGTTTaGTCACCATGTCCTCAAACAGCTTCTGGGCCTCGGGACTGCTGG +
Preference number: 6 (lower is better)
Translates to: AESSRSQASDAGPGV*SPCPQTASGPRDCW
Trigger: CCAGCAGTCCCGAGGCCCAGAAGCTGTTTGAGGACATGGTGACAAAACTCCAGGCCCTGCGTCGGAGGCCTGGCTTCTCGAAGATTCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS CCA 72 bp ACCTCAGCCGCCACCTCCTGGGTAATCTCTGACACGTaGTCCAGCTCCAGGACCTGCAGCCGCATACAGTTT +
Preference number: 6 (lower is better)
Translates to: TSAATSWVISDT*SSSRTCSRIQF
Trigger: AAACTGTATGCGGCTGCAGGTCCTGGAGCTGGACCACGTGTCAGAGATTACCCAGGAGGTGGCGGCTGAGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS CAA 90 bp TGCTGCTTGCGGCTCAGCTCCTGTTCCTTATGCACCAGGTCCTGCTaGAGTGAAGCCAGCAGTTCCACGCTCACGTCCACTTGGCGTGAG +
Preference number: 6 (lower is better)
Translates to: CCLRLSSCSLCTRSC*SEASSSTLTSTWRE
Trigger: CTCACGCCAAGTGGACGTGAGCGTGGAACTGCTGGCTTCACTCAAGCAGGACCTGGTGCATAAGGAACAGGAGCTGAGCCGCAAGCAGCA
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS TCA 72 bp CAGCTCCTGTTCCTTATGCACCAGGTCCTGCTTGAGTaGAGCCAGCAGTTCCACGCTCACGTCCACTTGGCG +
Preference number: 6 (lower is better)
Translates to: QLLFLMHQVLLE*SQQFHAHVHLA
Trigger: CGCCAAGTGGACGTGAGCGTGGAACTGCTGGCTTCACTCAAGCAGGACCTGGTGCATAAGGAACAGGAGCTG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS GCA 72 bp TTGCGGCTCAGCTCCTGTTCCTTATGCACCAGGTCCTaGTTGAGTGAAGCCAGCAGTTCCACGCTCACGTCC +
Preference number: 6 (lower is better)
Translates to: LRLSSCSLCTRS*LSEASSSTLTS
Trigger: GGACGTGAGCGTGGAACTGCTGGCTTCACTCAAGCAGGACCTGGTGCATAAGGAACAGGAGCTGAGCCGCAA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS GCA 72 bp ACCTCCTGCTGCTTGCGGCTCAGCTCCTGTTCCTTATaGACCAGGTCCTGCTTGAGTGAAGCCAGCAGTTCC +
Preference number: 6 (lower is better)
Translates to: TSCCLRLSSCSL*TRSCLSEASSS
Trigger: GGAACTGCTGGCTTCACTCAAGCAGGACCTGGTGCATAAGGAACAGGAGCTGAGCCGCAAGCAGCAGGAGGT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS GCA 72 bp TGCTGGGAGAGGAGCCATGCCGTGATACGGCGTATGTaGTTGGCACAGCTGAGCCTGCATGATGTTCTCGCA +
Preference number: 6 (lower is better)
Translates to: CWERSHAVIRRM*LAQLSLHDVLA
Trigger: TGCGAGAACATCATGCAGGCTCAGCTGTGCCAAGCACATACGCCGTATCACGGCATGGCTCCTCTCCCAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS TCA 72 bp GGCTCAGCTCCTGTTCCTTATGCACCAGGTCCTGCTTaGGTGAAGCCAGCAGTTCCACGCTCACGTCCACTT +
Preference number: 6 (lower is better)
Translates to: GSAPVPYAPGPA*VKPAVPRSRPL
Trigger: AAGTGGACGTGAGCGTGGAACTGCTGGCTTCACTCAAGCAGGACCTGGTGCATAAGGAACAGGAGCTGAGCC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS CAA 72 bp TGGGAGAGGAGCCATGCCGTGATACGGCGTATGTGCTaGGCACAGCTGAGCCTGCATGATGTTCTCGCATTC +
Preference number: 6 (lower is better)
Translates to: WERSHAVIRRMC*AQLSLHDVLAF
Trigger: GAATGCGAGAACATCATGCAGGCTCAGCTGTGCCAAGCACATACGCCGTATCACGGCATGGCTCCTCTCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS GCA 72 bp TGGGTAATCTCTGACACGTGGTCCAGCTCCAGGACCTaGAGCCGCATACAGTTTCTTGCAAGTGATGCCAGG +
Preference number: 6 (lower is better)
Translates to: WVISDTWSSSRT*SRIQFLASDAR
Trigger: CCTGGCATCACTTGCAAGAAACTGTATGCGGCTGCAGGTCCTGGAGCTGGACCACGTGTCAGAGATTACCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS CCA 72 bp AGAATCTTCGAGAAGCCAGGCCTCCGACGCAGGGCCTaGAGTTTTGTCACCATGTCCTCAAACAGCTTCTGG +
Preference number: 6 (lower is better)
Translates to: RIFEKPGLRRRA*SFVTMSSNSFW
Trigger: CCAGAAGCTGTTTGAGGACATGGTGACAAAACTCCAGGCCCTGCGTCGGAGGCCTGGCTTCTCGAAGATTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS GCA 72 bp GCTTCAGGTTCTGTAATGTTAACGAGTGAGCCTGGGTaGACCACTGAGCCAACATCGCCAGGAACTTGGAAC +
Preference number: 6 (lower is better)
Translates to: ASGSVMLTSEPG*TTEPTSPGTWN
Trigger: GTTCCAAGTTCCTGGCGATGTTGGCTCAGTGGTGCACCCAGGCTCACTCGTTAACATTACAGAACCTGAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2
CDS GCA 72 bp CTGGGCCTCGGGACTGCTGGGCTCTTTGAAGTAATCTaGAATCCCAATCTGCACCACAATGGATTTAAGGTT +
Preference number: 6 (lower is better)
Translates to: LGLGTAGLFEVI*NPNLHHNGFKV
Trigger: AACCTTAAATCCATTGTGGTGCAGATTGGGATTGCAGATTACTTCAAAGAGCCCAGCAGTCCCGAGGCCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159062.8
ENSMUST00000161078.8
ENSMUST00000161546.2