RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FBXO36 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000073633

Ensembl transcript IDs: ENSMUST00000097672.4

Found 34 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR GCA 90 bp GCAAAAGGGGATCAGGGAGGTGGTAGTCTAAGAGACTTCCTGGCTCGAAGCCCTGGCACTAGGTGGATTTaGATGTGTGTGCAAAATCTG +
Preference number: 2 (lower is better)
Translates to: AKGDQGGGSLRDFLARSPGTRWI*MCVQNL
Trigger: CAGATTTTGCACACACATGCAAATCCACCTAGTGCC...AGGGCTTCGAGCCAGGAAGTCTCTTAGACTACCACCTCCCTGATCCCCTTTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000097672.4
3UTR-3UTR CCA 90 bp TGCTTGAGCAAGGCACTAGGTGGATTTGCATGTGTGTGCAAAATCTGGTTTTCAAGAGAGAGTGAGCTTTaGACCTGGAGATTCGGACCA +
Preference number: 2 (lower is better)
Translates to: CLSKALGGFACVCKIWFSRESEL*TWRFGP
Trigger: TGGTCCGAATCTCCAGGTCCAAAGCTCACTCTCTCT...TGAAAACCAGATTTTGCACACACATGCAAATCCACCTAGTGCCTTGCTCAAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000097672.4
3UTR CCA 72 bp AATCGGCAGAACCTGTTGTTAAGAGAGAGTGAGCTTTaGACCTGGAGATTCGGACCACTGTGGCTCCGCTGT +
Preference number: 3 (lower is better)
Translates to: NRQNLLLRESEL*TWRFGPLWLRC
Trigger: ACAGCGGAGCCACAGTGGTCCGAATCTCCAGGTCCAAAGCTCACTCTCTCTTAACAACAGGTTCTGCCGATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000097672.4
3UTR GCA 72 bp TGCTTGAGCAAGGCACTAGGTGGATTTGCATGTGTGTaGAAAATCTGGTTTTCAAGTGATGCTGGAATCGGC +
Preference number: 3 (lower is better)
Translates to: CLSKALGGFACV*KIWFSSDAGIG
Trigger: GCCGATTCCAGCATCACTTGAAAACCAGATTTTGCACACACATGCAAATCCACCTAGTGCCTTGCTCAAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000097672.4
3UTR-3UTR CAA 90 bp TGCTTGAGCAAGGCACTAGGTGGATTTGCATGTGTGTGCAAAATCTGGTTTTCAAATCGGCAGAACCTGTaGTTAAGAGAGAGTGAGCTT +
Preference number: 3 (lower is better)
Translates to: CLSKALGGFACVCKIWFSNRQNL*LRESEL
Trigger: AAGCTCACTCTCTCTTAACAACAGGTTCTGCCGATT...TGAAAACCAGATTTTGCACACACATGCAAATCCACCTAGTGCCTTGCTCAAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000097672.4
3UTR TCA 72 bp TGGATTTGCATGTGTGTGCAAAATCTGGTTTTCAAGTaGTGCTGGAATCGGCAGAACCTGTTGTTAAGAGAG +
Preference number: 3 (lower is better)
Translates to: WICMCVQNLVFK*CWNRQNLLLRE
Trigger: CTCTCTTAACAACAGGTTCTGCCGATTCCAGCATCACTTGAAAACCAGATTTTGCACACACATGCAAATCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000097672.4
CDS-3UTR CCA 90 bp GCAAAAGGGGATCAGGGAGGTGGTAGTCTAAGAGACTTCCTGGCTCGAAGCCCTGTCTTTGCTCGGCGCTaGGCCTTGTCCTACAATTTC +
Preference number: 4 (lower is better)
Translates to: AKGDQGGGSLRDFLARSPVFARR*ALSYNF
Trigger: GAAATTGTAGGACAAGGCCCAGCGCCGAGCAAAGAC...AGGGCTTCGAGCCAGGAAGTCTCTTAGACTACCACCTCCCTGATCCCCTTTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000097672.4
CDS-3UTR TCA 90 bp GCAAAAGGGGATCAGGGAGGTGGTAGTCTAAGAGACTTCCTGGCTCGAAGCCCTTTCTCCAGGTTTTGCTaGCCGATACTCACTTCTCAG +
Preference number: 4 (lower is better)
Translates to: AKGDQGGGSLRDFLARSPFSRFC*PILTSQ
Trigger: CTGAGAAGTGAGTATCGGTCAGCAAAACCTGGAGAA...AGGGCTTCGAGCCAGGAAGTCTCTTAGACTACCACCTCCCTGATCCCCTTTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000097672.4
CDS-3UTR GCA 90 bp GCAAAAGGGGATCAGGGAGGTGGTAGTCTAAGAGACTTCCTGGCTCGAAGCCCTCTAAGCAAGCTTCTCTaGCTGGTTTTCCTGTCTTTG +
Preference number: 4 (lower is better)
Translates to: AKGDQGGGSLRDFLARSPLSKLL*LVFLSL
Trigger: CAAAGACAGGAAAACCAGGCAGAGAAGCTTGCTTAG...AGGGCTTCGAGCCAGGAAGTCTCTTAGACTACCACCTCCCTGATCCCCTTTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000097672.4
CDS-3UTR TCA 90 bp TGCTTGAGCAAGGCACTAGGTGGATTTGCATGTGTGTGCAAAATCTGGTTTTCACTTCTCAAACTTGCTTaGTGTCTGGGAGAGGCTGGC +
Preference number: 4 (lower is better)
Translates to: CLSKALGGFACVCKIWFSLLKLA*CLGEAG
Trigger: GCCAGCCTCTCCCAGACATCAAGCAAGTTTGAGAAG...TGAAAACCAGATTTTGCACACACATGCAAATCCACCTAGTGCCTTGCTCAAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000097672.4
CDS-3UTR GCA 90 bp TGCTTGAGCAAGGCACTAGGTGGATTTGCATGTGTGTGCAAAATCTGGTTTTCAGTCTTTGCTTCTTCTTaGGGGTCTGCCTCTGGAGCT +
Preference number: 4 (lower is better)
Translates to: CLSKALGGFACVCKIWFSVFASS*GSASGA
Trigger: AGCTCCAGAGGCAGACCCGCAAGAAGAAGCAAAGAC...TGAAAACCAGATTTTGCACACACATGCAAATCCACCTAGTGCCTTGCTCAAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000097672.4
CDS-3UTR GCA 90 bp GCAAAATCTGGTTTTCAAGTGATGCTGGAATCGGCAGAACCTGTTGTTAAGAGAACTGGTAATAGTCTTTaGTCGGCGCTGGGCCTTGTC +
Preference number: 4 (lower is better)
Translates to: AKSGFQVMLESAEPVVKRTGNSL*SALGLV
Trigger: GACAAGGCCCAGCGCCGAGCAAAGACTATTACCAGT...TCTCTTAACAACAGGTTCTGCCGATTCCAGCATCACTTGAAAACCAGATTTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000097672.4
CDS-3UTR GCA 90 bp GCAAAATCTGGTTTTCAAGTGATGCTGGAATCGGCAGAACCTGTTGTTAAGAGATTCTTCTTGCGGGTCTaGCTCTGGAGCTGGATGTTG +
Preference number: 4 (lower is better)
Translates to: AKSGFQVMLESAEPVVKRFFLRV*LWSWML
Trigger: CAACATCCAGCTCCAGAGGCAGACCCGCAAGAAGAA...TCTCTTAACAACAGGTTCTGCCGATTCCAGCATCACTTGAAAACCAGATTTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000097672.4
CDS-3UTR CCA 90 bp GCACTAGGTGGATTTGCATGTGTGTGCAAAATCTGGTTTTCAAGTGATGCTGGAATGTCTGGGAGAGGCTaGCAATATCTTCCAGGTCCA +
Preference number: 4 (lower is better)
Translates to: ALGGFACVCKIWFSSDAGMSGRG*QYLPGP
Trigger: TGGACCTGGAAGATATTGCCAGCCTCTCCCAGACAT...TCCAGCATCACTTGAAAACCAGATTTTGCACACACATGCAAATCCACCTAGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000097672.4
CDS-3UTR CCA 90 bp GCAAAATCTGGTTTTCAAGTGATGCTGGAATCGGCAGAACCTGTTGTTAAGAGAGTCTGCCTCTGGAGCTaGATGTTGTTGGTGAGGAAC +
Preference number: 4 (lower is better)
Translates to: AKSGFQVMLESAEPVVKRVCLWS*MLLVRN
Trigger: GTTCCTCACCAACAACATCCAGCTCCAGAGGCAGAC...TCTCTTAACAACAGGTTCTGCCGATTCCAGCATCACTTGAAAACCAGATTTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000097672.4
CDS-3UTR GCA 90 bp GCACTAGGTGGATTTGCATGTGTGTGCAAAATCTGGTTTTCAAGTGATGCTGGAACAACTTCTCAAACTTaGTTGATGTCTGGGAGAGGC +
Preference number: 4 (lower is better)
Translates to: ALGGFACVCKIWFSSDAGTTSQT*LMSGRG
Trigger: GCCTCTCCCAGACATCAAGCAAGTTTGAGAAGTTGT...TCCAGCATCACTTGAAAACCAGATTTTGCACACACATGCAAATCCACCTAGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000097672.4
CDS-3UTR TCA 90 bp GCAAAATCTGGTTTTCAAGTGATGCTGGAATCGGCAGAACCTGTTGTTAAGAGATACCTTCGCACAGGTTaGAGACATAGTCTAATATTT +
Preference number: 4 (lower is better)
Translates to: AKSGFQVMLESAEPVVKRYLRTG*RHSLIF
Trigger: AAATATTAGACTATGTCTTCAACCTGTGCGAAGGTA...TCTCTTAACAACAGGTTCTGCCGATTCCAGCATCACTTGAAAACCAGATTTTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000097672.4
CDS CCA 90 bp TCTGCCTGGTTTTCCTGTCTTTGCTTCTTCTTGCGGGTCTGCCTCTaGAGCTGGATGTTGTTGGTGAGGAACATCTGCCTCCAGCCCATG +
Preference number: 5 (lower is better)
Translates to: SAWFSCLCFFLRVCL*SWMLLVRNICLQPM
Trigger: CATGGGCTGGAGGCAGATGTTCCTCACCAACAACATCCAGCTCCAGAGGCAGACCCGCAAGAAGAAGCAAAGACAGGAAAACCAGGCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000097672.4
CDS CCA 90 bp CTGAGTCCGGGTGATCAACAACTGGTAATAGTCTTTGCTCGGCGCTaGGCCTTGTCCTACAATTTCAAACAGAGTCTCCGGCAGCCACGA +
Preference number: 5 (lower is better)
Translates to: LSPGDQQLVIVFARR*ALSYNFKQSLRQPR
Trigger: TCGTGGCTGCCGGAGACTCTGTTTGAAATTGTAGGACAAGGCCCAGCGCCGAGCAAAGACTATTACCAGTTGTTGATCACCCGGACTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000097672.4
CDS-3UTR CAA 90 bp GCAAAAGGGGATCAGGGAGGTGGTAGTCTAAGAGACTTCCTGGCTCGAAGCCCTCACAACTTCTCAAACTaGCTTGATGTCTGGGAGAGG +
Preference number: 5 (lower is better)
Translates to: AKGDQGGGSLRDFLARSPHNFSN*LDVWER
Trigger: CCTCTCCCAGACATCAAGCAAGTTTGAGAAGTTGTG...AGGGCTTCGAGCCAGGAAGTCTCTTAGACTACCACCTCCCTGATCCCCTTTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000097672.4
CDS CCA 90 bp TGGTTTTCCTGTCTTTGCTTCTTCTTGCGGGTCTGCCTCTGGAGCTaGATGTTGTTGGTGAGGAACATCTGCCTCCAGCCCATGTTTTTC +
Preference number: 5 (lower is better)
Translates to: WFSCLCFFLRVCLWS*MLLVRNICLQPMFF
Trigger: GAAAAACATGGGCTGGAGGCAGATGTTCCTCACCAACAACATCCAGCTCCAGAGGCAGACCCGCAAGAAGAAGCAAAGACAGGAAAACCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000097672.4
CDS-3UTR CAA 90 bp GCAAAAGGGGATCAGGGAGGTGGTAGTCTAAGAGACTTCCTGGCTCGAAGCCCTCTTCATGGCTTTCCTTaGTTTCTCCAGGTTTTGCTG +
Preference number: 5 (lower is better)
Translates to: AKGDQGGGSLRDFLARSPLHGFP*FLQVLL
Trigger: CAGCAAAACCTGGAGAAACAAAGGAAAGCCATGAAG...AGGGCTTCGAGCCAGGAAGTCTCTTAGACTACCACCTCCCTGATCCCCTTTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000097672.4
CDS-3UTR CAA 90 bp GCAAAAGGGGATCAGGGAGGTGGTAGTCTAAGAGACTTCCTGGCTCGAAGCCCTCACAGCAAGTCACTCTaGCACAACTTCTCAAACTTG +
Preference number: 5 (lower is better)
Translates to: AKGDQGGGSLRDFLARSPHSKSL*HNFSNL
Trigger: CAAGTTTGAGAAGTTGTGCAAGAGTGACTTGCTGTG...AGGGCTTCGAGCCAGGAAGTCTCTTAGACTACCACCTCCCTGATCCCCTTTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000097672.4
CDS GCA 90 bp CTATCTGTTCCCACAGCAAGTCACTCTTGCACAACTTCTCAAACTTaGTTGATGTCTGGGAGAGGCTGGCAATATCTTCCAGGTCCAGGT +
Preference number: 5 (lower is better)
Translates to: LSVPTASHSCTTSQT*LMSGRGWQYLPGPG
Trigger: ACCTGGACCTGGAAGATATTGCCAGCCTCTCCCAGACATCAAGCAAGTTTGAGAAGTTGTGCAAGAGTGACTTGCTGTGGGAACAGATAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000097672.4
CDS-3UTR CAA 90 bp TGCTTGAGCAAGGCACTAGGTGGATTTGCATGTGTGTGCAAAATCTGGTTTTCACTGGTTTTCCTGTCTTaGCTTCTTCTTGCGGGTCTG +
Preference number: 5 (lower is better)
Translates to: CLSKALGGFACVCKIWFSLVFLS*LLLAGL
Trigger: CAGACCCGCAAGAAGAAGCAAAGACAGGAAAACCAG...TGAAAACCAGATTTTGCACACACATGCAAATCCACCTAGTGCCTTGCTCAAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000097672.4
CDS CCA 72 bp TGTCTTTGCTTCTTCTTGCGGGTCTGCCTCTGGAGCTaGATGTTGTTGGTGAGGAACATCTGCCTCCAGCCC +
Preference number: 6 (lower is better)
Translates to: CLCFFLRVCLWS*MLLVRNICLQP
Trigger: GGGCTGGAGGCAGATGTTCCTCACCAACAACATCCAGCTCCAGAGGCAGACCCGCAAGAAGAAGCAAAGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000097672.4
CDS CAA 90 bp CCGGGTGATCAACAACTGGTAATAGTCTTTGCTCGGCGCTGGGCCTaGTCCTACAATTTCAAACAGAGTCTCCGGCAGCCACGACGCCAT +
Preference number: 6 (lower is better)
Translates to: PGDQQLVIVFARRWA*SYNFKQSLRQPRRH
Trigger: ATGGCGTCGTGGCTGCCGGAGACTCTGTTTGAAATTGTAGGACAAGGCCCAGCGCCGAGCAAAGACTATTACCAGTTGTTGATCACCCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000097672.4
CDS CCA 72 bp TTTTCCTGTCTTTGCTTCTTCTTGCGGGTCTGCCTCTaGAGCTGGATGTTGTTGGTGAGGAACATCTGCCTC +
Preference number: 6 (lower is better)
Translates to: FSCLCFFLRVCL*SWMLLVRNICL
Trigger: GAGGCAGATGTTCCTCACCAACAACATCCAGCTCCAGAGGCAGACCCGCAAGAAGAAGCAAAGACAGGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000097672.4
CDS CAA 72 bp CAACAACTGGTAATAGTCTTTGCTCGGCGCTGGGCCTaGTCCTACAATTTCAAACAGAGTCTCCGGCAGCCA +
Preference number: 6 (lower is better)
Translates to: QQLVIVFARRWA*SYNFKQSLRQP
Trigger: TGGCTGCCGGAGACTCTGTTTGAAATTGTAGGACAAGGCCCAGCGCCGAGCAAAGACTATTACCAGTTGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000097672.4
CDS CAA 90 bp TCTGTTCCCACAGCAAGTCACTCTTGCACAACTTCTCAAACTTGCTaGATGTCTGGGAGAGGCTGGCAATATCTTCCAGGTCCAGGTAGC +
Preference number: 6 (lower is better)
Translates to: SVPTASHSCTTSQTC*MSGRGWQYLPGPGS
Trigger: GCTACCTGGACCTGGAAGATATTGCCAGCCTCTCCCAGACATCAAGCAAGTTTGAGAAGTTGTGCAAGAGTGACTTGCTGTGGGAACAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000097672.4
CDS CCA 72 bp GGTGATCAACAACTGGTAATAGTCTTTGCTCGGCGCTaGGCCTTGTCCTACAATTTCAAACAGAGTCTCCGG +
Preference number: 6 (lower is better)
Translates to: GDQQLVIVFARR*ALSYNFKQSLR
Trigger: CCGGAGACTCTGTTTGAAATTGTAGGACAAGGCCCAGCGCCGAGCAAAGACTATTACCAGTTGTTGATCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000097672.4
CDS CAA 72 bp TCCCACAGCAAGTCACTCTTGCACAACTTCTCAAACTaGCTTGATGTCTGGGAGAGGCTGGCAATATCTTCC +
Preference number: 6 (lower is better)
Translates to: SHSKSLLHNFSN*LDVWERLAISS
Trigger: GGAAGATATTGCCAGCCTCTCCCAGACATCAAGCAAGTTTGAGAAGTTGTGCAAGAGTGACTTGCTGTGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000097672.4
CDS GCA 72 bp TGGACTGGACTATCTGTTCCCACAGCAAGTCACTCTTaGACAACTTCTCAAACTTGCTTGATGTCTGGGAGA +
Preference number: 6 (lower is better)
Translates to: WTGLSVPTASHS*TTSQTCLMSGR
Trigger: TCTCCCAGACATCAAGCAAGTTTGAGAAGTTGTGCAAGAGTGACTTGCTGTGGGAACAGATAGTCCAGTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000097672.4
CDS CAA 72 bp ACAGCAAGTCACTCTTGCACAACTTCTCAAACTTGCTaGATGTCTGGGAGAGGCTGGCAATATCTTCCAGGT +
Preference number: 6 (lower is better)
Translates to: TASHSCTTSQTC*MSGRGWQYLPG
Trigger: ACCTGGAAGATATTGCCAGCCTCTCCCAGACATCAAGCAAGTTTGAGAAGTTGTGCAAGAGTGACTTGCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000097672.4