Pregenerated sensors for FBXO38 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000042211Ensembl transcript IDs: ENSMUST00000048688.8, ENSMUST00000235807.2
Found 188 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR TCA 90 bp | AGGGCCTCCCAATTCCAAGCCCAAGGTTCCTGTGTAGAGACTCTTGGCTGCTCTGGCCTCAGAGTCCTCTaGCCCACCAGGGGAGCAGAC | + |
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Preference number: 4 (lower is better) Translates to: RASQFQAQGSCVETLGCSGLRVL*PTRGAD Trigger: GTCTGCTCCCCTGGTGGGTCAGAGGACTCTGAGGCC...AGAGCAGCCAAGAGTCTCTACACAGGAACCTTGGGCTTGGAATTGGGAGGCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048688.8 |
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| CDS-3UTR GCA 90 bp | AACAAACTGAGCCAGGGCCTCCCAATTCCAAGCCCAAGGTTCCTGTGTAGAGACTGCTGGCGGCTGTGCTaGTGCTGCTGCTGCTGCAGC | + |
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Preference number: 4 (lower is better) Translates to: NKLSQGLPIPSPRFLCRDCWRLC*CCCCCS Trigger: GCTGCAGCAGCAGCAGCAGCAGCACAGCCGCCAGCA...GTCTCTACACAGGAACCTTGGGCTTGGAATTGGGAGGCCCTGGCTCAGTTTGTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048688.8 |
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| CDS-3UTR TCA 90 bp | CTGAGCCAGGGCCTCCCAATTCCAAGCCCAAGGTTCCTGTGTAGAGACTCTTGGACAGGCTCGGCTGGTTaGAGGACGCTCCTCATCAGA | + |
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Preference number: 4 (lower is better) Translates to: LSQGLPIPSPRFLCRDSWTGSAG*RTLLIR Trigger: TCTGATGAGGAGCGTCCTTCAACCAGCCGAGCCTGT...CCAAGAGTCTCTACACAGGAACCTTGGGCTTGGAATTGGGAGGCCCTGGCTCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048688.8 |
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| CDS-3UTR GCA 90 bp | AGGGCCTCCCAATTCCAAGCCCAAGGTTCCTGTGTAGAGACTCTTGGCTGCTCTGGCTCTGGGAAGCAGTaGTGGGTGAGCTGGCGTTTC | + |
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Preference number: 4 (lower is better) Translates to: RASQFQAQGSCVETLGCSGSGKQ*WVSWRF Trigger: GAAACGCCAGCTCACCCAGCACTGCTTCCCAGAGCC...AGAGCAGCCAAGAGTCTCTACACAGGAACCTTGGGCTTGGAATTGGGAGGCCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048688.8 |
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| CDS-3UTR GCA 90 bp | AGGGCCTCCCAATTCCAAGCCCAAGGTTCCTGTGTAGAGACTCTTGGCTGCTCTGCTCGGAAGAGCCGCTaGTGGTCACCGTCCTTGCAA | + |
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Preference number: 4 (lower is better) Translates to: RASQFQAQGSCVETLGCSARKSR*WSPSLQ Trigger: TTGCAAGGACGGTGACCAGCAGCGGCTCTTCCGAGC...AGAGCAGCCAAGAGTCTCTACACAGGAACCTTGGGCTTGGAATTGGGAGGCCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048688.8 |
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| CDS-3UTR CCA 90 bp | AACAAACTGAGCCAGGGCCTCCCAATTCCAAGCCCAAGGTTCCTGTGTAGAGACGTCTGCTCCTGGCCCTaGTTAGGGGCCTCCGAGGAT | + |
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Preference number: 4 (lower is better) Translates to: NKLSQGLPIPSPRFLCRDVCSWP*LGASED Trigger: ATCCTCGGAGGCCCCTAACCAGGGCCAGGAGCAGAC...GTCTCTACACAGGAACCTTGGGCTTGGAATTGGGAGGCCCTGGCTCAGTTTGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048688.8 |
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| CDS-3UTR CCA 90 bp | CTGAGCCAGGGCCTCCCAATTCCAAGCCCAAGGTTCCTGTGTAGAGACTCTTGGCAACACAGGCTCGGCTaGTTGAAGGACGCTCCTCAT | + |
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Preference number: 4 (lower is better) Translates to: LSQGLPIPSPRFLCRDSWQHRLG*LKDAPH Trigger: ATGAGGAGCGTCCTTCAACCAGCCGAGCCTGTGTTG...CCAAGAGTCTCTACACAGGAACCTTGGGCTTGGAATTGGGAGGCCCTGGCTCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048688.8 |
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| CDS-3UTR CCA 90 bp | GGCAATAGGCTCAGTCGCCTGACACTGAGAACTAAGTCAGGAAAAGAACACGACGGGACAGTCTGCTCCTaGCCCTGGTTAGGGGCCTCC | + |
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Preference number: 4 (lower is better) Translates to: GNRLSRLTLRTKSGKEHDGTVCS*PWLGAS Trigger: GGAGGCCCCTAACCAGGGCCAGGAGCAGACTGTCCC...GTCGTGTTCTTTTCCTGACTTAGTTCTCAGTGTCAGGCGACTGAGCCTATTGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048688.8 |
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| CDS-3UTR TCA 90 bp | AGGGCCTCCCAATTCCAAGCCCAAGGTTCCTGTGTAGAGACTCTTGGCTGCTCTCAACCACGTGTTGGATaGGACCTCCCAGGAAAGGGA | + |
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Preference number: 4 (lower is better) Translates to: RASQFQAQGSCVETLGCSQPRVG*DLPGKG Trigger: TCCCTTTCCTGGGAGGTCTCATCCAACACGTGGTTG...AGAGCAGCCAAGAGTCTCTACACAGGAACCTTGGGCTTGGAATTGGGAGGCCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048688.8 |
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| CDS-3UTR TCA 90 bp | GGCAATAGGCTCAGTCGCCTGACACTGAGAACTAAGTCAGGAAAAGAACACGACGGAAGCAGTGCTGGGTaGGCTGGCGTTTCCCGCTGT | + |
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Preference number: 4 (lower is better) Translates to: GNRLSRLTLRTKSGKEHDGSSAG*AGVSRC Trigger: ACAGCGGGAAACGCCAGCTCACCCAGCACTGCTTCC...GTCGTGTTCTTTTCCTGACTTAGTTCTCAGTGTCAGGCGACTGAGCCTATTGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048688.8 |
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| CDS-3UTR TCA 90 bp | CTGAGCCAGGGCCTCCCAATTCCAAGCCCAAGGTTCCTGTGTAGAGACTCTTGGTCGAGGTATCTAGGGTaGAGGCCATACAGCTGTTCA | + |
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Preference number: 4 (lower is better) Translates to: LSQGLPIPSPRFLCRDSWSRYLG*RPYSCS Trigger: TGAACAGCTGTATGGCCTTCACCCTAGATACCTCGA...CCAAGAGTCTCTACACAGGAACCTTGGGCTTGGAATTGGGAGGCCCTGGCTCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048688.8 |
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| CDS-3UTR TCA 90 bp | AGGGCCTCCCAATTCCAAGCCCAAGGTTCCTGTGTAGAGACTCTTGGCTGCTCTTGGAATTCTGGTTGCTaGCAAGCGCTGAGGAAACCC | + |
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Preference number: 4 (lower is better) Translates to: RASQFQAQGSCVETLGCSWNSGC*QALRKP Trigger: GGGTTTCCTCAGCGCTTGTCAGCAACCAGAATTCCA...AGAGCAGCCAAGAGTCTCTACACAGGAACCTTGGGCTTGGAATTGGGAGGCCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048688.8 |
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| CDS-3UTR GCA 90 bp | TATTTCCTATATAACAAACTGAGCCAGGGCCTCCCAATTCCAAGCCCAAGGTTCTGGCGTTTCCCGCTGTaGTGGCGGCTGTGCTGCTGC | + |
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Preference number: 4 (lower is better) Translates to: YFLYNKLSQGLPIPSPRFWRFPL*WRLCCC Trigger: GCAGCAGCACAGCCGCCAGCACAGCGGGAAACGCCA...GAACCTTGGGCTTGGAATTGGGAGGCCCTGGCTCAGTTTGTTATATAGGAAATA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048688.8 |
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| CDS-3UTR GCA 90 bp | AGGGCCTCCCAATTCCAAGCCCAAGGTTCCTGTGTAGAGACTCTTGGCTGCTCTTCGTGTCCATCCAATTaGGGATGCGCACCTTGTTCC | + |
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Preference number: 4 (lower is better) Translates to: RASQFQAQGSCVETLGCSSCPSN*GCAPCS Trigger: GGAACAAGGTGCGCATCCGCAATTGGATGGACACGA...AGAGCAGCCAAGAGTCTCTACACAGGAACCTTGGGCTTGGAATTGGGAGGCCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048688.8 |
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| CDS-3UTR CCA 90 bp | AGGGCCTCCCAATTCCAAGCCCAAGGTTCCTGTGTAGAGACTCTTGGCTGCTCTGGATACATCTACTTCTaGAGGGCTCGGCTCGGAAGA | + |
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Preference number: 4 (lower is better) Translates to: RASQFQAQGSCVETLGCSGYIYF*RARLGR Trigger: TCTTCCGAGCCGAGCCCTCCAGAAGTAGATGTATCC...AGAGCAGCCAAGAGTCTCTACACAGGAACCTTGGGCTTGGAATTGGGAGGCCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048688.8 |
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| CDS-3UTR GCA 90 bp | TTCCTGTGTAGAGACTCTTGGCTGCTCTGGGCCAGAAGAGCCAGGAAAAGTCTAAGCCTTTCTCACAGCTaGTCTCCTCCAGGGGAAACG | + |
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Preference number: 4 (lower is better) Translates to: FLCRDSWLLWARRARKSLSLSHS*SPPGET Trigger: CGTTTCCCCTGGAGGAGAGCAGCTGTGAGAAAGGCT...TAGACTTTTCCTGGCTCTTCTGGCCCAGAGCAGCCAAGAGTCTCTACACAGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048688.8 |
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| CDS-3UTR CCA 90 bp | CAAGATACAACACTCTTTAGGAGGGTGACTCAAACAGCTCTGCTGGAGAAGAAACGTTTCCCGCTGTGCTaGCGGCTGTGCTGCTGCTGC | + |
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Preference number: 4 (lower is better) Translates to: QDTTLFRRVTQTALLEKKRFPLC*RLCCCC Trigger: GCAGCAGCAGCACAGCCGCCAGCACAGCGGGAAACG...TTTCTTCTCCAGCAGAGCTGTTTGAGTCACCCTCCTAAAGAGTGTTGTATCTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048688.8 |
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| CDS-3UTR CCA 90 bp | TTCCTGTGTAGAGACTCTTGGCTGCTCTGGGCCAGAAGAGCCAGGAAAAGTCTAGATATCAGCGGTACATaGGACAGTCTGCTCCTGGCC | + |
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Preference number: 4 (lower is better) Translates to: FLCRDSWLLWARRARKSLDISGT*DSLLLA Trigger: GGCCAGGAGCAGACTGTCCCATGTACCGCTGATATC...TAGACTTTTCCTGGCTCTTCTGGCCCAGAGCAGCCAAGAGTCTCTACACAGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048688.8 |
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| CDS-3UTR TCA 90 bp | AACAAACTGAGCCAGGGCCTCCCAATTCCAAGCCCAAGGTTCCTGTGTAGAGACCATCTGGCGCATCTCTaGGATCTCCTCTCCTATTGT | + |
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Preference number: 4 (lower is better) Translates to: NKLSQGLPIPSPRFLCRDHLAHL*DLLSYC Trigger: ACAATAGGAGAGGAGATCTCAGAGATGCGCCAGATG...GTCTCTACACAGGAACCTTGGGCTTGGAATTGGGAGGCCCTGGCTCAGTTTGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048688.8 |
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| CDS-3UTR GCA 90 bp | GGCAATAGGCTCAGTCGCCTGACACTGAGAACTAAGTCAGGAAAAGAACACGACGCCTTTCCCACTTACTaGCGTTTCCCTGGACTGTCC | + |
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Preference number: 4 (lower is better) Translates to: GNRLSRLTLRTKSGKEHDAFPTY*RFPGLS Trigger: GGACAGTCCAGGGAAACGGCAGTAAGTGGGAAAGGC...GTCGTGTTCTTTTCCTGACTTAGTTCTCAGTGTCAGGCGACTGAGCCTATTGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048688.8 |
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| CDS-3UTR GCA 90 bp | AGGGCCTCCCAATTCCAAGCCCAAGGTTCCTGTGTAGAGACTCTTGGCTGCTCTCCTCATCAGAACACCTaGCAGTTCTCCTTTGAGACT | + |
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Preference number: 4 (lower is better) Translates to: RASQFQAQGSCVETLGCSPHQNT*QFSFET Trigger: AGTCTCAAAGGAGAACTGGCAGGTGTTCTGATGAGG...AGAGCAGCCAAGAGTCTCTACACAGGAACCTTGGGCTTGGAATTGGGAGGCCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048688.8 |
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| CDS-3UTR GCA 90 bp | AGGGCCTCCCAATTCCAAGCCCAAGGTTCCTGTGTAGAGACTCTTGGCTGCTCTATGTCTGCAGACAACTaGCCTTTTCTTCGAGGAGCA | + |
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Preference number: 4 (lower is better) Translates to: RASQFQAQGSCVETLGCSMSADN*PFLRGA Trigger: TGCTCCTCGAAGAAAAGGGCAGTTGTCTGCAGACAT...AGAGCAGCCAAGAGTCTCTACACAGGAACCTTGGGCTTGGAATTGGGAGGCCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048688.8 |
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| CDS-3UTR CCA 90 bp | AACAAACTGAGCCAGGGCCTCCCAATTCCAAGCCCAAGGTTCCTGTGTAGAGACTCCAGCTTCAAAGCATaGCACCGCACGAGGTTGATA | + |
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Preference number: 4 (lower is better) Translates to: NKLSQGLPIPSPRFLCRDSSFKA*HRTRLI Trigger: TATCAACCTCGTGCGGTGCCATGCTTTGAAGCTGGA...GTCTCTACACAGGAACCTTGGGCTTGGAATTGGGAGGCCCTGGCTCAGTTTGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048688.8 |
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| CDS-3UTR CCA 90 bp | AACACACAAGATACAACACTCTTTAGGAGGGTGACTCAAACAGCTCTGCTGGAGGCAAAGTCCGGGCTCTaGGAAGCAGTGCTGGGTGAG | + |
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Preference number: 4 (lower is better) Translates to: NTQDTTLFRRVTQTALLEAKSGL*EAVLGE Trigger: CTCACCCAGCACTGCTTCCCAGAGCCCGGACTTTGC...CTCCAGCAGAGCTGTTTGAGTCACCCTCCTAAAGAGTGTTGTATCTTGTGTGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048688.8 |
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| CDS-3UTR CCA 90 bp | GGCAATAGGCTCAGTCGCCTGACACTGAGAACTAAGTCAGGAAAAGAACACGACGTCTACCTGCTGCATTaGGCGCAGGTAGATGATCCG | + |
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Preference number: 4 (lower is better) Translates to: GNRLSRLTLRTKSGKEHDVYLLH*AQVDDP Trigger: CGGATCATCTACCTGCGCCCAATGCAGCAGGTAGAC...GTCGTGTTCTTTTCCTGACTTAGTTCTCAGTGTCAGGCGACTGAGCCTATTGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048688.8 |
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| CDS-3UTR TCA 90 bp | TTCCTGTGTAGAGACTCTTGGCTGCTCTGGGCCAGAAGAGCCAGGAAAAGTCTATTCCCTGGACTGTCCTaGGTCTCCAGTCTTTTCTTC | + |
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Preference number: 4 (lower is better) Translates to: FLCRDSWLLWARRARKSLFPGLS*VSSLFF Trigger: GAAGAAAAGACTGGAGACTCAGGACAGTCCAGGGAA...TAGACTTTTCCTGGCTCTTCTGGCCCAGAGCAGCCAAGAGTCTCTACACAGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048688.8 |
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| CDS-3UTR GCA 90 bp | GGCAATAGGCTCAGTCGCCTGACACTGAGAACTAAGTCAGGAAAAGAACACGACCCCAATTCCAGTTCCTaGACTCAGACCAACTCGAGC | + |
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Preference number: 4 (lower is better) Translates to: GNRLSRLTLRTKSGKEHDPNSSS*TQTNSS Trigger: GCTCGAGTTGGTCTGAGTGCAGGAACTGGAATTGGG...GTCGTGTTCTTTTCCTGACTTAGTTCTCAGTGTCAGGCGACTGAGCCTATTGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048688.8 |
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| CDS-3UTR GCA 90 bp | CAAGATACAACACTCTTTAGGAGGGTGACTCAAACAGCTCTGCTGGAGAAGAAAGCTGGTCACCGTCCTTaGAAAGTCCGGGCTCTGGGA | + |
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Preference number: 4 (lower is better) Translates to: QDTTLFRRVTQTALLEKKAGHRP*KVRALG Trigger: TCCCAGAGCCCGGACTTTGCAAGGACGGTGACCAGC...TTTCTTCTCCAGCAGAGCTGTTTGAGTCACCCTCCTAAAGAGTGTTGTATCTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048688.8 |
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| CDS-3UTR GCA 90 bp | TATTTCCTATATAACAAACTGAGCCAGGGCCTCCCAATTCCAAGCCCAAGGTTCGTACATGGGACAGTCTaGTCCTGGCCCTGGTTAGGG | + |
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Preference number: 4 (lower is better) Translates to: YFLYNKLSQGLPIPSPRFVHGTV*SWPWLG Trigger: CCCTAACCAGGGCCAGGAGCAGACTGTCCCATGTAC...GAACCTTGGGCTTGGAATTGGGAGGCCCTGGCTCAGTTTGTTATATAGGAAATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048688.8 |
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| CDS-3UTR CCA 90 bp | AACAAACTGAGCCAGGGCCTCCCAATTCCAAGCCCAAGGTTCCTGTGTAGAGACCGCATCCACCTCGAGTaGTCTGAGATCCAATTGTAT | + |
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Preference number: 4 (lower is better) Translates to: NKLSQGLPIPSPRFLCRDRIHLE*SEIQLY Trigger: ATACAATTGGATCTCAGACCACTCGAGGTGGATGCG...GTCTCTACACAGGAACCTTGGGCTTGGAATTGGGAGGCCCTGGCTCAGTTTGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048688.8 |
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| CDS-3UTR CCA 90 bp | AACACACAAGATACAACACTCTTTAGGAGGGTGACTCAAACAGCTCTGCTGGAGCTCGAGCACAGCCCTTaGGTGGCTCACGGAACATCT | + |
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Preference number: 4 (lower is better) Translates to: NTQDTTLFRRVTQTALLELEHSP*VAHGTS Trigger: AGATGTTCCGTGAGCCACCCAAGGGCTGTGCTCGAG...CTCCAGCAGAGCTGTTTGAGTCACCCTCCTAAAGAGTGTTGTATCTTGTGTGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048688.8 |
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| CDS-3UTR CCA 90 bp | CAAGATACAACACTCTTTAGGAGGGTGACTCAAACAGCTCTGCTGGAGAAGAAATCTGGGAAGCAGTGCTaGGTGAGCTGGCGTTTCCCG | + |
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Preference number: 4 (lower is better) Translates to: QDTTLFRRVTQTALLEKKSGKQC*VSWRFP Trigger: CGGGAAACGCCAGCTCACCCAGCACTGCTTCCCAGA...TTTCTTCTCCAGCAGAGCTGTTTGAGTCACCCTCCTAAAGAGTGTTGTATCTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048688.8 |
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| CDS-3UTR CCA 90 bp | TATTTCCTATATAACAAACTGAGCCAGGGCCTCCCAATTCCAAGCCCAAGGTTCCGGAAGAGCCGCTGCTaGTCACCGTCCTTGCAAAGT | + |
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Preference number: 4 (lower is better) Translates to: YFLYNKLSQGLPIPSPRFRKSRC*SPSLQS Trigger: ACTTTGCAAGGACGGTGACCAGCAGCGGCTCTTCCG...GAACCTTGGGCTTGGAATTGGGAGGCCCTGGCTCAGTTTGTTATATAGGAAATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048688.8 |
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| CDS-3UTR CCA 90 bp | AACAAACTGAGCCAGGGCCTCCCAATTCCAAGCCCAAGGTTCCTGTGTAGAGACAGCAGACACACTGCCTaGATACATCTACTTCTGGAG | + |
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Preference number: 4 (lower is better) Translates to: NKLSQGLPIPSPRFLCRDSRHTA*IHLLLE Trigger: CTCCAGAAGTAGATGTATCCAGGCAGTGTGTCTGCT...GTCTCTACACAGGAACCTTGGGCTTGGAATTGGGAGGCCCTGGCTCAGTTTGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048688.8 |
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| CDS-3UTR CCA 90 bp | CTGAGCCAGGGCCTCCCAATTCCAAGCCCAAGGTTCCTGTGTAGAGACTCTTGGTTCGAGGAGCATAGATaGTGCTCTCTTCATCATCTT | + |
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Preference number: 4 (lower is better) Translates to: LSQGLPIPSPRFLCRDSWFEEHR*CSLHHL Trigger: AAGATGATGAAGAGAGCACCATCTATGCTCCTCGAA...CCAAGAGTCTCTACACAGGAACCTTGGGCTTGGAATTGGGAGGCCCTGGCTCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048688.8 |
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| CDS-3UTR TCA 90 bp | TTCCTGTGTAGAGACTCTTGGCTGCTCTGGGCCAGAAGAGCCAGGAAAAGTCTAACAGAGCACTTCATGTaGCAGCTGGTTCATGTAGTC | + |
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Preference number: 4 (lower is better) Translates to: FLCRDSWLLWARRARKSLTEHFM*QLVHVV Trigger: GACTACATGAACCAGCTGTCACATGAAGTGCTCTGT...TAGACTTTTCCTGGCTCTTCTGGCCCAGAGCAGCCAAGAGTCTCTACACAGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048688.8 |
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| CDS-3UTR TCA 90 bp | AACAAACTGAGCCAGGGCCTCCCAATTCCAAGCCCAAGGTTCCTGTGTAGAGACTCTACCAACTCCAAATaGGATGTTTCTACACCCACC | + |
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Preference number: 4 (lower is better) Translates to: NKLSQGLPIPSPRFLCRDSTNSK*DVSTPT Trigger: GGTGGGTGTAGAAACATCTCATTTGGAGTTGGTAGA...GTCTCTACACAGGAACCTTGGGCTTGGAATTGGGAGGCCCTGGCTCAGTTTGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048688.8 |
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| CDS-3UTR TCA 90 bp | TATTTCCTATATAACAAACTGAGCCAGGGCCTCCCAATTCCAAGCCCAAGGTTCTGCTCACTGGTCACCTaGCAGCCTTTCTCACAGCTG | + |
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Preference number: 4 (lower is better) Translates to: YFLYNKLSQGLPIPSPRFCSLVT*QPFSQL Trigger: CAGCTGTGAGAAAGGCTGTCAGGTGACCAGTGAGCA...GAACCTTGGGCTTGGAATTGGGAGGCCCTGGCTCAGTTTGTTATATAGGAAATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048688.8 |
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| CDS-3UTR TCA 90 bp | TTCCTGTGTAGAGACTCTTGGCTGCTCTGGGCCAGAAGAGCCAGGAAAAGTCTACTTTCATATCGGCTTTaGTCTGCTCACTGGTCACCT | + |
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Preference number: 4 (lower is better) Translates to: FLCRDSWLLWARRARKSLLSYRL*SAHWSP Trigger: AGGTGACCAGTGAGCAGATCAAAGCCGATATGAAAG...TAGACTTTTCCTGGCTCTTCTGGCCCAGAGCAGCCAAGAGTCTCTACACAGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048688.8 |
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| CDS-3UTR TCA 90 bp | CAAGATACAACACTCTTTAGGAGGGTGACTCAAACAGCTCTGCTGGAGAAGAAACTGCCAGTTCTCCTTTaGGACTCCTGGGGCCTGAGA | + |
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Preference number: 4 (lower is better) Translates to: QDTTLFRRVTQTALLEKKLPVLL*DSWGLR Trigger: TCTCAGGCCCCAGGAGTCTCAAAGGAGAACTGGCAG...TTTCTTCTCCAGCAGAGCTGTTTGAGTCACCCTCCTAAAGAGTGTTGTATCTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048688.8 |
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| CDS-3UTR TCA 90 bp | AACAAACTGAGCCAGGGCCTCCCAATTCCAAGCCCAAGGTTCCTGTGTAGAGACTGTTTTGGCAACTTCTaGCTCAGATATCAGCGGTAC | + |
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Preference number: 4 (lower is better) Translates to: NKLSQGLPIPSPRFLCRDCFGNF*LRYQRY Trigger: GTACCGCTGATATCTGAGTCAGAAGTTGCCAAAACA...GTCTCTACACAGGAACCTTGGGCTTGGAATTGGGAGGCCCTGGCTCAGTTTGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048688.8 |
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| CDS-3UTR GCA 90 bp | CTGAGCCAGGGCCTCCCAATTCCAAGCCCAAGGTTCCTGTGTAGAGACTCTTGGTTAAAGAAGGCTGGATaGGAACTTCATGTAACCTTC | + |
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Preference number: 4 (lower is better) Translates to: LSQGLPIPSPRFLCRDSWLKKAG*ELHVTF Trigger: GAAGGTTACATGAAGTTCGCATCCAGCCTTCTTTAA...CCAAGAGTCTCTACACAGGAACCTTGGGCTTGGAATTGGGAGGCCCTGGCTCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048688.8 |
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| CDS-3UTR GCA 90 bp | GGCAATAGGCTCAGTCGCCTGACACTGAGAACTAAGTCAGGAAAAGAACACGACTCTGGTGGGAGTTGTTaGACCTCTTTCGAAGTGGAG | + |
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Preference number: 4 (lower is better) Translates to: GNRLSRLTLRTKSGKEHDSGGSC*TSFEVE Trigger: CTCCACTTCGAAAGAGGTGCAACAACTCCCACCAGA...GTCGTGTTCTTTTCCTGACTTAGTTCTCAGTGTCAGGCGACTGAGCCTATTGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048688.8 |
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| CDS-3UTR GCA 90 bp | TATTTCCTATATAACAAACTGAGCCAGGGCCTCCCAATTCCAAGCCCAAGGTTCTGCTGCTGCTGCTGCTaGTGCAGCTGGGATAGACAT | + |
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Preference number: 4 (lower is better) Translates to: YFLYNKLSQGLPIPSPRFCCCCC*CSWDRH Trigger: ATGTCTATCCCAGCTGCAGCAGCAGCAGCAGCAGCA...GAACCTTGGGCTTGGAATTGGGAGGCCCTGGCTCAGTTTGTTATATAGGAAATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048688.8 |
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| CDS-3UTR CCA 90 bp | CTGAGCCAGGGCCTCCCAATTCCAAGCCCAAGGTTCCTGTGTAGAGACTCTTGGTTGGTTAAAGAAGGCTaGATGCGAACTTCATGTAAC | + |
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Preference number: 4 (lower is better) Translates to: LSQGLPIPSPRFLCRDSWLVKEG*MRTSCN Trigger: GTTACATGAAGTTCGCATCCAGCCTTCTTTAACCAA...CCAAGAGTCTCTACACAGGAACCTTGGGCTTGGAATTGGGAGGCCCTGGCTCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048688.8 |
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| CDS-3UTR CCA 90 bp | AGGGCCTCCCAATTCCAAGCCCAAGGTTCCTGTGTAGAGACTCTTGGCTGCTCTGTCATCCGAATCATCTaGGTGATGGTGATTGTTATC | + |
|
Preference number: 4 (lower is better) Translates to: RASQFQAQGSCVETLGCSVIRII*VMVIVI Trigger: GATAACAATCACCATCACCCAGATGATTCGGATGAC...AGAGCAGCCAAGAGTCTCTACACAGGAACCTTGGGCTTGGAATTGGGAGGCCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048688.8 |
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| CDS-3UTR CCA 90 bp | AACAAACTGAGCCAGGGCCTCCCAATTCCAAGCCCAAGGTTCCTGTGTAGAGACAGTTCTCCATCTTCCTaGACCATGTCTTCCATCTCA | + |
|
Preference number: 4 (lower is better) Translates to: NKLSQGLPIPSPRFLCRDSSPSS*TMSSIS Trigger: TGAGATGGAAGACATGGTCCAGGAAGATGGAGAACT...GTCTCTACACAGGAACCTTGGGCTTGGAATTGGGAGGCCCTGGCTCAGTTTGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048688.8 |
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| CDS-3UTR CCA 90 bp | CTTATATATTTCCTATATAACAAACTGAGCCAGGGCCTCCCAATTCCAAGCCCATCACAACTCTCAGGCTaGGAGCTCCCCCTCCTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: LIYFLYNKLSQGLPIPSPSQLSG*ELPLLS Trigger: GGACAGGAGGGGGAGCTCCCAGCCTGAGAGTTGTGA...TGGGCTTGGAATTGGGAGGCCCTGGCTCAGTTTGTTATATAGGAAATATATAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048688.8 |
||
| CDS-3UTR TCA 90 bp | CTGAGCCAGGGCCTCCCAATTCCAAGCCCAAGGTTCCTGTGTAGAGACTCTTGGTATTTAATGAGCTCTTaGTTGATGTTGGCTATCGTG | + |
|
Preference number: 4 (lower is better) Translates to: LSQGLPIPSPRFLCRDSWYLMSS*LMLAIV Trigger: CACGATAGCCAACATCAATCAAGAGCTCATTAAATA...CCAAGAGTCTCTACACAGGAACCTTGGGCTTGGAATTGGGAGGCCCTGGCTCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048688.8 |
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| CDS-3UTR GCA 90 bp | AACAAACTGAGCCAGGGCCTCCCAATTCCAAGCCCAAGGTTCCTGTGTAGAGACGAGGAGCATAGATGGTaGTCTCTTCATCATCTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: NKLSQGLPIPSPRFLCRDEEHRW*SLHHLQ Trigger: TTGAAGATGATGAAGAGAGCACCATCTATGCTCCTC...GTCTCTACACAGGAACCTTGGGCTTGGAATTGGGAGGCCCTGGCTCAGTTTGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048688.8 |
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| CDS-3UTR CCA 90 bp | CTTATATATTTCCTATATAACAAACTGAGCCAGGGCCTCCCAATTCCAAGCCCAATGCTGAAAGCCTCCTaGCCCCTCACTCTTCGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: LIYFLYNKLSQGLPIPSPMLKAS*PLTLRL Trigger: GAGGCGAAGAGTGAGGGGCCAGGAGGCTTTCAGCAT...TGGGCTTGGAATTGGGAGGCCCTGGCTCAGTTTGTTATATAGGAAATATATAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048688.8 |
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| CDS-3UTR TCA 90 bp | AACACACAAGATACAACACTCTTTAGGAGGGTGACTCAAACAGCTCTGCTGGAGCCACCTCGAGTGGTCTaGGATCCAATTGTATGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: NTQDTTLFRRVTQTALLEPPRVV*DPIVWV Trigger: AACCCATACAATTGGATCTCAGACCACTCGAGGTGG...CTCCAGCAGAGCTGTTTGAGTCACCCTCCTAAAGAGTGTTGTATCTTGTGTGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048688.8 |
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| CDS-3UTR TCA 90 bp | CTTATATATTTCCTATATAACAAACTGAGCCAGGGCCTCCCAATTCCAAGCCCACTTTTCTTCCCGCTCTaGGTAACGCCGGGTGCCATT | + |
|
Preference number: 4 (lower is better) Translates to: LIYFLYNKLSQGLPIPSPLFFPL*VTPGAI Trigger: AATGGCACCCGGCGTTACTCAGAGCGGGAAGAAAAG...TGGGCTTGGAATTGGGAGGCCCTGGCTCAGTTTGTTATATAGGAAATATATAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048688.8 |
||
| CDS-3UTR GCA 90 bp | GGCAATAGGCTCAGTCGCCTGACACTGAGAACTAAGTCAGGAAAAGAACACGACCTGCATTCGCCATTCTaGTCTGTAGCAAGAACTCAT | + |
|
Preference number: 4 (lower is better) Translates to: GNRLSRLTLRTKSGKEHDLHSPF*SVARTH Trigger: ATGAGTTCTTGCTACAGAGCAGAATGGCGAATGCAG...GTCGTGTTCTTTTCCTGACTTAGTTCTCAGTGTCAGGCGACTGAGCCTATTGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048688.8 |
||
| CDS-3UTR GCA 90 bp | CTTATATATTTCCTATATAACAAACTGAGCCAGGGCCTCCCAATTCCAAGCCCATGCTGCTGCTGCTGCTaGAGCTGGGATAGACATCCT | + |
|
Preference number: 4 (lower is better) Translates to: LIYFLYNKLSQGLPIPSPCCCCC*SWDRHP Trigger: AGGATGTCTATCCCAGCTGCAGCAGCAGCAGCAGCA...TGGGCTTGGAATTGGGAGGCCCTGGCTCAGTTTGTTATATAGGAAATATATAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048688.8 |
||
| CDS-3UTR CCA 90 bp | TATTTCCTATATAACAAACTGAGCCAGGGCCTCCCAATTCCAAGCCCAAGGTTCTACACCCACCAAGTTTaGGCACGCTTGCAAAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: YFLYNKLSQGLPIPSPRFYTHQV*ARLQSF Trigger: GAAGCTTTGCAAGCGTGCCCAAACTTGGTGGGTGTA...GAACCTTGGGCTTGGAATTGGGAGGCCCTGGCTCAGTTTGTTATATAGGAAATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048688.8 |
||
| CDS-3UTR TCA 90 bp | TTCCTGTGTAGAGACTCTTGGCTGCTCTGGGCCAGAAGAGCCAGGAAAAGTCTAGGATTTCAGGAACATTaGCACCAACTAAATGCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: FLCRDSWLLWARRARKSLGFQEH*HQLNAK Trigger: CTTTGCATTTAGTTGGTGTCAATGTTCCTGAAATCC...TAGACTTTTCCTGGCTCTTCTGGCCCAGAGCAGCCAAGAGTCTCTACACAGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048688.8 |
||
| CDS-3UTR GCA 90 bp | AACACACAAGATACAACACTCTTTAGGAGGGTGACTCAAACAGCTCTGCTGGAGAAGTTTGGGCACGCTTaGAAAGCTTCCAAGACTCCT | + |
|
Preference number: 4 (lower is better) Translates to: NTQDTTLFRRVTQTALLEKFGHA*KASKTP Trigger: AGGAGTCTTGGAAGCTTTGCAAGCGTGCCCAAACTT...CTCCAGCAGAGCTGTTTGAGTCACCCTCCTAAAGAGTGTTGTATCTTGTGTGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048688.8 |
||
| CDS-3UTR GCA 90 bp | TTCCTGTGTAGAGACTCTTGGCTGCTCTGGGCCAGAAGAGCCAGGAAAAGTCTATTTTCTACCTTTAAATaGTTCAGTACCCTGCACCTG | + |
|
Preference number: 4 (lower is better) Translates to: FLCRDSWLLWARRARKSLFSTFK*FSTLHL Trigger: CAGGTGCAGGGTACTGAAGCATTTAAAGGTAGAAAA...TAGACTTTTCCTGGCTCTTCTGGCCCAGAGCAGCCAAGAGTCTCTACACAGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048688.8 |
||
| CDS-3UTR TCA 90 bp | TATTTCCTATATAACAAACTGAGCCAGGGCCTCCCAATTCCAAGCCCAAGGTTCAGGTACCTGAAGATATaGCAGAGCACTTCATGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: YFLYNKLSQGLPIPSPRFRYLKI*QSTSCD Trigger: GTCACATGAAGTGCTCTGTCATATCTTCAGGTACCT...GAACCTTGGGCTTGGAATTGGGAGGCCCTGGCTCAGTTTGTTATATAGGAAATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048688.8 |
||
| CDS-3UTR TCA 90 bp | TTCCTGTGTAGAGACTCTTGGCTGCTCTGGGCCAGAAGAGCCAGGAAAAGTCTAAATTTCCCCAAAATATaGACATGCGGCATATATGTC | + |
|
Preference number: 4 (lower is better) Translates to: FLCRDSWLLWARRARKSLNFPKI*TCGIYV Trigger: GACATATATGCCGCATGTTCATATTTTGGGGAAATT...TAGACTTTTCCTGGCTCTTCTGGCCCAGAGCAGCCAAGAGTCTCTACACAGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000048688.8 |
||
| CDS-3UTR GCA 90 bp | GGCAATAGGCTCAGTCGCCTGACACTGAGAACTAAGTCAGGAAAAGAACACGACCCTAAGACAATAGTGTaGAAGTTCCTAAAACCACCT | + |
|
Preference number: 4 (lower is better) Translates to: GNRLSRLTLRTKSGKEHDPKTIV*KFLKPP Trigger: AGGTGGTTTTAGGAACTTGCACACTATTGTCTTAGG...GTCGTGTTCTTTTCCTGACTTAGTTCTCAGTGTCAGGCGACTGAGCCTATTGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048688.8 |
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| CDS-3UTR GCA 90 bp | CTTATATATTTCCTATATAACAAACTGAGCCAGGGCCTCCCAATTCCAAGCCCATTCGAAGTGGAGTCTTaGCTTTCCCACTTACTGCCG | + |
|
Preference number: 4 (lower is better) Translates to: LIYFLYNKLSQGLPIPSPFEVES*LSHLLP Trigger: CGGCAGTAAGTGGGAAAGGCAAGACTCCACTTCGAA...TGGGCTTGGAATTGGGAGGCCCTGGCTCAGTTTGTTATATAGGAAATATATAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048688.8 |
||
| CDS-3UTR GCA 90 bp | CTTATATATTTCCTATATAACAAACTGAGCCAGGGCCTCCCAATTCCAAGCCCACTACTCGCTGAAATATaGCCCTCTTCATCTGGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: LIYFLYNKLSQGLPIPSPLLAEI*PSSSGA Trigger: TGCGCCAGATGAAGAGGGGCATATTTCAGCGAGTAG...TGGGCTTGGAATTGGGAGGCCCTGGCTCAGTTTGTTATATAGGAAATATATAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048688.8 |
||
| CDS-3UTR CCA 90 bp | CAAGATACAACACTCTTTAGGAGGGTGACTCAAACAGCTCTGCTGGAGAAGAAAATCTGTGAAGCCACTTaGCATATATTCCCACCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: QDTTLFRRVTQTALLEKKICEAT*HIFPPA Trigger: CGCTGGTGGGAATATATGCCAAGTGGCTTCACAGAT...TTTCTTCTCCAGCAGAGCTGTTTGAGTCACCCTCCTAAAGAGTGTTGTATCTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048688.8 |
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| CDS-3UTR CCA 90 bp | AACAAACTGAGCCAGGGCCTCCCAATTCCAAGCCCAAGGTTCCTGTGTAGAGACAATAATTCAACAAACTaGCCAAAAGAATCCAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: NKLSQGLPIPSPRFLCRDNNSTN*PKESSF Trigger: GAAGCTGGATTCTTTTGGCCAGTTTGTTGAATTATT...GTCTCTACACAGGAACCTTGGGCTTGGAATTGGGAGGCCCTGGCTCAGTTTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048688.8 |
||
| CDS-3UTR CCA 90 bp | TATTTCCTATATAACAAACTGAGCCAGGGCCTCCCAATTCCAAGCCCAAGGTTCGGCATCCTCAGTATTTaGTCTAGTACCTGGTCCATA | + |
|
Preference number: 4 (lower is better) Translates to: YFLYNKLSQGLPIPSPRFGILSI*SSTWSI Trigger: TATGGACCAGGTACTAGACCAAATACTGAGGATGCC...GAACCTTGGGCTTGGAATTGGGAGGCCCTGGCTCAGTTTGTTATATAGGAAATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048688.8 |
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| CDS-3UTR CCA 90 bp | AACACACAAGATACAACACTCTTTAGGAGGGTGACTCAAACAGCTCTGCTGGAGGTAGTCGTCTTCAACTaGCTCTCCATTGACATCACA | + |
|
Preference number: 4 (lower is better) Translates to: NTQDTTLFRRVTQTALLEVVVFN*LSIDIT Trigger: TGTGATGTCAATGGAGAGCCAGTTGAAGACGACTAC...CTCCAGCAGAGCTGTTTGAGTCACCCTCCTAAAGAGTGTTGTATCTTGTGTGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048688.8 |
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| CDS-3UTR TCA 90 bp | CTTATATATTTCCTATATAACAAACTGAGCCAGGGCCTCCCAATTCCAAGCCCAAGAGATCCACCACTCTaGCAACTCTCAGATACAGAG | + |
|
Preference number: 4 (lower is better) Translates to: LIYFLYNKLSQGLPIPSPRDPPL*QLSDTE Trigger: CTCTGTATCTGAGAGTTGTCAGAGTGGTGGATCTCT...TGGGCTTGGAATTGGGAGGCCCTGGCTCAGTTTGTTATATAGGAAATATATAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048688.8 |
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| CDS-3UTR GCA 90 bp | TATTTCCTATATAACAAACTGAGCCAGGGCCTCCCAATTCCAAGCCCAAGGTTCAGGAGGAATCGGAAATaGTCCGTTACGATTACGAAA | + |
|
Preference number: 4 (lower is better) Translates to: YFLYNKLSQGLPIPSPRFRRNRK*SVTITK Trigger: TTTCGTAATCGTAACGGAGCATTTCCGATTCCTCCT...GAACCTTGGGCTTGGAATTGGGAGGCCCTGGCTCAGTTTGTTATATAGGAAATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048688.8 |
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| CDS-3UTR CCA 90 bp | CAAGATACAACACTCTTTAGGAGGGTGACTCAAACAGCTCTGCTGGAGAAGAAAGGCTCACGGAACATCTaGTCCAGAGAAATAAATTCC | + |
|
Preference number: 4 (lower is better) Translates to: QDTTLFRRVTQTALLEKKGSRNI*SREINS Trigger: GGAATTTATTTCTCTGGACCAGATGTTCCGTGAGCC...TTTCTTCTCCAGCAGAGCTGTTTGAGTCACCCTCCTAAAGAGTGTTGTATCTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048688.8 |
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| CDS-3UTR CCA 90 bp | AACACACAAGATACAACACTCTTTAGGAGGGTGACTCAAACAGCTCTGCTGGAGGGCATGGCTTTGTTTTaGCAACTTCTGACTCAGATA | + |
|
Preference number: 4 (lower is better) Translates to: NTQDTTLFRRVTQTALLEGMALF*QLLTQI Trigger: TATCTGAGTCAGAAGTTGCCAAAACAAAGCCATGCC...CTCCAGCAGAGCTGTTTGAGTCACCCTCCTAAAGAGTGTTGTATCTTGTGTGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048688.8 |
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| CDS-3UTR TCA 90 bp | CAAGATACAACACTCTTTAGGAGGGTGACTCAAACAGCTCTGCTGGAGAAGAAAGGAAACTGGAATCTGTaGAGCCACTTGGCATATATT | + |
|
Preference number: 4 (lower is better) Translates to: QDTTLFRRVTQTALLEKKGNWNL*SHLAYI Trigger: AATATATGCCAAGTGGCTTCACAGATTCCAGTTTCC...TTTCTTCTCCAGCAGAGCTGTTTGAGTCACCCTCCTAAAGAGTGTTGTATCTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048688.8 |
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| CDS-3UTR GCA 90 bp | CAAGATACAACACTCTTTAGGAGGGTGACTCAAACAGCTCTGCTGGAGAAGAAACACTTCATGTACAGGTaGCTTAGCATAGGGATACAA | + |
|
Preference number: 4 (lower is better) Translates to: QDTTLFRRVTQTALLEKKHFMYR*LSIGIQ Trigger: TTGTATCCCTATGCTAAGGCACCTGTACATGAAGTG...TTTCTTCTCCAGCAGAGCTGTTTGAGTCACCCTCCTAAAGAGTGTTGTATCTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048688.8 |
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| CDS-3UTR CCA 90 bp | CAAGATACAACACTCTTTAGGAGGGTGACTCAAACAGCTCTGCTGGAGAAGAAACAGCTGTTCAACATCTaGCATCTTCTTCAAAAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: QDTTLFRRVTQTALLEKKQLFNI*HLLQKG Trigger: ACCCTTTTGAAGAAGATGCCAGATGTTGAACAGCTG...TTTCTTCTCCAGCAGAGCTGTTTGAGTCACCCTCCTAAAGAGTGTTGTATCTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048688.8 |
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| CDS-3UTR CCA 90 bp | CTTATATATTTCCTATATAACAAACTGAGCCAGGGCCTCCCAATTCCAAGCCCATCATTGTTGGAATTCTaGTTGCTGACAAGCGCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: LIYFLYNKLSQGLPIPSPSLLEF*LLTSAE Trigger: CTCAGCGCTTGTCAGCAACCAGAATTCCAACAATGA...TGGGCTTGGAATTGGGAGGCCCTGGCTCAGTTTGTTATATAGGAAATATATAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048688.8 |
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| CDS-3UTR CCA 90 bp | CAAGATACAACACTCTTTAGGAGGGTGACTCAAACAGCTCTGCTGGAGAAGAAATTCGCTTTCGTTTCATaGCATGGCATGGCTTTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: QDTTLFRRVTQTALLEKKFAFVS*HGMALF Trigger: AAACAAAGCCATGCCATGCCATGAAACGAAAGCGAA...TTTCTTCTCCAGCAGAGCTGTTTGAGTCACCCTCCTAAAGAGTGTTGTATCTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048688.8 |
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| CDS-3UTR TCA 90 bp | CAAGATACAACACTCTTTAGGAGGGTGACTCAAACAGCTCTGCTGGAGAAGAAATCAGTACTAGATCTGTaGTTCCACAATTGGTCATTG | + |
|
Preference number: 4 (lower is better) Translates to: QDTTLFRRVTQTALLEKKSVLDL*FHNWSL Trigger: CAATGACCAATTGTGGAATCACAGATCTAGTACTGA...TTTCTTCTCCAGCAGAGCTGTTTGAGTCACCCTCCTAAAGAGTGTTGTATCTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048688.8 |
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| CDS-3UTR GCA 90 bp | CAAGATACAACACTCTTTAGGAGGGTGACTCAAACAGCTCTGCTGGAGAAGAAAAGAAACATCCCTAGCTaGTTTCATATCGGCTTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: QDTTLFRRVTQTALLEKKRNIPS*FHIGFD Trigger: ATCAAAGCCGATATGAAAGCAGCTAGGGATGTTTCT...TTTCTTCTCCAGCAGAGCTGTTTGAGTCACCCTCCTAAAGAGTGTTGTATCTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048688.8 |
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| CDS-3UTR CCA 90 bp | CTTATATATTTCCTATATAACAAACTGAGCCAGGGCCTCCCAATTCCAAGCCCAAAAAGACACCATCTTTaGTTAAAGAAGGCTGGATGC | + |
|
Preference number: 4 (lower is better) Translates to: LIYFLYNKLSQGLPIPSPKRHHL*LKKAGC Trigger: GCATCCAGCCTTCTTTAACCAAAGATGGTGTCTTTT...TGGGCTTGGAATTGGGAGGCCCTGGCTCAGTTTGTTATATAGGAAATATATAAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048688.8 |
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| CDS-3UTR CCA 90 bp | CAAGATACAACACTCTTTAGGAGGGTGACTCAAACAGCTCTGCTGGAGAAGAAAGTTGGCGTTGTTATTTaGAGCATTATTGTCATTGTC | + |
|
Preference number: 4 (lower is better) Translates to: QDTTLFRRVTQTALLEKKVGVVI*SIIVIV Trigger: GACAATGACAATAATGCTCCAAATAACAACGCCAAC...TTTCTTCTCCAGCAGAGCTGTTTGAGTCACCCTCCTAAAGAGTGTTGTATCTTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048688.8 |
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| CDS-3UTR CCA 90 bp | TATTTCCTATATAACAAACTGAGCCAGGGCCTCCCAATTCCAAGCCCAAGGTTCATTTGGTCTAGTACCTaGTCCATATTTAGTTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: YFLYNKLSQGLPIPSPRFIWSST*SIFSFL Trigger: CAAGAAACTAAATATGGACCAGGTACTAGACCAAAT...GAACCTTGGGCTTGGAATTGGGAGGCCCTGGCTCAGTTTGTTATATAGGAAATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048688.8 |
||
| CDS-3UTR CCA 90 bp | CAAGATACAACACTCTTTAGGAGGGTGACTCAAACAGCTCTGCTGGAGAAGAAAGCATATATGTCCAAATaGATTCTACCAACTCCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: QDTTLFRRVTQTALLEKKAYMSK*ILPTPN Trigger: ATTTGGAGTTGGTAGAATCCATTTGGACATATATGC...TTTCTTCTCCAGCAGAGCTGTTTGAGTCACCCTCCTAAAGAGTGTTGTATCTTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048688.8 |
||
| CDS GCA 90 bp | CGCTGCTGGTCACCGTCCTTGCAAAGTCCGGGCTCTGGGAAGCAGTaGTGGGTGAGCTGGCGTTTCCCGCTGTGCTGGCGGCTGTGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: RCWSPSLQSPGSGKQ*WVSWRFPLCWRLCC Trigger: GCAGCACAGCCGCCAGCACAGCGGGAAACGCCAGCTCACCCAGCACTGCTTCCCAGAGCCCGGACTTTGCAAGGACGGTGACCAGCAGCG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048688.8 |
||
| CDS CCA 90 bp | CCGTCCTTGCAAAGTCCGGGCTCTGGGAAGCAGTGCTGGGTGAGCTaGCGTTTCCCGCTGTGCTGGCGGCTGTGCTGCTGCTGCTGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: PSLQSPGSGKQCWVS*RFPLCWRLCCCCCC Trigger: GCAGCAGCAGCAGCAGCACAGCCGCCAGCACAGCGGGAAACGCCAGCTCACCCAGCACTGCTTCCCAGAGCCCGGACTTTGCAAGGACGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048688.8 |
||
| CDS CCA 90 bp | TGCTGGTCACCGTCCTTGCAAAGTCCGGGCTCTGGGAAGCAGTGCTaGGTGAGCTGGCGTTTCCCGCTGTGCTGGCGGCTGTGCTGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: CWSPSLQSPGSGKQC*VSWRFPLCWRLCCC Trigger: GCAGCAGCACAGCCGCCAGCACAGCGGGAAACGCCAGCTCACCCAGCACTGCTTCCCAGAGCCCGGACTTTGCAAGGACGGTGACCAGCA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048688.8 |
||
| CDS CCA 90 bp | GGCTCTGGGAAGCAGTGCTGGGTGAGCTGGCGTTTCCCGCTGTGCTaGCGGCTGTGCTGCTGCTGCTGCTGCTGCAGCTGGGATAGACAT | + |
|
Preference number: 5 (lower is better) Translates to: GSGKQCWVSWRFPLC*RLCCCCCCCSWDRH Trigger: ATGTCTATCCCAGCTGCAGCAGCAGCAGCAGCAGCACAGCCGCCAGCACAGCGGGAAACGCCAGCTCACCCAGCACTGCTTCCCAGAGCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048688.8 |
||
| CDS GCA 90 bp | GCCTGGATACATCTACTTCTGGAGGGCTCGGCTCGGAAGAGCCGCTaGTGGTCACCGTCCTTGCAAAGTCCGGGCTCTGGGAAGCAGTGC | + |
|
Preference number: 5 (lower is better) Translates to: AWIHLLLEGSARKSR*WSPSLQSPGSGKQC Trigger: GCACTGCTTCCCAGAGCCCGGACTTTGCAAGGACGGTGACCAGCAGCGGCTCTTCCGAGCCGAGCCCTCCAGAAGTAGATGTATCCAGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048688.8 |
||
| CDS CCA 90 bp | TGGCCTCAGAGTCCTCTGACCCACCAGGGGAGCAGACACACTGCCTaGATACATCTACTTCTGGAGGGCTCGGCTCGGAAGAGCCGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: WPQSPLTHQGSRHTA*IHLLLEGSARKSRC Trigger: GCAGCGGCTCTTCCGAGCCGAGCCCTCCAGAAGTAGATGTATCCAGGCAGTGTGTCTGCTCCCCTGGTGGGTCAGAGGACTCTGAGGCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048688.8 |
||
| CDS CCA 90 bp | TGGATACATCTACTTCTGGAGGGCTCGGCTCGGAAGAGCCGCTGCTaGTCACCGTCCTTGCAAAGTCCGGGCTCTGGGAAGCAGTGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: WIHLLLEGSARKSRC*SPSLQSPGSGKQCW Trigger: CCAGCACTGCTTCCCAGAGCCCGGACTTTGCAAGGACGGTGACCAGCAGCGGCTCTTCCGAGCCGAGCCCTCCAGAAGTAGATGTATCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048688.8 |
||
| CDS GCA 90 bp | CCTCCAGGGGAAACGGCTTCGCCTGGCCCGTCTGGTGGGAGTTGTTaGACCTCTTTCGAAGTGGAGTCTTGCCTTTCCCACTTACTGCCG | + |
|
Preference number: 5 (lower is better) Translates to: PPGETASPGPSGGSC*TSFEVESCLSHLLP Trigger: CGGCAGTAAGTGGGAAAGGCAAGACTCCACTTCGAAAGAGGTGCAACAACTCCCACCAGACGGGCCAGGCGAAGCCGTTTCCCCTGGAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048688.8 |
||
| CDS CCA 90 bp | CAGCTGCTCTCCTCCAGGGGAAACGGCTTCGCCTGGCCCGTCTGGTaGGAGTTGTTGCACCTCTTTCGAAGTGGAGTCTTGCCTTTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: QLLSSRGNGFAWPVW*ELLHLFRSGVLPFP Trigger: TGGGAAAGGCAAGACTCCACTTCGAAAGAGGTGCAACAACTCCCACCAGACGGGCCAGGCGAAGCCGTTTCCCCTGGAGGAGAGCAGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048688.8 |
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| CDS CCA 90 bp | CAGCCTTTCTCACAGCTGCTCTCCTCCAGGGGAAACGGCTTCGCCTaGCCCGTCTGGTGGGAGTTGTTGCACCTCTTTCGAAGTGGAGTC | + |
|
Preference number: 5 (lower is better) Translates to: QPFSQLLSSRGNGFA*PVWWELLHLFRSGV Trigger: GACTCCACTTCGAAAGAGGTGCAACAACTCCCACCAGACGGGCCAGGCGAAGCCGTTTCCCCTGGAGGAGAGCAGCTGTGAGAAAGGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048688.8 |
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| CDS CCA 90 bp | TCACAGCTGCTCTCCTCCAGGGGAAACGGCTTCGCCTGGCCCGTCTaGTGGGAGTTGTTGCACCTCTTTCGAAGTGGAGTCTTGCCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: SQLLSSRGNGFAWPV*WELLHLFRSGVLPF Trigger: GAAAGGCAAGACTCCACTTCGAAAGAGGTGCAACAACTCCCACCAGACGGGCCAGGCGAAGCCGTTTCCCCTGGAGGAGAGCAGCTGTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048688.8 |
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| CDS TCA 90 bp | CCTCATCAGAACACCTGCCAGTTCTCCTTTGAGACTCCTGGGGCCTaGGACAGCAGCATCTGGGGCAGACAGAGCTCTCTGCATCTCCCT | + |
|
Preference number: 5 (lower is better) Translates to: PHQNTCQFSFETPGA*DSSIWGRQSSLHLP Trigger: AGGGAGATGCAGAGAGCTCTGTCTGCCCCAGATGCTGCTGTCTCAGGCCCCAGGAGTCTCAAAGGAGAACTGGCAGGTGTTCTGATGAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048688.8 |
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| CDS CCA 90 bp | CTTCGCCTGGCCCGTCTGGTGGGAGTTGTTGCACCTCTTTCGAAGTaGAGTCTTGCCTTTCCCACTTACTGCCGTTTCCCTGGACTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: LRLARLVGVVAPLSK*SLAFPTYCRFPGLS Trigger: GGACAGTCCAGGGAAACGGCAGTAAGTGGGAAAGGCAAGACTCCACTTCGAAAGAGGTGCAACAACTCCCACCAGACGGGCCAGGCGAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048688.8 |
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| CDS GCA 90 bp | GGCCCGTCTGGTGGGAGTTGTTGCACCTCTTTCGAAGTGGAGTCTTaGCTTTCCCACTTACTGCCGTTTCCCTGGACTGTCCTGAGTCTC | + |
|
Preference number: 5 (lower is better) Translates to: GPSGGSCCTSFEVES*LSHLLPFPWTVLSL Trigger: GAGACTCAGGACAGTCCAGGGAAACGGCAGTAAGTGGGAAAGGCAAGACTCCACTTCGAAAGAGGTGCAACAACTCCCACCAGACGGGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048688.8 |
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| CDS CCA 90 bp | AGGCGGATCTCGTACCATCCGCGCCATTCACAACACAGGCTCGGCTaGTTGAAGGACGCTCCTCATCAGAACACCTGCCAGTTCTCCTTT | + |
|
Preference number: 5 (lower is better) Translates to: RRISYHPRHSQHRLG*LKDAPHQNTCQFSF Trigger: AAAGGAGAACTGGCAGGTGTTCTGATGAGGAGCGTCCTTCAACCAGCCGAGCCTGTGTTGTGAATGGCGCGGATGGTACGAGATCCGCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048688.8 |
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| CDS-3UTR CAA 90 bp | CTGAGCCAGGGCCTCCCAATTCCAAGCCCAAGGTTCCTGTGTAGAGACTCTTGGCCCGTCTGGTGGGAGTaGTTGCACCTCTTTCGAAGT | + |
|
Preference number: 5 (lower is better) Translates to: LSQGLPIPSPRFLCRDSWPVWWE*LHLFRS Trigger: ACTTCGAAAGAGGTGCAACAACTCCCACCAGACGGG...CCAAGAGTCTCTACACAGGAACCTTGGGCTTGGAATTGGGAGGCCCTGGCTCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048688.8 |
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| CDS TCA 90 bp | GGATCTCGTACCATCCGCGCCATTCACAACACAGGCTCGGCTGGTTaGAGGACGCTCCTCATCAGAACACCTGCCAGTTCTCCTTTGAGA | + |
|
Preference number: 5 (lower is better) Translates to: GSRTIRAIHNTGSAG*RTLLIRTPASSPLR Trigger: TCTCAAAGGAGAACTGGCAGGTGTTCTGATGAGGAGCGTCCTTCAACCAGCCGAGCCTGTGTTGTGAATGGCGCGGATGGTACGAGATCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048688.8 |
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| CDS-3UTR CAA 90 bp | CTGAGCCAGGGCCTCCCAATTCCAAGCCCAAGGTTCCTGTGTAGAGACTCTTGGGTCTTCAACCACGTGTaGGATGAGACCTCCCAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: LSQGLPIPSPRFLCRDSWVFNHV*DETSQE Trigger: TTCCTGGGAGGTCTCATCCAACACGTGGTTGAAGAC...CCAAGAGTCTCTACACAGGAACCTTGGGCTTGGAATTGGGAGGCCCTGGCTCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048688.8 |
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| CDS-3UTR CAA 90 bp | TTCCTGTGTAGAGACTCTTGGCTGCTCTGGGCCAGAAGAGCCAGGAAAAGTCTACCTGCCAGTTCTCCTTaGAGACTCCTGGGGCCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: FLCRDSWLLWARRARKSLPASSP*RLLGPE Trigger: CTCAGGCCCCAGGAGTCTCAAAGGAGAACTGGCAGG...TAGACTTTTCCTGGCTCTTCTGGCCCAGAGCAGCCAAGAGTCTCTACACAGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048688.8 |
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| CDS TCA 90 bp | TCCCTAGCTGCTTTCATATCGGCTTTGATCTGCTCACTGGTCACCTaGCAGCCTTTCTCACAGCTGCTCTCCTCCAGGGGAAACGGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: SLAAFISALICSLVT*QPFSQLLSSRGNGF Trigger: GAAGCCGTTTCCCCTGGAGGAGAGCAGCTGTGAGAAAGGCTGTCAGGTGACCAGTGAGCAGATCAAAGCCGATATGAAAGCAGCTAGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048688.8 |
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| CDS CCA 90 bp | AATTCCAGTTCCTGCACTCAGACCAACTCGAGCACAGCCCTTGGGTaGCTCACGGAACATCTGGTCCAGAGAAATAAATTCCAGGCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: NSSSCTQTNSSTALG*LTEHLVQRNKFQAG Trigger: CCCAGCCTGGAATTTATTTCTCTGGACCAGATGTTCCGTGAGCCACCCAAGGGCTGTGCTCGAGTTGGTCTGAGTGCAGGAACTGGAATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048688.8 |
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| CDS CCA 90 bp | GCTCTGCGGTCCGCAGTGACCTCAGCCAAGGGAAGTCGGAAATCATaGAATACGGCGCTCCATCTACAACACCCTCTAAAGTGTAGATTT | + |
|
Preference number: 5 (lower is better) Translates to: ALRSAVTSAKGSRKS*NTALHLQHPLKCRF Trigger: AAATCTACACTTTAGAGGGTGTTGTAGATGGAGCGCCGTATTCCATGATTTCCGACTTCCCTTGGCTGAGGTCACTGCGGACCGCAGAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048688.8 |
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| CDS TCA 90 bp | CCTGCTTGTTCCTCATCAGCATCCACAGGAAGAACTTCCCGATTGTaGGCTGGCATACCATTTCCACTCTCGGCTACCAGTTCTCCATCT | + |
|
Preference number: 5 (lower is better) Translates to: PACSSSASTGRTSRL*AGIPFPLSATSSPS Trigger: AGATGGAGAACTGGTAGCCGAGAGTGGAAATGGTATGCCAGCTCACAATCGGGAAGTTCTTCCTGTGGATGCTGATGAGGAACAAGCAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048688.8 |
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| CDS CCA 90 bp | TCTTTCGAAGTGGAGTCTTGCCTTTCCCACTTACTGCCGTTTCCCTaGACTGTCCTGAGTCTCCAGTCTTTTCTTCCCGCTCTGAGTAAC | + |
|
Preference number: 5 (lower is better) Translates to: SFEVESCLSHLLPFP*TVLSLQSFLPALSN Trigger: GTTACTCAGAGCGGGAAGAAAAGACTGGAGACTCAGGACAGTCCAGGGAAACGGCAGTAAGTGGGAAAGGCAAGACTCCACTTCGAAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048688.8 |
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| CDS-3UTR CAA 90 bp | GGCAATAGGCTCAGTCGCCTGACACTGAGAACTAAGTCAGGAAAAGAACACGACCAAGTTTGGGCACGCTaGCAAAGCTTCCAAGACTCC | + |
|
Preference number: 5 (lower is better) Translates to: GNRLSRLTLRTKSGKEHDQVWAR*QSFQDS Trigger: GGAGTCTTGGAAGCTTTGCAAGCGTGCCCAAACTTG...GTCGTGTTCTTTTCCTGACTTAGTTCTCAGTGTCAGGCGACTGAGCCTATTGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048688.8 |
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| CDS-3UTR CAA 90 bp | AACAAACTGAGCCAGGGCCTCCCAATTCCAAGCCCAAGGTTCCTGTGTAGAGACTGGCATGGCATGGCTTaGTTTTGGCAACTTCTGACT | + |
|
Preference number: 5 (lower is better) Translates to: NKLSQGLPIPSPRFLCRDWHGMA*FWQLLT Trigger: AGTCAGAAGTTGCCAAAACAAAGCCATGCCATGCCA...GTCTCTACACAGGAACCTTGGGCTTGGAATTGGGAGGCCCTGGCTCAGTTTGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048688.8 |
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| CDS-3UTR CAA 90 bp | GGCAATAGGCTCAGTCGCCTGACACTGAGAACTAAGTCAGGAAAAGAACACGACATCGTGTCCATCCAATaGCGGATGCGCACCTTGTTC | + |
|
Preference number: 5 (lower is better) Translates to: GNRLSRLTLRTKSGKEHDIVSIQ*RMRTLF Trigger: GAACAAGGTGCGCATCCGCAATTGGATGGACACGAT...GTCGTGTTCTTTTCCTGACTTAGTTCTCAGTGTCAGGCGACTGAGCCTATTGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048688.8 |
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| CDS GCA 90 bp | GAAAGGGACTCGAACCATTTCCAAGTGTTCCAGGTTACGGGCAGATaGCAGACCTGTTACCAAGGGCACGTATTTCAAGGAGTTTGTTGG | + |
|
Preference number: 5 (lower is better) Translates to: ERDSNHFQVFQVTGR*QTCYQGHVFQGVCW Trigger: CCAACAAACTCCTTGAAATACGTGCCCTTGGTAACAGGTCTGGCATCTGCCCGTAACCTGGAACACTTGGAAATGGTTCGAGTCCCTTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048688.8 |
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| CDS CCA 90 bp | CTCAGACCAACTCGAGCACAGCCCTTGGGTGGCTCACGGAACATCTaGTCCAGAGAAATAAATTCCAGGCTGGGCAATAATTCAACAAAC | + |
|
Preference number: 5 (lower is better) Translates to: LRPTRAQPLGGSRNI*SREINSRLGNNSTN Trigger: GTTTGTTGAATTATTGCCCAGCCTGGAATTTATTTCTCTGGACCAGATGTTCCGTGAGCCACCCAAGGGCTGTGCTCGAGTTGGTCTGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048688.8 |
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| CDS-3UTR CAA 90 bp | CTGAGCCAGGGCCTCCCAATTCCAAGCCCAAGGTTCCTGTGTAGAGACTCTTGGGGGATTTCAGGAACATaGACACCAACTAAATGCAAA | + |
|
Preference number: 5 (lower is better) Translates to: LSQGLPIPSPRFLCRDSWGISGT*TPTKCK Trigger: TTTGCATTTAGTTGGTGTCAATGTTCCTGAAATCCC...CCAAGAGTCTCTACACAGGAACCTTGGGCTTGGAATTGGGAGGCCCTGGCTCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048688.8 |
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| CDS-3UTR CAA 90 bp | TATTTCCTATATAACAAACTGAGCCAGGGCCTCCCAATTCCAAGCCCAAGGTTCTGGCACCGCACGAGGTaGATATCAACCAGTCGCATC | + |
|
Preference number: 5 (lower is better) Translates to: YFLYNKLSQGLPIPSPRFWHRTR*ISTSRI Trigger: GATGCGACTGGTTGATATCAACCTCGTGCGGTGCCA...GAACCTTGGGCTTGGAATTGGGAGGCCCTGGCTCAGTTTGTTATATAGGAAATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048688.8 |
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| CDS-3UTR CAA 90 bp | CTTATATATTTCCTATATAACAAACTGAGCCAGGGCCTCCCAATTCCAAGCCCACACAGGCTCGGCTGGTaGAAGGACGCTCCTCATCAG | + |
|
Preference number: 5 (lower is better) Translates to: LIYFLYNKLSQGLPIPSPHRLGW*KDAPHQ Trigger: CTGATGAGGAGCGTCCTTCAACCAGCCGAGCCTGTG...TGGGCTTGGAATTGGGAGGCCCTGGCTCAGTTTGTTATATAGGAAATATATAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048688.8 |
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| CDS-3UTR CAA 90 bp | AACAAACTGAGCCAGGGCCTCCCAATTCCAAGCCCAAGGTTCCTGTGTAGAGACTTGTTATCATGGAGGTaGGCGTTGTTATTTGGAGCA | + |
|
Preference number: 5 (lower is better) Translates to: NKLSQGLPIPSPRFLCRDLLSWR*ALLFGA Trigger: TGCTCCAAATAACAACGCCAACCTCCATGATAACAA...GTCTCTACACAGGAACCTTGGGCTTGGAATTGGGAGGCCCTGGCTCAGTTTGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048688.8 |
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| CDS-3UTR CAA 90 bp | TATTTCCTATATAACAAACTGAGCCAGGGCCTCCCAATTCCAAGCCCAAGGTTCACCACTAGGTCCTGCTaGTTCCTCATCAGCATCCAC | + |
|
Preference number: 5 (lower is better) Translates to: YFLYNKLSQGLPIPSPRFTTRSC*FLISIH Trigger: GTGGATGCTGATGAGGAACAAGCAGGACCTAGTGGT...GAACCTTGGGCTTGGAATTGGGAGGCCCTGGCTCAGTTTGTTATATAGGAAATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048688.8 |
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| CDS-3UTR CAA 90 bp | AACACACAAGATACAACACTCTTTAGGAGGGTGACTCAAACAGCTCTGCTGGAGGTCTGGTGGGAGTTGTaGCACCTCTTTCGAAGTGGA | + |
|
Preference number: 5 (lower is better) Translates to: NTQDTTLFRRVTQTALLEVWWEL*HLFRSG Trigger: TCCACTTCGAAAGAGGTGCAACAACTCCCACCAGAC...CTCCAGCAGAGCTGTTTGAGTCACCCTCCTAAAGAGTGTTGTATCTTGTGTGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048688.8 |
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| CDS CCA 90 bp | GCCATCTTTAGGGCAGAAAAGACACCATCTTTGGTTAAAGAAGGCTaGATGCGAACTTCATGTAACCTTCGCGCAGCAGTGATGATGAGG | + |
|
Preference number: 5 (lower is better) Translates to: AIFRAEKTPSLVKEG*MRTSCNLRAAVMMR Trigger: CCTCATCATCACTGCTGCGCGAAGGTTACATGAAGTTCGCATCCAGCCTTCTTTAACCAAAGATGGTGTCTTTTCTGCCCTAAAGATGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048688.8 |
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| CDS-3UTR CAA 90 bp | AACAAACTGAGCCAGGGCCTCCCAATTCCAAGCCCAAGGTTCCTGTGTAGAGACGGTTGGCGTTGTTATTaGGAGCATTATTGTCATTGT | + |
|
Preference number: 5 (lower is better) Translates to: NKLSQGLPIPSPRFLCRDGWRCY*EHYCHC Trigger: ACAATGACAATAATGCTCCAAATAACAACGCCAACC...GTCTCTACACAGGAACCTTGGGCTTGGAATTGGGAGGCCCTGGCTCAGTTTGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048688.8 |
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| CDS-3UTR CAA 90 bp | AACACACAAGATACAACACTCTTTAGGAGGGTGACTCAAACAGCTCTGCTGGAGGCTTTCATATCGGCTTaGATCTGCTCACTGGTCACC | + |
|
Preference number: 5 (lower is better) Translates to: NTQDTTLFRRVTQTALLEAFISA*ICSLVT Trigger: GGTGACCAGTGAGCAGATCAAAGCCGATATGAAAGC...CTCCAGCAGAGCTGTTTGAGTCACCCTCCTAAAGAGTGTTGTATCTTGTGTGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048688.8 |
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| CDS TCA 90 bp | ATTATTGTCATTGTCATTGTTGGAATTCTGGTTGCTGACAAGCGCTaGGGAAACCCCAATTCCAGTTCCTGCACTCAGACCAACTCGAGC | + |
|
Preference number: 5 (lower is better) Translates to: IIVIVIVGILVADKR*GNPNSSSCTQTNSS Trigger: GCTCGAGTTGGTCTGAGTGCAGGAACTGGAATTGGGGTTTCCTCAGCGCTTGTCAGCAACCAGAATTCCAACAATGACAATGACAATAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048688.8 |
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| CDS CCA 90 bp | TGGTCCAGAGAAATAAATTCCAGGCTGGGCAATAATTCAACAAACTaGCCAAAAGAATCCAGCTTCAAAGCATGGCACCGCACGAGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: WSREINSRLGNNSTN*PKESSFKAWHRTRL Trigger: CAACCTCGTGCGGTGCCATGCTTTGAAGCTGGATTCTTTTGGCCAGTTTGTTGAATTATTGCCCAGCCTGGAATTTATTTCTCTGGACCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048688.8 |
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| CDS-3UTR CAA 90 bp | TTCCTGTGTAGAGACTCTTGGCTGCTCTGGGCCAGAAGAGCCAGGAAAAGTCTAGGAGCATTATTGTCATaGTCATTGTTGGAATTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: FLCRDSWLLWARRARKSLGALLS*SLLEFW Trigger: CCAGAATTCCAACAATGACAATGACAATAATGCTCC...TAGACTTTTCCTGGCTCTTCTGGCCCAGAGCAGCCAAGAGTCTCTACACAGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048688.8 |
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| CDS-3UTR CAA 90 bp | GGCAATAGGCTCAGTCGCCTGACACTGAGAACTAAGTCAGGAAAAGAACACGACTCTGTGATTCCACAATaGGTCATTGTGACTCCAACA | + |
|
Preference number: 5 (lower is better) Translates to: GNRLSRLTLRTKSGKEHDSVIPQ*VIVTPT Trigger: TGTTGGAGTCACAATGACCAATTGTGGAATCACAGA...GTCGTGTTCTTTTCCTGACTTAGTTCTCAGTGTCAGGCGACTGAGCCTATTGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048688.8 |
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| CDS CCA 90 bp | GAAACTCCAATTCTGCCATCTTTAGGGCAGAAAAGACACCATCTTTaGTTAAAGAAGGCTGGATGCGAACTTCATGTAACCTTCGCGCAG | + |
|
Preference number: 5 (lower is better) Translates to: ETPILPSLGQKRHHL*LKKAGCELHVTFAQ Trigger: CTGCGCGAAGGTTACATGAAGTTCGCATCCAGCCTTCTTTAACCAAAGATGGTGTCTTTTCTGCCCTAAAGATGGCAGAATTGGAGTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048688.8 |
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| CDS-3UTR CAA 90 bp | GGCAATAGGCTCAGTCGCCTGACACTGAGAACTAAGTCAGGAAAAGAACACGACTTATTGTCATTGTCATaGTTGGAATTCTGGTTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: GNRLSRLTLRTKSGKEHDLLSLS*LEFWLL Trigger: CAGCAACCAGAATTCCAACAATGACAATGACAATAA...GTCGTGTTCTTTTCCTGACTTAGTTCTCAGTGTCAGGCGACTGAGCCTATTGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048688.8 |
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| CDS-3UTR CAA 90 bp | AACACACAAGATACAACACTCTTTAGGAGGGTGACTCAAACAGCTCTGCTGGAGAGATCTCCTCTCCTATaGTCTCCATACAAATGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: NTQDTTLFRRVTQTALLERSPLL*SPYKCL Trigger: CAGACATTTGTATGGAGACAATAGGAGAGGAGATCT...CTCCAGCAGAGCTGTTTGAGTCACCCTCCTAAAGAGTGTTGTATCTTGTGTGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048688.8 |
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| CDS-3UTR CAA 90 bp | CTTATATATTTCCTATATAACAAACTGAGCCAGGGCCTCCCAATTCCAAGCCCAACTTCCAGGGCATTCTaGCAAGCTCCTAAGACAATA | + |
|
Preference number: 5 (lower is better) Translates to: LIYFLYNKLSQGLPIPSPTSRAF*QAPKTI Trigger: TATTGTCTTAGGAGCTTGCAAGAATGCCCTGGAAGT...TGGGCTTGGAATTGGGAGGCCCTGGCTCAGTTTGTTATATAGGAAATATATAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048688.8 |
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| CDS-3UTR CAA 90 bp | CTTATATATTTCCTATATAACAAACTGAGCCAGGGCCTCCCAATTCCAAGCCCATGGATGAACATCATCTaGGGGCAGTCTTTCAGTACT | + |
|
Preference number: 5 (lower is better) Translates to: LIYFLYNKLSQGLPIPSPWMNII*GQSFST Trigger: AGTACTGAAAGACTGCCCCAAGATGATGTTCATCCA...TGGGCTTGGAATTGGGAGGCCCTGGCTCAGTTTGTTATATAGGAAATATATAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048688.8 |
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| CDS TCA 90 bp | TCTTGGAGTTCTAAACTATCTTCTTCATCATCGCTCTCTGAATCGTaGTCAGCAATTGGTGTAGGTTTTACCACGCGTTGTAGACCACTA | + |
|
Preference number: 5 (lower is better) Translates to: SWSSKLSSSSSLSES*SAIGVGFTTRCRPL Trigger: TAGTGGTCTACAACGCGTGGTAAAACCTACACCAATTGCTGATCACGATTCAGAGAGCGATGATGAAGAAGATAGTTTAGAACTCCAAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048688.8 |
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| CDS-3UTR CAA 90 bp | CAAGATACAACACTCTTTAGGAGGGTGACTCAAACAGCTCTGCTGGAGAAGAAATTGTCATTGTCATTGTaGGAATTCTGGTTGCTGACA | + |
|
Preference number: 5 (lower is better) Translates to: QDTTLFRRVTQTALLEKKLSLSL*EFWLLT Trigger: TGTCAGCAACCAGAATTCCAACAATGACAATGACAA...TTTCTTCTCCAGCAGAGCTGTTTGAGTCACCCTCCTAAAGAGTGTTGTATCTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048688.8 |
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| CDS TCA 90 bp | GGAATCGGAAATGCTCCGTTACGATTACGAAATTTCCCCAAAATATaGACATGCGGCATATATGTCCAAATGGATTCTACCAACTCCAAA | + |
|
Preference number: 5 (lower is better) Translates to: GIGNAPLRLRNFPKI*TCGIYVQMDSTNSK Trigger: TTTGGAGTTGGTAGAATCCATTTGGACATATATGCCGCATGTTCATATTTTGGGGAAATTTCGTAATCGTAACGGAGCATTTCCGATTCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048688.8 ENSMUST00000235807.2 |
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| CDS CCA 90 bp | TACGAAATTTCCCCAAAATATGAACATGCGGCATATATGTCCAAATaGATTCTACCAACTCCAAATGAGATGTTTCTACACCCACCAAGT | + |
|
Preference number: 5 (lower is better) Translates to: YEISPKYEHAAYMSK*ILPTPNEMFLHPPS Trigger: ACTTGGTGGGTGTAGAAACATCTCATTTGGAGTTGGTAGAATCCATTTGGACATATATGCCGCATGTTCATATTTTGGGGAAATTTCGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048688.8 ENSMUST00000235807.2 |
||
| CDS CCA 72 bp | CCGTCCTTGCAAAGTCCGGGCTCTGGGAAGCAGTGCTaGGTGAGCTGGCGTTTCCCGCTGTGCTGGCGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: PSLQSPGSGKQC*VSWRFPLCWRL Trigger: CAGCCGCCAGCACAGCGGGAAACGCCAGCTCACCCAGCACTGCTTCCCAGAGCCCGGACTTTGCAAGGACGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048688.8 |
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| CDS CAA 72 bp | GGCTCGGCTCGGAAGAGCCGCTGCTGGTCACCGTCCTaGCAAAGTCCGGGCTCTGGGAAGCAGTGCTGGGTG | + |
|
Preference number: 6 (lower is better) Translates to: GSARKSRCWSPS*QSPGSGKQCWV Trigger: CACCCAGCACTGCTTCCCAGAGCCCGGACTTTGCAAGGACGGTGACCAGCAGCGGCTCTTCCGAGCCGAGCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048688.8 |
||
| CDS GCA 72 bp | TCACCGTCCTTGCAAAGTCCGGGCTCTGGGAAGCAGTaGTGGGTGAGCTGGCGTTTCCCGCTGTGCTGGCGG | + |
|
Preference number: 6 (lower is better) Translates to: SPSLQSPGSGKQ*WVSWRFPLCWR Trigger: CCGCCAGCACAGCGGGAAACGCCAGCTCACCCAGCACTGCTTCCCAGAGCCCGGACTTTGCAAGGACGGTGA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048688.8 |
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| CDS GCA 72 bp | CATCTACTTCTGGAGGGCTCGGCTCGGAAGAGCCGCTaGTGGTCACCGTCCTTGCAAAGTCCGGGCTCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: HLLLEGSARKSR*WSPSLQSPGSG Trigger: CCCAGAGCCCGGACTTTGCAAGGACGGTGACCAGCAGCGGCTCTTCCGAGCCGAGCCCTCCAGAAGTAGATG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048688.8 |
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| CDS CCA 72 bp | CTACTTCTGGAGGGCTCGGCTCGGAAGAGCCGCTGCTaGTCACCGTCCTTGCAAAGTCCGGGCTCTGGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: LLLEGSARKSRC*SPSLQSPGSGK Trigger: CTTCCCAGAGCCCGGACTTTGCAAGGACGGTGACCAGCAGCGGCTCTTCCGAGCCGAGCCCTCCAGAAGTAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048688.8 |
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| CDS GCA 72 bp | TCTGCTCACTGGTCACCTGACAGCCTTTCTCACAGCTaGTCTCCTCCAGGGGAAACGGCTTCGCCTGGCCCG | + |
|
Preference number: 6 (lower is better) Translates to: SAHWSPDSLSHS*SPPGETASPGP Trigger: CGGGCCAGGCGAAGCCGTTTCCCCTGGAGGAGAGCAGCTGTGAGAAAGGCTGTCAGGTGACCAGTGAGCAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048688.8 |
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| CDS CCA 72 bp | CTCTCCTCCAGGGGAAACGGCTTCGCCTGGCCCGTCTaGTGGGAGTTGTTGCACCTCTTTCGAAGTGGAGTC | + |
|
Preference number: 6 (lower is better) Translates to: LSSRGNGFAWPV*WELLHLFRSGV Trigger: GACTCCACTTCGAAAGAGGTGCAACAACTCCCACCAGACGGGCCAGGCGAAGCCGTTTCCCCTGGAGGAGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048688.8 |
||
| CDS CCA 72 bp | TCACAGCTGCTCTCCTCCAGGGGAAACGGCTTCGCCTaGCCCGTCTGGTGGGAGTTGTTGCACCTCTTTCGA | + |
|
Preference number: 6 (lower is better) Translates to: SQLLSSRGNGFA*PVWWELLHLFR Trigger: TCGAAAGAGGTGCAACAACTCCCACCAGACGGGCCAGGCGAAGCCGTTTCCCCTGGAGGAGAGCAGCTGTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048688.8 |
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| CDS CCA 72 bp | AGGGGAGCAGACACACTGCCTGGATACATCTACTTCTaGAGGGCTCGGCTCGGAAGAGCCGCTGCTGGTCAC | + |
|
Preference number: 6 (lower is better) Translates to: RGADTLPGYIYF*RARLGRAAAGH Trigger: GTGACCAGCAGCGGCTCTTCCGAGCCGAGCCCTCCAGAAGTAGATGTATCCAGGCAGTGTGTCTGCTCCCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048688.8 |
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| CDS GCA 72 bp | TCAGAGTCCTCTGACCCACCAGGGGAGCAGACACACTaGCTGGATACATCTACTTCTGGAGGGCTCGGCTCG | + |
|
Preference number: 6 (lower is better) Translates to: SESSDPPGEQTH*LDTSTSGGLGS Trigger: CGAGCCGAGCCCTCCAGAAGTAGATGTATCCAGGCAGTGTGTCTGCTCCCCTGGTGGGTCAGAGGACTCTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048688.8 |
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| CDS CCA 72 bp | TCCTCCAGGGGAAACGGCTTCGCCTGGCCCGTCTGGTaGGAGTTGTTGCACCTCTTTCGAAGTGGAGTCTTG | + |
|
Preference number: 6 (lower is better) Translates to: SSRGNGFAWPVW*ELLHLFRSGVL Trigger: CAAGACTCCACTTCGAAAGAGGTGCAACAACTCCCACCAGACGGGCCAGGCGAAGCCGTTTCCCCTGGAGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048688.8 |
||
| CDS CAA 90 bp | TCCTCCAGGGGAAACGGCTTCGCCTGGCCCGTCTGGTGGGAGTTGTaGCACCTCTTTCGAAGTGGAGTCTTGCCTTTCCCACTTACTGCC | + |
|
Preference number: 6 (lower is better) Translates to: SSRGNGFAWPVWWEL*HLFRSGVLPFPLTA Trigger: GGCAGTAAGTGGGAAAGGCAAGACTCCACTTCGAAAGAGGTGCAACAACTCCCACCAGACGGGCCAGGCGAAGCCGTTTCCCCTGGAGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048688.8 |
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| CDS CAA 90 bp | CTCTCCTCCAGGGGAAACGGCTTCGCCTGGCCCGTCTGGTGGGAGTaGTTGCACCTCTTTCGAAGTGGAGTCTTGCCTTTCCCACTTACT | + |
|
Preference number: 6 (lower is better) Translates to: LSSRGNGFAWPVWWE*LHLFRSGVLPFPLT Trigger: AGTAAGTGGGAAAGGCAAGACTCCACTTCGAAAGAGGTGCAACAACTCCCACCAGACGGGCCAGGCGAAGCCGTTTCCCCTGGAGGAGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048688.8 |
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| CDS GCA 72 bp | GAAACGGCTTCGCCTGGCCCGTCTGGTGGGAGTTGTTaGACCTCTTTCGAAGTGGAGTCTTGCCTTTCCCAC | + |
|
Preference number: 6 (lower is better) Translates to: ETASPGPSGGSC*TSFEVESCLSH Trigger: GTGGGAAAGGCAAGACTCCACTTCGAAAGAGGTGCAACAACTCCCACCAGACGGGCCAGGCGAAGCCGTTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048688.8 |
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| CDS CCA 72 bp | TCGTACCATCCGCGCCATTCACAACACAGGCTCGGCTaGTTGAAGGACGCTCCTCATCAGAACACCTGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: SYHPRHSQHRLG*LKDAPHQNTCQ Trigger: CTGGCAGGTGTTCTGATGAGGAGCGTCCTTCAACCAGCCGAGCCTGTGTTGTGAATGGCGCGGATGGTACGA 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048688.8 |
||
| CDS CAA 72 bp | GGAAACGGCTTCGCCTGGCCCGTCTGGTGGGAGTTGTaGCACCTCTTTCGAAGTGGAGTCTTGCCTTTCCCA | + |
|
Preference number: 6 (lower is better) Translates to: GNGFAWPVWWEL*HLFRSGVLPFP Trigger: TGGGAAAGGCAAGACTCCACTTCGAAAGAGGTGCAACAACTCCCACCAGACGGGCCAGGCGAAGCCGTTTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048688.8 |
||
| CDS CAA 72 bp | AGGGGAAACGGCTTCGCCTGGCCCGTCTGGTGGGAGTaGTTGCACCTCTTTCGAAGTGGAGTCTTGCCTTTC | + |
|
Preference number: 6 (lower is better) Translates to: RGNGFAWPVWWE*LHLFRSGVLPF Trigger: GAAAGGCAAGACTCCACTTCGAAAGAGGTGCAACAACTCCCACCAGACGGGCCAGGCGAAGCCGTTTCCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048688.8 |
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| CDS CAA 72 bp | AGGACGCTCCTCATCAGAACACCTGCCAGTTCTCCTTaGAGACTCCTGGGGCCTGAGACAGCAGCATCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: RTLLIRTPASSP*RLLGPETAASG Trigger: CCCAGATGCTGCTGTCTCAGGCCCCAGGAGTCTCAAAGGAGAACTGGCAGGTGTTCTGATGAGGAGCGTCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048688.8 |
||
| CDS CAA 90 bp | CGGATCTCGTACCATCCGCGCCATTCACAACACAGGCTCGGCTGGTaGAAGGACGCTCCTCATCAGAACACCTGCCAGTTCTCCTTTGAG | + |
|
Preference number: 6 (lower is better) Translates to: RISYHPRHSQHRLGW*KDAPHQNTCQFSFE Trigger: CTCAAAGGAGAACTGGCAGGTGTTCTGATGAGGAGCGTCCTTCAACCAGCCGAGCCTGTGTTGTGAATGGCGCGGATGGTACGAGATCCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048688.8 |
||
| CDS TCA 72 bp | ACCATCCGCGCCATTCACAACACAGGCTCGGCTGGTTaGAGGACGCTCCTCATCAGAACACCTGCCAGTTCT | + |
|
Preference number: 6 (lower is better) Translates to: TIRAIHNTGSAG*RTLLIRTPASS Trigger: AGAACTGGCAGGTGTTCTGATGAGGAGCGTCCTTCAACCAGCCGAGCCTGTGTTGTGAATGGCGCGGATGGT 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048688.8 |
||
| CDS GCA 72 bp | CTTCTGACTCAGATATCAGCGGTACATGGGACAGTCTaGTCCTGGCCCTGGTTAGGGGCCTCCGAGGATAGT | + |
|
Preference number: 6 (lower is better) Translates to: LLTQISAVHGTV*SWPWLGASEDS Trigger: ACTATCCTCGGAGGCCCCTAACCAGGGCCAGGAGCAGACTGTCCCATGTACCGCTGATATCTGAGTCAGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048688.8 |
||
| CDS CAA 72 bp | TACCATCCGCGCCATTCACAACACAGGCTCGGCTGGTaGAAGGACGCTCCTCATCAGAACACCTGCCAGTTC | + |
|
Preference number: 6 (lower is better) Translates to: YHPRHSQHRLGW*KDAPHQNTCQF Trigger: GAACTGGCAGGTGTTCTGATGAGGAGCGTCCTTCAACCAGCCGAGCCTGTGTTGTGAATGGCGCGGATGGTA 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048688.8 |
||
| CDS CAA 90 bp | TGGCCCGTCTGGTGGGAGTTGTTGCACCTCTTTCGAAGTGGAGTCTaGCCTTTCCCACTTACTGCCGTTTCCCTGGACTGTCCTGAGTCT | + |
|
Preference number: 6 (lower is better) Translates to: WPVWWELLHLFRSGV*PFPLTAVSLDCPES Trigger: AGACTCAGGACAGTCCAGGGAAACGGCAGTAAGTGGGAAAGGCAAGACTCCACTTCGAAAGAGGTGCAACAACTCCCACCAGACGGGCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048688.8 |
||
| CDS CCA 72 bp | ACTCAGATATCAGCGGTACATGGGACAGTCTGCTCCTaGCCCTGGTTAGGGGCCTCCGAGGATAGTCTTCAT | + |
|
Preference number: 6 (lower is better) Translates to: TQISAVHGTVCS*PWLGASEDSLH Trigger: ATGAAGACTATCCTCGGAGGCCCCTAACCAGGGCCAGGAGCAGACTGTCCCATGTACCGCTGATATCTGAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048688.8 |
||
| CDS CAA 72 bp | CCAGTTCCTGCACTCAGACCAACTCGAGCACAGCCCTaGGGTGGCTCACGGAACATCTGGTCCAGAGAAATA | + |
|
Preference number: 6 (lower is better) Translates to: PVPALRPTRAQP*GGSRNIWSREI Trigger: TATTTCTCTGGACCAGATGTTCCGTGAGCCACCCAAGGGCTGTGCTCGAGTTGGTCTGAGTGCAGGAACTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048688.8 |
||
| CDS CAA 72 bp | TTGGCTATCGTGTCCATCCAATTGCGGATGCGCACCTaGTTCCGCACGTTGGGAGGATTGCTGAACTCGTGG | + |
|
Preference number: 6 (lower is better) Translates to: LAIVSIQLRMRT*FRTLGGLLNSW Trigger: CCACGAGTTCAGCAATCCTCCCAACGTGCGGAACAAGGTGCGCATCCGCAATTGGATGGACACGATAGCCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048688.8 |
||
| CDS TCA 72 bp | GCTTTCATATCGGCTTTGATCTGCTCACTGGTCACCTaGCAGCCTTTCTCACAGCTGCTCTCCTCCAGGGGA | + |
|
Preference number: 6 (lower is better) Translates to: AFISALICSLVT*QPFSQLLSSRG Trigger: TCCCCTGGAGGAGAGCAGCTGTGAGAAAGGCTGTCAGGTGACCAGTGAGCAGATCAAAGCCGATATGAAAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048688.8 |
||
| CDS GCA 72 bp | GGTGGGAGTTGTTGCACCTCTTTCGAAGTGGAGTCTTaGCTTTCCCACTTACTGCCGTTTCCCTGGACTGTC | + |
|
Preference number: 6 (lower is better) Translates to: GGSCCTSFEVES*LSHLLPFPWTV Trigger: GACAGTCCAGGGAAACGGCAGTAAGTGGGAAAGGCAAGACTCCACTTCGAAAGAGGTGCAACAACTCCCACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048688.8 |
||
| CDS CCA 72 bp | GTGGAGTCTTGCCTTTCCCACTTACTGCCGTTTCCCTaGACTGTCCTGAGTCTCCAGTCTTTTCTTCCCGCT | + |
|
Preference number: 6 (lower is better) Translates to: VESCLSHLLPFP*TVLSLQSFLPA Trigger: AGCGGGAAGAAAAGACTGGAGACTCAGGACAGTCCAGGGAAACGGCAGTAAGTGGGAAAGGCAAGACTCCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048688.8 |
||
| CDS CAA 72 bp | TCCATCCAATTGCGGATGCGCACCTTGTTCCGCACGTaGGGAGGATTGCTGAACTCGTGGATGATGCAGATG | + |
|
Preference number: 6 (lower is better) Translates to: SIQLRMRTLFRT*GGLLNSWMMQM Trigger: CATCTGCATCATCCACGAGTTCAGCAATCCTCCCAACGTGCGGAACAAGGTGCGCATCCGCAATTGGATGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048688.8 |
||
| CDS CAA 90 bp | ACCCCAATTCCAGTTCCTGCACTCAGACCAACTCGAGCACAGCCCTaGGGTGGCTCACGGAACATCTGGTCCAGAGAAATAAATTCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: TPIPVPALRPTRAQP*GGSRNIWSREINSR Trigger: CCTGGAATTTATTTCTCTGGACCAGATGTTCCGTGAGCCACCCAAGGGCTGTGCTCGAGTTGGTCTGAGTGCAGGAACTGGAATTGGGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048688.8 |
||
| CDS TCA 72 bp | CACCTGATCTCCAGCTGTCTTCAACCACGTGTTGGATaGGACCTCCCAGGAAAGGGACTCGAACCATTTCCA | + |
|
Preference number: 6 (lower is better) Translates to: HLISSCLQPRVG*DLPGKGLEPFP Trigger: TGGAAATGGTTCGAGTCCCTTTCCTGGGAGGTCTCATCCAACACGTGGTTGAAGACAGCTGGAGATCAGGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048688.8 |
||
| CDS CCA 72 bp | TCCTGCACTCAGACCAACTCGAGCACAGCCCTTGGGTaGCTCACGGAACATCTGGTCCAGAGAAATAAATTC | + |
|
Preference number: 6 (lower is better) Translates to: SCTQTNSSTALG*LTEHLVQRNKF Trigger: GAATTTATTTCTCTGGACCAGATGTTCCGTGAGCCACCCAAGGGCTGTGCTCGAGTTGGTCTGAGTGCAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048688.8 |
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| CDS CCA 72 bp | TCCGCAGTGACCTCAGCCAAGGGAAGTCGGAAATCATaGAATACGGCGCTCCATCTACAACACCCTCTAAAG | + |
|
Preference number: 6 (lower is better) Translates to: SAVTSAKGSRKS*NTALHLQHPLK Trigger: CTTTAGAGGGTGTTGTAGATGGAGCGCCGTATTCCATGATTTCCGACTTCCCTTGGCTGAGGTCACTGCGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048688.8 |
||
| CDS CCA 72 bp | ACTCGAGCACAGCCCTTGGGTGGCTCACGGAACATCTaGTCCAGAGAAATAAATTCCAGGCTGGGCAATAAT | + |
|
Preference number: 6 (lower is better) Translates to: TRAQPLGGSRNI*SREINSRLGNN Trigger: ATTATTGCCCAGCCTGGAATTTATTTCTCTGGACCAGATGTTCCGTGAGCCACCCAAGGGCTGTGCTCGAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048688.8 |
||
| CDS CCA 72 bp | ATCAGCATCCACAGGAAGAACTTCCCGATTGTGAGCTaGCATACCATTTCCACTCTCGGCTACCAGTTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: ISIHRKNFPIVS*HTISTLGYQFS Trigger: GGAGAACTGGTAGCCGAGAGTGGAAATGGTATGCCAGCTCACAATCGGGAAGTTCTTCCTGTGGATGCTGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048688.8 |
||
| CDS GCA 72 bp | TCGAACCATTTCCAAGTGTTCCAGGTTACGGGCAGATaGCAGACCTGTTACCAAGGGCACGTATTTCAAGGA | + |
|
Preference number: 6 (lower is better) Translates to: SNHFQVFQVTGR*QTCYQGHVFQG Trigger: TCCTTGAAATACGTGCCCTTGGTAACAGGTCTGGCATCTGCCCGTAACCTGGAACACTTGGAAATGGTTCGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048688.8 |
||
| CDS CAA 72 bp | ATGAGATGTTTCTACACCCACCAAGTTTGGGCACGCTaGCAAAGCTTCCAAGACTCCTGGGATGCTGAAAGC | + |
|
Preference number: 6 (lower is better) Translates to: MRCFYTHQVWAR*QSFQDSWDAES Trigger: GCTTTCAGCATCCCAGGAGTCTTGGAAGCTTTGCAAGCGTGCCCAAACTTGGTGGGTGTAGAAACATCTCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048688.8 ENSMUST00000235807.2 |
||
| CDS TCA 72 bp | ATTGTCATTGTTGGAATTCTGGTTGCTGACAAGCGCTaGGGAAACCCCAATTCCAGTTCCTGCACTCAGACC | + |
|
Preference number: 6 (lower is better) Translates to: IVIVGILVADKR*GNPNSSSCTQT Trigger: GGTCTGAGTGCAGGAACTGGAATTGGGGTTTCCTCAGCGCTTGTCAGCAACCAGAATTCCAACAATGACAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048688.8 |
||
| CDS GCA 72 bp | TTCAATCACAGGGTCACTGGTGCTGGTAGACTTATCTaGAGTTCGCTTTCGTTTCATGGCATGGCATGGCTT | + |
|
Preference number: 6 (lower is better) Translates to: FNHRVTGAGRLI*SSLSFHGMAWL Trigger: AAGCCATGCCATGCCATGAAACGAAAGCGAACTGCAGATAAGTCTACCAGCACCAGTGACCCTGTGATTGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048688.8 |
||
| CDS CCA 72 bp | AGGGCAGAAAAGACACCATCTTTGGTTAAAGAAGGCTaGATGCGAACTTCATGTAACCTTCGCGCAGCAGTG | + |
|
Preference number: 6 (lower is better) Translates to: RAEKTPSLVKEG*MRTSCNLRAAV Trigger: CACTGCTGCGCGAAGGTTACATGAAGTTCGCATCCAGCCTTCTTTAACCAAAGATGGTGTCTTTTCTGCCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048688.8 |
||
| CDS CCA 72 bp | TCAACAAACTGGCCAAAAGAATCCAGCTTCAAAGCATaGCACCGCACGAGGTTGATATCAACCAGTCGCATC | + |
|
Preference number: 6 (lower is better) Translates to: STNWPKESSFKA*HRTRLISTSRI Trigger: GATGCGACTGGTTGATATCAACCTCGTGCGGTGCCATGCTTTGAAGCTGGATTCTTTTGGCCAGTTTGTTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048688.8 |
||
| CDS CAA 90 bp | ATATGCCCCTCTTCATCTGGCGCATCTCTGAGATCTCCTCTCCTATaGTCTCCATACAAATGTCTGCAGACAACTGCCCTTTTCTTCGAG | + |
|
Preference number: 6 (lower is better) Translates to: ICPSSSGASLRSPLL*SPYKCLQTTALFFE Trigger: CTCGAAGAAAAGGGCAGTTGTCTGCAGACATTTGTATGGAGACAATAGGAGAGGAGATCTCAGAGATGCGCCAGATGAAGAGGGGCATAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048688.8 |
||
| CDS TCA 72 bp | TCGCTGAAATATGCCCCTCTTCATCTGGCGCATCTCTaGGATCTCCTCTCCTATTGTCTCCATACAAATGTC | + |
|
Preference number: 6 (lower is better) Translates to: SLKYAPLHLAHL*DLLSYCLHTNV Trigger: GACATTTGTATGGAGACAATAGGAGAGGAGATCTCAGAGATGCGCCAGATGAAGAGGGGCATATTTCAGCGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048688.8 |
||
| CDS GCA 72 bp | TCCAGGGCATTCTTGCAAGCTCCTAAGACAATAGTGTaGAAGTTCCTAAAACCACCTGATCTCCAGCTGTCT | + |
|
Preference number: 6 (lower is better) Translates to: SRAFLQAPKTIV*KFLKPPDLQLS Trigger: AGACAGCTGGAGATCAGGTGGTTTTAGGAACTTGCACACTATTGTCTTAGGAGCTTGCAAGAATGCCCTGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048688.8 |
||
| CDS GCA 72 bp | TGTGGTTTAGTGAGTCTCACCCACTTCATGTACAGGTaGCTTAGCATAGGGATACAAGGGATTTCAGGAACA | + |
|
Preference number: 6 (lower is better) Translates to: CGLVSLTHFMYR*LSIGIQGISGT Trigger: TGTTCCTGAAATCCCTTGTATCCCTATGCTAAGGCACCTGTACATGAAGTGGGTGAGACTCACTAAACCACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048688.8 |
||
| CDS CCA 72 bp | GAAATAAATTCCAGGCTGGGCAATAATTCAACAAACTaGCCAAAAGAATCCAGCTTCAAAGCATGGCACCGC | + |
|
Preference number: 6 (lower is better) Translates to: EINSRLGNNSTN*PKESSFKAWHR Trigger: GCGGTGCCATGCTTTGAAGCTGGATTCTTTTGGCCAGTTTGTTGAATTATTGCCCAGCCTGGAATTTATTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048688.8 |
||
| CDS CAA 90 bp | TCATGGAGGTTGGCGTTGTTATTTGGAGCATTATTGTCATTGTCATaGTTGGAATTCTGGTTGCTGACAAGCGCTGAGGAAACCCCAATT | + |
|
Preference number: 6 (lower is better) Translates to: SWRLALLFGALLSLS*LEFWLLTSAEETPI Trigger: AATTGGGGTTTCCTCAGCGCTTGTCAGCAACCAGAATTCCAACAATGACAATGACAATAATGCTCCAAATAACAACGCCAACCTCCATGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048688.8 |
||
| CDS CCA 72 bp | ATTCTGCCATCTTTAGGGCAGAAAAGACACCATCTTTaGTTAAAGAAGGCTGGATGCGAACTTCATGTAACC | + |
|
Preference number: 6 (lower is better) Translates to: ILPSLGQKRHHL*LKKAGCELHVT Trigger: GGTTACATGAAGTTCGCATCCAGCCTTCTTTAACCAAAGATGGTGTCTTTTCTGCCCTAAAGATGGCAGAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048688.8 |
||
| CDS CAA 72 bp | TGGAGGTTGGCGTTGTTATTTGGAGCATTATTGTCATaGTCATTGTTGGAATTCTGGTTGCTGACAAGCGCT | + |
|
Preference number: 6 (lower is better) Translates to: WRLALLFGALLS*SLLEFWLLTSA Trigger: AGCGCTTGTCAGCAACCAGAATTCCAACAATGACAATGACAATAATGCTCCAAATAACAACGCCAACCTCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048688.8 |
||
| CDS CAA 90 bp | TTGTTATCATGGAGGTTGGCGTTGTTATTTGGAGCATTATTGTCATaGTCATTGTTGGAATTCTGGTTGCTGACAAGCGCTGAGGAAACC | + |
|
Preference number: 6 (lower is better) Translates to: LLSWRLALLFGALLS*SLLEFWLLTSAEET Trigger: GGTTTCCTCAGCGCTTGTCAGCAACCAGAATTCCAACAATGACAATGACAATAATGCTCCAAATAACAACGCCAACCTCCATGATAACAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048688.8 |
||
| CDS TCA 72 bp | TCTAAACTATCTTCTTCATCATCGCTCTCTGAATCGTaGTCAGCAATTGGTGTAGGTTTTACCACGCGTTGT | + |
|
Preference number: 6 (lower is better) Translates to: SKLSSSSSLSES*SAIGVGFTTRC Trigger: ACAACGCGTGGTAAAACCTACACCAATTGCTGATCACGATTCAGAGAGCGATGATGAAGAAGATAGTTTAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048688.8 |
||
| CDS TCA 72 bp | AATGCTCCGTTACGATTACGAAATTTCCCCAAAATATaGACATGCGGCATATATGTCCAAATGGATTCTACC | + |
|
Preference number: 6 (lower is better) Translates to: NAPLRLRNFPKI*TCGIYVQMDST Trigger: GGTAGAATCCATTTGGACATATATGCCGCATGTTCATATTTTGGGGAAATTTCGTAATCGTAACGGAGCATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048688.8 ENSMUST00000235807.2 |
||
| CDS CCA 72 bp | TCCCCAAAATATGAACATGCGGCATATATGTCCAAATaGATTCTACCAACTCCAAATGAGATGTTTCTACAC | + |
|
Preference number: 6 (lower is better) Translates to: SPKYEHAAYMSK*ILPTPNEMFLH Trigger: GTGTAGAAACATCTCATTTGGAGTTGGTAGAATCCATTTGGACATATATGCCGCATGTTCATATTTTGGGGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048688.8 ENSMUST00000235807.2 |
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