Pregenerated sensors for FBXO33 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000035329Ensembl transcript IDs: ENSMUST00000043204.8, ENSMUST00000161351.2, ENSMUST00000162855.2
Found 121 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TTCACGACTAATGTTGGTTTGCAAGCCTGTGCATTTACAGTTCTGTaGTTTGACTTAGCCTCAGAGGTTTCCCTGGAATATGGCTCCTTT | + |
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Preference number: 1 (lower is better) Translates to: FTTNVGLQACAFTVL*FDLASEVSLEYGSF Trigger: AAAGGAGCCATATTCCAGGGAAACCTCTGAGGCTAAGTCAAAGCACAGAACTGTAAATGCACAGGCTTGCAAACCAACATTAGTCGTGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043204.8 |
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| 3UTR-3UTR GCA 90 bp | TGGCCAGCCCCTGCCAGCATGTGGGCACTTCTTCATGTAAATCTATTCTTTGGCGCATTTACAGTTCTGTaGTTTGACTTAGCCTCAGAG | + |
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Preference number: 2 (lower is better) Translates to: WPAPASMWALLHVNLFFGAFTVL*FDLASE Trigger: CTCTGAGGCTAAGTCAAAGCACAGAACTGTAAATGC...GCCAAAGAATAGATTTACATGAAGAAGTGCCCACATGCTGGCAGGGGCTGGCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043204.8 |
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| 3UTR-3UTR CCA 90 bp | GCATTTACAGTTCTGTGCTTTGACTTAGCCTCAGAGGTTTCCCTGGAATATGGCACCTCAGATAATCATTaGCTGTATGTCCTTAAGGTC | + |
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Preference number: 2 (lower is better) Translates to: AFTVLCFDLASEVSLEYGTSDNH*LYVLKV Trigger: GACCTTAAGGACATACAGCCAATGATTATCTGAGGT...GCCATATTCCAGGGAAACCTCTGAGGCTAAGTCAAAGCACAGAACTGTAAATGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043204.8 |
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| 3UTR-3UTR CCA 90 bp | AGTGACTTGTTAGGGATTTCACGACTAATGTTGGTTTGCAAGCCTGTGCATTTATTGGCTCCTGAGCTCTaGATTCTGACAAACAAAGAA | + |
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Preference number: 2 (lower is better) Translates to: SDLLGISRLMLVCKPVHLLAPEL*ILTNKE Trigger: TTCTTTGTTTGTCAGAATCCAGAGCTCAGGAGCCAA...TAAATGCACAGGCTTGCAAACCAACATTAGTCGTGAAATCCCTAACAAGTCACT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043204.8 |
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| 3UTR-3UTR CCA 90 bp | GCATTTACAGTTCTGTGCTTTGACTTAGCCTCAGAGGTTTCCCTGGAATATGGCATGTATAAAAATATTTaGCTCCTGAGCTCTGGATTC | + |
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Preference number: 2 (lower is better) Translates to: AFTVLCFDLASEVSLEYGMYKNI*LLSSGF Trigger: GAATCCAGAGCTCAGGAGCCAAATATTTTTATACAT...GCCATATTCCAGGGAAACCTCTGAGGCTAAGTCAAAGCACAGAACTGTAAATGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043204.8 |
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| 3UTR-3UTR TCA 90 bp | AATGAGATGCTATCAGAATACATAGATGCAGTGCATTGCATACAAATCCACCAGCCCAACTACGTTCTTTaGTCAAGAAGTAGAATATAC | + |
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Preference number: 2 (lower is better) Translates to: NEMLSEYIDAVHCIQIHQPNYVL*SRSRIY Trigger: GTATATTCTACTTCTTGATCAAAGAACGTAGTTGGG...CTGGTGGATTTGTATGCAATGCACTGCATCTATGTATTCTGATAGCATCTCATT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043204.8 |
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| 3UTR GCA 72 bp | TCCAAAGCTTACAATAGAGCAGCCAGGTCTCAGCACTaGTGGGCACCCACGTTGGCTACTCACTTTATTATT | + |
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Preference number: 3 (lower is better) Translates to: SKAYNRAARSQH*WAPTLATHFII Trigger: AATAATAAAGTGAGTAGCCAACGTGGGTGCCCAGCAGTGCTGAGACCTGGCTGCTCTATTGTAAGCTTTGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043204.8 |
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| 3UTR TCA 72 bp | TGGCAGCTGACACTTGCGCTGACAGAGAGAATCCAGTaGCTTGTTAGGGATTTCACGACTAATGTTGGTTTG | + |
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Preference number: 3 (lower is better) Translates to: WQLTLALTERIQ*LVRDFTTNVGL Trigger: CAAACCAACATTAGTCGTGAAATCCCTAACAAGTCACTGGATTCTCTCTGTCAGCGCAAGTGTCAGCTGCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043204.8 |
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| 3UTR GCA 72 bp | AATGTTGGTTTGCAAGCCTGTGCATTTACAGTTCTGTaGTTTGACTTAGCCTCAGAGGTTTCCCTGGAATAT | + |
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Preference number: 3 (lower is better) Translates to: NVGLQACAFTVL*FDLASEVSLEY Trigger: ATATTCCAGGGAAACCTCTGAGGCTAAGTCAAAGCACAGAACTGTAAATGCACAGGCTTGCAAACCAACATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043204.8 |
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| 3UTR GCA 72 bp | AATGAGATGCTATCAGAATACATAGATGCAGTGCATTaGATACAAATCCACCAGGCTATGGATATTTATATA | + |
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Preference number: 3 (lower is better) Translates to: NEMLSEYIDAVH*IQIHQAMDIYI Trigger: TATATAAATATCCATAGCCTGGTGGATTTGTATGCAATGCACTGCATCTATGTATTCTGATAGCATCTCATT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043204.8 |
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| CDS-3UTR GCA 90 bp | TGGCCAGCCCCTGCCAGCATGTGGGCACTTCTTCATGTAAATCTATTCTTTGGCAGGCACTCCCGCCAGTaGGAGCAGGAGGCCGAGGCC | + |
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Preference number: 4 (lower is better) Translates to: WPAPASMWALLHVNLFFGRHSRQ*EQEAEA Trigger: GGCCTCGGCCTCCTGCTCGCACTGGCGGGAGTGCCT...GCCAAAGAATAGATTTACATGAAGAAGTGCCCACATGCTGGCAGGGGCTGGCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043204.8 |
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| CDS-3UTR GCA 90 bp | TGGCCAGCCCCTGCCAGCATGTGGGCACTTCTTCATGTAAATCTATTCTTTGGCAACTCTAGCCGCGGCTaGTCCGCGGGCGAGACGCGG | + |
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Preference number: 4 (lower is better) Translates to: WPAPASMWALLHVNLFFGNSSRG*SAGETR Trigger: CCGCGTCTCGCCCGCGGAGCAGCCGCGGCTAGAGTT...GCCAAAGAATAGATTTACATGAAGAAGTGCCCACATGCTGGCAGGGGCTGGCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043204.8 |
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| CDS-3UTR GCA 90 bp | AGTGACTTGTTAGGGATTTCACGACTAATGTTGGTTTGCAAGCCTGTGCATTTACAGCGGGAGGAGAGCTaGAGGGCCTCCCCGTCTTCC | + |
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Preference number: 4 (lower is better) Translates to: SDLLGISRLMLVCKPVHLQREES*RASPSS Trigger: GGAAGACGGGGAGGCCCTGCAGCTCTCCTCCCGCTG...TAAATGCACAGGCTTGCAAACCAACATTAGTCGTGAAATCCCTAACAAGTCACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043204.8 |
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| CDS-3UTR CCA 90 bp | TGGCCAGCCCCTGCCAGCATGTGGGCACTTCTTCATGTAAATCTATTCTTTGGCACTGGATCCACATCCTaGTCGGCTAGTTCACCTTGG | + |
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Preference number: 4 (lower is better) Translates to: WPAPASMWALLHVNLFFGTGSTS*SASSPW Trigger: CCAAGGTGAACTAGCCGACCAGGATGTGGATCCAGT...GCCAAAGAATAGATTTACATGAAGAAGTGCCCACATGCTGGCAGGGGCTGGCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043204.8 |
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| CDS-3UTR TCA 90 bp | GCATTTACAGTTCTGTGCTTTGACTTAGCCTCAGAGGTTTCCCTGGAATATGGCGCTGGAGCTCTTTCGTaGCAGGGCTTTCCAGTGCTC | + |
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Preference number: 4 (lower is better) Translates to: AFTVLCFDLASEVSLEYGAGALS*QGFPVL Trigger: GAGCACTGGAAAGCCCTGTCACGAAAGAGCTCCAGC...GCCATATTCCAGGGAAACCTCTGAGGCTAAGTCAAAGCACAGAACTGTAAATGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043204.8 |
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| CDS-3UTR TCA 90 bp | TGGCCAGCCCCTGCCAGCATGTGGGCACTTCTTCATGTAAATCTATTCTTTGGCCTGACCAAGGCCCAGTaGTACCTGCTCAATAAGGTT | + |
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Preference number: 4 (lower is better) Translates to: WPAPASMWALLHVNLFFGLTKAQ*YLLNKV Trigger: AACCTTATTGAGCAGGTATCACTGGGCCTTGGTCAG...GCCAAAGAATAGATTTACATGAAGAAGTGCCCACATGCTGGCAGGGGCTGGCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043204.8 |
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| CDS-3UTR GCA 90 bp | AATGAGATGCTATCAGAATACATAGATGCAGTGCATTGCATACAAATCCACCAGAGACGCGGAGGCAGATaGGGAGCTGGGGCCACAGCG | + |
|
Preference number: 4 (lower is better) Translates to: NEMLSEYIDAVHCIQIHQRRGGR*GAGATA Trigger: CGCTGTGGCCCCAGCTCCGCATCTGCCTCCGCGTCT...CTGGTGGATTTGTATGCAATGCACTGCATCTATGTATTCTGATAGCATCTCATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043204.8 |
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| CDS-3UTR TCA 90 bp | AGTGACTTGTTAGGGATTTCACGACTAATGTTGGTTTGCAAGCCTGTGCATTTAAGCCGCACTTGCGCATaGGGAACTCTAGCCGCGGCT | + |
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Preference number: 4 (lower is better) Translates to: SDLLGISRLMLVCKPVHLSRTCA*GTLAAA Trigger: AGCCGCGGCTAGAGTTCCTCATGCGCAAGTGCGGCT...TAAATGCACAGGCTTGCAAACCAACATTAGTCGTGAAATCCCTAACAAGTCACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043204.8 |
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| CDS-3UTR TCA 90 bp | GCATTTACAGTTCTGTGCTTTGACTTAGCCTCAGAGGTTTCCCTGGAATATGGCTGTTGTTCCGGATGCTaGGCAGCACGCACAACACCA | + |
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Preference number: 4 (lower is better) Translates to: AFTVLCFDLASEVSLEYGCCSGC*AARTTP Trigger: TGGTGTTGTGCGTGCTGCTCAGCATCCGGAACAACA...GCCATATTCCAGGGAAACCTCTGAGGCTAAGTCAAAGCACAGAACTGTAAATGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043204.8 |
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| CDS-3UTR GCA 90 bp | AGTGACTTGTTAGGGATTTCACGACTAATGTTGGTTTGCAAGCCTGTGCATTTACCCGGCGGTCGGGGTTaGGGCACTGACAAGAACAAC | + |
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Preference number: 4 (lower is better) Translates to: SDLLGISRLMLVCKPVHLPGGRG*GTDKNN Trigger: GTTGTTCTTGTCAGTGCCGCAACCCCGACCGCCGGG...TAAATGCACAGGCTTGCAAACCAACATTAGTCGTGAAATCCCTAACAAGTCACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043204.8 |
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| CDS-3UTR CCA 90 bp | AATGAGATGCTATCAGAATACATAGATGCAGTGCATTGCATACAAATCCACCAGCTGGGGCCACAGCGCTaGGTAGAAGAGGCACTCCCG | + |
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Preference number: 4 (lower is better) Translates to: NEMLSEYIDAVHCIQIHQLGPQR*VEEALP Trigger: CGGGAGTGCCTCTTCTACCCAGCGCTGTGGCCCCAG...CTGGTGGATTTGTATGCAATGCACTGCATCTATGTATTCTGATAGCATCTCATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043204.8 |
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| CDS-3UTR TCA 90 bp | AGTGACTTGTTAGGGATTTCACGACTAATGTTGGTTTGCAAGCCTGTGCATTTAAGAAGATGTGCACGATaGGCTCGCTGGGCAGCGACG | + |
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Preference number: 4 (lower is better) Translates to: SDLLGISRLMLVCKPVHLRRCAR*ARWAAT Trigger: CGTCGCTGCCCAGCGAGCTCATCGTGCACATCTTCT...TAAATGCACAGGCTTGCAAACCAACATTAGTCGTGAAATCCCTAACAAGTCACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043204.8 |
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| CDS-3UTR TCA 90 bp | AGTGACTTGTTAGGGATTTCACGACTAATGTTGGTTTGCAAGCCTGTGCATTTAGACGAGCAATGGCAATaGGGTTGTGCGCCCACACGG | + |
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Preference number: 4 (lower is better) Translates to: SDLLGISRLMLVCKPVHLDEQWQ*GCAPTR Trigger: CCGTGTGGGCGCACAACCTCATTGCCATTGCTCGTC...TAAATGCACAGGCTTGCAAACCAACATTAGTCGTGAAATCCCTAACAAGTCACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043204.8 |
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| CDS-3UTR GCA 90 bp | AGTGACTTGTTAGGGATTTCACGACTAATGTTGGTTTGCAAGCCTGTGCATTTACCAGCTCCAAGTAGATaGGCAGTACTTCCAGCCAGC | + |
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Preference number: 4 (lower is better) Translates to: SDLLGISRLMLVCKPVHLPAPSR*AVLPAS Trigger: GCTGGCTGGAAGTACTGCGCATCTACTTGGAGCTGG...TAAATGCACAGGCTTGCAAACCAACATTAGTCGTGAAATCCCTAACAAGTCACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043204.8 |
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| CDS-3UTR GCA 90 bp | GCATTTACAGTTCTGTGCTTTGACTTAGCCTCAGAGGTTTCCCTGGAATATGGCGACAGGGCTTTCCAGTaGTCATCATTTGGCATGTTG | + |
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Preference number: 4 (lower is better) Translates to: AFTVLCFDLASEVSLEYGDRAFQ*SSFGML Trigger: CAACATGCCAAATGATGAGCACTGGAAAGCCCTGTC...GCCATATTCCAGGGAAACCTCTGAGGCTAAGTCAAAGCACAGAACTGTAAATGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043204.8 |
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| CDS-3UTR CCA 90 bp | GCATTTACAGTTCTGTGCTTTGACTTAGCCTCAGAGGTTTCCCTGGAATATGGCCATGGTGTTGGCAATTaGGTTAGACAGAGACGACAG | + |
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Preference number: 4 (lower is better) Translates to: AFTVLCFDLASEVSLEYGHGVGN*VRQRRQ Trigger: CTGTCGTCTCTGTCTAACCCAATTGCCAACACCATG...GCCATATTCCAGGGAAACCTCTGAGGCTAAGTCAAAGCACAGAACTGTAAATGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043204.8 |
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| CDS-3UTR CCA 90 bp | AGTGACTTGTTAGGGATTTCACGACTAATGTTGGTTTGCAAGCCTGTGCATTTAGATAGACCCGAAGGCTaGAGCTCTTTCGTGACAGGG | + |
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Preference number: 4 (lower is better) Translates to: SDLLGISRLMLVCKPVHLDRPEG*SSFVTG Trigger: CCCTGTCACGAAAGAGCTCCAGCCTTCGGGTCTATC...TAAATGCACAGGCTTGCAAACCAACATTAGTCGTGAAATCCCTAACAAGTCACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043204.8 |
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| CDS-3UTR TCA 90 bp | GCATTTACAGTTCTGTGCTTTGACTTAGCCTCAGAGGTTTCCCTGGAATATGGCCTTTCTTCGGTGACTTaGAGCACTTTTAGGTCAGAG | + |
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Preference number: 4 (lower is better) Translates to: AFTVLCFDLASEVSLEYGLSSVT*STFRSE Trigger: CTCTGACCTAAAAGTGCTTCAAGTCACCGAAGAAAG...GCCATATTCCAGGGAAACCTCTGAGGCTAAGTCAAAGCACAGAACTGTAAATGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043204.8 |
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| CDS-3UTR GCA 90 bp | GCATTTACAGTTCTGTGCTTTGACTTAGCCTCAGAGGTTTCCCTGGAATATGGCAGGCCCAGTGATACCTaGTCAATAAGGTTCTGTACT | + |
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Preference number: 4 (lower is better) Translates to: AFTVLCFDLASEVSLEYGRPSDT*SIRFCT Trigger: AGTACAGAACCTTATTGAGCAGGTATCACTGGGCCT...GCCATATTCCAGGGAAACCTCTGAGGCTAAGTCAAAGCACAGAACTGTAAATGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043204.8 |
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| CDS-3UTR GCA 90 bp | AATGAGATGCTATCAGAATACATAGATGCAGTGCATTGCATACAAATCCACCAGAGAAAGGAGAAGATGTaGACGATGAGCTCGCTGGGC | + |
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Preference number: 4 (lower is better) Translates to: NEMLSEYIDAVHCIQIHQRKEKM*TMSSLG Trigger: GCCCAGCGAGCTCATCGTGCACATCTTCTCCTTTCT...CTGGTGGATTTGTATGCAATGCACTGCATCTATGTATTCTGATAGCATCTCATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043204.8 |
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| CDS-3UTR CCA 90 bp | AGTGACTTGTTAGGGATTTCACGACTAATGTTGGTTTGCAAGCCTGTGCATTTACGCTGCAAAGGCACATaGTTGCTATCGGTCAAGACT | + |
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Preference number: 4 (lower is better) Translates to: SDLLGISRLMLVCKPVHLRCKGT*LLSVKT Trigger: AGTCTTGACCGATAGCAACCATGTGCCTTTGCAGCG...TAAATGCACAGGCTTGCAAACCAACATTAGTCGTGAAATCCCTAACAAGTCACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043204.8 |
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| CDS-3UTR GCA 90 bp | AATGAGATGCTATCAGAATACATAGATGCAGTGCATTGCATACAAATCCACCAGGCAAAGGCACATGGTTaGTATCGGTCAAGACTCTCG | + |
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Preference number: 4 (lower is better) Translates to: NEMLSEYIDAVHCIQIHQAKAHG*YRSRLS Trigger: CGAGAGTCTTGACCGATAGCAACCATGTGCCTTTGC...CTGGTGGATTTGTATGCAATGCACTGCATCTATGTATTCTGATAGCATCTCATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043204.8 |
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| CDS-3UTR CCA 90 bp | GCATTTACAGTTCTGTGCTTTGACTTAGCCTCAGAGGTTTCCCTGGAATATGGCGACAAACTTCCTTGCTaGTGTACAACACTTATGTCT | + |
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Preference number: 4 (lower is better) Translates to: AFTVLCFDLASEVSLEYGDKLPC*CTTLMS Trigger: AGACATAAGTGTTGTACACCAGCAAGGAAGTTTGTC...GCCATATTCCAGGGAAACCTCTGAGGCTAAGTCAAAGCACAGAACTGTAAATGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043204.8 |
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| CDS-3UTR CCA 90 bp | AGTGACTTGTTAGGGATTTCACGACTAATGTTGGTTTGCAAGCCTGTGCATTTAAATAAGGTTCTGTACTaGATCCACATCCTGGTCGGC | + |
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Preference number: 4 (lower is better) Translates to: SDLLGISRLMLVCKPVHLNKVLY*IHILVG Trigger: GCCGACCAGGATGTGGATCCAGTACAGAACCTTATT...TAAATGCACAGGCTTGCAAACCAACATTAGTCGTGAAATCCCTAACAAGTCACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043204.8 |
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| 3UTR CAA 72 bp | GAATCCAGTGACTTGTTAGGGATTTCACGACTAATGTaGGTTTGCAAGCCTGTGCATTTACAGTTCTGTGCT | + |
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Preference number: 4 (lower is better) Translates to: ESSDLLGISRLM*VCKPVHLQFCA Trigger: AGCACAGAACTGTAAATGCACAGGCTTGCAAACCAACATTAGTCGTGAAATCCCTAACAAGTCACTGGATTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043204.8 |
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| CDS-3UTR TCA 90 bp | AATGAGATGCTATCAGAATACATAGATGCAGTGCATTGCATACAAATCCACCAGATCAACAATAGCCCCTaGGACACAAGTGACGTAGCT | + |
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Preference number: 4 (lower is better) Translates to: NEMLSEYIDAVHCIQIHQINNSP*DTSDVA Trigger: AGCTACGTCACTTGTGTCTCAGGGGCTATTGTTGAT...CTGGTGGATTTGTATGCAATGCACTGCATCTATGTATTCTGATAGCATCTCATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043204.8 |
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| CDS-3UTR TCA 90 bp | AGTGACTTGTTAGGGATTTCACGACTAATGTTGGTTTGCAAGCCTGTGCATTTAAGTGAAGACACTGAGTaGTTCAATGTCCAAGACTGC | + |
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Preference number: 4 (lower is better) Translates to: SDLLGISRLMLVCKPVHLSEDTE*FNVQDC Trigger: GCAGTCTTGGACATTGAATCACTCAGTGTCTTCACT...TAAATGCACAGGCTTGCAAACCAACATTAGTCGTGAAATCCCTAACAAGTCACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043204.8 |
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| CDS-3UTR GCA 90 bp | GCATTTACAGTTCTGTGCTTTGACTTAGCCTCAGAGGTTTCCCTGGAATATGGCGACAGCCATTTTAGTTaGCTACTATTGCTCAGTATT | + |
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Preference number: 4 (lower is better) Translates to: AFTVLCFDLASEVSLEYGDSHFS*LLLLSI Trigger: AATACTGAGCAATAGTAGGCAACTAAAATGGCTGTC...GCCATATTCCAGGGAAACCTCTGAGGCTAAGTCAAAGCACAGAACTGTAAATGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043204.8 |
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| CDS-3UTR GCA 90 bp | ATAATCATTGGCTGTATGTCCTTAAGGTCTGCTAACAATCCCATTAACCGTGAAAGAAGAGACAGTCGCTaGAAAGGCACATGGTTGCTA | + |
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Preference number: 4 (lower is better) Translates to: IIIGCMSLRSANNPINRERRDSR*KGTWLL Trigger: TAGCAACCATGTGCCTTTGCAGCGACTGTCTCTTCT...TTCACGGTTAATGGGATTGTTAGCAGACCTTAAGGACATACAGCCAATGATTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043204.8 |
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| CDS-3UTR CCA 90 bp | ATAATCATTGGCTGTATGTCCTTAAGGTCTGCTAACAATCCCATTAACCGTGAAATCACTGAAGCATTGTaGACCAGAAGAGACAGTCGC | + |
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Preference number: 4 (lower is better) Translates to: IIIGCMSLRSANNPINREITEAL*TRRDSR Trigger: GCGACTGTCTCTTCTGGTCCACAATGCTTCAGTGAT...TTCACGGTTAATGGGATTGTTAGCAGACCTTAAGGACATACAGCCAATGATTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043204.8 |
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| CDS-3UTR TCA 90 bp | AATGAGATGCTATCAGAATACATAGATGCAGTGCATTGCATACAAATCCACCAGAGACAGAGACGACAGTaGTGTTGGGGTTACTATTTC | + |
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Preference number: 4 (lower is better) Translates to: NEMLSEYIDAVHCIQIHQRQRRQ*CWGYYF Trigger: GAAATAGTAACCCCAACATCACTGTCGTCTCTGTCT...CTGGTGGATTTGTATGCAATGCACTGCATCTATGTATTCTGATAGCATCTCATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043204.8 |
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| CDS-3UTR TCA 90 bp | ATAATCATTGGCTGTATGTCCTTAAGGTCTGCTAACAATCCCATTAACCGTGAACAATGCTTTCTTCGGTaGCTTGAAGCACTTTTAGGT | + |
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Preference number: 4 (lower is better) Translates to: IIIGCMSLRSANNPINREQCFLR*LEALLG Trigger: ACCTAAAAGTGCTTCAAGTCACCGAAGAAAGCATTG...TTCACGGTTAATGGGATTGTTAGCAGACCTTAAGGACATACAGCCAATGATTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043204.8 |
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| CDS-3UTR GCA 90 bp | AATGAGATGCTATCAGAATACATAGATGCAGTGCATTGCATACAAATCCACCAGCTGGACAAACTTCCTTaGTGGTGTACAACACTTATG | + |
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Preference number: 4 (lower is better) Translates to: NEMLSEYIDAVHCIQIHQLDKLP*WCTTLM Trigger: CATAAGTGTTGTACACCAGCAAGGAAGTTTGTCCAG...CTGGTGGATTTGTATGCAATGCACTGCATCTATGTATTCTGATAGCATCTCATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043204.8 |
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| CDS-3UTR CCA 90 bp | AATGAGATGCTATCAGAATACATAGATGCAGTGCATTGCATACAAATCCACCAGGTGAACCCTCTCAAGTaGTATACTGGGTTTCAGAAT | + |
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Preference number: 4 (lower is better) Translates to: NEMLSEYIDAVHCIQIHQVNPLK*YTGFQN Trigger: ATTCTGAAACCCAGTATACCACTTGAGAGGGTTCAC...CTGGTGGATTTGTATGCAATGCACTGCATCTATGTATTCTGATAGCATCTCATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043204.8 |
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| CDS-3UTR CCA 90 bp | AGTGACTTGTTAGGGATTTCACGACTAATGTTGGTTTGCAAGCCTGTGCATTTATCGGCTAGTTCACCTTaGTCAAAATCAATGCTTTCT | + |
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Preference number: 4 (lower is better) Translates to: SDLLGISRLMLVCKPVHLSASSP*SKSMLS Trigger: AGAAAGCATTGATTTTGACCAAGGTGAACTAGCCGA...TAAATGCACAGGCTTGCAAACCAACATTAGTCGTGAAATCCCTAACAAGTCACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043204.8 |
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| CDS-3UTR TCA 90 bp | AATGAGATGCTATCAGAATACATAGATGCAGTGCATTGCATACAAATCCACCAGTGTTGTCTAATGACTTaGGCATCACTGAAGCATTGT | + |
|
Preference number: 4 (lower is better) Translates to: NEMLSEYIDAVHCIQIHQCCLMT*ASLKHC Trigger: ACAATGCTTCAGTGATGCTCAAGTCATTAGACAACA...CTGGTGGATTTGTATGCAATGCACTGCATCTATGTATTCTGATAGCATCTCATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043204.8 |
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| CDS-3UTR CCA 90 bp | AGTGACTTGTTAGGGATTTCACGACTAATGTTGGTTTGCAAGCCTGTGCATTTATCTCAAGTGGTATACTaGGTTTCAGAATCTTTAGCA | + |
|
Preference number: 4 (lower is better) Translates to: SDLLGISRLMLVCKPVHLSQVVY*VSESLA Trigger: TGCTAAAGATTCTGAAACCCAGTATACCACTTGAGA...TAAATGCACAGGCTTGCAAACCAACATTAGTCGTGAAATCCCTAACAAGTCACT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043204.8 |
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| CDS-3UTR CCA 90 bp | AGTGACTTGTTAGGGATTTCACGACTAATGTTGGTTTGCAAGCCTGTGCATTTAGTTGTCACTAAGATCTaGAAAACCAGATGTGTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: SDLLGISRLMLVCKPVHLVVTKI*KTRCVN Trigger: ATTGACACATCTGGTTTTCCAGATCTTAGTGACAAC...TAAATGCACAGGCTTGCAAACCAACATTAGTCGTGAAATCCCTAACAAGTCACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043204.8 |
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| CDS-3UTR GCA 90 bp | ATAATCATTGGCTGTATGTCCTTAAGGTCTGCTAACAATCCCATTAACCGTGAAAGGAACTTGTCATACTaGCTGGATATAAGATCAACA | + |
|
Preference number: 4 (lower is better) Translates to: IIIGCMSLRSANNPINRERNLSY*LDIRST Trigger: TGTTGATCTTATATCCAGGCAGTATGACAAGTTCCT...TTCACGGTTAATGGGATTGTTAGCAGACCTTAAGGACATACAGCCAATGATTAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043204.8 |
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| CDS GCA 90 bp | AGAGCTGCAGGGCCTCCCCGTCTTCCCCTCCGGTGCCCGTGTCGGTaGCGCCGCCGCTACCGCCGTCGCCCGGGCCGCCGCCTCCGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: RAAGPPRLPLRCPCR*RRRYRRRPGRRLRS Trigger: TGAGCGGAGGCGGCGGCCCGGGCGACGGCGGTAGCGGCGGCGGCACCGACACGGGCACCGGAGGGGAAGACGGGGAGGCCCTGCAGCTCT 79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043204.8 |
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| CDS GCA 90 bp | GCCGAGGCCCGCAGCCGGTCGGGCGCCGGCAGAAAGGAGAAGATGTaGACGATGAGCTCGCTGGGCAGCGACGCGGCGCCGGCCGCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: AEARSRSGAGRKEKM*TMSSLGSDAAPAAC Trigger: GCAGGCGGCCGGCGCCGCGTCGCTGCCCAGCGAGCTCATCGTGCACATCTTCTCCTTTCTGCCGGCGCCCGACCGGCTGCGGGCCTCGGC 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043204.8 |
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| CDS TCA 90 bp | CCCGCAGCCGGTCGGGCGCCGGCAGAAAGGAGAAGATGTGCACGATaGGCTCGCTGGGCAGCGACGCGGCGCCGGCCGCCTGCCCGCACA | + |
|
Preference number: 5 (lower is better) Translates to: PAAGRAPAERRRCAR*ARWAATRRRPPART Trigger: TGTGCGGGCAGGCGGCCGGCGCCGCGTCGCTGCCCAGCGAGCTCATCGTGCACATCTTCTCCTTTCTGCCGGCGCCCGACCGGCTGCGGG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043204.8 |
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| CDS GCA 90 bp | GGAACTCTAGCCGCGGCTGCTCCGCGGGCGAGACGCGGAGGCAGATaGGGAGCTGGGGCCACAGCGCTGGGTAGAAGAGGCACTCCCGCC | + |
|
Preference number: 5 (lower is better) Translates to: GTLAAAAPRARRGGR*GAGATALGRRGTPA Trigger: GGCGGGAGTGCCTCTTCTACCCAGCGCTGTGGCCCCAGCTCCGCATCTGCCTCCGCGTCTCGCCCGCGGAGCAGCCGCGGCTAGAGTTCC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043204.8 |
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| CDS GCA 90 bp | CGCACGAACCAGCCGCACTTGCGCATGAGGAACTCTAGCCGCGGCTaGTCCGCGGGCGAGACGCGGAGGCAGATGCGGAGCTGGGGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: RTNQPHLRMRNSSRG*SAGETRRQMRSWGH Trigger: GTGGCCCCAGCTCCGCATCTGCCTCCGCGTCTCGCCCGCGGAGCAGCCGCGGCTAGAGTTCCTCATGCGCAAGTGCGGCTGGTTCGTGCG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043204.8 |
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| CDS TCA 90 bp | CGAACTCAACCCGCAGCTCCCGCACGAACCAGCCGCACTTGCGCATaGGGAACTCTAGCCGCGGCTGCTCCGCGGGCGAGACGCGGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: RTQPAAPARTSRTCA*GTLAAAAPRARRGG Trigger: GCCTCCGCGTCTCGCCCGCGGAGCAGCCGCGGCTAGAGTTCCTCATGCGCAAGTGCGGCTGGTTCGTGCGGGAGCTGCGGGTTGAGTTCG 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043204.8 |
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| CDS-3UTR CAA 90 bp | TGGCCAGCCCCTGCCAGCATGTGGGCACTTCTTCATGTAAATCTATTCTTTGGCGAGACGACAGTGATGTaGGGGTTACTATTTCCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: WPAPASMWALLHVNLFFGETTVM*GLLFPA Trigger: TGCTGGAAATAGTAACCCCAACATCACTGTCGTCTC...GCCAAAGAATAGATTTACATGAAGAAGTGCCCACATGCTGGCAGGGGCTGGCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043204.8 |
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| CDS TCA 90 bp | CAGGTGTTCCATGGTGTTGGCAATTGGGTTAGACAGAGACGACAGTaGTGTTGGGGTTACTATTTCCAGCATAAACCCACAGGACAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: QVFHGVGNWVRQRRQ*CWGYYFQHKPTGQP Trigger: TGGCTGTCCTGTGGGTTTATGCTGGAAATAGTAACCCCAACATCACTGTCGTCTCTGTCTAACCCAATTGCCAACACCATGGAACACCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043204.8 |
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| CDS TCA 90 bp | GTGAAGACACTGAGTGATTCAATGTCCAAGACTGCGTGCCAAGACTaGCCAAGGCCCAGTGATACCTGCTCAATAAGGTTCTGTACTGGA | + |
|
Preference number: 5 (lower is better) Translates to: VKTLSDSMSKTACQD*PRPSDTCSIRFCTG Trigger: TCCAGTACAGAACCTTATTGAGCAGGTATCACTGGGCCTTGGTCAGTCTTGGCACGCAGTCTTGGACATTGAATCACTCAGTGTCTTCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043204.8 |
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| CDS GCA 90 bp | CCGTCAGGGTCTACCCTGCTGAGGTACGTGCTGGACAAACTTCCTTaGTGGTGTACAACACTTATGTCTCCAAAAAGACTAAACTTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: PSGSTLLRYVLDKLP*WCTTLMSPKRLNFW Trigger: CCAGAAGTTTAGTCTTTTTGGAGACATAAGTGTTGTACACCAGCAAGGAAGTTTGTCCAGCACGTACCTCAGCAGGGTAGACCCTGACGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043204.8 |
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| CDS CCA 90 bp | ACTGAAGCATTGTGGACCAGAAGAGACAGTCGCTGCAAAGGCACATaGTTGCTATCGGTCAAGACTCTCGCCATTTCAGCTGTAAAGTCA | + |
|
Preference number: 5 (lower is better) Translates to: TEALWTRRDSRCKGT*LLSVKTLAISAVKS Trigger: TGACTTTACAGCTGAAATGGCGAGAGTCTTGACCGATAGCAACCATGTGCCTTTGCAGCGACTGTCTCTTCTGGTCCACAATGCTTCAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043204.8 ENSMUST00000161351.2 |
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| CDS-3UTR CAA 90 bp | TGGCCAGCCCCTGCCAGCATGTGGGCACTTCTTCATGTAAATCTATTCTTTGGCGCTGGACAAACTTCCTaGCTGGTGTACAACACTTAT | + |
|
Preference number: 5 (lower is better) Translates to: WPAPASMWALLHVNLFFGAGQTS*LVYNTY Trigger: ATAAGTGTTGTACACCAGCAAGGAAGTTTGTCCAGC...GCCAAAGAATAGATTTACATGAAGAAGTGCCCACATGCTGGCAGGGGCTGGCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043204.8 |
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| CDS TCA 90 bp | ACAGGGCTTTCCAGTGCTCATCATTTGGCATGTTGTCTAATGACTTaGGCATCACTGAAGCATTGTGGACCAGAAGAGACAGTCGCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: TGLSSAHHLACCLMT*ASLKHCGPEETVAA Trigger: TGCAGCGACTGTCTCTTCTGGTCCACAATGCTTCAGTGATGCTCAAGTCATTAGACAACATGCCAAATGATGAGCACTGGAAAGCCCTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043204.8 ENSMUST00000161351.2 |
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| CDS CCA 90 bp | CCCAGTGATACCTGCTCAATAAGGTTCTGTACTGGATCCACATCCTaGTCGGCTAGTTCACCTTGGTCAAAATCAATGCTTTCTTCGGTG | + |
|
Preference number: 5 (lower is better) Translates to: PSDTCSIRFCTGSTS*SASSPWSKSMLSSV Trigger: CACCGAAGAAAGCATTGATTTTGACCAAGGTGAACTAGCCGACCAGGATGTGGATCCAGTACAGAACCTTATTGAGCAGGTATCACTGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043204.8 |
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| CDS CCA 90 bp | ACAGTGCACACCTGCTCAATAAGGTTCTGTACTGGATCCACATCCTaGTCGGCTAGTTCACCTTGGTCAAAATCAATGCTTTCTTCGGTG | + |
|
Preference number: 5 (lower is better) Translates to: TVHTCSIRFCTGSTS*SASSPWSKSMLSSV Trigger: CACCGAAGAAAGCATTGATTTTGACCAAGGTGAACTAGCCGACCAGGATGTGGATCCAGTACAGAACCTTATTGAGCAGGTGTGCACTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162855.2 |
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| CDS-3UTR CAA 90 bp | AGTGACTTGTTAGGGATTTCACGACTAATGTTGGTTTGCAAGCCTGTGCATTTAACGAACCAGCCGCACTaGCGCATGAGGAACTCTAGC | + |
|
Preference number: 5 (lower is better) Translates to: SDLLGISRLMLVCKPVHLTNQPH*RMRNSS Trigger: GCTAGAGTTCCTCATGCGCAAGTGCGGCTGGTTCGT...TAAATGCACAGGCTTGCAAACCAACATTAGTCGTGAAATCCCTAACAAGTCACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043204.8 |
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| CDS-3UTR CAA 90 bp | TGGCCAGCCCCTGCCAGCATGTGGGCACTTCTTCATGTAAATCTATTCTTTGGCGGATCTTCGTTTCGGTaGTCACTAAGATCTGGAAAA | + |
|
Preference number: 5 (lower is better) Translates to: WPAPASMWALLHVNLFFGGSSFR*SLRSGK Trigger: TTTTCCAGATCTTAGTGACAACCGAAACGAAGATCC...GCCAAAGAATAGATTTACATGAAGAAGTGCCCACATGCTGGCAGGGGCTGGCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043204.8 |
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| CDS TCA 90 bp | GGGCAAGTGAGCGTAGATTTACAAACCGCTCTAGTTCCACTGCAGTaGTCAGAGTGCTATTGCCAGGAATGTTGTTGTCCAGTAAACTCA | + |
|
Preference number: 5 (lower is better) Translates to: GQVSVDLQTALVPLQ*SECYCQECCCPVNS Trigger: TGAGTTTACTGGACAACAACATTCCTGGCAATAGCACTCTGATCACTGCAGTGGAACTAGAGCGGTTTGTAAATCTACGCTCACTTGCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043204.8 ENSMUST00000161351.2 |
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| CDS CCA 90 bp | TCAGGGTCTACCCTGCTGAGGTACGTGCTGGACAAACTTCCTTGCTaGTGTACAACACTTATGTCTCCAAAAAGACTAAACTTCTGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: SGSTLLRYVLDKLPC*CTTLMSPKRLNFWR Trigger: TCTCCAGAAGTTTAGTCTTTTTGGAGACATAAGTGTTGTACACCAGCAAGGAAGTTTGTCCAGCACGTACCTCAGCAGGGTAGACCCTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043204.8 |
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| CDS CCA 90 bp | TCATTTGGCATGTTGTCTAATGACTTGAGCATCACTGAAGCATTGTaGACCAGAAGAGACAGTCGCTGCAAAGGCACATGGTTGCTATCG | + |
|
Preference number: 5 (lower is better) Translates to: SFGMLSNDLSITEAL*TRRDSRCKGTWLLS Trigger: CGATAGCAACCATGTGCCTTTGCAGCGACTGTCTCTTCTGGTCCACAATGCTTCAGTGATGCTCAAGTCATTAGACAACATGCCAAATGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043204.8 ENSMUST00000161351.2 |
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| CDS TCA 90 bp | AAGGAACTTGTCATACTGCCTGGATATAAGATCAACAATAGCCCCTaGGACACAAGTGACGTAGCTGTCAAAGTGAACCCTCTCAAGTGG | + |
|
Preference number: 5 (lower is better) Translates to: KELVILPGYKINNSP*DTSDVAVKVNPLKW Trigger: CCACTTGAGAGGGTTCACTTTGACAGCTACGTCACTTGTGTCTCAGGGGCTATTGTTGATCTTATATCCAGGCAGTATGACAAGTTCCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043204.8 |
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| CDS-3UTR CAA 90 bp | ATAATCATTGGCTGTATGTCCTTAAGGTCTGCTAACAATCCCATTAACCGTGAATTCTGGAGATTCCTGTaGTTCCGGATGCTGAGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: IIIGCMSLRSANNPINREFWRFL*FRMLSS Trigger: GCTGCTCAGCATCCGGAACAACAGGAATCTCCAGAA...TTCACGGTTAATGGGATTGTTAGCAGACCTTAAGGACATACAGCCAATGATTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043204.8 |
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| CDS-3UTR CAA 90 bp | AATGAGATGCTATCAGAATACATAGATGCAGTGCATTGCATACAAATCCACCAGTGCAAAGGCACATGGTaGCTATCGGTCAAGACTCTC | + |
|
Preference number: 5 (lower is better) Translates to: NEMLSEYIDAVHCIQIHQCKGTW*LSVKTL Trigger: GAGAGTCTTGACCGATAGCAACCATGTGCCTTTGCA...CTGGTGGATTTGTATGCAATGCACTGCATCTATGTATTCTGATAGCATCTCATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043204.8 |
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| CDS-3UTR CAA 90 bp | AATGAGATGCTATCAGAATACATAGATGCAGTGCATTGCATACAAATCCACCAGAGCATCACTGAAGCATaGTGGACCAGAAGAGACAGT | + |
|
Preference number: 5 (lower is better) Translates to: NEMLSEYIDAVHCIQIHQSITEA*WTRRDS Trigger: ACTGTCTCTTCTGGTCCACAATGCTTCAGTGATGCT...CTGGTGGATTTGTATGCAATGCACTGCATCTATGTATTCTGATAGCATCTCATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043204.8 |
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| CDS TCA 90 bp | CATTTTAGTTGCCTACTATTGCTCAGTATTTCTTCAAACAGTTGTTaGATTTGCTTAATCTTCTTGCCGTCAGGGTCTACCCTGCTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: HFSCLLLLSISSNSC*ICLIFLPSGSTLLR Trigger: CCTCAGCAGGGTAGACCCTGACGGCAAGAAGATTAAGCAAATTCAACAACTGTTTGAAGAAATACTGAGCAATAGTAGGCAACTAAAATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043204.8 |
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| CDS-3UTR CAA 90 bp | AATGAGATGCTATCAGAATACATAGATGCAGTGCATTGCATACAAATCCACCAGCTATTGCCAGGAATGTaGTTGTCCAGTAAACTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: NEMLSEYIDAVHCIQIHQLLPGM*LSSKLR Trigger: CCTGAGTTTACTGGACAACAACATTCCTGGCAATAG...CTGGTGGATTTGTATGCAATGCACTGCATCTATGTATTCTGATAGCATCTCATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043204.8 |
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| CDS-3UTR CAA 90 bp | ATAATCATTGGCTGTATGTCCTTAAGGTCTGCTAACAATCCCATTAACCGTGAATCCAGTGCTCATCATTaGGCATGTTGTCTAATGACT | + |
|
Preference number: 5 (lower is better) Translates to: IIIGCMSLRSANNPINRESSAHH*ACCLMT Trigger: AGTCATTAGACAACATGCCAAATGATGAGCACTGGA...TTCACGGTTAATGGGATTGTTAGCAGACCTTAAGGACATACAGCCAATGATTAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043204.8 |
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| CDS-3UTR CAA 90 bp | ATAATCATTGGCTGTATGTCCTTAAGGTCTGCTAACAATCCCATTAACCGTGAATCATCATTTGGCATGTaGTCTAATGACTTGAGCATC | + |
|
Preference number: 5 (lower is better) Translates to: IIIGCMSLRSANNPINRESSFGM*SNDLSI Trigger: GATGCTCAAGTCATTAGACAACATGCCAAATGATGA...TTCACGGTTAATGGGATTGTTAGCAGACCTTAAGGACATACAGCCAATGATTAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043204.8 |
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| CDS-3UTR CAA 90 bp | AATGAGATGCTATCAGAATACATAGATGCAGTGCATTGCATACAAATCCACCAGAAATGGGTAAGGAACTaGTCATACTGCCTGGATATA | + |
|
Preference number: 5 (lower is better) Translates to: NEMLSEYIDAVHCIQIHQKWVRN*SYCLDI Trigger: TATATCCAGGCAGTATGACAAGTTCCTTACCCATTT...CTGGTGGATTTGTATGCAATGCACTGCATCTATGTATTCTGATAGCATCTCATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043204.8 |
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| CDS-3UTR CAA 90 bp | AATGAGATGCTATCAGAATACATAGATGCAGTGCATTGCATACAAATCCACCAGAAACAGTTGTTGAATTaGCTTAATCTTCTTGCCGTC | + |
|
Preference number: 5 (lower is better) Translates to: NEMLSEYIDAVHCIQIHQKQLLN*LNLLAV Trigger: GACGGCAAGAAGATTAAGCAAATTCAACAACTGTTT...CTGGTGGATTTGTATGCAATGCACTGCATCTATGTATTCTGATAGCATCTCATT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043204.8 |
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| CDS GCA 72 bp | AGGAGAGCTGCAGGGCCTCCCCGTCTTCCCCTCCGGTaGCCGTGTCGGTGCCGCCGCCGCTACCGCCGTCGC | + |
|
Preference number: 6 (lower is better) Translates to: RRAAGPPRLPLR*PCRCRRRYRRR Trigger: GCGACGGCGGTAGCGGCGGCGGCACCGACACGGGCACCGGAGGGGAAGACGGGGAGGCCCTGCAGCTCTCCT 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043204.8 |
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| CDS GCA 72 bp | GCCGCGGCTGCTCCGCGGGCGAGACGCGGAGGCAGATaGGGAGCTGGGGCCACAGCGCTGGGTAGAAGAGGC | + |
|
Preference number: 6 (lower is better) Translates to: AAAAPRARRGGR*GAGATALGRRG Trigger: GCCTCTTCTACCCAGCGCTGTGGCCCCAGCTCCGCATCTGCCTCCGCGTCTCGCCCGCGGAGCAGCCGCGGC 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043204.8 |
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| CDS TCA 72 bp | GGTCGGGCGCCGGCAGAAAGGAGAAGATGTGCACGATaGGCTCGCTGGGCAGCGACGCGGCGCCGGCCGCCT | + |
|
Preference number: 6 (lower is better) Translates to: GRAPAERRRCAR*ARWAATRRRPP Trigger: AGGCGGCCGGCGCCGCGTCGCTGCCCAGCGAGCTCATCGTGCACATCTTCTCCTTTCTGCCGGCGCCCGACC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043204.8 |
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| CDS GCA 72 bp | CGCAGCCGGTCGGGCGCCGGCAGAAAGGAGAAGATGTaGACGATGAGCTCGCTGGGCAGCGACGCGGCGCCG | + |
|
Preference number: 6 (lower is better) Translates to: RSRSGAGRKEKM*TMSSLGSDAAP Trigger: CGGCGCCGCGTCGCTGCCCAGCGAGCTCATCGTGCACATCTTCTCCTTTCTGCCGGCGCCCGACCGGCTGCG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043204.8 |
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| CDS TCA 72 bp | CCCGCAGCTCCCGCACGAACCAGCCGCACTTGCGCATaGGGAACTCTAGCCGCGGCTGCTCCGCGGGCGAGA | + |
|
Preference number: 6 (lower is better) Translates to: PAAPARTSRTCA*GTLAAAAPRAR Trigger: TCTCGCCCGCGGAGCAGCCGCGGCTAGAGTTCCTCATGCGCAAGTGCGGCTGGTTCGTGCGGGAGCTGCGGG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043204.8 |
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| CDS GCA 72 bp | CAGCCGCACTTGCGCATGAGGAACTCTAGCCGCGGCTaGTCCGCGGGCGAGACGCGGAGGCAGATGCGGAGC | + |
|
Preference number: 6 (lower is better) Translates to: QPHLRMRNSSRG*SAGETRRQMRS Trigger: GCTCCGCATCTGCCTCCGCGTCTCGCCCGCGGAGCAGCCGCGGCTAGAGTTCCTCATGCGCAAGTGCGGCTG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043204.8 |
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| CDS CAA 90 bp | TCCGCGGCGAACTCAACCCGCAGCTCCCGCACGAACCAGCCGCACTaGCGCATGAGGAACTCTAGCCGCGGCTGCTCCGCGGGCGAGACG | + |
|
Preference number: 6 (lower is better) Translates to: SAANSTRSSRTNQPH*RMRNSSRGCSAGET Trigger: CGTCTCGCCCGCGGAGCAGCCGCGGCTAGAGTTCCTCATGCGCAAGTGCGGCTGGTTCGTGCGGGAGCTGCGGGTTGAGTTCGCCGCGGA 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043204.8 |
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| CDS CAA 72 bp | AACTCAACCCGCAGCTCCCGCACGAACCAGCCGCACTaGCGCATGAGGAACTCTAGCCGCGGCTGCTCCGCG | + |
|
Preference number: 6 (lower is better) Translates to: NSTRSSRTNQPH*RMRNSSRGCSA Trigger: CGCGGAGCAGCCGCGGCTAGAGTTCCTCATGCGCAAGTGCGGCTGGTTCGTGCGGGAGCTGCGGGTTGAGTT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043204.8 |
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| CDS TCA 72 bp | CTTTTAGGTCAGAGCCCCGAAGACGAGCAATGGCAATaGGGTTGTGCGCCCACACGGTGTAACCATGAATTG | + |
|
Preference number: 6 (lower is better) Translates to: LLGQSPEDEQWQ*GCAPTRCNHEL Trigger: CAATTCATGGTTACACCGTGTGGGCGCACAACCTCATTGCCATTGCTCGTCTTCGGGGCTCTGACCTAAAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043204.8 ENSMUST00000162855.2 |
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| CDS TCA 72 bp | GTCCAAGACTGCGTGCCAAGACTGACCAAGGCCCAGTaGTACCTGCTCAATAAGGTTCTGTACTGGATCCAC | + |
|
Preference number: 6 (lower is better) Translates to: VQDCVPRLTKAQ*YLLNKVLYWIH Trigger: GTGGATCCAGTACAGAACCTTATTGAGCAGGTATCACTGGGCCTTGGTCAGTCTTGGCACGCAGTCTTGGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043204.8 |
||
| CDS CCA 72 bp | TTGTGGACCAGAAGAGACAGTCGCTGCAAAGGCACATaGTTGCTATCGGTCAAGACTCTCGCCATTTCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: LWTRRDSRCKGT*LLSVKTLAISA Trigger: AGCTGAAATGGCGAGAGTCTTGACCGATAGCAACCATGTGCCTTTGCAGCGACTGTCTCTTCTGGTCCACAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043204.8 ENSMUST00000161351.2 |
||
| CDS CAA 72 bp | TGGACCAGAAGAGACAGTCGCTGCAAAGGCACATGGTaGCTATCGGTCAAGACTCTCGCCATTTCAGCTGTA | + |
|
Preference number: 6 (lower is better) Translates to: WTRRDSRCKGTW*LSVKTLAISAV Trigger: TACAGCTGAAATGGCGAGAGTCTTGACCGATAGCAACCATGTGCCTTTGCAGCGACTGTCTCTTCTGGTCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043204.8 ENSMUST00000161351.2 |
||
| CDS CAA 90 bp | GAAGCATTGTGGACCAGAAGAGACAGTCGCTGCAAAGGCACATGGTaGCTATCGGTCAAGACTCTCGCCATTTCAGCTGTAAAGTCACAG | + |
|
Preference number: 6 (lower is better) Translates to: EALWTRRDSRCKGTW*LSVKTLAISAVKSQ Trigger: CTGTGACTTTACAGCTGAAATGGCGAGAGTCTTGACCGATAGCAACCATGTGCCTTTGCAGCGACTGTCTCTTCTGGTCCACAATGCTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043204.8 ENSMUST00000161351.2 |
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| CDS TCA 72 bp | CTGAGTGATTCAATGTCCAAGACTGCGTGCCAAGACTaGCCAAGGCCCAGTGATACCTGCTCAATAAGGTTC | + |
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Preference number: 6 (lower is better) Translates to: LSDSMSKTACQD*PRPSDTCSIRF Trigger: GAACCTTATTGAGCAGGTATCACTGGGCCTTGGTCAGTCTTGGCACGCAGTCTTGGACATTGAATCACTCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043204.8 |
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| CDS CAA 90 bp | GCCGTCAGGGTCTACCCTGCTGAGGTACGTGCTGGACAAACTTCCTaGCTGGTGTACAACACTTATGTCTCCAAAAAGACTAAACTTCTG | + |
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Preference number: 6 (lower is better) Translates to: AVRVYPAEVRAGQTS*LVYNTYVSKKTKLL Trigger: CAGAAGTTTAGTCTTTTTGGAGACATAAGTGTTGTACACCAGCAAGGAAGTTTGTCCAGCACGTACCTCAGCAGGGTAGACCCTGACGGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043204.8 |
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| CDS CAA 90 bp | CGCTCTAGTTCCACTGCAGTGATCAGAGTGCTATTGCCAGGAATGTaGTTGTCCAGTAAACTCAGGTGTTCCATGGTGTTGGCAATTGGG | + |
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Preference number: 6 (lower is better) Translates to: RSSSTAVIRVLLPGM*LSSKLRCSMVLAIG Trigger: CCCAATTGCCAACACCATGGAACACCTGAGTTTACTGGACAACAACATTCCTGGCAATAGCACTCTGATCACTGCAGTGGAACTAGAGCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043204.8 ENSMUST00000161351.2 |
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| CDS CAA 90 bp | GACAGGGCTTTCCAGTGCTCATCATTTGGCATGTTGTCTAATGACTaGAGCATCACTGAAGCATTGTGGACCAGAAGAGACAGTCGCTGC | + |
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Preference number: 6 (lower is better) Translates to: DRAFQCSSFGMLSND*SITEALWTRRDSRC Trigger: GCAGCGACTGTCTCTTCTGGTCCACAATGCTTCAGTGATGCTCAAGTCATTAGACAACATGCCAAATGATGAGCACTGGAAAGCCCTGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043204.8 ENSMUST00000161351.2 |
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| CDS CAA 72 bp | GGCATGTTGTCTAATGACTTGAGCATCACTGAAGCATaGTGGACCAGAAGAGACAGTCGCTGCAAAGGCACA | + |
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Preference number: 6 (lower is better) Translates to: GMLSNDLSITEA*WTRRDSRCKGT Trigger: TGTGCCTTTGCAGCGACTGTCTCTTCTGGTCCACAATGCTTCAGTGATGCTCAAGTCATTAGACAACATGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043204.8 ENSMUST00000161351.2 |
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| CDS CAA 90 bp | TTGCCAGGAATGTTGTTGTCCAGTAAACTCAGGTGTTCCATGGTGTaGGCAATTGGGTTAGACAGAGACGACAGTGATGTTGGGGTTACT | + |
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Preference number: 6 (lower is better) Translates to: LPGMLLSSKLRCSMV*AIGLDRDDSDVGVT Trigger: AGTAACCCCAACATCACTGTCGTCTCTGTCTAACCCAATTGCCAACACCATGGAACACCTGAGTTTACTGGACAACAACATTCCTGGCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043204.8 ENSMUST00000161351.2 |
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| CDS CAA 90 bp | GAGCTCTTTCGTGACAGGGCTTTCCAGTGCTCATCATTTGGCATGTaGTCTAATGACTTGAGCATCACTGAAGCATTGTGGACCAGAAGA | + |
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Preference number: 6 (lower is better) Translates to: ELFRDRAFQCSSFGM*SNDLSITEALWTRR Trigger: TCTTCTGGTCCACAATGCTTCAGTGATGCTCAAGTCATTAGACAACATGCCAAATGATGAGCACTGGAAAGCCCTGTCACGAAAGAGCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043204.8 ENSMUST00000161351.2 |
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| CDS CCA 72 bp | ATGTTGTCTAATGACTTGAGCATCACTGAAGCATTGTaGACCAGAAGAGACAGTCGCTGCAAAGGCACATGG | + |
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Preference number: 6 (lower is better) Translates to: MLSNDLSITEAL*TRRDSRCKGTW Trigger: CCATGTGCCTTTGCAGCGACTGTCTCTTCTGGTCCACAATGCTTCAGTGATGCTCAAGTCATTAGACAACAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043204.8 ENSMUST00000161351.2 |
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| CDS CAA 72 bp | GTCTACCCTGCTGAGGTACGTGCTGGACAAACTTCCTaGCTGGTGTACAACACTTATGTCTCCAAAAAGACT | + |
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Preference number: 6 (lower is better) Translates to: VYPAEVRAGQTS*LVYNTYVSKKT Trigger: AGTCTTTTTGGAGACATAAGTGTTGTACACCAGCAAGGAAGTTTGTCCAGCACGTACCTCAGCAGGGTAGAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043204.8 |
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| CDS CAA 72 bp | ACTGCAGTGATCAGAGTGCTATTGCCAGGAATGTTGTaGTCCAGTAAACTCAGGTGTTCCATGGTGTTGGCA | + |
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Preference number: 6 (lower is better) Translates to: TAVIRVLLPGML*SSKLRCSMVLA Trigger: TGCCAACACCATGGAACACCTGAGTTTACTGGACAACAACATTCCTGGCAATAGCACTCTGATCACTGCAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043204.8 ENSMUST00000161351.2 |
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| CDS CAA 72 bp | TCCACTGCAGTGATCAGAGTGCTATTGCCAGGAATGTaGTTGTCCAGTAAACTCAGGTGTTCCATGGTGTTG | + |
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Preference number: 6 (lower is better) Translates to: STAVIRVLLPGM*LSSKLRCSMVL Trigger: CAACACCATGGAACACCTGAGTTTACTGGACAACAACATTCCTGGCAATAGCACTCTGATCACTGCAGTGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043204.8 ENSMUST00000161351.2 |
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| CDS CAA 72 bp | AACCGCTCTAGTTCCACTGCAGTGATCAGAGTGCTATaGCCAGGAATGTTGTTGTCCAGTAAACTCAGGTGT | + |
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Preference number: 6 (lower is better) Translates to: NRSSSTAVIRVL*PGMLLSSKLRC Trigger: ACACCTGAGTTTACTGGACAACAACATTCCTGGCAATAGCACTCTGATCACTGCAGTGGAACTAGAGCGGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043204.8 ENSMUST00000161351.2 |
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| CDS CAA 90 bp | TCTAGTTCCACTGCAGTGATCAGAGTGCTATTGCCAGGAATGTTGTaGTCCAGTAAACTCAGGTGTTCCATGGTGTTGGCAATTGGGTTA | + |
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Preference number: 6 (lower is better) Translates to: SSSTAVIRVLLPGML*SSKLRCSMVLAIGL Trigger: TAACCCAATTGCCAACACCATGGAACACCTGAGTTTACTGGACAACAACATTCCTGGCAATAGCACTCTGATCACTGCAGTGGAACTAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043204.8 ENSMUST00000161351.2 |
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| CDS CAA 90 bp | AGATTTACAAACCGCTCTAGTTCCACTGCAGTGATCAGAGTGCTATaGCCAGGAATGTTGTTGTCCAGTAAACTCAGGTGTTCCATGGTG | + |
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Preference number: 6 (lower is better) Translates to: RFTNRSSSTAVIRVL*PGMLLSSKLRCSMV Trigger: CACCATGGAACACCTGAGTTTACTGGACAACAACATTCCTGGCAATAGCACTCTGATCACTGCAGTGGAACTAGAGCGGTTTGTAAATCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043204.8 ENSMUST00000161351.2 |
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| CDS CAA 90 bp | TCATCATTTGGCATGTTGTCTAATGACTTGAGCATCACTGAAGCATaGTGGACCAGAAGAGACAGTCGCTGCAAAGGCACATGGTTGCTA | + |
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Preference number: 6 (lower is better) Translates to: SSFGMLSNDLSITEA*WTRRDSRCKGTWLL Trigger: TAGCAACCATGTGCCTTTGCAGCGACTGTCTCTTCTGGTCCACAATGCTTCAGTGATGCTCAAGTCATTAGACAACATGCCAAATGATGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043204.8 ENSMUST00000161351.2 |
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| CDS TCA 72 bp | CATGGTGTTGGCAATTGGGTTAGACAGAGACGACAGTaGTGTTGGGGTTACTATTTCCAGCATAAACCCACA | + |
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Preference number: 6 (lower is better) Translates to: HGVGNWVRQRRQ*CWGYYFQHKPT Trigger: TGTGGGTTTATGCTGGAAATAGTAACCCCAACATCACTGTCGTCTCTGTCTAACCCAATTGCCAACACCATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043204.8 |
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| CDS TCA 72 bp | AGCGTAGATTTACAAACCGCTCTAGTTCCACTGCAGTaGTCAGAGTGCTATTGCCAGGAATGTTGTTGTCCA | + |
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Preference number: 6 (lower is better) Translates to: SVDLQTALVPLQ*SECYCQECCCP Trigger: TGGACAACAACATTCCTGGCAATAGCACTCTGATCACTGCAGTGGAACTAGAGCGGTTTGTAAATCTACGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043204.8 ENSMUST00000161351.2 |
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| CDS TCA 72 bp | GTCATACTGCCTGGATATAAGATCAACAATAGCCCCTaGGACACAAGTGACGTAGCTGTCAAAGTGAACCCT | + |
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Preference number: 6 (lower is better) Translates to: VILPGYKINNSP*DTSDVAVKVNP Trigger: AGGGTTCACTTTGACAGCTACGTCACTTGTGTCTCAGGGGCTATTGTTGATCTTATATCCAGGCAGTATGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043204.8 |
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| CDS GCA 72 bp | TCTACCCTGCTGAGGTACGTGCTGGACAAACTTCCTTaGTGGTGTACAACACTTATGTCTCCAAAAAGACTA | + |
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Preference number: 6 (lower is better) Translates to: STLLRYVLDKLP*WCTTLMSPKRL Trigger: TAGTCTTTTTGGAGACATAAGTGTTGTACACCAGCAAGGAAGTTTGTCCAGCACGTACCTCAGCAGGGTAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043204.8 |
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| CDS CCA 72 bp | ACCTGCTCAATAAGGTTCTGTACTGGATCCACATCCTaGTCGGCTAGTTCACCTTGGTCAAAATCAATGCTT | + |
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Preference number: 6 (lower is better) Translates to: TCSIRFCTGSTS*SASSPWSKSML Trigger: AAGCATTGATTTTGACCAAGGTGAACTAGCCGACCAGGATGTGGATCCAGTACAGAACCTTATTGAGCAGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043204.8 ENSMUST00000162855.2 |
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| CDS TCA 72 bp | TCCAGTGCTCATCATTTGGCATGTTGTCTAATGACTTaGGCATCACTGAAGCATTGTGGACCAGAAGAGACA | + |
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Preference number: 6 (lower is better) Translates to: SSAHHLACCLMT*ASLKHCGPEET Trigger: TGTCTCTTCTGGTCCACAATGCTTCAGTGATGCTCAAGTCATTAGACAACATGCCAAATGATGAGCACTGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043204.8 ENSMUST00000161351.2 |
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| CDS CAA 72 bp | ATGTTGTTGTCCAGTAAACTCAGGTGTTCCATGGTGTaGGCAATTGGGTTAGACAGAGACGACAGTGATGTT | + |
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Preference number: 6 (lower is better) Translates to: MLLSSKLRCSMV*AIGLDRDDSDV Trigger: AACATCACTGTCGTCTCTGTCTAACCCAATTGCCAACACCATGGAACACCTGAGTTTACTGGACAACAACAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043204.8 ENSMUST00000161351.2 |
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| CDS CAA 72 bp | TTCCAGTGCTCATCATTTGGCATGTTGTCTAATGACTaGAGCATCACTGAAGCATTGTGGACCAGAAGAGAC | + |
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Preference number: 6 (lower is better) Translates to: FQCSSFGMLSND*SITEALWTRRD Trigger: GTCTCTTCTGGTCCACAATGCTTCAGTGATGCTCAAGTCATTAGACAACATGCCAAATGATGAGCACTGGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043204.8 ENSMUST00000161351.2 |
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| CDS CAA 72 bp | CTCCATGCTAACAAAACCAATGGATCTTCGTTTCGGTaGTCACTAAGATCTGGAAAACCAGATGTGTCAATC | + |
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Preference number: 6 (lower is better) Translates to: LHANKTNGSSFR*SLRSGKPDVSI Trigger: GATTGACACATCTGGTTTTCCAGATCTTAGTGACAACCGAAACGAAGATCCATTGGTTTTGTTAGCATGGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043204.8 ENSMUST00000162855.2 |
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| CDS CAA 90 bp | TTTGTGCACCTCCATGCTAACAAAACCAATGGATCTTCGTTTCGGTaGTCACTAAGATCTGGAAAACCAGATGTGTCAATCATATCATTC | + |
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Preference number: 6 (lower is better) Translates to: FVHLHANKTNGSSFR*SLRSGKPDVSIISF Trigger: GAATGATATGATTGACACATCTGGTTTTCCAGATCTTAGTGACAACCGAAACGAAGATCCATTGGTTTTGTTAGCATGGAGGTGCACAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043204.8 ENSMUST00000162855.2 |
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| CDS GCA 72 bp | ATTTCCAGCATAAACCCACAGGACAGCCATTTTAGTTaGCTACTATTGCTCAGTATTTCTTCAAACAGTTGT | + |
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Preference number: 6 (lower is better) Translates to: ISSINPQDSHFS*LLLLSISSNSC Trigger: ACAACTGTTTGAAGAAATACTGAGCAATAGTAGGCAACTAAAATGGCTGTCCTGTGGGTTTATGCTGGAAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043204.8 |
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| CDS CAA 72 bp | TTGCCTACTATTGCTCAGTATTTCTTCAAACAGTTGTaGAATTTGCTTAATCTTCTTGCCGTCAGGGTCTAC | + |
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Preference number: 6 (lower is better) Translates to: LPTIAQYFFKQL*NLLNLLAVRVY Trigger: GTAGACCCTGACGGCAAGAAGATTAAGCAAATTCAACAACTGTTTGAAGAAATACTGAGCAATAGTAGGCAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043204.8 |
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| CDS GCA 72 bp | TTCATCAATATAAAATGGGTAAGGAACTTGTCATACTaGCTGGATATAAGATCAACAATAGCCCCTGAGACA | + |
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Preference number: 6 (lower is better) Translates to: FINIKWVRNLSY*LDIRSTIAPET Trigger: TGTCTCAGGGGCTATTGTTGATCTTATATCCAGGCAGTATGACAAGTTCCTTACCCATTTTATATTGATGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043204.8 |
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| CDS CCA 72 bp | AACCAATGGATCTTCGTTTCGGTTGTCACTAAGATCTaGAAAACCAGATGTGTCAATCATATCATTCATCAA | + |
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Preference number: 6 (lower is better) Translates to: NQWIFVSVVTKI*KTRCVNHIIHQ Trigger: TTGATGAATGATATGATTGACACATCTGGTTTTCCAGATCTTAGTGACAACCGAAACGAAGATCCATTGGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043204.8 ENSMUST00000162855.2 |
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